BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1329c Length=664 Score E Sequences producing significant alignments: (Bits) Value gi|15608469|ref|NP_215845.1| ATP-dependent helicase DING [Mycoba... 1313 0.0 gi|289757434|ref|ZP_06516812.1| ATP-dependent helicase dinG [Myc... 1311 0.0 gi|289573995|ref|ZP_06454222.1| ATP-dependent helicase dinG [Myc... 1311 0.0 gi|294994887|ref|ZP_06800578.1| ATP-dependent helicase dinG [Myc... 1310 0.0 gi|308375433|ref|ZP_07443894.2| ATP-dependent helicase dinG [Myc... 1303 0.0 gi|308231810|ref|ZP_07413845.2| ATP-dependent helicase dinG [Myc... 1297 0.0 gi|339294311|gb|AEJ46422.1| ATP-dependent helicase dinG [Mycobac... 1295 0.0 gi|254364226|ref|ZP_04980272.1| ATP-dependent helicase dinG [Myc... 1182 0.0 gi|289745081|ref|ZP_06504459.1| ATP-dependent helicase dinG [Myc... 1155 0.0 gi|308399406|ref|ZP_07493007.2| ATP-dependent helicase dinG [Myc... 1101 0.0 gi|240169488|ref|ZP_04748147.1| hypothetical protein MkanA1_0925... 1004 0.0 gi|289569341|ref|ZP_06449568.1| ATP-dependent helicase dinG [Myc... 974 0.0 gi|342858011|ref|ZP_08714667.1| DeaD/DeaH family protein helicas... 972 0.0 gi|296170271|ref|ZP_06851862.1| ATP-dependent helicase DinG [Myc... 967 0.0 gi|183984040|ref|YP_001852331.1| ATP-dependent helicase DinG [My... 965 0.0 gi|118619141|ref|YP_907473.1| ATP-dependent helicase DinG [Mycob... 962 0.0 gi|254774369|ref|ZP_05215885.1| DeaD/DeaH family protein helicas... 944 0.0 gi|118466949|ref|YP_880784.1| DeaD/DeaH family protein helicase ... 938 0.0 gi|336460964|gb|EGO39845.1| DNA helicase, Rad3 [Mycobacterium av... 936 0.0 gi|41408529|ref|NP_961365.1| DinG [Mycobacterium avium subsp. pa... 934 0.0 gi|145222935|ref|YP_001133613.1| helicase c2 [Mycobacterium gilv... 917 0.0 gi|120405252|ref|YP_955081.1| DEAD/DEAH box helicase domain-cont... 916 0.0 gi|315443398|ref|YP_004076277.1| DNA helicase, Rad3 [Mycobacteri... 916 0.0 gi|333989972|ref|YP_004522586.1| ATP-dependent helicase DinG [My... 905 0.0 gi|126436417|ref|YP_001072108.1| helicase c2 [Mycobacterium sp. ... 905 0.0 gi|108800819|ref|YP_641016.1| helicase c2 [Mycobacterium sp. MCS... 905 0.0 gi|118469948|ref|YP_889167.1| helicase [Mycobacterium smegmatis ... 865 0.0 gi|254819162|ref|ZP_05224163.1| DeaD/DeaH family protein helicas... 828 0.0 gi|169628562|ref|YP_001702211.1| ATP-dependent helicase DinG [My... 804 0.0 gi|331695355|ref|YP_004331594.1| helicase c2 [Pseudonocardia dio... 765 0.0 gi|226360567|ref|YP_002778345.1| ATP-dependent DNA helicase [Rho... 747 0.0 gi|111018448|ref|YP_701420.1| ATP-dependent helicase [Rhodococcu... 747 0.0 gi|226307374|ref|YP_002767334.1| ATP-dependent DNA helicase DinG... 744 0.0 gi|325002243|ref|ZP_08123355.1| helicase c2 [Pseudonocardia sp. P1] 740 0.0 gi|312139198|ref|YP_004006534.1| ATP-dependent DNA helicase [Rho... 737 0.0 gi|229494049|ref|ZP_04387818.1| DeaD/DeaH family helicase [Rhodo... 730 0.0 gi|256375137|ref|YP_003098797.1| helicase c2 [Actinosynnema miru... 729 0.0 gi|326385037|ref|ZP_08206709.1| helicase c2 [Gordonia neofelifae... 721 0.0 gi|291005578|ref|ZP_06563551.1| ATP-dependent DNA helicase-relat... 718 0.0 gi|134097786|ref|YP_001103447.1| ATP-dependent DNA helicase-rela... 717 0.0 gi|300789542|ref|YP_003769833.1| ATP-dependent DNA helicase DinG... 717 0.0 gi|257056900|ref|YP_003134732.1| DNA helicase, Rad3 [Saccharomon... 713 0.0 gi|302529737|ref|ZP_07282079.1| ATP-dependent helicase [Streptom... 711 0.0 gi|271967790|ref|YP_003341986.1| ATP-dependent helicase [Strepto... 705 0.0 gi|19553718|ref|NP_601720.1| Rad3-related DNA helicase [Coryneba... 704 0.0 gi|344043845|gb|EGV39532.1| Rad3-related DNA helicase [Corynebac... 703 0.0 gi|340531198|gb|AEK46403.1| ATP-dependent DNA helicase DinG [Amy... 701 0.0 gi|333921291|ref|YP_004494872.1| putative ATP-dependent DNA heli... 690 0.0 gi|296270176|ref|YP_003652808.1| helicase c2 [Thermobispora bisp... 689 0.0 gi|54023050|ref|YP_117292.1| putative ATP-dependent helicase [No... 688 0.0 >gi|15608469|ref|NP_215845.1| ATP-dependent helicase DING [Mycobacterium tuberculosis H37Rv] gi|15840784|ref|NP_335821.1| ATP-dependent helicase DinG [Mycobacterium tuberculosis CDC1551] gi|31792525|ref|NP_855018.1| ATP-dependent helicase dinG-like protein [Mycobacterium bovis AF2122/97] 44 more sequence titles Length=664 Score = 1313 bits (3397), Expect = 0.0, Method: Compositional matrix adjust. Identities = 663/664 (99%), Positives = 664/664 (100%), Gaps = 0/664 (0%) Query 1 VSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 +SESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL Sbjct 1 MSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 Query 61 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC Sbjct 61 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 Query 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR Sbjct 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 Query 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH Sbjct 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 Query 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD Sbjct 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 Query 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI Sbjct 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 Query 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI Sbjct 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 Query 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA Sbjct 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 Query 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG Sbjct 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 Query 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL Sbjct 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 Query 601 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 660 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD Sbjct 601 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 660 Query 661 AKAH 664 AKAH Sbjct 661 AKAH 664 >gi|289757434|ref|ZP_06516812.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis T85] gi|298524836|ref|ZP_07012245.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis 94_M4241A] gi|289712998|gb|EFD77010.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis T85] gi|298494630|gb|EFI29924.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis 94_M4241A] gi|326902952|gb|EGE49885.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis W-148] Length=664 Score = 1311 bits (3393), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/664 (99%), Positives = 663/664 (99%), Gaps = 0/664 (0%) Query 1 VSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 +SESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL Sbjct 1 MSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 Query 61 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 VPAIIRALCDDAPVVVSTA IALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC Sbjct 61 VPAIIRALCDDAPVVVSTAKIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 Query 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR Sbjct 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 Query 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH Sbjct 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 Query 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD Sbjct 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 Query 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI Sbjct 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 Query 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI Sbjct 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 Query 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA Sbjct 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 Query 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG Sbjct 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 Query 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL Sbjct 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 Query 601 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 660 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD Sbjct 601 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 660 Query 661 AKAH 664 AKAH Sbjct 661 AKAH 664 >gi|289573995|ref|ZP_06454222.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis K85] gi|289538426|gb|EFD43004.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis K85] Length=664 Score = 1311 bits (3392), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/664 (99%), Positives = 663/664 (99%), Gaps = 0/664 (0%) Query 1 VSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 +SESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL Sbjct 1 MSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 Query 61 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 VPAIIRALCDDAPVVVSTATIALQ QLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC Sbjct 61 VPAIIRALCDDAPVVVSTATIALQHQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 Query 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR Sbjct 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 Query 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH Sbjct 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 Query 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD Sbjct 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 Query 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI Sbjct 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 Query 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI Sbjct 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 Query 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA Sbjct 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 Query 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG Sbjct 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 Query 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL Sbjct 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 Query 601 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 660 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD Sbjct 601 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 660 Query 661 AKAH 664 AKAH Sbjct 661 AKAH 664 >gi|294994887|ref|ZP_06800578.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis 210] Length=664 Score = 1310 bits (3389), Expect = 0.0, Method: Compositional matrix adjust. Identities = 661/664 (99%), Positives = 663/664 (99%), Gaps = 0/664 (0%) Query 1 VSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 +SESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL Sbjct 1 MSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 Query 61 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 VPAIIRALCDDAPVVVSTA IALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC Sbjct 61 VPAIIRALCDDAPVVVSTAKIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 Query 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR Sbjct 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 Query 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH Sbjct 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 Query 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD Sbjct 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 Query 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI Sbjct 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 Query 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI Sbjct 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 Query 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA Sbjct 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 Query 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG Sbjct 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 Query 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL Sbjct 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 Query 601 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 660 AQGSGRLLRRVT+RGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD Sbjct 601 AQGSGRLLRRVTNRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 660 Query 661 AKAH 664 AKAH Sbjct 661 AKAH 664 >gi|308375433|ref|ZP_07443894.2| ATP-dependent helicase dinG [Mycobacterium tuberculosis SUMu007] gi|308346327|gb|EFP35178.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis SUMu007] Length=658 Score = 1303 bits (3371), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/658 (100%), Positives = 658/658 (100%), Gaps = 0/658 (0%) Query 7 MSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIR 66 MSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIR Sbjct 1 MSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIR 60 Query 67 ALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHN 126 ALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHN Sbjct 61 ALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHN 120 Query 127 SVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVS 186 SVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVS Sbjct 121 SVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVS 180 Query 187 VSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVD 246 VSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVD Sbjct 181 VSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVD 240 Query 247 EAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRI 306 EAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRI Sbjct 241 EAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRI 300 Query 307 DCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAP 366 DCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAP Sbjct 301 DCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAP 360 Query 367 AIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDA 426 AIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDA Sbjct 361 AIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDA 420 Query 427 MATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAA 486 MATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAA Sbjct 421 MATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAA 480 Query 487 GGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQ 546 GGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQ Sbjct 481 GGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQ 540 Query 547 GVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGR 606 GVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGR Sbjct 541 GVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGR 600 Query 607 LLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADAKAH 664 LLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADAKAH Sbjct 601 LLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADAKAH 658 >gi|308231810|ref|ZP_07413845.2| ATP-dependent helicase dinG [Mycobacterium tuberculosis SUMu001] gi|308369769|ref|ZP_07418995.2| ATP-dependent helicase dinG [Mycobacterium tuberculosis SUMu002] gi|308370689|ref|ZP_07422381.2| ATP-dependent helicase dinG [Mycobacterium tuberculosis SUMu003] 15 more sequence titles Length=656 Score = 1297 bits (3356), Expect = 0.0, Method: Compositional matrix adjust. Identities = 655/656 (99%), Positives = 656/656 (100%), Gaps = 0/656 (0%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 +PELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL Sbjct 1 MPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 60 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV Sbjct 61 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 120 Query 129 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 188 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS Sbjct 121 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 180 Query 189 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 248 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA Sbjct 181 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 240 Query 249 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 308 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC Sbjct 241 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 300 Query 309 LDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI 368 LDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI Sbjct 301 LDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI 360 Query 369 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA 428 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA Sbjct 361 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA 420 Query 429 TAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGG 488 TAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGG Sbjct 421 TAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGG 480 Query 489 RTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGV 548 RTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGV Sbjct 481 RTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGV 540 Query 549 DVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLL 608 DVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLL Sbjct 541 DVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLL 600 Query 609 RRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADAKAH 664 RRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADAKAH Sbjct 601 RRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADAKAH 656 >gi|339294311|gb|AEJ46422.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis CCDC5079] gi|339297950|gb|AEJ50060.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis CCDC5180] Length=656 Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust. Identities = 654/656 (99%), Positives = 655/656 (99%), Gaps = 0/656 (0%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 +PELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL Sbjct 1 MPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 60 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 CDDAPVVVSTA IALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV Sbjct 61 CDDAPVVVSTAKIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 120 Query 129 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 188 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS Sbjct 121 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 180 Query 189 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 248 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA Sbjct 181 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 240 Query 249 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 308 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC Sbjct 241 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 300 Query 309 LDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI 368 LDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI Sbjct 301 LDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI 360 Query 369 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA 428 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA Sbjct 361 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA 420 Query 429 TAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGG 488 TAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGG Sbjct 421 TAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGG 480 Query 489 RTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGV 548 RTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGV Sbjct 481 RTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGV 540 Query 549 DVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLL 608 DVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLL Sbjct 541 DVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLL 600 Query 609 RRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADAKAH 664 RRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADAKAH Sbjct 601 RRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADAKAH 656 >gi|254364226|ref|ZP_04980272.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis str. Haarlem] gi|134149740|gb|EBA41785.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis str. Haarlem] Length=662 Score = 1182 bits (3058), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/664 (96%), Positives = 635/664 (96%), Gaps = 2/664 (0%) Query 1 VSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 +SESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL Sbjct 1 MSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 Query 61 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC Sbjct 61 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 Query 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR Sbjct 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 Query 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH Sbjct 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 Query 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD Sbjct 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 Query 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI Sbjct 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 Query 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI Sbjct 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 Query 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA Sbjct 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 Query 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG Sbjct 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 Query 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 TLSLWQGVDVPGPSLS V IDRIPFPR P AR +ARG A+ Sbjct 541 TLSLWQGVDVPGPSLSCV-IDRIPFPRRTIP-ADARSVRWSARGARLMTVAASHAGGAAG 598 Query 601 AQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 660 + GRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD Sbjct 599 HRNPGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARAD 658 Query 661 AKAH 664 AKAH Sbjct 659 AKAH 662 >gi|289745081|ref|ZP_06504459.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis 02_1987] gi|289685609|gb|EFD53097.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis 02_1987] Length=686 Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 612/661 (93%), Positives = 622/661 (95%), Gaps = 12/661 (1%) Query 1 VSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 +SESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL Sbjct 1 MSESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYL 60 Query 61 VPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 VPAIIRALCDDAPVVVSTA IALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC Sbjct 61 VPAIIRALCDDAPVVVSTAKIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLC 120 Query 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR Sbjct 121 LNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDR 180 Query 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH Sbjct 181 SWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEH 240 Query 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD Sbjct 241 RLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHD 300 Query 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI Sbjct 301 ARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRI 360 Query 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI Sbjct 361 LASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 Query 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA Sbjct 421 GGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIA 480 Query 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG Sbjct 481 ELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFG 540 Query 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLL 600 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAAS A L Sbjct 541 TLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASRACSLS 600 Query 601 AQGSGRLLR---------RVTDRGVVAVLDSRMATARYGEFL-RASLPP-FWQTTNATQV 649 A G+G +R R + ++ + + FL + LP F +TTNATQV Sbjct 601 A-GTGTGIRAGCYGASPDRRAGKYMLVEFTDGLPPRLWRNFLAKPPLPALFGKTTNATQV 659 Query 650 R 650 R Sbjct 660 R 660 >gi|308399406|ref|ZP_07493007.2| ATP-dependent helicase dinG [Mycobacterium tuberculosis SUMu012] gi|308366428|gb|EFP55279.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis SUMu012] Length=673 Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust. Identities = 557/558 (99%), Positives = 558/558 (100%), Gaps = 0/558 (0%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 +PELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL Sbjct 1 MPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 60 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV Sbjct 61 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 120 Query 129 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 188 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS Sbjct 121 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 180 Query 189 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 248 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA Sbjct 181 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 240 Query 249 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 308 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC Sbjct 241 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 300 Query 309 LDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI 368 LDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI Sbjct 301 LDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI 360 Query 369 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA 428 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA Sbjct 361 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA 420 Query 429 TAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGG 488 TAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGG Sbjct 421 TAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGG 480 Query 489 RTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGV 548 RTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGV Sbjct 481 RTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGV 540 Query 549 DVPGPSLSLVLIDRIPFP 566 DVPGPSLSLVLIDRIPFP Sbjct 541 DVPGPSLSLVLIDRIPFP 558 >gi|240169488|ref|ZP_04748147.1| hypothetical protein MkanA1_09256 [Mycobacterium kansasii ATCC 12478] Length=657 Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust. Identities = 548/657 (84%), Positives = 594/657 (91%), Gaps = 5/657 (0%) Query 7 MSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIR 66 MSV ELLA+AVAALGG+ RRGQ EMA AV AF TG+HLVVQAGTGTGKSLAYLVPAI+R Sbjct 1 MSVQELLAVAVAALGGSERRGQLEMANAVEQAFTTGQHLVVQAGTGTGKSLAYLVPAIVR 60 Query 67 ALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHN 126 A+ DD PVVVSTATIALQRQLVDRDLP+L D+L ALPRRP+FALLKGR NYLCLNK+HN Sbjct 61 AVGDDGPVVVSTATIALQRQLVDRDLPRLADALATALPRRPQFALLKGRGNYLCLNKVHN 120 Query 127 SVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVS 186 SD E PQEELF+P+AVTALGRDVQRLT WA+TT SGDRDDLKPGV DRSWSQVS Sbjct 121 GSATSDPAGE-PQEELFNPMAVTALGRDVQRLTEWAATTDSGDRDDLKPGVADRSWSQVS 179 Query 187 VSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVD 246 VSAREC+GVARCPFGS+CFSERAR AG AD+VVTNHALLA+DAVAES+VLPEHRLLVVD Sbjct 180 VSARECIGVARCPFGSQCFSERARARAGAADIVVTNHALLAVDAVAESSVLPEHRLLVVD 239 Query 247 EAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRI 306 EAHELADRVTSVA AELTSATLG+AARRI RLV P+V +RL+AASAT SSAIHDA PGRI Sbjct 240 EAHELADRVTSVATAELTSATLGVAARRIARLVGPEVLERLEAASATLSSAIHDASPGRI 299 Query 307 DCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAP 366 D LDDE+ATYL+ALRDAA AARSAID+ SD AS RAEA A LT+I DTASRIL SF P Sbjct 300 DYLDDELATYLTALRDAAGAARSAIDSSSDAKAASARAEAAAALTDICDTASRILTSFTP 359 Query 367 AIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDA 426 AIP+R+DVVWL+HE+N S R+VLRVAPLSVA+LLA QVF R+T VLTSATLTIGG+FDA Sbjct 360 AIPERTDVVWLDHEENRGSPRSVLRVAPLSVADLLARQVFDRSTAVLTSATLTIGGTFDA 419 Query 427 MATAWGLTADTP----WRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAEL 482 MA AWGLT+D P WRGLDVGSPFQHAKSGILYVAAHLP PGRDG+GSAEQLTEIAEL Sbjct 420 MAAAWGLTSDPPSDTGWRGLDVGSPFQHAKSGILYVAAHLPSPGRDGTGSAEQLTEIAEL 479 Query 483 ITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTL 542 ITAAGGRTLGLFSSMRAARAA EAMR+RLSTPVLCQGDD+TS LVE+F+AD ATSLFGTL Sbjct 480 ITAAGGRTLGLFSSMRAARAAAEAMRDRLSTPVLCQGDDTTSALVEQFSADPATSLFGTL 539 Query 543 SLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQ 602 SLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAA+HAALLLAQ Sbjct 540 SLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAANHAALLLAQ 599 Query 603 GSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARA 659 G+GRLLRRVTDRGVVAVLDSRM TARYG++LRASLPPFWQTT+ATQVRAAL+RL+ A Sbjct 600 GAGRLLRRVTDRGVVAVLDSRMVTARYGDYLRASLPPFWQTTSATQVRAALQRLSAA 656 >gi|289569341|ref|ZP_06449568.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis T17] gi|289543095|gb|EFD46743.1| ATP-dependent helicase dinG [Mycobacterium tuberculosis T17] Length=491 Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust. Identities = 490/491 (99%), Positives = 491/491 (100%), Gaps = 0/491 (0%) Query 57 LAYLVPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRR 116 +AYLVPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRR Sbjct 1 MAYLVPAIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRR 60 Query 117 NYLCLNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPG 176 NYLCLNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPG Sbjct 61 NYLCLNKIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPG 120 Query 177 VGDRSWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAV 236 VGDRSWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAV Sbjct 121 VGDRSWSQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAV 180 Query 237 LPEHRLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSS 296 LPEHRLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSS Sbjct 181 LPEHRLLVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSS 240 Query 297 AIHDARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDT 356 AIHDARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDT Sbjct 241 AIHDARPGRIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDT 300 Query 357 ASRILASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSA 416 ASRILASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSA Sbjct 301 ASRILASFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSA 360 Query 417 TLTIGGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQL 476 TLTIGGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQL Sbjct 361 TLTIGGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQL 420 Query 477 TEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAAT 536 TEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAAT Sbjct 421 TEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAAT 480 Query 537 SLFGTLSLWQG 547 SLFGTLSLWQG Sbjct 481 SLFGTLSLWQG 491 >gi|342858011|ref|ZP_08714667.1| DeaD/DeaH family protein helicase [Mycobacterium colombiense CECT 3035] gi|342135344|gb|EGT88510.1| DeaD/DeaH family protein helicase [Mycobacterium colombiense CECT 3035] Length=665 Score = 972 bits (2514), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/656 (83%), Positives = 581/656 (89%), Gaps = 5/656 (0%) Query 11 ELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCD 70 ELLA AVAALGG+ R GQQEMAAAVA AF T EHLVVQAGTGTGKSLAYLVPAI+ AL D Sbjct 3 ELLATAVAALGGSERVGQQEMAAAVARAFATEEHLVVQAGTGTGKSLAYLVPAIVHALDD 62 Query 71 DAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTA 130 D+PVVVSTATIALQRQLVDRDLP+LVD+L +ALPRRP+FALLKGRRNYLCLNKIHN A Sbjct 63 DSPVVVSTATIALQRQLVDRDLPRLVDALVDALPRRPQFALLKGRRNYLCLNKIHNGGAA 122 Query 131 SDHDDE-RPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSA 189 D + RPQEELF+P+AV+ALGRDVQRLT WAS+T SGDRDDLKPGV DRSWSQVSVSA Sbjct 123 DGDDGDDRPQEELFNPMAVSALGRDVQRLTEWASSTESGDRDDLKPGVPDRSWSQVSVSA 182 Query 190 RECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAH 249 RECLGVARCPFG+ECFSERAR AG ADVVVTNHALLAIDAVAESAVLPEH LLVVDEAH Sbjct 183 RECLGVARCPFGTECFSERARAQAGRADVVVTNHALLAIDAVAESAVLPEHALLVVDEAH 242 Query 250 ELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCL 309 EL DRVTSVA AELTSA+LG+AARRI RLVDP++ QRL+A +A F+S IHD PGRID L Sbjct 243 ELVDRVTSVATAELTSASLGVAARRIARLVDPELVQRLEATTANFASVIHDGAPGRIDRL 302 Query 310 DDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAIP 369 DDE+ATYL+ALRD A+AARSAIDT +D AS RAEA A L+EISDTASR+L SF PAIP Sbjct 303 DDELATYLAALRDVATAARSAIDTTNDPKAASARAEAVAALSEISDTASRVLESFGPAIP 362 Query 370 DRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMAT 429 DR+DVVWLEHE+ S+R VLRVAPLSVA LL ++VF+R+T VLTSATLTIGGSFDAMAT Sbjct 363 DRTDVVWLEHEEIRGSSRPVLRVAPLSVAGLLRSRVFSRSTVVLTSATLTIGGSFDAMAT 422 Query 430 AWGLTA----DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITA 485 AWGLTA D WRGLDVGSPFQHAK+GILYVAAHLPPPGRDG+GSAEQL+EIA LI A Sbjct 423 AWGLTAEDDDDARWRGLDVGSPFQHAKAGILYVAAHLPPPGRDGTGSAEQLSEIAGLIAA 482 Query 486 AGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLW 545 A GRTLGLFSSMRAARAA EAMRERLSTPVLCQGDDSTS LVE+F+AD TSLFGTLSLW Sbjct 483 ADGRTLGLFSSMRAARAAAEAMRERLSTPVLCQGDDSTSALVEQFSADPQTSLFGTLSLW 542 Query 546 QGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSG 605 QGVDVPGPSLSLVLIDRIPFPRPDDPLL ARQRAVAARGGNGFM VAA+HAALLLAQGSG Sbjct 543 QGVDVPGPSLSLVLIDRIPFPRPDDPLLGARQRAVAARGGNGFMAVAANHAALLLAQGSG 602 Query 606 RLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRLARADA 661 RLLRRVTDRGVVAVLDSRM TA YG +LRASLPPFWQTTN QVR AL+RL A A Sbjct 603 RLLRRVTDRGVVAVLDSRMVTAGYGGYLRASLPPFWQTTNGEQVRQALQRLRTAPA 658 >gi|296170271|ref|ZP_06851862.1| ATP-dependent helicase DinG [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894994|gb|EFG74713.1| ATP-dependent helicase DinG [Mycobacterium parascrofulaceum ATCC BAA-614] Length=674 Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/659 (83%), Positives = 585/659 (89%), Gaps = 9/659 (1%) Query 7 MSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIR 66 MSVP LLA AVAALGG+ R GQ EMA AVA AF TGEHLVVQAGTGTGKSLAYLVPAI+R Sbjct 1 MSVPGLLATAVAALGGSERGGQLEMANAVAQAFATGEHLVVQAGTGTGKSLAYLVPAIVR 60 Query 67 ALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHN 126 A+ DD+PVVVSTATIALQRQLVDRDLP+L+DS+ + LPRRP+FALLKGRRNYLCLNKIHN Sbjct 61 AIDDDSPVVVSTATIALQRQLVDRDLPRLIDSIADTLPRRPQFALLKGRRNYLCLNKIHN 120 Query 127 SVTASDHDDE-RPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQV 185 +D DD RPQEELFDP+A TALGRDVQRLTAWASTT SGDRDDLKPGV DRSWSQV Sbjct 121 GGAEADEDDGGRPQEELFDPMAATALGRDVQRLTAWASTTESGDRDDLKPGVPDRSWSQV 180 Query 186 SVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVV 245 SVSAREC+GVARCPFGSECFSERARG AG AD+VVTNHALLAIDAVAESAVLPEH LLVV Sbjct 181 SVSARECVGVARCPFGSECFSERARGRAGAADIVVTNHALLAIDAVAESAVLPEHALLVV 240 Query 246 DEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGR 305 DEAHEL DRVTSVA ELT A LG+AARRI RLV+P++TQRL+AASA F++A+HD PGR Sbjct 241 DEAHELVDRVTSVATGELTPAALGVAARRIARLVNPELTQRLEAASANFAAAVHDGTPGR 300 Query 306 IDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFA 365 ID LD+E+ATYL+ALRDAASAARSAIDT SD A+ RAEA A L+EISDTASR+L SFA Sbjct 301 IDRLDEELATYLTALRDAASAARSAIDTTSDAKAAAARAEAVAGLSEISDTASRVLTSFA 360 Query 366 PAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFD 425 PAI DR++VVWL+HED S R VLRVAPLSVA LL +VF+R+TTVLTSATLTIGGSFD Sbjct 361 PAITDRTEVVWLDHEDTRGSMRPVLRVAPLSVAGLLRDRVFSRSTTVLTSATLTIGGSFD 420 Query 426 AMATAWGLTA--------DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLT 477 AMA AWGLTA D WRG+DVGSPFQHAK+GILYVAAHLPPPGRDG+GSAEQLT Sbjct 421 AMAAAWGLTAPGAGQEPKDVRWRGVDVGSPFQHAKAGILYVAAHLPPPGRDGTGSAEQLT 480 Query 478 EIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATS 537 EIAELITAAGGRTLGLFSSMRAARAA EAMRERLSTPVLCQGDDSTS LVE+F+AD TS Sbjct 481 EIAELITAAGGRTLGLFSSMRAARAAAEAMRERLSTPVLCQGDDSTSALVEQFSADPQTS 540 Query 538 LFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAA 597 LFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLL ARQR+VAARGGNGFM VAASHAA Sbjct 541 LFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLGARQRSVAARGGNGFMAVAASHAA 600 Query 598 LLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 LLLAQGSGRLLRRVTDRGVVAVLDSRM TA YG +L ASLPPFWQTTNA QVRAAL RL Sbjct 601 LLLAQGSGRLLRRVTDRGVVAVLDSRMVTAGYGGYLSASLPPFWQTTNAAQVRAALERL 659 >gi|183984040|ref|YP_001852331.1| ATP-dependent helicase DinG [Mycobacterium marinum M] gi|183177366|gb|ACC42476.1| ATP-dependent helicase DinG [Mycobacterium marinum M] Length=673 Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/668 (81%), Positives = 584/668 (88%), Gaps = 13/668 (1%) Query 6 SMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAII 65 S SVPELLAIAVAA+GG+ R GQ EMA AVA +F++GEHLVVQAGTGTGKSLAYL+PA++ Sbjct 4 SASVPELLAIAVAAVGGSERPGQVEMADAVARSFQSGEHLVVQAGTGTGKSLAYLIPAVV 63 Query 66 RALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIH 125 RAL D+APVVVSTATIALQRQLVDRDLP+L D+L +ALPR+P+FALLKGRRNYLCLNKIH Sbjct 64 RALDDNAPVVVSTATIALQRQLVDRDLPRLADALADALPRQPRFALLKGRRNYLCLNKIH 123 Query 126 NSVTASDHD-DERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQ 184 + + D + D++PQEELF+P+A TALGRDV RLT WASTT +GDRDDLKPGV +RSWSQ Sbjct 124 SDGSTGDPEADDQPQEELFNPMAATALGRDVARLTEWASTTDTGDRDDLKPGVAERSWSQ 183 Query 185 VSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLV 244 VSVSAREC+GVARCP+GSECFSERAR AG AD+VVTNHALLAIDAVAES VLPEH LLV Sbjct 184 VSVSARECIGVARCPYGSECFSERARSRAGGADIVVTNHALLAIDAVAESTVLPEHSLLV 243 Query 245 VDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPG 304 VDEAHEL DRVTSVA AELTSA L A RRI RLV P++TQRL AAS TF+SAIHD PG Sbjct 244 VDEAHELTDRVTSVATAELTSAALSAATRRIARLVSPELTQRLDAASTTFASAIHDGTPG 303 Query 305 RIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASF 364 RID LDDE+ATYL+ALRDAA+AARSAI SD AS RAE+ A L +ISDTASRIL SF Sbjct 304 RIDHLDDELATYLTALRDAAAAARSAISGTSDAAAASARAESAAALADISDTASRILTSF 363 Query 365 APAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSF 424 P IPDR+DVVWLEHE+N S RAVLRVAPLSVA LLA VF+R+TTVLTSATLT+GGSF Sbjct 364 TPPIPDRTDVVWLEHEENRGSPRAVLRVAPLSVAGLLAATVFSRSTTVLTSATLTVGGSF 423 Query 425 DAMATAWGLTAD------------TPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGS 472 DAMATAWGLT TPWRGLDVGSPF HAKSGILYVAAHLPPPGR+G+ + Sbjct 424 DAMATAWGLTEPRTDPKSEAAEQRTPWRGLDVGSPFHHAKSGILYVAAHLPPPGREGAAA 483 Query 473 AEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTA 532 AEQLTEIAELITAAGGRTLGLFSSMRAARAA EAMRERLSTPVLCQGDDSTS LVE+F Sbjct 484 AEQLTEIAELITAAGGRTLGLFSSMRAARAAAEAMRERLSTPVLCQGDDSTSALVEQFAD 543 Query 533 DAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVA 592 DAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFM VA Sbjct 544 DAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMAVA 603 Query 593 ASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAA 652 A+HAALLLAQG+GRLLRRVTDRGVVAVLDSRMATARYG +LR SLPPFWQTTN TQVR A Sbjct 604 ANHAALLLAQGAGRLLRRVTDRGVVAVLDSRMATARYGSYLRDSLPPFWQTTNGTQVRQA 663 Query 653 LRRLARAD 660 L+RLA D Sbjct 664 LQRLAELD 671 >gi|118619141|ref|YP_907473.1| ATP-dependent helicase DinG [Mycobacterium ulcerans Agy99] gi|118571251|gb|ABL06002.1| ATP-dependent helicase DinG [Mycobacterium ulcerans Agy99] Length=673 Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/668 (81%), Positives = 583/668 (88%), Gaps = 13/668 (1%) Query 6 SMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAII 65 S SVPELLAIAVAA+GG+ R GQ EMA AVA +F++GEHLVVQAGTGTGKSLAYL+PA++ Sbjct 4 SASVPELLAIAVAAVGGSERPGQVEMADAVARSFQSGEHLVVQAGTGTGKSLAYLIPAVV 63 Query 66 RALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIH 125 RAL D+APVVVSTATIALQRQLVDRDLP+L D+L +ALPR+P+FALLKGRRNYLCLNKIH Sbjct 64 RALDDNAPVVVSTATIALQRQLVDRDLPRLADALADALPRQPRFALLKGRRNYLCLNKIH 123 Query 126 NSVTASDHD-DERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQ 184 + + D + D++PQEELF+P+A TALGRDV RLT WASTT +GDRDDLKPGV +RSWSQ Sbjct 124 SDGSTGDPEADDQPQEELFNPMAATALGRDVARLTEWASTTDTGDRDDLKPGVAERSWSQ 183 Query 185 VSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLV 244 VSVSAREC+GVARCP+ SECFSERAR AG AD+VVTNHALLAIDAVAES VLPEH LLV Sbjct 184 VSVSARECIGVARCPYRSECFSERARSRAGGADIVVTNHALLAIDAVAESTVLPEHSLLV 243 Query 245 VDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPG 304 VDEAHEL DRVTSVA AELTSA L A RRI RLV P++TQRL AAS TF+SAIHD PG Sbjct 244 VDEAHELTDRVTSVATAELTSAALSAATRRIARLVSPELTQRLDAASTTFASAIHDGTPG 303 Query 305 RIDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASF 364 RID LDDE+ATYL+ALRDAA+AARSAI SD AS RAE+ A L +ISDTASRIL SF Sbjct 304 RIDHLDDELATYLTALRDAAAAARSAISGTSDAAAASARAESAAALADISDTASRILTSF 363 Query 365 APAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSF 424 P IPDR+DVVWLEHE+N S RAVLRVAPLSVA LLA VF+R+TTVLTSATLT+GGSF Sbjct 364 TPPIPDRTDVVWLEHEENRGSPRAVLRVAPLSVAGLLAATVFSRSTTVLTSATLTVGGSF 423 Query 425 DAMATAWGLTAD------------TPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGS 472 DAMATAWGLT TPWRGLDVGSPF HAKSGILYVAAHLPPPGR+G+ + Sbjct 424 DAMATAWGLTEPRTDPKSEAAEQRTPWRGLDVGSPFHHAKSGILYVAAHLPPPGREGAAA 483 Query 473 AEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTA 532 AEQLTEIAELITAAGGRTLGLFSSMRAARAA EAMRERLSTPVLCQGDDSTS LVE+F Sbjct 484 AEQLTEIAELITAAGGRTLGLFSSMRAARAAAEAMRERLSTPVLCQGDDSTSALVEQFAD 543 Query 533 DAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVA 592 DAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFM VA Sbjct 544 DAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMAVA 603 Query 593 ASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAA 652 A+HAALLLAQG+GRLLRRVTDRGVVAVLDSRMATARYG +LR SLPPFWQTTN TQVR A Sbjct 604 ANHAALLLAQGAGRLLRRVTDRGVVAVLDSRMATARYGSYLRDSLPPFWQTTNGTQVRQA 663 Query 653 LRRLARAD 660 L+RLA D Sbjct 664 LQRLAELD 671 >gi|254774369|ref|ZP_05215885.1| DeaD/DeaH family protein helicase [Mycobacterium avium subsp. avium ATCC 25291] Length=663 Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust. Identities = 535/653 (82%), Positives = 581/653 (89%), Gaps = 5/653 (0%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 +PELLA AVAALGG+ R GQQ+MAAAVA AF+TG HLVVQAGTGTGKSLAYLVPAI+ AL Sbjct 1 MPELLATAVAALGGSEREGQQQMAAAVAQAFDTGRHLVVQAGTGTGKSLAYLVPAIVHAL 60 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 DD+PVVVSTATIALQRQLVDRDLP+L+DSL ALPRRP+FALLKGRRNYLCLNKIHN Sbjct 61 RDDSPVVVSTATIALQRQLVDRDLPRLIDSLAAALPRRPQFALLKGRRNYLCLNKIHNGG 120 Query 129 TASDHDD-ERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 A + +RPQEELF+P+AV+ALGRDVQRLT WAS+T SGDRDDLKPGV DRSWSQVSV Sbjct 121 PADGEEAADRPQEELFNPMAVSALGRDVQRLTEWASSTDSGDRDDLKPGVPDRSWSQVSV 180 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 SARECLGVARCPFG+ECFSERAR AG ADVVVTNHALLAIDAV++SA+LPEH LLV+DE Sbjct 181 SARECLGVARCPFGAECFSERARSRAGQADVVVTNHALLAIDAVSDSAILPEHALLVIDE 240 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVTSVA AELTSA LG+AARRI RLV P++ QRL+A +A F++AIHD PGRID Sbjct 241 AHELVDRVTSVATAELTSAALGVAARRIGRLVSPELVQRLEATTANFAAAIHDGTPGRID 300 Query 308 CLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPA 367 LD+E+ATYL+ALRDAASAARSAIDT SD AS RAEA A L+EISDTASR+LASF PA Sbjct 301 RLDEELATYLAALRDAASAARSAIDTTSDPKAASARAEAVAALSEISDTASRVLASFGPA 360 Query 368 IPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAM 427 IPDR+DVVWL+HEDN + R VLRVAPLSVA+LL +VF+R+T VLTSATLTIGGSFDAM Sbjct 361 IPDRTDVVWLDHEDNRGAMRPVLRVAPLSVADLLRDRVFSRSTVVLTSATLTIGGSFDAM 420 Query 428 ATAWGLTA----DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELI 483 A AWGL D PWRGLDVGSPFQHAK+GILYVAAHLPPPGRDG GSAEQLTEIAELI Sbjct 421 AAAWGLKGPDGDDPPWRGLDVGSPFQHAKAGILYVAAHLPPPGRDGVGSAEQLTEIAELI 480 Query 484 TAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLS 543 TAA GRTLGLFSSMRAARAA EAMR+RLSTPVLCQGDDSTS LVE+F A+ TSLFGTLS Sbjct 481 TAADGRTLGLFSSMRAARAAAEAMRDRLSTPVLCQGDDSTSALVEQFRAEPQTSLFGTLS 540 Query 544 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQG 603 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLL ARQRAVAARGGNGFM VAASHAALLLAQG Sbjct 541 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLLGARQRAVAARGGNGFMAVAASHAALLLAQG 600 Query 604 SGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 SGRLLRRV+DRGVVAVLDSRM TA YG +LRASLPPFWQTTN QVRAAL+RL Sbjct 601 SGRLLRRVSDRGVVAVLDSRMTTAGYGGYLRASLPPFWQTTNGAQVRAALQRL 653 >gi|118466949|ref|YP_880784.1| DeaD/DeaH family protein helicase [Mycobacterium avium 104] gi|118168236|gb|ABK69133.1| DeaD/DeaH family protein helicase [Mycobacterium avium 104] Length=663 Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/653 (83%), Positives = 584/653 (90%), Gaps = 5/653 (0%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 +PELLA AVAALGG+ R GQQ+MAAAVA AF+TG HLVVQAGTGTGKSLAYLVPAI+ AL Sbjct 1 MPELLATAVAALGGSEREGQQQMAAAVAQAFDTGRHLVVQAGTGTGKSLAYLVPAIVHAL 60 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 DD+PVVVSTATIALQRQLVDRDLP+L+DSL ALPRRP+FALLKGRRNYLCLNKIHN Sbjct 61 RDDSPVVVSTATIALQRQLVDRDLPRLIDSLAAALPRRPQFALLKGRRNYLCLNKIHNGG 120 Query 129 TASDHDD-ERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 A + +RPQEELF+P+AV+ALGRDVQRLT WAS+T SGDRDDLKPGV DRSWSQVSV Sbjct 121 PADGEEAADRPQEELFNPMAVSALGRDVQRLTEWASSTDSGDRDDLKPGVPDRSWSQVSV 180 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 SARECLGVARCPFG+ECFSERAR AG ADVVVTNHALLAIDAV++SA+LPEH LLV+DE Sbjct 181 SARECLGVARCPFGAECFSERARSRAGQADVVVTNHALLAIDAVSDSAILPEHALLVIDE 240 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVTSVA AELTSA LG+AARRI RLV P++ QRL+A +ATF++AIHD PGRID Sbjct 241 AHELVDRVTSVATAELTSAALGIAARRIGRLVSPELVQRLEATTATFAAAIHDGTPGRID 300 Query 308 CLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPA 367 LDDE+ATYL+ALRDAASAARSAIDT SD AS RAEA A L+EISDTASR+LASF PA Sbjct 301 RLDDELATYLAALRDAASAARSAIDTTSDPKAASARAEAVAALSEISDTASRVLASFGPA 360 Query 368 IPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAM 427 IPDR+DVVWL+HEDN + R VLRVAPLSVA+LL +VF+R+T VLTSATLTIGGSFDAM Sbjct 361 IPDRTDVVWLDHEDNRGAMRPVLRVAPLSVADLLRDRVFSRSTVVLTSATLTIGGSFDAM 420 Query 428 ATAWGLTA----DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELI 483 A AWGL D PWRGLDVGSPFQHAK+GILYVAAHLPPPGRDG GSAEQLTEIAELI Sbjct 421 AAAWGLKGPDGDDPPWRGLDVGSPFQHAKAGILYVAAHLPPPGRDGVGSAEQLTEIAELI 480 Query 484 TAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLS 543 TAA GRTLGLFSSMRAARAA EAMR+RLSTPVLCQGDDSTS LVE+F+A+ TSLFGTLS Sbjct 481 TAADGRTLGLFSSMRAARAAAEAMRDRLSTPVLCQGDDSTSALVEQFSAEPQTSLFGTLS 540 Query 544 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQG 603 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLL ARQRAVAARGGNGFM VAASHAALLLAQG Sbjct 541 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLLGARQRAVAARGGNGFMAVAASHAALLLAQG 600 Query 604 SGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 SGRLLRRV+DRGVVAVLDSRMATA YG +LRASLPPFWQTTN QVRAAL+RL Sbjct 601 SGRLLRRVSDRGVVAVLDSRMATAGYGGYLRASLPPFWQTTNGAQVRAALQRL 653 >gi|336460964|gb|EGO39845.1| DNA helicase, Rad3 [Mycobacterium avium subsp. paratuberculosis S397] Length=663 Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/653 (83%), Positives = 584/653 (90%), Gaps = 5/653 (0%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 +PELLA AVAALGG+ R GQQ+MAAAVA AF+TG HLVVQAGTGTGKSLAYLVPAI+ AL Sbjct 1 MPELLATAVAALGGSEREGQQQMAAAVAQAFDTGRHLVVQAGTGTGKSLAYLVPAIVHAL 60 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 DD+PVVVSTATIALQRQLVDRDLP+L+DSL ALPRRP+FALLKGRRNYLCLNKIHN Sbjct 61 RDDSPVVVSTATIALQRQLVDRDLPRLIDSLAAALPRRPQFALLKGRRNYLCLNKIHNGG 120 Query 129 TASDHDD-ERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 A + +RPQEELF+P+AV+ALGRDVQRLT WAS+T SGDRDDLKPGV DRSWSQVSV Sbjct 121 PADGEEAADRPQEELFNPMAVSALGRDVQRLTEWASSTDSGDRDDLKPGVPDRSWSQVSV 180 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 SARECLGVARCPFG+ECFSERAR AG ADVVVTNHALLAIDAV++SA+LPEH LLV+DE Sbjct 181 SARECLGVARCPFGAECFSERARSRAGQADVVVTNHALLAIDAVSDSAILPEHALLVIDE 240 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVT+VA AELTSA LG+AARRI RLV P++ QRL+A +ATF++AIHD PGRID Sbjct 241 AHELVDRVTAVATAELTSAALGVAARRIGRLVSPELVQRLEATTATFAAAIHDGTPGRID 300 Query 308 CLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPA 367 LDDE+ATYL+ALRDAASAARSAIDT SD AS RAEA A L+EISDTASR+LASF PA Sbjct 301 RLDDELATYLAALRDAASAARSAIDTTSDPKAASARAEAVAALSEISDTASRVLASFGPA 360 Query 368 IPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAM 427 IPDR+DVVWL+HEDN + R VLRVAPLSVA+LL +VF+R+T VLTSATLTIGGSFDAM Sbjct 361 IPDRTDVVWLDHEDNRGAMRPVLRVAPLSVADLLRDRVFSRSTVVLTSATLTIGGSFDAM 420 Query 428 ATAWGLTA----DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELI 483 A AWGL D PWRGLDVGSPFQHAK+GILYVAAHLPPPGRDG GSAEQLTEIAELI Sbjct 421 AAAWGLKGPDGDDPPWRGLDVGSPFQHAKAGILYVAAHLPPPGRDGVGSAEQLTEIAELI 480 Query 484 TAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLS 543 TAA GRTLGLFSSMRAARAA EAMR+RLSTPVLCQGDDSTS LVE+F+A+ TSLFGTLS Sbjct 481 TAADGRTLGLFSSMRAARAAAEAMRDRLSTPVLCQGDDSTSALVEQFSAEPQTSLFGTLS 540 Query 544 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQG 603 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLL ARQRAVAARGGNGFM VAASHAALLLAQG Sbjct 541 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLLGARQRAVAARGGNGFMAVAASHAALLLAQG 600 Query 604 SGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 SGRLLRRV+DRGVVAVLDSRMATA YG +LRASLPPFWQTTN QVRAAL+RL Sbjct 601 SGRLLRRVSDRGVVAVLDSRMATAGYGGYLRASLPPFWQTTNGAQVRAALQRL 653 >gi|41408529|ref|NP_961365.1| DinG [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396885|gb|AAS04748.1| DinG [Mycobacterium avium subsp. paratuberculosis K-10] Length=663 Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/653 (83%), Positives = 583/653 (90%), Gaps = 5/653 (0%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 +PELLA AVAALGG+ R GQQ+MAAAVA AF+TG HLVVQAGTGTGKSLAYLVPAI+ AL Sbjct 1 MPELLATAVAALGGSEREGQQQMAAAVAQAFDTGRHLVVQAGTGTGKSLAYLVPAIVHAL 60 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 DD+PVVVSTATIALQRQLVDRDLP+L+DSL ALPRRP+FALLKGRRNYLCLNKIHN Sbjct 61 RDDSPVVVSTATIALQRQLVDRDLPRLIDSLAAALPRRPQFALLKGRRNYLCLNKIHNGG 120 Query 129 TASDHDD-ERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 A + +RPQEELF+P+AV+ALGRDVQRLT WAS+T SGDRDDLKP V DRSWSQVSV Sbjct 121 PADGEEAADRPQEELFNPMAVSALGRDVQRLTEWASSTDSGDRDDLKPSVPDRSWSQVSV 180 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 SARECLGVARCPFG+ECFSERAR AG ADVVVTNHALLAIDAV++SA+LPEH LLV+DE Sbjct 181 SARECLGVARCPFGAECFSERARSRAGQADVVVTNHALLAIDAVSDSAILPEHALLVIDE 240 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVT+VA AELTSA LG+AARRI RLV P++ QRL+A +ATF++AIHD PGRID Sbjct 241 AHELVDRVTAVATAELTSAALGVAARRIGRLVSPELVQRLEATTATFAAAIHDGTPGRID 300 Query 308 CLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFAPA 367 LDDE+ATYL+ALRDAASAARSAIDT SD AS RAEA A L+EISDTASR+LASF PA Sbjct 301 RLDDELATYLAALRDAASAARSAIDTTSDPKAASARAEAVAALSEISDTASRVLASFGPA 360 Query 368 IPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAM 427 IPDR+DVVWL+HEDN + R VLRVAPLSVA+LL +VF+R+T VLTSATLTIGGSFDAM Sbjct 361 IPDRTDVVWLDHEDNRGAMRPVLRVAPLSVADLLRDRVFSRSTVVLTSATLTIGGSFDAM 420 Query 428 ATAWGLTA----DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELI 483 A AWGL D PWRGLDVGSPFQHAK+GILYVAAHLPPPGRDG GSAEQLTEIAELI Sbjct 421 AAAWGLKGPDGDDPPWRGLDVGSPFQHAKAGILYVAAHLPPPGRDGVGSAEQLTEIAELI 480 Query 484 TAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLS 543 TAA GRTLGLFSSMRAARAA EAMR+RLSTPVLCQGDDSTS LVE+F+A+ TSLFGTLS Sbjct 481 TAADGRTLGLFSSMRAARAAAEAMRDRLSTPVLCQGDDSTSALVEQFSAEPQTSLFGTLS 540 Query 544 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQG 603 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLL ARQRAVAARGGNGFM VAASHAALLLAQG Sbjct 541 LWQGVDVPGPSLSLVLIDRIPFPRPDDPLLGARQRAVAARGGNGFMAVAASHAALLLAQG 600 Query 604 SGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 SGRLLRRV+DRGVVAVLDSRMATA YG +LRASLPPFWQTTN QVRAAL+RL Sbjct 601 SGRLLRRVSDRGVVAVLDSRMATAGYGGYLRASLPPFWQTTNGAQVRAALQRL 653 >gi|145222935|ref|YP_001133613.1| helicase c2 [Mycobacterium gilvum PYR-GCK] gi|145215421|gb|ABP44825.1| helicase c2 [Mycobacterium gilvum PYR-GCK] Length=670 Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust. Identities = 490/661 (75%), Positives = 552/661 (84%), Gaps = 12/661 (1%) Query 7 MSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIR 66 M V ELLA AVAALGG R GQ EMA AVA AF TGEHL VQAGTGTGKSLAYLVPAI Sbjct 1 MEVTELLATAVAALGGATRDGQIEMAEAVARAFATGEHLAVQAGTGTGKSLAYLVPAIAH 60 Query 67 ALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHN 126 +L D+ PVVVSTATIALQRQLVDRDLP+L DSL+ ALPRRP FALLKGR NYLCLNKIHN Sbjct 61 SLDDNRPVVVSTATIALQRQLVDRDLPRLADSLSGALPRRPVFALLKGRGNYLCLNKIHN 120 Query 127 SVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVS 186 TAS+ +D PQEELF P+A +ALGRDV RLT W+ TT +GDRDDLKPGV DRSW+QVS Sbjct 121 GSTASEPEDV-PQEELFSPMAASALGRDVARLTEWSDTTDTGDRDDLKPGVPDRSWAQVS 179 Query 187 VSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVD 246 VS+REC+GV+RCPFG++CFSERARG A ADVVVTNHALLAIDA+ + VLPEH +LVVD Sbjct 180 VSSRECIGVSRCPFGTDCFSERARGRAAEADVVVTNHALLAIDAIGDLNVLPEHEMLVVD 239 Query 247 EAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRI 306 EAHEL DRVTSVA AEL+ +LG+A RR R+V ++ QRL+AA ATF+SA+ DAR GRI Sbjct 240 EAHELVDRVTSVATAELSPTSLGVAHRRAARVVSAELAQRLEAAIATFTSALFDARHGRI 299 Query 307 DCLDDEMATYLSALRDAASAARSAIDTG-SDTTTASVRAEAGAVLTEISDTASRILASFA 365 D LDDE+A+YL+ LRD+A AAR+A+DT +D TA+ R+EA + L++++DT+SRIL SF Sbjct 300 DVLDDELASYLTVLRDSAHAARTAVDTARNDPKTATARSEAASALSDVADTSSRILDSFV 359 Query 366 PAIPDRSDVVWLEH-EDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSF 424 PAIPDR+DVVWLEH ED + R +LRVAPLSVA LL +++F +T VLTSATLTIGGSF Sbjct 360 PAIPDRTDVVWLEHIEDGRSAGRTILRVAPLSVAGLLRSRLFGHSTAVLTSATLTIGGSF 419 Query 425 DAMATAWGLTA---------DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQ 475 DAMA+AWGL D WRGLDVGSPF HAK+GILYVAAHLPPPGRDG+GSAEQ Sbjct 420 DAMASAWGLAGPRDDTAAAPDPGWRGLDVGSPFDHAKAGILYVAAHLPPPGRDGTGSAEQ 479 Query 476 LTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAA 535 L EIA LI AA GRTLGLFSSMRAA+A E MRERL TPVLCQGDD+TS LV++F D Sbjct 480 LDEIAALIEAADGRTLGLFSSMRAAKATAEVMRERLGTPVLCQGDDTTSALVQRFADDEQ 539 Query 536 TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASH 595 TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLL+ARQRA+AARGGNGFM VAASH Sbjct 540 TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLTARQRAIAARGGNGFMAVAASH 599 Query 596 AALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRR 655 AALLLAQG+GRLLRRV DRGVVAVLDSRMATARY FLRASLPP+W TT+ VRAALRR Sbjct 600 AALLLAQGAGRLLRRVEDRGVVAVLDSRMATARYSGFLRASLPPYWATTDGAAVRAALRR 659 Query 656 L 656 L Sbjct 660 L 660 >gi|120405252|ref|YP_955081.1| DEAD/DEAH box helicase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958070|gb|ABM15075.1| DEAD/DEAH box helicase domain protein [Mycobacterium vanbaalenii PYR-1] Length=666 Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/663 (75%), Positives = 551/663 (84%), Gaps = 14/663 (2%) Query 7 MSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIR 66 M V +LLA AV ALGG R GQ MA AVA AF +G HL VQAGTGTGKSLAYLVPAI Sbjct 1 MEVADLLATAVEALGGASRDGQIAMAEAVAQAFTSGRHLAVQAGTGTGKSLAYLVPAIAH 60 Query 67 ALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHN 126 AL + PVVVSTATIALQRQLVDRDLP+L DSL + LPRRP FALLKGR NYLCLNKIHN Sbjct 61 ALDESRPVVVSTATIALQRQLVDRDLPRLADSLADVLPRRPTFALLKGRGNYLCLNKIHN 120 Query 127 SVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVS 186 S+ DD PQEELF PVA +ALGRDVQRLT W+ TT +GDRD+LKPGV DRSWSQVS Sbjct 121 GSAGSEPDDV-PQEELFSPVASSALGRDVQRLTEWSETTATGDRDELKPGVADRSWSQVS 179 Query 187 VSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVD 246 VSAREC+GV+RCPFG++CFSERARG AG AD+VVTNHALLAIDA+ ++ VLPEH LLVVD Sbjct 180 VSARECIGVSRCPFGTDCFSERARGRAGDADIVVTNHALLAIDAIGDANVLPEHDLLVVD 239 Query 247 EAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRI 306 EAHEL DRVT VA AEL++ +LG+A RR R+V P++ +RL+AA+ATFS+AI +ARPGRI Sbjct 240 EAHELVDRVTGVATAELSATSLGVAHRRAARIVAPELAERLEAATATFSAAIFEARPGRI 299 Query 307 DCLDDEMATYLSALRDAASAARSAIDTG-SDTTTASVRAEAGAVLTEISDTASRILASFA 365 D LD+E+A+YL+ALRDAA AAR+A+DT +D T S RAEA L+E+ DTASRIL SF Sbjct 300 DVLDEELASYLAALRDAAHAARTAVDTAPNDPKTTSARAEAATALSEVGDTASRILDSFV 359 Query 366 PAIPDRSDVVWLEH-EDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSF 424 PAIPDR+DVVWL+H ED +RA+LRVAPLSVA LL +++F T VLTSATLTIGG+F Sbjct 360 PAIPDRTDVVWLDHIEDARSGSRALLRVAPLSVAGLLRSRLFGHTTAVLTSATLTIGGNF 419 Query 425 DAMATAWGLTA-----------DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSA 473 D+MA+AWGLT WRGLDVGSPF HAKSGILYVAAHLPPPGRDG+GSA Sbjct 420 DSMASAWGLTGAADREQDRTGEGAGWRGLDVGSPFDHAKSGILYVAAHLPPPGRDGTGSA 479 Query 474 EQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTAD 533 EQL EIA LI AA GRTLGLFSSMRAA+AA E MRERL+TPVLCQG+D+TS LV++F D Sbjct 480 EQLDEIAGLIEAADGRTLGLFSSMRAAKAAAEVMRERLATPVLCQGEDTTSALVQRFADD 539 Query 534 AATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAA 593 TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLL+ARQRAVAARGGNGFM VAA Sbjct 540 EQTSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLTARQRAVAARGGNGFMAVAA 599 Query 594 SHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAAL 653 SHAALLLAQG+GRLLRRV DRGVVAVLDSRMATARY FLRASLPPFW TT+ VRAAL Sbjct 600 SHAALLLAQGAGRLLRRVDDRGVVAVLDSRMATARYSGFLRASLPPFWATTDGAAVRAAL 659 Query 654 RRL 656 +RL Sbjct 660 QRL 662 >gi|315443398|ref|YP_004076277.1| DNA helicase, Rad3 [Mycobacterium sp. Spyr1] gi|315261701|gb|ADT98442.1| DNA helicase, Rad3 [Mycobacterium sp. Spyr1] Length=670 Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 489/661 (74%), Positives = 552/661 (84%), Gaps = 12/661 (1%) Query 7 MSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIR 66 M V ELLA AVAALGG R GQ EMA AVA AF TGEHL VQAGTGTGKSLAYLVPAI Sbjct 1 MEVTELLATAVAALGGATRDGQIEMAEAVARAFATGEHLAVQAGTGTGKSLAYLVPAIAH 60 Query 67 ALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHN 126 +L D+ PVVVSTATIALQRQLVDRDLP+L DSL+ ALPRRP FALLKGR NYLCLNKIHN Sbjct 61 SLDDNRPVVVSTATIALQRQLVDRDLPRLADSLSGALPRRPVFALLKGRGNYLCLNKIHN 120 Query 127 SVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVS 186 TAS+ +D PQEELF P+A +ALGRDV RLT W+ TT +GDRDDLKPGV DRSW+QVS Sbjct 121 GSTASEPEDV-PQEELFSPMAASALGRDVARLTEWSDTTDTGDRDDLKPGVPDRSWAQVS 179 Query 187 VSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVD 246 VS+REC+GV+RCPFG++CFSERARG A ADVVVTNHALLAIDA+ + VLPEH +LVVD Sbjct 180 VSSRECIGVSRCPFGTDCFSERARGRAAEADVVVTNHALLAIDAIGDLNVLPEHEMLVVD 239 Query 247 EAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRI 306 EAHEL DRVTSVA AEL+ +LG+A RR R+V ++ QRL+AA ATF+SA+ DAR GRI Sbjct 240 EAHELVDRVTSVATAELSPTSLGVAHRRAARVVSAELAQRLEAAIATFTSALFDARHGRI 299 Query 307 DCLDDEMATYLSALRDAASAARSAIDTG-SDTTTASVRAEAGAVLTEISDTASRILASFA 365 D LDDE+A+YL+ LRD+A AAR+A+DT +D TA+ R+EA + L++++DT+SRIL SF Sbjct 300 DVLDDELASYLTVLRDSAHAARTAVDTARNDPKTATARSEAASALSDVADTSSRILDSFV 359 Query 366 PAIPDRSDVVWLEH-EDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSF 424 PAIPDR+DVVWLEH ED + R +LRVAPLSVA LL +++F +T VLTSATLTIGGSF Sbjct 360 PAIPDRTDVVWLEHIEDGRSAGRTILRVAPLSVAGLLRSRLFGHSTAVLTSATLTIGGSF 419 Query 425 DAMATAWGLTA---------DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQ 475 DAMA+AWGL D WRGLDVGSPF HAK+GILYVAAHLPPPGRDG+GSAEQ Sbjct 420 DAMASAWGLAGPRDDTAAAPDPGWRGLDVGSPFDHAKAGILYVAAHLPPPGRDGTGSAEQ 479 Query 476 LTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAA 535 L EIA LI AA GRTLGLFSSMRAA+A E MRER+ TPVLCQGDD+TS LV++F D Sbjct 480 LDEIAALIEAADGRTLGLFSSMRAAKATAEVMRERIDTPVLCQGDDTTSALVQRFADDEQ 539 Query 536 TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASH 595 TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLL+ARQRA+AARGGNGFM VAASH Sbjct 540 TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLTARQRAIAARGGNGFMAVAASH 599 Query 596 AALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRR 655 AALLLAQG+GRLLRRV DRGVVAVLDSRMATARY FLRASLPP+W TT+ VRAALRR Sbjct 600 AALLLAQGAGRLLRRVEDRGVVAVLDSRMATARYSGFLRASLPPYWATTDGAAVRAALRR 659 Query 656 L 656 L Sbjct 660 L 660 >gi|333989972|ref|YP_004522586.1| ATP-dependent helicase DinG [Mycobacterium sp. JDM601] gi|333485940|gb|AEF35332.1| ATP-dependent helicase DinG [Mycobacterium sp. JDM601] Length=700 Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/692 (73%), Positives = 553/692 (80%), Gaps = 45/692 (6%) Query 8 SVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRA 67 SVPELLA AVAALGG++R GQ MA AVAHAF+TGEHL VQAGTGTGKSLAYLVPAI RA Sbjct 8 SVPELLATAVAALGGSQRDGQVRMAEAVAHAFDTGEHLAVQAGTGTGKSLAYLVPAIARA 67 Query 68 LCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNS 127 + DD PVVVSTATIALQRQLVDRDLP+L D+L + LPRRP FALLKGRRNYLCLNKIH+ Sbjct 68 VADDHPVVVSTATIALQRQLVDRDLPRLADALEDVLPRRPTFALLKGRRNYLCLNKIHSG 127 Query 128 VTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 D E PQEELF+P A +ALGRDVQRLTAWA T +GDRDDLKPGV +RSW+QVSV Sbjct 128 T--GDDSGEAPQEELFEPFAASALGRDVQRLTAWADDTATGDRDDLKPGVPERSWAQVSV 185 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 SARECLG RC FG++CF+E+AR AG AD+VVTNHALLAIDA++++ VLPEH LLVVDE Sbjct 186 SARECLGATRCQFGTDCFAEQARAVAGEADIVVTNHALLAIDAISDTTVLPEHELLVVDE 245 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVTSVA AELT+A L +A RR+TRLV P + QRL AAS TF SAIHD PGR+D Sbjct 246 AHELVDRVTSVATAELTAAALSVAVRRVTRLVSPGLVQRLDAASLTFGSAIHDGTPGRMD 305 Query 308 CLDDEMATYLSALRDAASAARSAIDTG-SDTTTASVRAEAGAVLTEISDTASRILASFAP 366 LDDE+ATYL+ALRDAA A RSAIDT SD A+ R EA A L EI+DTA+R+L SF P Sbjct 306 YLDDELATYLAALRDAAGAVRSAIDTAPSDPRAATARKEAVAALAEIADTAARVLTSFEP 365 Query 367 AIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDA 426 AIP R+DVVWL HEDN S R VLRVAPLSVA LL ++FAR TTVLTSATLT+GGSFDA Sbjct 366 AIPARTDVVWLSHEDNRGSVRPVLRVAPLSVAGLLHDRLFARTTTVLTSATLTVGGSFDA 425 Query 427 MATAWGLTA------------------------------------------DTPWRGLDV 444 MA AWGLT D WRGLDV Sbjct 426 MAGAWGLTGGSVPGGSARLDGGEPKLGPPHGRRGSARLDEGEPKLGPPHRPDNGWRGLDV 485 Query 445 GSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAAT 504 GSPFQHAK+GILYVAAHLPPPGRDG+G+ QL EIAELI AAGGRTLGLFSSMRAARAA Sbjct 486 GSPFQHAKAGILYVAAHLPPPGRDGTGTDAQLDEIAELIAAAGGRTLGLFSSMRAARAAA 545 Query 505 EAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIP 564 EAMRERL TP+LCQG+D+T LVE+F ADA TSLFGTLSLWQGVDVPGPSLSLVLIDRIP Sbjct 546 EAMRERLDTPLLCQGEDTTGALVEQFAADADTSLFGTLSLWQGVDVPGPSLSLVLIDRIP 605 Query 565 FPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRM 624 FPRPDDPLL+ARQRAV+ARGGNGFM VAASHAALLLAQG+GRLLR V DRGVVAVLDSRM Sbjct 606 FPRPDDPLLTARQRAVSARGGNGFMAVAASHAALLLAQGAGRLLRGVDDRGVVAVLDSRM 665 Query 625 ATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 ATARY +LRASLPPFW TT+ +VR ALRRL Sbjct 666 ATARYAGYLRASLPPFWATTDTDKVRLALRRL 697 >gi|126436417|ref|YP_001072108.1| helicase c2 [Mycobacterium sp. JLS] gi|126236217|gb|ABN99617.1| helicase c2 [Mycobacterium sp. JLS] Length=665 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/635 (75%), Positives = 534/635 (85%), Gaps = 4/635 (0%) Query 25 RRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDDAPVVVSTATIALQ 84 R GQ EMA AVA AF+TG HL VQAGTGTGKSLAYLVPAI A+ D PVVVSTATIALQ Sbjct 28 RPGQVEMARAVATAFDTGRHLAVQAGTGTGKSLAYLVPAIAHAIAVDEPVVVSTATIALQ 87 Query 85 RQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTA-SDHDDERPQEELF 143 RQLVDRDLP+L D+L+ +LPRRP+FALLKGR NYLCLNKIHN T D D+RPQEELF Sbjct 88 RQLVDRDLPRLADALSGSLPRRPQFALLKGRGNYLCLNKIHNGSTGIGDAPDDRPQEELF 147 Query 144 DPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSARECLGVARCPFGSE 203 D VA TALGRDVQRLT WAS T +GDRD+L+PGV +RSW QVSVSAREC+GV+RCP+G++ Sbjct 148 DAVAATALGRDVQRLTKWASDTETGDRDELRPGVPERSWRQVSVSARECIGVSRCPYGTD 207 Query 204 CFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAHELADRVTSVAAAEL 263 CF+E+AR A DVVVTNHALLAIDA++++AVLPEH +V+DEAHELADRVTSVA EL Sbjct 208 CFAEKAREKAADVDVVVTNHALLAIDAISDAAVLPEHSAVVIDEAHELADRVTSVATGEL 267 Query 264 TSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCLDDEMATYLSALRDA 323 ++ +LG+A RR+ RLV+ ++ RL+AA AT SSAIHD PGRID LDDE+ATYL+ALRDA Sbjct 268 SATSLGIAHRRVARLVEGELADRLEAAVATVSSAIHDGTPGRIDRLDDELATYLTALRDA 327 Query 324 ASAARSAIDTG-SDTTTASVRAEAGAVLTEISDTASRILASFAPAIPDRSDVVWLEHEDN 382 A ARSAIDT SD A+ R EA L+++SDTA+RIL SF PAIPDR DVVWL+HE Sbjct 328 ADRARSAIDTAPSDPKAAAARTEAVTALSDVSDTANRILDSFVPAIPDRVDVVWLDHEGG 387 Query 383 HE-SARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMATAWGLTADTPWRG 441 S A+LRVAPLSVA LL T++F ATTVLTSATLT+GG+F+AMA AWGL ADT W G Sbjct 388 GAGSVSAILRVAPLSVAGLLRTRLFEHATTVLTSATLTVGGNFEAMARAWGL-ADTKWHG 446 Query 442 LDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAAR 501 LDVGSPF HAK+GILYVAAHLPPPGRDG+GSAEQL EI LITAAGGRTLGLFSSMRAA+ Sbjct 447 LDVGSPFDHAKAGILYVAAHLPPPGRDGTGSAEQLKEIEALITAAGGRTLGLFSSMRAAK 506 Query 502 AATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLID 561 AA E MR+RL TPVLCQG+D+TS LVE+F D TSLFGTLSLWQGVDVPGPSLSLVLID Sbjct 507 AAAEVMRDRLDTPVLCQGEDTTSALVERFADDPQTSLFGTLSLWQGVDVPGPSLSLVLID 566 Query 562 RIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLD 621 RIPFPRPDDPLL+ARQRAV A GGNGFM VAASHAALLLAQG+GRLLRR DRGVVAVLD Sbjct 567 RIPFPRPDDPLLTARQRAVTAHGGNGFMAVAASHAALLLAQGAGRLLRRTDDRGVVAVLD 626 Query 622 SRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 SRMATARY +LRASLPPFW TT+ +VRAAL RL Sbjct 627 SRMATARYSGYLRASLPPFWATTDPARVRAALERL 661 >gi|108800819|ref|YP_641016.1| helicase c2 [Mycobacterium sp. MCS] gi|119869959|ref|YP_939911.1| helicase c2 [Mycobacterium sp. KMS] gi|108771238|gb|ABG09960.1| Helicase c2 [Mycobacterium sp. MCS] gi|119696048|gb|ABL93121.1| helicase c2 [Mycobacterium sp. KMS] Length=665 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/635 (75%), Positives = 534/635 (85%), Gaps = 4/635 (0%) Query 25 RRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDDAPVVVSTATIALQ 84 R GQ EMA AVA AF+TG HL VQAGTGTGKSLAYLVPAI A+ D PVVVSTATIALQ Sbjct 28 RPGQVEMARAVATAFDTGRHLAVQAGTGTGKSLAYLVPAIAHAIAVDEPVVVSTATIALQ 87 Query 85 RQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTA-SDHDDERPQEELF 143 RQLVDRDLP+L D+L+ +LPRRP+FALLKGR NYLCLNKIHN T D D+RPQEELF Sbjct 88 RQLVDRDLPRLADALSGSLPRRPQFALLKGRGNYLCLNKIHNGSTGIGDAPDDRPQEELF 147 Query 144 DPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSARECLGVARCPFGSE 203 D VA TALGRDVQRLT WAS T +GDRD+L+PGV +RSW QVSVSAREC+GV+RCP+G++ Sbjct 148 DAVAATALGRDVQRLTKWASDTETGDRDELRPGVPERSWRQVSVSARECIGVSRCPYGTD 207 Query 204 CFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAHELADRVTSVAAAEL 263 CF+E+AR A DVVVTNHALLAIDA++++AVLPEH +V+DEAHELADRVTSVA EL Sbjct 208 CFAEKAREKAADVDVVVTNHALLAIDAISDAAVLPEHSAVVIDEAHELADRVTSVATGEL 267 Query 264 TSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCLDDEMATYLSALRDA 323 ++ +LG+A RR+ RLV+ ++ RL+AA AT SSAIHD PGRID LDDE+ATYL+ALRDA Sbjct 268 SATSLGIAHRRVARLVEGELADRLEAAVATVSSAIHDGTPGRIDRLDDELATYLTALRDA 327 Query 324 ASAARSAIDTG-SDTTTASVRAEAGAVLTEISDTASRILASFAPAIPDRSDVVWLEHEDN 382 A ARSAIDT SD A+ R EA L+++SDTA+RIL SF PAIPDR DVVWL+HE Sbjct 328 ADRARSAIDTAPSDPKAAAARTEAVTALSDVSDTANRILDSFVPAIPDRVDVVWLDHEGG 387 Query 383 HE-SARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMATAWGLTADTPWRG 441 S A+LRVAPLSVA LL T++F ATTVLTSATLT+GG+F+AMA AWGL ADT W G Sbjct 388 GAGSVSAILRVAPLSVAGLLRTRLFEHATTVLTSATLTVGGNFEAMARAWGL-ADTKWHG 446 Query 442 LDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAAR 501 LDVGSPF HAK+GILYVAAHLPPPGRDG+GSAEQL EI LITAAGGRTLGLFSSMRAA+ Sbjct 447 LDVGSPFDHAKAGILYVAAHLPPPGRDGTGSAEQLKEIEALITAAGGRTLGLFSSMRAAK 506 Query 502 AATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLID 561 AA E MR+RL TPVLCQG+D+TS LVE+F D TSLFGTLSLWQGVDVPGPSLSLVLID Sbjct 507 AAAEVMRDRLDTPVLCQGEDTTSALVERFADDPQTSLFGTLSLWQGVDVPGPSLSLVLID 566 Query 562 RIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLD 621 RIPFPRPDDPLL+ARQRAV A GGNGFM VAASHAALLLAQG+GRLLRR DRGVVAVLD Sbjct 567 RIPFPRPDDPLLTARQRAVTAHGGNGFMAVAASHAALLLAQGAGRLLRRTDDRGVVAVLD 626 Query 622 SRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 SRMATARY +LRASLPPFW TT+ +VRAAL RL Sbjct 627 SRMATARYSGYLRASLPPFWATTDPARVRAALERL 661 >gi|118469948|ref|YP_889167.1| helicase [Mycobacterium smegmatis str. MC2 155] gi|118171235|gb|ABK72131.1| putative helicase [Mycobacterium smegmatis str. MC2 155] Length=683 Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/671 (68%), Positives = 534/671 (80%), Gaps = 26/671 (3%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 V +LL +AV LGG R GQ MA AVA AFETGEHL VQAGTGTGKSLAYLVP+I RA+ Sbjct 12 VTKLLNVAVEGLGGATRPGQVRMAQAVADAFETGEHLAVQAGTGTGKSLAYLVPSIARAM 71 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 + VVVSTATIALQRQLVDRDLP+L DSLT+ LPRRP+FALLKGR NYLCLNK+HN Sbjct 72 ETEQNVVVSTATIALQRQLVDRDLPRLADSLTDVLPRRPRFALLKGRGNYLCLNKVHNG- 130 Query 129 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 188 A+ D+RPQ+ELF+PVA+TALGRDVQRL W+S T +GDRD+L PGV DRSWSQVSVS Sbjct 131 -AATEPDDRPQDELFNPVAMTALGRDVQRLIEWSSDTETGDRDELTPGVPDRSWSQVSVS 189 Query 189 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 248 AREC+GV+RCPFG++CF+ERAR AG AD+VVTNHALLAIDA+++ +VLPE+ LLVVDEA Sbjct 190 ARECIGVSRCPFGTDCFAERARDKAGNADIVVTNHALLAIDALSDYSVLPEYELLVVDEA 249 Query 249 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 308 HELADRVT VA EL+ ++G+A RR RLVD ++ +RL+A+ AT SS ++D GR+D Sbjct 250 HELADRVTGVATGELSPTSMGVAHRRAARLVDAELAERLEASIATLSSMLYDVPAGRLDV 309 Query 309 LDDEMATYLSALRDAASAARSAIDTG-SDTTTASVRAEAGAVLTEISDTASRILASFAPA 367 LD+E+ATYL+A+RD+A+ R AIDT SD A+ R EA L E++DTA+RIL SF P Sbjct 310 LDEELATYLTAVRDSANTVRMAIDTTPSDPQAAAARTEAVTALNEVADTATRILTSFVPP 369 Query 368 IPDRSDVVWLEHEDNHESA-----RAVLRVAPLSVAELLATQVFARATTVLTSATLTIGG 422 IPDR DVVWLEH++ A R+VLRVAP+SV+ LL T++FA T VLTSATL +GG Sbjct 370 IPDRVDVVWLEHDEGPARAGGGAVRSVLRVAPMSVSGLLRTRLFAHTTAVLTSATLCLGG 429 Query 423 SFDAMATAWGLTA--------DTP---------WRGLDVGSPFQHAKSGILYVAAHLPPP 465 +FDAMA WGL A + P W G+DVGSPF+HAKS ILYVA HLP P Sbjct 430 NFDAMARNWGLAARADDEDSGEKPDKTKSAKPGWHGIDVGSPFEHAKSAILYVAKHLPAP 489 Query 466 GRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTST 525 GR+G+ A L EI L+TAAGGRTLGLFSSMRAA+AA E MRERL TPVLCQG+D+TS Sbjct 490 GREGTSPA-ALDEIEALVTAAGGRTLGLFSSMRAAKAAAEVMRERLDTPVLCQGEDTTSA 548 Query 526 LVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGG 585 LV++F+AD TSLFGTLSLWQGVDVPGPSL LV+IDRIPFPRPDDPLL+ARQRA+ A GG Sbjct 549 LVQQFSADPQTSLFGTLSLWQGVDVPGPSLQLVIIDRIPFPRPDDPLLTARQRAITAHGG 608 Query 586 NGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTN 645 NGFM VAA+HAALLLAQG+GRLLR DRGVVAVLDSR+ATARYG +LRASLPPFW TT+ Sbjct 609 NGFMAVAANHAALLLAQGAGRLLRHTDDRGVVAVLDSRLATARYGGYLRASLPPFWATTD 668 Query 646 ATQVRAALRRL 656 +VR ALRRL Sbjct 669 PERVRQALRRL 679 >gi|254819162|ref|ZP_05224163.1| DeaD/DeaH family protein helicase [Mycobacterium intracellulare ATCC 13950] Length=561 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/556 (81%), Positives = 486/556 (88%), Gaps = 8/556 (1%) Query 7 MSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIR 66 +SV ELLA AVAALGG+ R GQQEMA AVA AF T EHLVVQAGTGTGKSLAYLVPAI+ Sbjct 6 VSVHELLATAVAALGGSERSGQQEMADAVARAFATDEHLVVQAGTGTGKSLAYLVPAIVH 65 Query 67 ALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHN 126 AL DD+PVVVSTATIALQRQLVDRDLP+L+D+L +ALPRRP+FALLKGRRNYLCLNKIHN Sbjct 66 ALDDDSPVVVSTATIALQRQLVDRDLPRLIDALADALPRRPQFALLKGRRNYLCLNKIHN 125 Query 127 SVTASDHD-DERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQV 185 A D D RPQEELF+P+AV+ALGRDVQRLT WASTT SGDRDDLKPGV DRSWSQV Sbjct 126 GGAADGDDVDGRPQEELFNPMAVSALGRDVQRLTEWASTTESGDRDDLKPGVPDRSWSQV 185 Query 186 SVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVV 245 SVSARECLGVARCPFG+ECFSERARG AG ADVVVTNHALLAIDAVAESAVLPEH LLVV Sbjct 186 SVSARECLGVARCPFGTECFSERARGLAGRADVVVTNHALLAIDAVAESAVLPEHALLVV 245 Query 246 DEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGR 305 DEAHEL DRVTSVA AELTSA LG+A+RRI+RLV P++ QRL A +A F++AIHD PGR Sbjct 246 DEAHELVDRVTSVATAELTSAALGVASRRISRLVSPELVQRLDATTANFAAAIHDGTPGR 305 Query 306 IDCLDDEMATYLSALRDAASAARSAIDTGSDTTTASVRAEAGAVLTEISDTASRILASFA 365 ID LD+++ATYL+ALRD A+AARSAIDT +D A+ RAEA A L+EIS+TASR+LASF Sbjct 306 IDRLDEDLATYLTALRDVATAARSAIDTTNDAKAAAARAEAVAALSEISETASRVLASFG 365 Query 366 PAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFD 425 PAIPDR+DVVWLEHE+N + R VLRVAPLSVA LL +VF+R+T VLTSATLTIGGSFD Sbjct 366 PAIPDRTDVVWLEHEENRGAPRPVLRVAPLSVAGLLRQRVFSRSTVVLTSATLTIGGSFD 425 Query 426 AMATAWGLTA-------DTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTE 478 AMA AWGLTA D WRGLDVGSPFQHAK+GILYVAAHLPPPGRDG GSAEQL E Sbjct 426 AMAAAWGLTAPTSDDGGDARWRGLDVGSPFQHAKAGILYVAAHLPPPGRDGVGSAEQLAE 485 Query 479 IAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSL 538 IAELITAA GRTLGLFSSMRAARAA EAMRERLSTPVLCQGDDSTS LVE+F+AD TSL Sbjct 486 IAELITAADGRTLGLFSSMRAARAAAEAMRERLSTPVLCQGDDSTSALVEQFSADPQTSL 545 Query 539 FGTLSLWQGVDVPGPS 554 FGTLSLWQGVDVPGPS Sbjct 546 FGTLSLWQGVDVPGPS 561 >gi|169628562|ref|YP_001702211.1| ATP-dependent helicase DinG [Mycobacterium abscessus ATCC 19977] gi|169240529|emb|CAM61557.1| Probable ATP-dependent helicase DinG [Mycobacterium abscessus] Length=652 Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/640 (68%), Positives = 499/640 (78%), Gaps = 19/640 (2%) Query 31 MAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDDAPVVVSTATIALQRQLVDR 90 MA AV H+ +GEHLVVQAGTGTGKSLAYLVPA+ A+ +PVVVSTATIALQRQLVDR Sbjct 1 MATAVEHSLHSGEHLVVQAGTGTGKSLAYLVPALAHAIEQSSPVVVSTATIALQRQLVDR 60 Query 91 DLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTASDHDDERPQEELFDPVAVTA 150 DLP+L ++LT +L R+P+FA+LKGR NYLCLNK+HN + D E P + LF+P A +A Sbjct 61 DLPRLAEALTPSLARKPRFAILKGRGNYLCLNKLHNGAAS---DQEAP-DTLFEPFAASA 116 Query 151 LGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSARECLGVARCPFGSECFSERAR 210 LGRDVQRL WA +T +GDRD+LKPGV DRSWSQVSVSARECLG RCPFG+ECF+E AR Sbjct 117 LGRDVQRLNDWAESTKTGDRDELKPGVPDRSWSQVSVSARECLGATRCPFGTECFAELAR 176 Query 211 GAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAHELADRVTSVAAAELTSATLGM 270 AG +DVVVTNHALLAIDA+A+ +LPEH ++VDEAH+L DRVTSVA EL++ L + Sbjct 177 LEAGQSDVVVTNHALLAIDAIADINILPEHDAVIVDEAHDLVDRVTSVATQELSAVGLTV 236 Query 271 AARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCLDDEMATYLSALRDAASAARSA 330 RRI RLV P+ R +A+SATFSS IHD+RPG ID D+E TYL+ALRDAA+AAR+ Sbjct 237 TIRRIGRLVSPETASRFEASSATFSSLIHDSRPGTIDRADEETVTYLTALRDAAAAARTE 296 Query 331 IDTG--SDTTTASVRAEAGAVLTEISDTASRILASFA-PAIPDRSDVVWLEHEDNHESAR 387 I TG +D TAS R EA A L +I D AS LA +A P I R +VVWL+HEDN S R Sbjct 297 IPTGQSTDPATASARTEAVAALDDIVDAASLALACWAEPDITARPNVVWLDHEDNRGSIR 356 Query 388 AVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMATAWGLTADTP--------- 438 VLR+APLSVA LL T++F + T VLTSATL +GG FDAMA +WGL A P Sbjct 357 PVLRIAPLSVAGLLRTRLFGQRTVVLTSATLALGGRFDAMAASWGLPAREPAADSPTEIK 416 Query 439 --WRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSS 496 W G+DVGSPFQH KS ILY+A HLP PGRDG G+A L EI L+ AAGGRTLGLFSS Sbjct 417 ATWHGIDVGSPFQHEKSAILYLARHLPAPGRDGVGAA-TLDEIETLVRAAGGRTLGLFSS 475 Query 497 MRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLS 556 MRAA+ A+E MR RL TPVLCQGDD+TS LVE+F+AD TSLFGTLSLWQGVDVPGPSLS Sbjct 476 MRAAKEASEVMRSRLETPVLCQGDDATSILVEQFSADPQTSLFGTLSLWQGVDVPGPSLS 535 Query 557 LVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGV 616 LVLIDRIPFPRPDDPL +ARQRA+++RGGNGFM VA + AALLLAQG+GRLLR DRGV Sbjct 536 LVLIDRIPFPRPDDPLRAARQRAISSRGGNGFMAVAGTQAALLLAQGTGRLLRSAHDRGV 595 Query 617 VAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 VAVLDSRM+TA YG FLRASLPPFW T + V AAL+RL Sbjct 596 VAVLDSRMSTAGYGGFLRASLPPFWSTHDLAVVTAALQRL 635 >gi|331695355|ref|YP_004331594.1| helicase c2 [Pseudonocardia dioxanivorans CB1190] gi|326950044|gb|AEA23741.1| helicase c2 [Pseudonocardia dioxanivorans CB1190] Length=678 Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/671 (63%), Positives = 488/671 (73%), Gaps = 30/671 (4%) Query 8 SVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRA 67 V ELL AV +LGG RR GQ MA AV A EHL VQAGTGTGKSL YLVPAI A Sbjct 13 GVAELLEAAVESLGGARREGQDAMAQAVRKAIADHEHLAVQAGTGTGKSLGYLVPAIRHA 72 Query 68 LCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNS 127 + D+ VVVSTATIALQRQLVDRDLP+L +LT L R P FA+LKGRRNYLCLNK+H Sbjct 73 VAADSTVVVSTATIALQRQLVDRDLPRLAKALTPLLGRTPTFAILKGRRNYLCLNKLHGD 132 Query 128 VTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 + D +E+LFDP AV+A+GR+V+RL WAS T +GDRD++ PGV D +W QVSV Sbjct 133 ESMLDD----VEEQLFDPFAVSAMGRNVKRLHEWASDTETGDRDEVVPGVPDSAWRQVSV 188 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 SARECLG ARCP G +CF+E+AR AG ADVVVTNHALLAIDA+ E+ VLPEH ++VVDE Sbjct 189 SARECLGAARCPVGDDCFAEKARAEAGRADVVVTNHALLAIDAMGEAQVLPEHDVVVVDE 248 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVT A AELT AT+ AARR +LVD K RL A + + D +PGR D Sbjct 249 AHELVDRVTGAATAELTPATVAAAARRCGKLVDQKTADRLAEAGEGLALVLEDLQPGRWD 308 Query 308 CLDDEMATYLSALRDAASAARSAI--DTGSDTTTASVRAEAGAVLTEISDTASRILASFA 365 L ++ LS +RDAA+A + + + D A+ R A A++ E+ D A R+L +FA Sbjct 309 ELPKGVSGILSVIRDAAAACKQGLGGERREDPEGAAGRKVALALVDEVLDVAVRVLGAFA 368 Query 366 ---PAIPDRSDVVWLEHEDNHESARA-VLRVAPLSVAELLATQVFARATTVLTSATLTIG 421 PA+ R DVVWL E E AR VLR APL V LL ++F R+TT+LTSATLT+G Sbjct 369 EDDPAV--RRDVVWL-GEQGPEGARTRVLRAAPLWVGGLLRDRLFGRSTTILTSATLTLG 425 Query 422 GSFDAMATAWGLTA---------------DTP-WRGLDVGSPFQHAKSGILYVAAHLPPP 465 GSFDA+A WGL D P W GLDVGSPF HA+SGILY A HLPPP Sbjct 426 GSFDALARQWGLPPAAAVAATAGDPVPDPDAPRWSGLDVGSPFVHARSGILYTARHLPPP 485 Query 466 GRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTST 525 GRDG A L EIA L+ AAGGRTLGLFSSMRAA+ ATEA+R RLSTP+LCQGDDST Sbjct 486 GRDGLPPA-YLDEIAGLVEAAGGRTLGLFSSMRAAKQATEALRGRLSTPLLCQGDDSTML 544 Query 526 LVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGG 585 LV++F D TSLFGTLSLWQGVDVPGPSLS V+IDRIPFPRPDDPL+ ARQRA ARGG Sbjct 545 LVKRFAEDDETSLFGTLSLWQGVDVPGPSLSCVIIDRIPFPRPDDPLVGARQRATDARGG 604 Query 586 NGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTN 645 NGF+TV+A+HAALLLAQG+GRLLR + DRGVVA+LDSR+ATARYG FLRASLPPFWQT + Sbjct 605 NGFLTVSATHAALLLAQGAGRLLRGMDDRGVVAILDSRIATARYGGFLRASLPPFWQTHD 664 Query 646 ATQVRAALRRL 656 +VRAAL RL Sbjct 665 PEKVRAALTRL 675 >gi|226360567|ref|YP_002778345.1| ATP-dependent DNA helicase [Rhodococcus opacus B4] gi|226239052|dbj|BAH49400.1| putative ATP-dependent DNA helicase [Rhodococcus opacus B4] Length=682 Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/677 (60%), Positives = 496/677 (74%), Gaps = 34/677 (5%) Query 8 SVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRA 67 +VPELL AV +LGG R Q MA+AVAH+ +TGEHL VQAGTGTGKSLAYLVP++ A Sbjct 7 NVPELLRTAVRSLGGAERSNQLTMASAVAHSIDTGEHLAVQAGTGTGKSLAYLVPSVRHA 66 Query 68 LCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNS 127 + V+VSTATIALQRQL+DRD+P+L D+L +L RRP FA+LKGR NYLC+NKIH Sbjct 67 VQSGKTVIVSTATIALQRQLIDRDMPRLADALEGSLGRRPHFAILKGRNNYLCMNKIHTG 126 Query 128 VTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 +E P +ELFDP AV+ LGR+VQRLT W+S T +GDRDDL PGV D++W QVSV Sbjct 127 TA-----EEPPADELFDPFAVSRLGREVQRLTEWSSDTETGDRDDLAPGVSDKAWRQVSV 181 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 +ARECLG +RCP G +CF+ERAR A DVVVTNHALLAIDA+ A+LPEH ++V+DE Sbjct 182 TARECLGKSRCPVGEDCFAERARAEASQVDVVVTNHALLAIDAITGIAILPEHDVVVIDE 241 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVT+VA AEL ++T+ AARR +LV+ + RL+AA +++ + + RP R + Sbjct 242 AHELVDRVTNVATAELAASTISAAARRCAKLVEEQDADRLEAAGEGWAALLEELRPERWE 301 Query 308 CLDDEMATYLSALRDAASAARSAIDTG------SDTTTASVRAEAGAVLTEISDTASRIL 361 L A L+A+RDAA + R+AI SD A+ R A A + E+ D+A R+L Sbjct 302 ALPPGAAPALAAVRDAAWSLRTAIGPSRPGMALSDPEAAAARNTALASVEEVHDSAVRVL 361 Query 362 ASFAPAIP-DRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 ++F P R DVVWL +DN S R V+R+APLSV LL +++FA +T VLTSATLT+ Sbjct 362 SAFDEPDPAKRHDVVWLAADDNRGSIRRVVRMAPLSVGGLLRSRLFAESTVVLTSATLTV 421 Query 421 GGSFDAMATAWGLTADT---------------------PWRGLDVGSPFQHAKSGILYVA 459 GGSFD +A WGL A++ W LDVGSPF HA++GI+Y+A Sbjct 422 GGSFDGLAVNWGLPAESSVVIDPATATGSEAPSDASTLKWNALDVGSPFDHARAGIIYIA 481 Query 460 AHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQG 519 LPPPGRDG A L EIAEL+ AAGGRTLGLFSSMRAA+AA+EAMR+RL TP+LCQG Sbjct 482 KQLPPPGRDGLSPA-YLDEIAELVEAAGGRTLGLFSSMRAAKAASEAMRDRLDTPILCQG 540 Query 520 DDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRA 579 DDST LV F D TSLFGTLSLWQGVDVPGPSLSLV++DRIPFPRPDDPLL ARQ+A Sbjct 541 DDSTGALVRAFAGDEPTSLFGTLSLWQGVDVPGPSLSLVILDRIPFPRPDDPLLVARQKA 600 Query 580 VAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPP 639 V +RGGNGF++VAA+HAALLLAQG GRLLR V D+GVVAVLD R+ATARY +LRASLPP Sbjct 601 VESRGGNGFLSVAANHAALLLAQGVGRLLRSVDDKGVVAVLDPRLATARYAGYLRASLPP 660 Query 640 FWQTTNATQVRAALRRL 656 FW+T++ VR AL R+ Sbjct 661 FWETSDPEVVRKALGRI 677 >gi|111018448|ref|YP_701420.1| ATP-dependent helicase [Rhodococcus jostii RHA1] gi|110817978|gb|ABG93262.1| probable ATP-dependent helicase [Rhodococcus jostii RHA1] Length=682 Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/677 (60%), Positives = 497/677 (74%), Gaps = 34/677 (5%) Query 8 SVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRA 67 +VPELL AV +LGG R Q MA+AVAH+ +TGEHL VQAGTGTGKSLAYLVP++ A Sbjct 7 NVPELLRTAVRSLGGAERSNQLTMASAVAHSIDTGEHLAVQAGTGTGKSLAYLVPSVRHA 66 Query 68 LCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNS 127 + V+VSTATIALQRQL+DRD+P+L D+L ++L RRP FA+LKGR NYLC+NKIH Sbjct 67 VQSGKTVIVSTATIALQRQLIDRDMPRLADALEDSLGRRPHFAILKGRNNYLCMNKIHTG 126 Query 128 VTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 +E P +ELFDP AV+ LGR+VQRLT W+S T +GDRDDL PGV D++W QVSV Sbjct 127 SA-----EEPPTDELFDPFAVSRLGREVQRLTEWSSDTETGDRDDLTPGVSDKAWRQVSV 181 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 +ARECLG +RCP G +CF+ERAR A DVVVTNHALLAIDA+ A+LPEH ++V+DE Sbjct 182 TARECLGKSRCPVGEDCFAERARAEASQVDVVVTNHALLAIDAITGIAILPEHDVVVIDE 241 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVT+VA AEL ++T+ AARR +LV+ + RL+AA +++ + + RP R + Sbjct 242 AHELVDRVTNVATAELAASTISAAARRCAKLVEEQDADRLEAAGEGWAALLEELRPERWE 301 Query 308 CLDDEMATYLSALRDAASAARSAIDTG------SDTTTASVRAEAGAVLTEISDTASRIL 361 L A L+A+RDAA + R+AI SD A+ R A A + E+ D+A R+L Sbjct 302 ALPPGAAPALAAVRDAAWSLRTAIGPSRPGMALSDPEAAAARNTALASVEEVHDSAVRVL 361 Query 362 ASFAPAIP-DRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 ++F P R DVVWL +DN S R V+R+APLSV LL +++FA +T VLTSATLT+ Sbjct 362 SAFDEPDPAKRHDVVWLAADDNRGSIRRVVRMAPLSVGGLLRSRLFAESTVVLTSATLTV 421 Query 421 GGSFDAMATAWGLTADT---------------------PWRGLDVGSPFQHAKSGILYVA 459 GGSFD +A WGL A++ W LDVGSPF HA++GI+Y+A Sbjct 422 GGSFDGLAVNWGLPAESSVVIDPAMATGSEAPSDSGTLKWNALDVGSPFDHARAGIIYIA 481 Query 460 AHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQG 519 LPPPGRDG A L EIAEL+ AAGGRTLGLFSSMRAA+AA+EAMR+RL TP+LCQG Sbjct 482 KQLPPPGRDGLSPA-YLDEIAELVEAAGGRTLGLFSSMRAAKAASEAMRDRLDTPILCQG 540 Query 520 DDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRA 579 DDST LV F D TSLFGTLSLWQGVDVPGPSLSLV++DRIPFPRPDDPLL ARQ+A Sbjct 541 DDSTGALVRAFAGDEPTSLFGTLSLWQGVDVPGPSLSLVILDRIPFPRPDDPLLVARQKA 600 Query 580 VAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPP 639 V +RGGNGF++VAA+HAALLLAQG GRLLR V D+GVVAVLD R+ATARY +LRASLPP Sbjct 601 VESRGGNGFLSVAANHAALLLAQGVGRLLRSVDDKGVVAVLDPRLATARYAGYLRASLPP 660 Query 640 FWQTTNATQVRAALRRL 656 FW+T++ VR AL R+ Sbjct 661 FWETSDPEVVRKALGRI 677 >gi|226307374|ref|YP_002767334.1| ATP-dependent DNA helicase DinG [Rhodococcus erythropolis PR4] gi|226186491|dbj|BAH34595.1| probable ATP-dependent DNA helicase DinG [Rhodococcus erythropolis PR4] Length=682 Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/677 (58%), Positives = 488/677 (73%), Gaps = 34/677 (5%) Query 8 SVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRA 67 +VPELL AV +LGG R Q MA+AVAH+ +TGEHL VQAGTGTGKSLAYLVP++ A Sbjct 7 NVPELLQTAVRSLGGAERTSQLTMASAVAHSIDTGEHLAVQAGTGTGKSLAYLVPSLRHA 66 Query 68 LCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNS 127 + VVVSTATIALQRQLVDRDLP+L D+L L RR +FA+LKGR NYLC+NKIH Sbjct 67 VESGRTVVVSTATIALQRQLVDRDLPRLADALKKPLGRRAEFAILKGRNNYLCMNKIHTG 126 Query 128 VTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 + ++ P++ELFDP V+ LGR+V RLT W+S T +GDRD+L PGV D++W QVSV Sbjct 127 AS-----EQPPEDELFDPFTVSRLGREVVRLTEWSSDTETGDRDELVPGVSDQAWRQVSV 181 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 ++REC+G +CP G +CF+ERAR A ADVVVTNHALLAIDA+ +LP+H ++V+DE Sbjct 182 TSRECIGKNQCPVGEDCFAERARVEASKADVVVTNHALLAIDAITGIQILPDHDVVVIDE 241 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVT VA A+LT++++ AARR ++ + + RL+AA ++ + + RPGR + Sbjct 242 AHELVDRVTGVATADLTASSISAAARRCGKIAEEQDADRLEAAGEGWAGLLEELRPGRWE 301 Query 308 CLDDEMATYLSALRDAASAARSAI---DTGSDTTTASVRAEAGAVLT---EISDTASRIL 361 L D A L+A+RDAA + R+AI G A A L+ ++ D+A RIL Sbjct 302 GLPDGAAPALAAIRDAAWSLRTAIGPAKPGMAAADPEAAAARNAALSSVDDVHDSAVRIL 361 Query 362 ASFAPAIP-DRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 +F P R DVVWL ++ S R +R+APLSV LL +++FA +T VLTSATLT+ Sbjct 362 TAFDEPDPAKRKDVVWLSSDEFRGSVRRSVRMAPLSVGGLLRSRLFAESTVVLTSATLTV 421 Query 421 GGSFDAMATAWGLTADTP---------------------WRGLDVGSPFQHAKSGILYVA 459 GGSFD +A WGL A++ W LDVGSPF HAK+GI+Y+A Sbjct 422 GGSFDGLAVNWGLPAESSVRPDSGTAIGTEAPSDASAFRWNSLDVGSPFDHAKAGIIYIA 481 Query 460 AHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQG 519 HLP PGRDG S L EIAEL+ AAGGRTLGLFSSMRAA+AA+EAMRERL TP+LCQG Sbjct 482 RHLPTPGRDGL-SPVYLDEIAELVEAAGGRTLGLFSSMRAAKAASEAMRERLDTPILCQG 540 Query 520 DDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRA 579 DD+T TLV+ F D TSLFGTLSLWQGVDVPGPSLSLV++DRIPFPRPDDPLL ARQ+A Sbjct 541 DDATGTLVKAFAKDEPTSLFGTLSLWQGVDVPGPSLSLVILDRIPFPRPDDPLLMARQQA 600 Query 580 VAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPP 639 + + GGNGF++V+A+HAALLLAQG GRLLR D+GVVAVLD R+ATARY +LRASLPP Sbjct 601 IESHGGNGFLSVSANHAALLLAQGVGRLLRSTDDKGVVAVLDPRLATARYAGYLRASLPP 660 Query 640 FWQTTNATQVRAALRRL 656 FW+TTN VR AL R+ Sbjct 661 FWETTNPEVVRKALTRI 677 >gi|325002243|ref|ZP_08123355.1| helicase c2 [Pseudonocardia sp. P1] Length=683 Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/678 (59%), Positives = 483/678 (72%), Gaps = 36/678 (5%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 V ELL AV+++GG+RR GQ MA AV + +GEHL VQAGTGTGKSLAYLVPAI A+ Sbjct 9 VHELLETAVSSVGGSRREGQDRMADAVRRSLSSGEHLAVQAGTGTGKSLAYLVPAIRHAI 68 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 D VVVSTATIALQRQLVDRDLP++ SL L R P FA+LKGRRNYLCLNK+H Sbjct 69 ARDTTVVVSTATIALQRQLVDRDLPRVATSLKKVLGREPTFAILKGRRNYLCLNKLHG-- 126 Query 129 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 188 D DD+ +++LFD AV+ALGR+V+RL WAS T +GDRD+L PGV D +W QVSV+ Sbjct 127 ---DMDDDPLEDQLFDAFAVSALGRNVKRLHDWASDTETGDRDELVPGVPDTAWRQVSVT 183 Query 189 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 248 ARECLG +RCP G +CF+E+AR AG AD+VVTNHALLAIDA+ E+ VLPEH +++VDEA Sbjct 184 ARECLGASRCPVGEDCFAEKARAEAGRADIVVTNHALLAIDAMGEAQVLPEHDVVIVDEA 243 Query 249 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 308 HEL DRVT A AELT+ T+ AARR +LVD ++ RL A + + D P R + Sbjct 244 HELVDRVTGAATAELTAGTVATAARRCGKLVDQELADRLSEAGEGLGAVLEDLPPARWES 303 Query 309 LDDEMATYLSALRDAASAARSAID-----TGSDTTTASVRAEAGAVLTEISDTASRILAS 363 L + L+A+ AA+ R A+ +D A+ R A AVL E+S+T R++ + Sbjct 304 LPTPASGALNAILTAAAGCRQAMGGQRRADDADPDGAAARKLALAVLDEVSETCVRLVDT 363 Query 364 FAPAIP-DRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGG 422 F+ P R DVVWL + S V+RVAPLSV LL ++F TTVLTSATL +GG Sbjct 364 FSETDPAKRRDVVWLGEQGPDGSRYKVVRVAPLSVGGLLRERLFNSRTTVLTSATLALGG 423 Query 423 SFDAMATAWGLTA-------DTP-----------------WRGLDVGSPFQHAKSGILYV 458 SFDA+A WGL A DTP W+GLDVGSPF H KSGILY+ Sbjct 424 SFDALARQWGLPASQPKEAGDTPPGEPVGHGPVQDPEAPRWQGLDVGSPFAHGKSGILYL 483 Query 459 AAHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQ 518 A LP PGRDG S + L EI L+ AAGGRTLGLFSS RAA+ ATEA+R +L TP+LCQ Sbjct 484 AKRLPAPGRDGL-SPQTLDEIEGLVRAAGGRTLGLFSSTRAAKQATEALRGKLDTPLLCQ 542 Query 519 GDDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQR 578 GDDST LV++F D TSLFGTLSLWQGVDVPGPSLS V+IDRIPFPRPDDPL++ARQ+ Sbjct 543 GDDSTMLLVKRFAEDEETSLFGTLSLWQGVDVPGPSLSCVIIDRIPFPRPDDPLVAARQK 602 Query 579 AVAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLP 638 A +RGGNGF++V+A+HAALLLAQG+GRLLR DRGVVA+LD R+ATARYG FLRASLP Sbjct 603 ATDSRGGNGFLSVSATHAALLLAQGAGRLLRSTDDRGVVAILDPRIATARYGGFLRASLP 662 Query 639 PFWQTTNATQVRAALRRL 656 PFW+TT+ +V AL+RL Sbjct 663 PFWETTDVEKVHGALKRL 680 >gi|312139198|ref|YP_004006534.1| ATP-dependent DNA helicase [Rhodococcus equi 103S] gi|325673496|ref|ZP_08153187.1| ATP-dependent helicase [Rhodococcus equi ATCC 33707] gi|311888537|emb|CBH47849.1| ATP-dependent DNA helicase [Rhodococcus equi 103S] gi|325555517|gb|EGD25188.1| ATP-dependent helicase [Rhodococcus equi ATCC 33707] Length=685 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/678 (60%), Positives = 492/678 (73%), Gaps = 33/678 (4%) Query 8 SVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRA 67 +VP+LL +AV +LGG R+ Q MA+AVAH+ +TGEHL VQAGTGTGKSLAYLVP++ A Sbjct 7 NVPDLLKLAVRSLGGKERQNQLTMASAVAHSIDTGEHLAVQAGTGTGKSLAYLVPSVRHA 66 Query 68 LCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNS 127 + VVVSTATIALQRQLVDRD+P+L ++L AL R P+FA+LKGR NYLC+NKIH Sbjct 67 VESGRTVVVSTATIALQRQLVDRDMPRLAEALKPALGRLPRFAILKGRSNYLCMNKIHTG 126 Query 128 VTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 + D+ P ELFD AV+ LGR+VQRLT W+S T +GDRDDL PGV D++W QVSV Sbjct 127 MA----QDDPPDAELFDAFAVSRLGREVQRLTKWSSDTETGDRDDLVPGVSDQAWRQVSV 182 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 SARECLG +RCP G +CF+ERAR A DVVVTNHA+LAIDA++ AVLPEH ++V+DE Sbjct 183 SARECLGKSRCPVGEDCFAERARAEAAQVDVVVTNHAMLAIDAISGIAVLPEHDVVVIDE 242 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVT VA AELT+ + AARR +LV+ + RL+AA+ ++ + + GR D Sbjct 243 AHELVDRVTGVATAELTAPAISGAARRAVKLVEEQDVDRLEAAAEGWADLLEELPAGRWD 302 Query 308 CLDDEMATYLSALRDAASAARSAIDTGS------DTTTASVRAEAGAVLTEISDTASRIL 361 L D + L+A+RDAA R+AI D A+ R A + + EI D+A R+L Sbjct 303 ALPDGVGMALAAVRDAAWNVRTAIGPSKPGMAAADPEAAAARNAALSAIDEIHDSAVRVL 362 Query 362 ASFAPAIP-DRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 +F P R DVVWL EDN + R V+R+APLSV LL +FA +T VLTSATLT+ Sbjct 363 TAFDEPDPAKRRDVVWLAVEDNRGNIRRVVRMAPLSVGGLLRASLFAESTVVLTSATLTV 422 Query 421 GGSFDAMATAWGLTADTP---------------------WRGLDVGSPFQHAKSGILYVA 459 GGSFD +A WGL ++P W LDVGSPF HAKSGI+YVA Sbjct 423 GGSFDGLAVNWGLPPESPSRSDTGTATGKEAPSDAGALRWNSLDVGSPFDHAKSGIMYVA 482 Query 460 AHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQG 519 HLPPPGRDG A + EI EL+TAAGGRTLGLFSSMRAA+AA E MR RL PVLCQG Sbjct 483 RHLPPPGRDGLSPA-FMDEIEELVTAAGGRTLGLFSSMRAAKAAAEEMRGRLDVPVLCQG 541 Query 520 DDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRA 579 DD+T TLV+KF D T+LFGTLSLWQGVDVPGPSLSLV++DRIPFPRPDDPLL ARQ+A Sbjct 542 DDATGTLVKKFAEDEPTTLFGTLSLWQGVDVPGPSLSLVILDRIPFPRPDDPLLVARQQA 601 Query 580 VAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPP 639 V +RGGNGF++VAA+HAALLLAQG GRLLR D+GVVA+LDSR+ATARYG +LRASLPP Sbjct 602 VESRGGNGFLSVAANHAALLLAQGVGRLLRSTDDKGVVAILDSRLATARYGGYLRASLPP 661 Query 640 FWQTTNATQVRAALRRLA 657 FW+T + VR AL R+A Sbjct 662 FWETADPKVVRQALARIA 679 >gi|229494049|ref|ZP_04387818.1| DeaD/DeaH family helicase [Rhodococcus erythropolis SK121] gi|229319118|gb|EEN84970.1| DeaD/DeaH family helicase [Rhodococcus erythropolis SK121] Length=682 Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/677 (58%), Positives = 486/677 (72%), Gaps = 34/677 (5%) Query 8 SVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRA 67 +VPELL AV +LGG R Q MA+AVAH+ +TGEHL VQAGTGTGKSLAYLVP++ A Sbjct 7 NVPELLQTAVRSLGGAERTSQLTMASAVAHSIDTGEHLAVQAGTGTGKSLAYLVPSLRHA 66 Query 68 LCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNS 127 + VVVSTATIALQRQLVDRDLP+L D+L L RR +FA+LKGR NYLC+NKIH Sbjct 67 VESGRTVVVSTATIALQRQLVDRDLPRLADALKKPLGRRAEFAILKGRNNYLCMNKIHTG 126 Query 128 VTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 + ++ P++ELFDP V+ LGR+V RLT W+S T +GDRD+L PGV D++W QVSV Sbjct 127 AS-----EQPPEDELFDPFTVSRLGREVVRLTEWSSDTETGDRDELVPGVSDQAWRQVSV 181 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 ++REC+G +CP G +CF+ERAR A ADVVVTNHALLAIDA+ +LP+H ++V+DE Sbjct 182 TSRECIGKNQCPVGEDCFAERARVEASKADVVVTNHALLAIDAITGIQILPDHDVVVIDE 241 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVT VA A+LT+A++ AARR ++ + + RL+AA ++ + + RPGR + Sbjct 242 AHELVDRVTGVATADLTAASISAAARRCGKIAEEQDADRLEAAGEGWAGLLEELRPGRWE 301 Query 308 CLDDEMATYLSALRDAASAARSAI---DTGSDTTTASVRAEAGAVLT---EISDTASRIL 361 L D A L+A+RDAA + R+AI G A A L+ ++ D+A RIL Sbjct 302 GLPDGAAPALAAIRDAAWSLRTAIGPAKPGMAAADPEAAAARNAALSSVDDVHDSAVRIL 361 Query 362 ASFAPAIP-DRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTI 420 +F P R DVVWL ++ S R +R+APLSV LL +++FA +T VLTSATLT+ Sbjct 362 TAFDEPDPAKRKDVVWLSSDEFRGSVRRSVRMAPLSVGGLLRSRLFAESTVVLTSATLTV 421 Query 421 GGSFDAMATAWGLTADTP---------------------WRGLDVGSPFQHAKSGILYVA 459 GGSFD +A WGL A++ W LDVGSPF HAK+GI+Y+A Sbjct 422 GGSFDGLAVNWGLPAESSARPDSGTAIGTEAPSDASTFRWNSLDVGSPFDHAKAGIIYIA 481 Query 460 AHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQG 519 HLP PGRDG L EIAEL+ AAGGR LGLFSSMRAA+AA+EAMRERL TP+LCQG Sbjct 482 RHLPTPGRDGLAPV-YLDEIAELVEAAGGRALGLFSSMRAAKAASEAMRERLDTPILCQG 540 Query 520 DDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRA 579 DD+T TLV+ F D TSLFGTLSLWQGVDVPGPSLSLV++DRIPFPRPDDPLL ARQ+A Sbjct 541 DDATGTLVKAFAKDEPTSLFGTLSLWQGVDVPGPSLSLVILDRIPFPRPDDPLLMARQQA 600 Query 580 VAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPP 639 + + GGNGF++V+A+HAALLLAQG GRLLR D+GVVAVLD R+ATARY +LRASLPP Sbjct 601 IESHGGNGFLSVSANHAALLLAQGVGRLLRSTDDKGVVAVLDPRLATARYAGYLRASLPP 660 Query 640 FWQTTNATQVRAALRRL 656 FW+TTN VR AL R+ Sbjct 661 FWETTNPEVVRKALTRI 677 >gi|256375137|ref|YP_003098797.1| helicase c2 [Actinosynnema mirum DSM 43827] gi|255919440|gb|ACU34951.1| helicase c2 [Actinosynnema mirum DSM 43827] Length=681 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/685 (58%), Positives = 485/685 (71%), Gaps = 43/685 (6%) Query 8 SVPE---LLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAI 64 +VP+ LLAIAV A+GG R GQ +MA AV + TGEHL VQAGTGTGKSLAYLVPA+ Sbjct 7 TVPDTRALLAIAVKAVGGAEREGQVDMALAVERSIRTGEHLAVQAGTGTGKSLAYLVPAL 66 Query 65 IRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKI 124 A+ +++ VV+STATIALQRQLVDRDLP+L +L L R P+FA+LKGRRNYLC++++ Sbjct 67 RHAVAEESTVVISTATIALQRQLVDRDLPRLAKALRKELGREPRFAILKGRRNYLCMHRL 126 Query 125 HNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQ 184 H+ DE LFDP AV+ LGR+V+RL W+S T +GDRD+L PGV D++W Q Sbjct 127 HSGAP-----DEPEDAALFDPFAVSKLGREVKRLHEWSSDTETGDRDELVPGVPDQAWKQ 181 Query 185 VSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLV 244 VSV+ARECLGV++CP G++CF+E+AR AG ADVVVTNHA+LAIDA+ VLP+H ++V Sbjct 182 VSVTARECLGVSKCPIGTDCFAEKARAEAGRADVVVTNHAMLAIDALEGYQVLPDHDVVV 241 Query 245 VDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPG 304 +DEAH+L DRVTSVA EL SA + AARR +LVD V RL A + DA G Sbjct 242 IDEAHDLVDRVTSVATEELGSAAITTAARRCGKLVDQAVADRLAEAGDGLGMLLEDAPAG 301 Query 305 RIDCLDDEMATYLSALRDAASAARSAI--DTGSDTTTASVRAEAGAVLTEISDTASRILA 362 R++ L +AT ++A+RDAA +++ + D ++ R A ++L +I D A R+L Sbjct 302 RLESLPKALATTVAAVRDAARVCITSLGPERKEDVEGSTARKLALSLLDDIHDCAVRVLE 361 Query 363 SFAPAIPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGG 422 +F D DVVW+ + A VLRVAPL V LL ++F + TTVLTSATLT+GG Sbjct 362 AF----DDEHDVVWVSGDFGGNRA-PVLRVAPLGVGGLLRERLFGKRTTVLTSATLTLGG 416 Query 423 SFDAMATAWGLTA--------------------DTP-------WRGLDVGSPFQHAKSGI 455 +FD +A WGL A + P W GLDVGSPF+H SGI Sbjct 417 TFDTLARQWGLPAASGARKAEGSGKAAGTATDKEPPSDLGAVRWTGLDVGSPFEHGSSGI 476 Query 456 LYVAAHLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPV 515 LYVA HLPPPGRDG A L E+ L+ AAGGR LGLFSSMRAA+AATEA+R R+ PV Sbjct 477 LYVARHLPPPGRDGLPPA-YLDELEGLVNAAGGRALGLFSSMRAAKAATEALRGRVDFPV 535 Query 516 LCQGDDSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSA 575 LCQGDD T LV++F DA T LFGTLSLWQGVDVPGPSL LV++DRIPFPRPDDPL SA Sbjct 536 LCQGDDQTGQLVKRFAEDARTCLFGTLSLWQGVDVPGPSLQLVVMDRIPFPRPDDPLASA 595 Query 576 RQRAVAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRA 635 RQ+AV +RGGNGF+TV+A+HAALLLAQG+GRLLR + D+GVVAVLD R+ATARYG FLRA Sbjct 596 RQKAVDSRGGNGFLTVSATHAALLLAQGAGRLLRSMNDKGVVAVLDPRLATARYGGFLRA 655 Query 636 SLPPFWQTTNATQVRAALRRLARAD 660 SLPPFW T + V+AAL+RL A+ Sbjct 656 SLPPFWTTYDTEVVKAALKRLDAAN 680 >gi|326385037|ref|ZP_08206709.1| helicase c2 [Gordonia neofelifaecis NRRL B-59395] gi|326196251|gb|EGD53453.1| helicase c2 [Gordonia neofelifaecis NRRL B-59395] Length=669 Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/670 (57%), Positives = 462/670 (69%), Gaps = 22/670 (3%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 +PELL +AV +LGG RR GQ MA AV A E HL VQAGTGTGKSLAYL+P++ A+ Sbjct 6 IPELLTVAVESLGGARRDGQLAMAEAVGDAIENDHHLAVQAGTGTGKSLAYLIPSVRHAV 65 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 + VVVSTATIALQRQL +RDLP+L +L L R P FA+LKGR NYLCLNKIH+ V Sbjct 66 DANETVVVSTATIALQRQLTERDLPRLAGALKEPLGREPSFAILKGRANYLCLNKIHSGV 125 Query 129 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 188 DE P ELFD ++ +GR+V RL W S T +GDRDDL PGV D+SW QVSVS Sbjct 126 A-----DEDPNAELFDAFDLSRMGREVTRLREWTSDTETGDRDDLSPGVSDQSWRQVSVS 180 Query 189 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 248 +RECLG A CP+G +CF+E AR AG +D+VVTNHA+LAIDA++ + +LPEHR++V+DEA Sbjct 181 SRECLGAANCPYGEDCFAELARKKAGASDIVVTNHAMLAIDAMSPATILPEHRVVVIDEA 240 Query 249 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 308 HEL DR+TSV E+++A + ARR+ +L+D L A + D G Sbjct 241 HELVDRITSVTTEEISAAGVSQVARRLGKLIDDDTADALVGAGEQLELLLEDCPVGEWTR 300 Query 309 LDDEMATYLSALRDAASAARSAIDTGS--------DTTTASVRAEAGAVLTEISDTASRI 360 L L++LRD ARSA+ D A+ R A + + D+ R+ Sbjct 301 LPSGAPEILASLRDRLWNARSAVGPAPSASSGSGSDPEAAAARQMALSAADSLHDSVVRV 360 Query 361 LASFAPA-IPDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLT 419 L F A I R DVVWL + + R LR+APLSVA LL T +F +T +LTSATLT Sbjct 361 LTVFGEADITKRHDVVWLSADRVRSTVRRTLRIAPLSVAGLLRTSLFTDSTVILTSATLT 420 Query 420 IGGSFDAMATAWGLTAD-------TPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGS 472 IGG+FDA+A WGL A WRG+D GSPF + +S ILYV HL PGRDG Sbjct 421 IGGNFDALARTWGLPAHGGKDVEAAGWRGMDAGSPFDYPRSAILYVGKHLRAPGRDGIAE 480 Query 473 AEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTA 532 + L E+ +L+ AAGGRTLGLFSSMRAA+ ATE +R+R+ P+LCQGDD+TSTL+EKF A Sbjct 481 S-TLDEMVDLMNAAGGRTLGLFSSMRAAKEATEKLRDRVGFPILCQGDDATSTLIEKFAA 539 Query 533 DAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVA 592 D AT LFGTLSLWQGVDVPGPSL LV+IDRIPFPRPDDPLLSARQR V ARGGNGF+TV+ Sbjct 540 DEATCLFGTLSLWQGVDVPGPSLRLVMIDRIPFPRPDDPLLSARQRDVDARGGNGFLTVS 599 Query 593 ASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAA 652 A+HAALLLAQG+GRLLR DRGVVAVLDSR+ATARY +L A LPPFW+TT+ VRAA Sbjct 600 ANHAALLLAQGAGRLLRATDDRGVVAVLDSRLATARYAGYLLAGLPPFWRTTDPKAVRAA 659 Query 653 LRRLARADAK 662 L RL A K Sbjct 660 LSRLTTAAVK 669 >gi|291005578|ref|ZP_06563551.1| ATP-dependent DNA helicase-related protein [Saccharopolyspora erythraea NRRL 2338] Length=723 Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/669 (58%), Positives = 477/669 (72%), Gaps = 34/669 (5%) Query 12 LLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDD 71 L+ IAVAA+GGT R GQ +MA AV H+ +GEHL VQAGTGTGKSLAYLVPAI A+ ++ Sbjct 60 LMEIAVAAVGGTERTGQSQMAEAVEHSIRSGEHLAVQAGTGTGKSLAYLVPAIRHAVAEE 119 Query 72 APVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTAS 131 V+VSTATIALQRQLVDRDLP+L +LT+AL R PKFA+LKGRRNYLCLN++ Sbjct 120 TTVIVSTATIALQRQLVDRDLPRLATALTDALGRAPKFAILKGRRNYLCLNRVDGGAP-- 177 Query 132 DHDDERPQE-ELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSAR 190 E P E LFDP A +AL R V+RL W+S T +GDRD+L PGV D++W QVSV+A+ Sbjct 178 ----EEPDEGALFDPFAASALERQVKRLREWSSETETGDRDELVPGVTDQAWRQVSVTAK 233 Query 191 ECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAHE 250 ECLG RCP G++CF+ERAR AG ADVVVTNHALLAIDA+ + +LPEH +++VDEAH+ Sbjct 234 ECLGAHRCPVGTDCFAERARAEAGRADVVVTNHALLAIDALDDRPILPEHDVVMVDEAHD 293 Query 251 LADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCLD 310 L DRVTS A ELT+ ++ +AARR R +D ++ RL A + + DA+P R++ L Sbjct 294 LVDRVTSAATGELTAGSVKLAARRCGRAIDQEIADRLDEAGEGLDAVLQDAQPRRLEELP 353 Query 311 DEMATYLSALRDAASAARSAI--DTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI 368 ++ L+A RDAA+A +A+ + D ++ R A A+ ++ DTA R+L +F Sbjct 354 RDLGGALAATRDAAAACVTALGPERKEDVEGSTARKLALALTEDVHDTAVRVLEAFDEED 413 Query 369 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA 428 R DVVW+ + N +RVAPL V LL ++F + TTVLTSATL +GGSFD +A Sbjct 414 DRRRDVVWVAADPNRPP---TVRVAPLGVGGLLRERLFGQRTTVLTSATLALGGSFDTLA 470 Query 429 TAWGLTADT---------------------PWRGLDVGSPFQHAKSGILYVAAHLPPPGR 467 WGL + W GLDVGSPF+H +SGILY+A HLP PGR Sbjct 471 RQWGLPPEQRARKAEGAATDKEVPSDDGGPKWTGLDVGSPFEHQRSGILYIARHLPQPGR 530 Query 468 DGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLV 527 DG + L E+ EL+ AAGGRTLGLFSSMRAAR A+E +R+RL TPVLCQG+DST+ LV Sbjct 531 DGL-PPQYLDELTELVRAAGGRTLGLFSSMRAARQASEELRQRLDTPVLCQGEDSTALLV 589 Query 528 EKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNG 587 KF D TSLFGTLSLWQGVDVPG SL LV++DRIPFPRPDDPL SARQ+AV+ GGNG Sbjct 590 TKFADDPRTSLFGTLSLWQGVDVPGQSLQLVVMDRIPFPRPDDPLASARQKAVSEHGGNG 649 Query 588 FMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNAT 647 F+T+A +HAALLLAQG+GRLLR + DRGV+AVLD R+ATARYG FLRASLPPFW T + Sbjct 650 FLTIAGTHAALLLAQGAGRLLRSIDDRGVIAVLDPRLATARYGGFLRASLPPFWTTHDPE 709 Query 648 QVRAALRRL 656 VR ALRRL Sbjct 710 VVRGALRRL 718 >gi|134097786|ref|YP_001103447.1| ATP-dependent DNA helicase-related protein [Saccharopolyspora erythraea NRRL 2338] gi|133910409|emb|CAM00522.1| probable ATP-dependent DNA helicase-related protein [Saccharopolyspora erythraea NRRL 2338] Length=664 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/669 (58%), Positives = 477/669 (72%), Gaps = 34/669 (5%) Query 12 LLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDD 71 ++ IAVAA+GGT R GQ +MA AV H+ +GEHL VQAGTGTGKSLAYLVPAI A+ ++ Sbjct 1 MMEIAVAAVGGTERTGQSQMAEAVEHSIRSGEHLAVQAGTGTGKSLAYLVPAIRHAVAEE 60 Query 72 APVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTAS 131 V+VSTATIALQRQLVDRDLP+L +LT+AL R PKFA+LKGRRNYLCLN++ Sbjct 61 TTVIVSTATIALQRQLVDRDLPRLATALTDALGRAPKFAILKGRRNYLCLNRVDGGAP-- 118 Query 132 DHDDERPQE-ELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSAR 190 E P E LFDP A +AL R V+RL W+S T +GDRD+L PGV D++W QVSV+A+ Sbjct 119 ----EEPDEGALFDPFAASALERQVKRLREWSSETETGDRDELVPGVTDQAWRQVSVTAK 174 Query 191 ECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAHE 250 ECLG RCP G++CF+ERAR AG ADVVVTNHALLAIDA+ + +LPEH +++VDEAH+ Sbjct 175 ECLGAHRCPVGTDCFAERARAEAGRADVVVTNHALLAIDALDDRPILPEHDVVMVDEAHD 234 Query 251 LADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCLD 310 L DRVTS A ELT+ ++ +AARR R +D ++ RL A + + DA+P R++ L Sbjct 235 LVDRVTSAATGELTAGSVKLAARRCGRAIDQEIADRLDEAGEGLDAVLQDAQPRRLEELP 294 Query 311 DEMATYLSALRDAASAARSAI--DTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAI 368 ++ L+A RDAA+A +A+ + D ++ R A A+ ++ DTA R+L +F Sbjct 295 RDLGGALAATRDAAAACVTALGPERKEDVEGSTARKLALALTEDVHDTAVRVLEAFDEED 354 Query 369 PDRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMA 428 R DVVW+ + N +RVAPL V LL ++F + TTVLTSATL +GGSFD +A Sbjct 355 DRRRDVVWVAADPNRPP---TVRVAPLGVGGLLRERLFGQRTTVLTSATLALGGSFDTLA 411 Query 429 TAWGLTADT---------------------PWRGLDVGSPFQHAKSGILYVAAHLPPPGR 467 WGL + W GLDVGSPF+H +SGILY+A HLP PGR Sbjct 412 RQWGLPPEQRARKAEGAATDKEVPSDDGGPKWTGLDVGSPFEHQRSGILYIARHLPQPGR 471 Query 468 DGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLV 527 DG + L E+ EL+ AAGGRTLGLFSSMRAAR A+E +R+RL TPVLCQG+DST+ LV Sbjct 472 DGL-PPQYLDELTELVRAAGGRTLGLFSSMRAARQASEELRQRLDTPVLCQGEDSTALLV 530 Query 528 EKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNG 587 KF D TSLFGTLSLWQGVDVPG SL LV++DRIPFPRPDDPL SARQ+AV+ GGNG Sbjct 531 TKFADDPRTSLFGTLSLWQGVDVPGQSLQLVVMDRIPFPRPDDPLASARQKAVSEHGGNG 590 Query 588 FMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNAT 647 F+T+A +HAALLLAQG+GRLLR + DRGV+AVLD R+ATARYG FLRASLPPFW T + Sbjct 591 FLTIAGTHAALLLAQGAGRLLRSIDDRGVIAVLDPRLATARYGGFLRASLPPFWTTHDPE 650 Query 648 QVRAALRRL 656 VR ALRRL Sbjct 651 VVRGALRRL 659 >gi|300789542|ref|YP_003769833.1| ATP-dependent DNA helicase DinG [Amycolatopsis mediterranei U32] gi|299799056|gb|ADJ49431.1| ATP-dependent DNA helicase DinG [Amycolatopsis mediterranei U32] Length=682 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/673 (59%), Positives = 476/673 (71%), Gaps = 31/673 (4%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 V ELL AV ++GG R GQ +MA AV A TGEHL VQAGTGTGKSLAYLVPAI A+ Sbjct 10 VLELLTHAVESVGGAERPGQVQMADAVGRAIRTGEHLAVQAGTGTGKSLAYLVPAIRHAV 69 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 +A VVVSTATIALQRQLVDRDLP+L +L L R P FA+LKGRRNY+CL+++ + Sbjct 70 EKEATVVVSTATIALQRQLVDRDLPRLAKALKKPLGREPTFAILKGRRNYMCLHRLDSGA 129 Query 129 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 188 DE +LFDP AV+ LG++V RL WAS T +GDRD+L PGV D++W QVSV+ Sbjct 130 P-----DEPEDAQLFDPFAVSRLGKEVTRLREWASDTETGDRDELVPGVTDQAWRQVSVT 184 Query 189 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 248 A+ECLG +RCP G++CF+E+AR AG ADV+VTNHALLAIDA+ VLP+H ++++DEA Sbjct 185 AKECLGASRCPIGTDCFAEKARAEAGRADVIVTNHALLAIDALQGYQVLPDHDVVIIDEA 244 Query 249 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 308 H+L DRVTSVA ELTSA AARR +L+D V L A + I D GR+D Sbjct 245 HDLVDRVTSVATGELTSAMCASAARRCGKLIDADVADGLLEAGDGLALIIDDLPAGRMDE 304 Query 309 LDDEMATYLSALRDAASAARSAI--DTGSDTTTASVRAEAGAVLTEISDTASRILASFAP 366 L + + A+RDAA +A+ D D A+ R A ++L E+ DTA R+L +F Sbjct 305 LPRPLQGAIPAIRDAAHRCITALGSDRKEDVEGATARKLARSLLDEVHDTAVRLLEAFDE 364 Query 367 AIPDRSDVVWLEHEDNHESARA-VLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFD 425 + DVVWL + + R L+VAPL VA LL +VF + TT+LTSATLT+GG+FD Sbjct 365 DQAHQRDVVWLSGDKYSSNPRPPALKVAPLGVAGLLRERVFNQHTTILTSATLTLGGTFD 424 Query 426 AMATAWGL---------------TADTP-------WRGLDVGSPFQHAKSGILYVAAHLP 463 MA WGL + P W GLDVGSPF H ++GILY+A HLP Sbjct 425 TMARQWGLPPGAARVEQAPGAATEKEAPSDDSGPKWTGLDVGSPFDHRRNGILYLAKHLP 484 Query 464 PPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDST 523 PPGRDG S+ + E+AELI AAGGRTLGLFSSMRAA+ ATE MRERL P+LCQGDD+T Sbjct 485 PPGRDGLTSS-TMDELAELIEAAGGRTLGLFSSMRAAKQATEEMRERLDFPILCQGDDAT 543 Query 524 STLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAAR 583 S LV+KF+ D T LFGTLSLWQGVDVPGPSL LV++DRIPFPRPDDP+ SARQRAV AR Sbjct 544 SLLVQKFSEDVRTCLFGTLSLWQGVDVPGPSLQLVVVDRIPFPRPDDPVSSARQRAVEAR 603 Query 584 GGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQT 643 GGNGF+TVAA+HAALLLAQG+GRL R VTDRGVVAVLDSR+A ARYG FLRASLPPFW T Sbjct 604 GGNGFLTVAATHAALLLAQGTGRLHRSVTDRGVVAVLDSRLANARYGGFLRASLPPFWPT 663 Query 644 TNATQVRAALRRL 656 + VR ALRRL Sbjct 664 MDPKVVREALRRL 676 >gi|257056900|ref|YP_003134732.1| DNA helicase, Rad3 [Saccharomonospora viridis DSM 43017] gi|256586772|gb|ACU97905.1| DNA helicase, Rad3 [Saccharomonospora viridis DSM 43017] Length=684 Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/675 (59%), Positives = 473/675 (71%), Gaps = 32/675 (4%) Query 8 SVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRA 67 SV ELL+ AV A+GGT R GQ MA AV HA TGEHL VQAGTGTGKSLAYLVPAI A Sbjct 10 SVRELLSHAVEAVGGTEREGQLRMADAVDHAIRTGEHLAVQAGTGTGKSLAYLVPAIRHA 69 Query 68 LCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNS 127 + D VVVSTATIALQRQLVDRDLP+L +L L P FA+LKGRRNYLCL ++HN Sbjct 70 VACDTTVVVSTATIALQRQLVDRDLPRLAKALKKPLGVEPTFAILKGRRNYLCLYRVHNG 129 Query 128 VTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSV 187 V +D+ LFDP AV+ LGR+V+RL W+S T +GDRD+L PGV +++W QVSV Sbjct 130 V-----EDDPEDTALFDPFAVSRLGREVKRLHQWSSDTETGDRDELVPGVSEQAWRQVSV 184 Query 188 SARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDE 247 +A+ECLG RCP G +CF+E AR A A++VVTNHALLAIDA+ + VLPEH + ++DE Sbjct 185 TAKECLGATRCPVGDDCFAELARAEASRANIVVTNHALLAIDALQDYQVLPEHDVTIIDE 244 Query 248 AHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRID 307 AHEL DRVTS A A+L+ A + AARR RLVD + RL S + D GR+D Sbjct 245 AHELVDRVTSTATADLSPAMVSTAARRCGRLVDADIADRLLETGEGLSLMLEDVPAGRLD 304 Query 308 CLDDEMATYLSALRDAASAARSAI--DTGSDTTTASVRAEAGAVLTEISDTASRILASFA 365 L D + L+A+RDAA A +A+ D D A+ R A + L ++ DTA R+L +F Sbjct 305 VLPDALGGALAAVRDAAHACITALGSDRREDPEEAAKRKLARSALDDVHDTAVRLLEAFE 364 Query 366 PAIPDRSDVVWLEHEDNHESARA-VLRVAPLSVAELLATQVFARATTVLTSATLTIGGSF 424 + +R DVVW + S R L +APLSV LL +VF +TTVLTSATL +GG+F Sbjct 365 DELSERRDVVWCSGGRHTASPRPPALHIAPLSVGGLLRERVFGTSTTVLTSATLALGGTF 424 Query 425 DAMATAWGL--------------TADTP---------WRGLDVGSPFQHAKSGILYVAAH 461 D +A WGL T P WRGLDVGSPF + ++GILY+A H Sbjct 425 DTLARQWGLPPVSQPTEQAQGAATEKPPPSDVDPGPRWRGLDVGSPFDYRRNGILYIAGH 484 Query 462 LPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDD 521 LP PGRDG A L EIAELI AAGGRTLGLFSSMRAA+ ATE +R+R++ P+LCQG+D Sbjct 485 LPRPGRDGLSQA-ALDEIAELIDAAGGRTLGLFSSMRAAKQATEELRDRVAHPILCQGED 543 Query 522 STSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVA 581 STS LV KF D T LFGTLSLWQGVDVPGPSLSLV++DR+PFPRPDDP+ SARQRAV Sbjct 544 STSLLVNKFAEDPRTCLFGTLSLWQGVDVPGPSLSLVIVDRLPFPRPDDPVASARQRAVE 603 Query 582 ARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFW 641 ARGGNGF+TVAA+HAALLLAQG GRL R +D+GVVAVLDSR+ATARYG F+RASLPP W Sbjct 604 ARGGNGFLTVAATHAALLLAQGVGRLHRASSDKGVVAVLDSRLATARYGGFIRASLPPLW 663 Query 642 QTTNATQVRAALRRL 656 T A VR ALRRL Sbjct 664 PTQRADVVRDALRRL 678 >gi|302529737|ref|ZP_07282079.1| ATP-dependent helicase [Streptomyces sp. AA4] gi|302438632|gb|EFL10448.1| ATP-dependent helicase [Streptomyces sp. AA4] Length=666 Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/666 (59%), Positives = 469/666 (71%), Gaps = 32/666 (4%) Query 17 VAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDDAPVVV 76 + ++GG R GQ +MA AV HA TGEHL VQAGTGTGKSLAYLVPAI A+ D VVV Sbjct 1 MESVGGAERPGQVKMADAVGHAIRTGEHLAVQAGTGTGKSLAYLVPAIRHAVEKDTTVVV 60 Query 77 STATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTASDHDDE 136 STATIALQRQLVDRDLP+L +L L R P FA+LKGRRNYLCL+++ DE Sbjct 61 STATIALQRQLVDRDLPRLAKALKKPLGREPTFAILKGRRNYLCLHRLDTGPA-----DE 115 Query 137 RPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSARECLGVA 196 +LFDP AV+ LG++V RL W S T +GDRD+L PGV D++W QVSV+ARECLG A Sbjct 116 PEDAQLFDPFAVSRLGKEVTRLHEWVSDTETGDRDELVPGVSDQAWRQVSVTARECLGAA 175 Query 197 RCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAHELADRVT 256 +CP G++CF+ERAR AG ADVVVTNHALLAIDA+ VLP+H L+++DEAH+L DRVT Sbjct 176 KCPVGTDCFAERARAEAGKADVVVTNHALLAIDALQGYQVLPDHDLVIIDEAHDLVDRVT 235 Query 257 SVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCLDDEMATY 316 SVA ELTSA + AARR +L+D + RL +S + + D GR+D L + Sbjct 236 SVATGELTSAMVSAAARRCGKLIDAGIADRLLESSDGLALILDDIPAGRLDALPRPLQGA 295 Query 317 LSALRDAASAARSAI--DTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAIPDRSDV 374 + A+RDAA +A+ D D A+ R A ++L E+ DTA R+L ++ + + DV Sbjct 296 IPAVRDAAKECLTALGSDRKEDVGEATARKLARSLLEEVHDTAVRLLDAYDEDLAHQRDV 355 Query 375 VWLEHEDNHESARA-VLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMATAWGL 433 VWL + + R L+VAPL VA LL +VF + TTVLTSATLT+GG FD MA WGL Sbjct 356 VWLTGDKYSANPRPPALKVAPLGVAGLLRERVFNQHTTVLTSATLTLGGEFDTMARQWGL 415 Query 434 T---------------------ADT--PWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGS 470 DT W GLDVGSPF H ++GILY+A HLPPPGRDG Sbjct 416 PPGGARVVKSPGTATDKEAPSDEDTGPKWTGLDVGSPFDHRRNGILYLAKHLPPPGRDGL 475 Query 471 GSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKF 530 + + E+A L+ AAGGRTLGLFSSMRAA+ A EAMRERL P+LCQGDD+T LV +F Sbjct 476 AES-TMDELAGLVEAAGGRTLGLFSSMRAAKQAAEAMRERLDHPILCQGDDATPLLVRQF 534 Query 531 TADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMT 590 DA T LFGTL+LWQGVDVPGPSL LV++DRIPFPRPDDP+ SARQRAV ARGGNGF+T Sbjct 535 AEDARTCLFGTLTLWQGVDVPGPSLQLVVVDRIPFPRPDDPVQSARQRAVEARGGNGFLT 594 Query 591 VAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVR 650 VAA+HAALLLAQG+GRL R VTDRGVVAVLDSR+ATARYG FLRASLPPFW TT+ R Sbjct 595 VAATHAALLLAQGTGRLHRSVTDRGVVAVLDSRLATARYGGFLRASLPPFWPTTDPQVAR 654 Query 651 AALRRL 656 AL+RL Sbjct 655 DALKRL 660 >gi|271967790|ref|YP_003341986.1| ATP-dependent helicase [Streptosporangium roseum DSM 43021] gi|270510965|gb|ACZ89243.1| putative ATP-dependent helicase [Streptosporangium roseum DSM 43021] Length=674 Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/661 (59%), Positives = 471/661 (72%), Gaps = 21/661 (3%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 V ELL+ AV A+GG R GQ +M AV H+ ++G+HL VQAGTGTGKSLAYL+P+I A+ Sbjct 21 VEELLSTAVEAVGGVERPGQIKMVQAVQHSIQSGDHLAVQAGTGTGKSLAYLIPSIRHAM 80 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 VVVSTATIALQRQLVDRDLP+L ++L LP P +A+LKGRRNYLC K Sbjct 81 TSKGAVVVSTATIALQRQLVDRDLPRLSEALAPQLPHEPTYAILKGRRNYLCRYK----A 136 Query 129 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 188 +A DDE Q++LFDP V+ GR VQR+ WA T +GDRD+L PGV +++W Q SVS Sbjct 137 SAGWPDDE--QDQLFDPREVSLTGRMVQRIQEWAQETETGDRDELVPGVNEQAWRQFSVS 194 Query 189 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 248 ARECLG RCP G ECF+E AR AG +DVVVTNHALLAIDA+ + +LPEH ++VVDEA Sbjct 195 ARECLGATRCPSGMECFAELARARAGESDVVVTNHALLAIDAMEDFPLLPEHEVVVVDEA 254 Query 249 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 308 HEL DRVTSV EL+ + +AARR+ +L++P + RL A + + A GR+D Sbjct 255 HELVDRVTSVVTGELSETMVALAARRVGKLIEPHLGDRLVEAGEDLKALLAVAPAGRLDE 314 Query 309 LDDEMATYLSALRDAASAARSAI-----DTGSDTTTASVRAEAGAVLTEISDTASRILAS 363 L + + L+ +RD+A +A+ D A +R A L E+ DTA R+L + Sbjct 315 LPEVLGLTLALVRDSAWGCITALGPRMSSDKDDPEGAGLRKAAFTALDEVHDTAQRMLDA 374 Query 364 FAPAIP-DRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGG 422 F A DR++VVWLE E +LRVAPL+VA +L ++F T +LTSATL +GG Sbjct 375 FGHAEEVDRAEVVWLE--TGTERRPPLLRVAPLTVAGMLRDKLFGDRTVILTSATLALGG 432 Query 423 SFDAMATAWGLTAD------TPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQL 476 +FD +A WGL A + W GLDVGSPF H +SGILYVA HLP PGRDG A L Sbjct 433 AFDGLARQWGLGAKEGAKERSGWTGLDVGSPFDHPRSGILYVAKHLPQPGRDGLPEA-YL 491 Query 477 TEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAAT 536 EI ELI AAGGRTLGLFSSMRAA+AATEA+R+RLS P+LCQGDDST LV++F+ D T Sbjct 492 EEITELIEAAGGRTLGLFSSMRAAKAATEALRDRLSVPLLCQGDDSTMLLVKQFSEDEPT 551 Query 537 SLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHA 596 LFGTLSLWQGVDVPGPSL LV+IDRIPFPRPDDPL SARQR VAA+GGNGFM+VAA+HA Sbjct 552 CLFGTLSLWQGVDVPGPSLRLVIIDRIPFPRPDDPLSSARQRHVAAKGGNGFMSVAATHA 611 Query 597 ALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 ALLLAQG+GRLLR D+GVVAVLD R+ATARY FLR SLPPFW T + +VR ALRRL Sbjct 612 ALLLAQGAGRLLRSQHDKGVVAVLDPRLATARYAGFLRDSLPPFWPTNDPAKVREALRRL 671 Query 657 A 657 A Sbjct 672 A 672 >gi|19553718|ref|NP_601720.1| Rad3-related DNA helicase [Corynebacterium glutamicum ATCC 13032] Length=665 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/661 (58%), Positives = 462/661 (70%), Gaps = 18/661 (2%) Query 3 ESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVP 62 + ++ S ELL AV ALGG RR GQ+ MA AV AF+T HL VQAGTGTGKSLAYLVP Sbjct 13 DPLNASTEELLTAAVEALGGARRAGQEAMAKAVTKAFDTERHLAVQAGTGTGKSLAYLVP 72 Query 63 AIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLN 122 +I A D+ V+VSTATIALQRQLV+RDLP+LVD+L + RRP FA++KGR NYLC+N Sbjct 73 SIRHAQKSDSTVIVSTATIALQRQLVNRDLPRLVDALEPLMERRPTFAIMKGRSNYLCMN 132 Query 123 KIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSW 182 K+ + D QE+ ++ LG+ + RL WA+ T +GDRDDL PGV D +W Sbjct 133 KVARQEELNQEDALIEQED------ISWLGKHIVRLNEWANETETGDRDDLDPGVPDLAW 186 Query 183 SQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRL 242 QVSV+AREC+G +RCP G +CF+E ARG A ADVVVTNHALLAIDA+++ +VLPEH + Sbjct 187 KQVSVTARECIGASRCPHGEDCFAEIARGKAKEADVVVTNHALLAIDALSDVSVLPEHDV 246 Query 243 LVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDAR 302 +V+DEAHEL R+T+VA+AE+T +L +AARR ++L K +R+Q + + + + Sbjct 247 VVIDEAHELDGRITAVASAEITVNSLNLAARRASKLDSDKREERVQEIAGDLETLLQTMQ 306 Query 303 PGRIDCLDDEMATYLSALRDAASAARSAI------DTGSDTTTASVRAEAGAVLTEISDT 356 PGR + +D+ L AL+DA A R+ I + +D + R L EI D Sbjct 307 PGRWNDMDEGSKGTLVALKDALWALRAQIAGAPEGEAANDPERFAERQNLSNHLMEIHDA 366 Query 357 ASRILASFAPAIPDRS-DVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTS 415 RIL FA P + DVVW H+D + L VAPLSVA LL ++FA T VL S Sbjct 367 NVRILEVFAEEDPSKQYDVVWHNHDDRRGDS---LNVAPLSVAGLLHEKLFAENTVVLAS 423 Query 416 ATLTIGGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQ 475 ATLTIGG+F+AMA +WGL + W +D G+PF AKSGILY A HLP PGRDG E Sbjct 424 ATLTIGGNFNAMAASWGLPKGS-WDSMDAGTPFDPAKSGILYTARHLPDPGRDGL-PEET 481 Query 476 LTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAA 535 L EI ELITAAGGRTLGLFSS RAA AT+AMR RL VLCQGDD+T+ LV+KF+ Sbjct 482 LDEIYELITAAGGRTLGLFSSKRAAEQATKAMRLRLPFDVLCQGDDNTAALVKKFSDSEN 541 Query 536 TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASH 595 T LFGTL+LWQGVDVPG SLSLVLIDRIPFPRPDDPLL AR+ A A G NGFM VAA+H Sbjct 542 TCLFGTLTLWQGVDVPGRSLSLVLIDRIPFPRPDDPLLQARKEAADAEGRNGFMEVAATH 601 Query 596 AALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRR 655 AALL+AQG+GRLLR V DRGVVAVLD R++T RYG FLR S+P FW+TTN VRAAL+R Sbjct 602 AALLMAQGAGRLLRHVGDRGVVAVLDHRLSTKRYGGFLRFSMPRFWETTNPETVRAALKR 661 Query 656 L 656 L Sbjct 662 L 662 >gi|344043845|gb|EGV39532.1| Rad3-related DNA helicase [Corynebacterium glutamicum S9114] Length=665 Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/661 (57%), Positives = 463/661 (71%), Gaps = 18/661 (2%) Query 3 ESVSMSVPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVP 62 + ++ S ELL AV ALGG RR GQ+ MA AV AF++ HL VQAGTGTGKSLAYLVP Sbjct 13 DPLNASTEELLTAAVEALGGARRAGQEAMAKAVTKAFDSERHLAVQAGTGTGKSLAYLVP 72 Query 63 AIIRALCDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLN 122 +I A D+ V+VSTATIALQRQLV+RDLP+LVD+L + RRP FA++KGR NYLC+N Sbjct 73 SIRHAQKADSTVIVSTATIALQRQLVNRDLPRLVDALEPLMERRPTFAIMKGRSNYLCMN 132 Query 123 KIHNSVTASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSW 182 K+ + D QE+ ++ LG+ + RL WA+ T +GDRDDL PGV D +W Sbjct 133 KVARQEELNQEDALIEQED------ISWLGKHIVRLNEWANETETGDRDDLDPGVPDLAW 186 Query 183 SQVSVSARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRL 242 QVSV+AREC+G +RCP G +CF+E ARG A ADVVVTNHALLAIDA+++ +VLPEH + Sbjct 187 KQVSVTARECIGASRCPHGEDCFAEIARGKAKEADVVVTNHALLAIDALSDVSVLPEHDV 246 Query 243 LVVDEAHELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDAR 302 +V+DEAHEL R+T+VA+AE+T +L +AARR ++L K +R+Q + + + + Sbjct 247 VVIDEAHELDGRITAVASAEITVNSLNLAARRASKLDSDKREERVQEIAGDLETLLQTMQ 306 Query 303 PGRIDCLDDEMATYLSALRDAASAARSAI------DTGSDTTTASVRAEAGAVLTEISDT 356 PGR + +D+ L AL+DA A R+ I + +D + R L EI D Sbjct 307 PGRWNDMDEGSKGTLVALKDALWALRAQIAGAPEGEAANDPERFAERQNLSNHLMEIHDA 366 Query 357 ASRILASFAPAIPDRS-DVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTS 415 RIL FA P + DVVW H+D + L VAPLSVA LL ++FA T VL S Sbjct 367 IVRILEVFAEEDPSKQYDVVWHNHDDRRGDS---LNVAPLSVAGLLHEKLFAENTVVLAS 423 Query 416 ATLTIGGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQ 475 ATLTIGG+F+AMA +WGL + W +D G+PF AKSGILY A HLP PGRDG E Sbjct 424 ATLTIGGNFNAMAASWGLPKGS-WDSMDAGTPFDPAKSGILYTARHLPDPGRDGL-PEET 481 Query 476 LTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAA 535 L EI ELITAAGGRTLGLFSS RAA AT+AMR RL VLCQGDD+T+ LV+KF+ Sbjct 482 LDEIYELITAAGGRTLGLFSSKRAAEQATKAMRLRLPFDVLCQGDDNTAALVKKFSDSEN 541 Query 536 TSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASH 595 T LFGTL+LWQGVDVPG SLSLVLIDRIPFPRPDDPLL AR+ A A G NGFM VAA+H Sbjct 542 TCLFGTLTLWQGVDVPGRSLSLVLIDRIPFPRPDDPLLQARKEAADAEGRNGFMEVAATH 601 Query 596 AALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRR 655 AALL+AQG+GRLLR V DRGVVAVLD R++T RYG FLR+S+P FW+TTN VRAAL+R Sbjct 602 AALLMAQGAGRLLRHVGDRGVVAVLDHRLSTKRYGGFLRSSMPRFWETTNPETVRAALKR 661 Query 656 L 656 L Sbjct 662 L 662 >gi|340531198|gb|AEK46403.1| ATP-dependent DNA helicase DinG [Amycolatopsis mediterranei S699] Length=651 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/651 (60%), Positives = 462/651 (71%), Gaps = 31/651 (4%) Query 31 MAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDDAPVVVSTATIALQRQLVDR 90 MA AV A TGEHL VQAGTGTGKSLAYLVPAI A+ +A VVVSTATIALQRQLVDR Sbjct 1 MADAVGRAIRTGEHLAVQAGTGTGKSLAYLVPAIRHAVEKEATVVVSTATIALQRQLVDR 60 Query 91 DLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTASDHDDERPQEELFDPVAVTA 150 DLP+L +L L R P FA+LKGRRNY+CL+++ + DE +LFDP AV+ Sbjct 61 DLPRLAKALKKPLGREPTFAILKGRRNYMCLHRLDSGAP-----DEPEDAQLFDPFAVSR 115 Query 151 LGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSARECLGVARCPFGSECFSERAR 210 LG++V RL WAS T +GDRD+L PGV D++W QVSV+A+ECLG +RCP G++CF+E+AR Sbjct 116 LGKEVTRLREWASDTETGDRDELVPGVTDQAWRQVSVTAKECLGASRCPIGTDCFAEKAR 175 Query 211 GAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAHELADRVTSVAAAELTSATLGM 270 AG ADV+VTNHALLAIDA+ VLP+H ++++DEAH+L DRVTSVA ELTSA Sbjct 176 AEAGRADVIVTNHALLAIDALQGYQVLPDHDVVIIDEAHDLVDRVTSVATGELTSAMCAS 235 Query 271 AARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCLDDEMATYLSALRDAASAARSA 330 AARR +L+D V L A + I D GR+D L + + A+RDAA +A Sbjct 236 AARRCGKLIDADVADGLLEAGDGLALIIDDLPAGRMDELPRPLQGAIPAIRDAAHRCITA 295 Query 331 I--DTGSDTTTASVRAEAGAVLTEISDTASRILASFAPAIPDRSDVVWLEHEDNHESARA 388 + D D A+ R A ++L E+ DTA R+L +F + DVVWL + + R Sbjct 296 LGSDRKEDVEGATARKLARSLLDEVHDTAVRLLEAFDEDQAHQRDVVWLSGDKYSSNPRP 355 Query 389 -VLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMATAWGL-------------- 433 L+VAPL VA LL +VF + TT+LTSATLT+GG+FD MA WGL Sbjct 356 PALKVAPLGVAGLLRERVFNQHTTILTSATLTLGGTFDTMARQWGLPPGAARVEQAPGAA 415 Query 434 -TADTP-------WRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEIAELITA 485 + P W GLDVGSPF H ++GILY+A HLPPPGRDG S+ + E+AELI A Sbjct 416 TEKEAPSDDSGPKWTGLDVGSPFDHRRNGILYLAKHLPPPGRDGLTSS-TMDELAELIEA 474 Query 486 AGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLFGTLSLW 545 AGGRTLGLFSSMRAA+ ATE MRERL P+LCQGDD+TS LV+KF+ D T LFGTLSLW Sbjct 475 AGGRTLGLFSSMRAAKQATEEMRERLDFPILCQGDDATSLLVQKFSEDVRTCLFGTLSLW 534 Query 546 QGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALLLAQGSG 605 QGVDVPGPSL LV++DRIPFPRPDDP+ SARQRAV ARGGNGF+TVAA+HAALLLAQG+G Sbjct 535 QGVDVPGPSLQLVVVDRIPFPRPDDPVSSARQRAVEARGGNGFLTVAATHAALLLAQGTG 594 Query 606 RLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 RL R VTDRGVVAVLDSR+A ARYG FLRASLPPFW T + VR ALRRL Sbjct 595 RLHRSVTDRGVVAVLDSRLANARYGGFLRASLPPFWPTMDPKVVREALRRL 645 >gi|333921291|ref|YP_004494872.1| putative ATP-dependent DNA helicase DinG [Amycolicicoccus subflavus DQS3-9A1] gi|333483512|gb|AEF42072.1| putative ATP-dependent DNA helicase DinG [Amycolicicoccus subflavus DQS3-9A1] Length=681 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/676 (59%), Positives = 483/676 (72%), Gaps = 38/676 (5%) Query 12 LLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDD 71 LL AV ALGG R GQ M +AVAHA +TGEHL VQAGTGTGKSLAYLVP I A+ Sbjct 7 LLRRAVEALGGKERSGQLTMTSAVAHAIDTGEHLAVQAGTGTGKSLAYLVPGIAHAVQSG 66 Query 72 APVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTAS 131 + VVVSTATIALQ+QL+DRDLP+L ++L AL R P+FA+LKGR NYLCLNK+HN+ Sbjct 67 STVVVSTATIALQKQLIDRDLPRLAEALKPALGRAPEFAILKGRNNYLCLNKLHNT---P 123 Query 132 DHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSARE 191 + DE + LFDP A + LGRD++RL WA T SGDR+++ PGV D++W Q+SV++RE Sbjct 124 EDPDEGGGDGLFDPFAASRLGRDIRRLHEWAEETESGDREEVIPGVSDQAWRQISVTSRE 183 Query 192 CLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAHEL 251 CLGV+RCP G +CF+ERAR +A ADVVVTNHALLAI A++E+++LP+H ++++DEAHEL Sbjct 184 CLGVSRCPIGEQCFAERARVSASHADVVVTNHALLAIGALSEASILPDHDVVIIDEAHEL 243 Query 252 ADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCLDD 311 DRVT A AELTSA++ AAR+ RL++ + L A + + +A G + L Sbjct 244 VDRVTGAATAELTSASVIAAARKCVRLIEDAESDALHAVADDLDGLLENAPEGLWETLSP 303 Query 312 EMATYLSALRDAASAARSAID------TGSDTTTASVRAEAGAVLTEISDTASRILASFA 365 A LS LRDAA AR+AI ++ A+ R A A+L E+ DTA R+L ++ Sbjct 304 TAALVLSGLRDAAWTARTAIGPIRQGMATAEPEAAAARTNALALLDELHDTAVRVLEAYG 363 Query 366 PAIP-DRSDVVWLEHEDNHESARAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSF 424 P R DVVWL +D V+RVAPLSVA LL +++FA AT +LTSATL IGG+F Sbjct 364 EPDPARRRDVVWLNRDDRRGD---VVRVAPLSVAGLLRSRLFAEATVILTSATLAIGGTF 420 Query 425 DAMATAWGLT-----------------ADTP-------WRGLDVGSPFQHAKSGILYVAA 460 DA+A WGL +TP W LD GSPF H ++GILY A Sbjct 421 DALARNWGLPTQSGSSEPGPDPALASGKETPSDSSALRWTSLDAGSPFDHPRAGILYTAR 480 Query 461 HLPPPGRDGSGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGD 520 HLPPPGRDG A L EIA L+ A GGRTLGLFSSMRAARAA +A+++R+STP+LCQGD Sbjct 481 HLPPPGRDGLAPA-CLDEIAALVDAVGGRTLGLFSSMRAARAAADALQDRISTPILCQGD 539 Query 521 DSTSTLVEKFTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAV 580 +ST LV +F AD ATSLFGTLSLWQGVDVPGPSLSLV++DRIPFPRPDDPLL ARQRAV Sbjct 540 NSTGQLVRQFGADEATSLFGTLSLWQGVDVPGPSLSLVIVDRIPFPRPDDPLLRARQRAV 599 Query 581 AARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPF 640 A GGNGFMTVAASHAALLLAQG+GRLLR V D GVVA+LD R+ATARYG +LRASLPPF Sbjct 600 EASGGNGFMTVAASHAALLLAQGAGRLLRSVDDIGVVAILDPRLATARYGNYLRASLPPF 659 Query 641 WQTTNATQVRAALRRL 656 WQTT+ AL+R+ Sbjct 660 WQTTDRDVALGALQRI 675 >gi|296270176|ref|YP_003652808.1| helicase c2 [Thermobispora bispora DSM 43833] gi|296092963|gb|ADG88915.1| helicase c2 [Thermobispora bispora DSM 43833] Length=676 Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/657 (63%), Positives = 475/657 (73%), Gaps = 17/657 (2%) Query 9 VPELLAIAVAALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRAL 68 V ELLAIAV L G R GQ +MA AV A EHL VQAGTGTGKSLAYLVPAI A Sbjct 24 VEELLAIAVRGLRGVERPGQVKMAQAVWQAMSDAEHLAVQAGTGTGKSLAYLVPAIRYAA 83 Query 69 CDDAPVVVSTATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSV 128 PVVVSTATIALQRQLV+RDLP+L+D+L LP RP+FA+LKGRRNYLC +K+ + Sbjct 84 ETGRPVVVSTATIALQRQLVERDLPRLIDALAPHLPHRPEFAILKGRRNYLCRHKMSTGL 143 Query 129 TASDHDDERPQEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVS 188 DDE +E LFD V+A GR VQR+ WA+ T +GDRD+L PGV D +W Q SVS Sbjct 144 A----DDE--EERLFDVAEVSATGRMVQRIQEWANETETGDRDELVPGVSDLAWRQFSVS 197 Query 189 ARECLGVARCPFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEA 248 RECLG RCP G+ECF+E A+ A AD+VVTNHALLAIDA+ + +LPEH ++VVDEA Sbjct 198 GRECLGAQRCPNGAECFAELAKERASHADIVVTNHALLAIDAMEDLPLLPEHDVVVVDEA 257 Query 249 HELADRVTSVAAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDC 308 HEL DRVTSV EL+ +T+ +AARR RLV P V +RL+ A + ++ + A PGRID Sbjct 258 HELTDRVTSVVTGELSESTVALAARRAERLVGPDVAERLKEAGESLAALLAAAPPGRIDR 317 Query 309 LDDEMATYLSALRDAASAARSAID--TGSDTTTASVRAEAGAVLTEISDTASRILASFAP 366 L + +A L+ +RDAASA +A+ D A+ R A L EI DTA R+L +F Sbjct 318 LPESLALTLALVRDAASACVTALGPRNADDPENAAARRAAFTALDEIHDTAQRMLDAFGD 377 Query 367 ----AIPD--RSDVVWLEHEDNH-ESARAVLRVAPLSVAELLATQVFARATTVLTSATLT 419 +P+ RS+VVWL+ H LRVAPLSV +L ++F R T +LTSATL Sbjct 378 PEQGGLPEAQRSEVVWLDPPGLHGRRTPPALRVAPLSVGGMLRERLFGRRTVILTSATLV 437 Query 420 IGGSFDAMATAWGLTADTPWRGLDVGSPFQHAKSGILYVAAHLPPPGRDGSGSAEQLTEI 479 +GGSFD +A WGL + W GLDVGSPF HA+ GILYVA HLP PGRDG A LTEI Sbjct 438 LGGSFDGLARQWGLR-EGEWTGLDVGSPFDHARQGILYVAKHLPQPGRDGLPEA-YLTEI 495 Query 480 AELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEKFTADAATSLF 539 AELI AAGGRTLGLFSSMRAARAA EA+RERL PVLCQGDD+T LV++F AD AT LF Sbjct 496 AELIEAAGGRTLGLFSSMRAARAAAEALRERLDVPVLCQGDDTTGQLVKRFAADPATCLF 555 Query 540 GTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFMTVAASHAALL 599 GTLSLWQGVDVPGPSLSLV+IDRIPFPRPDDPL SARQR VAA GGNGFM VAA+HAALL Sbjct 556 GTLSLWQGVDVPGPSLSLVIIDRIPFPRPDDPLASARQRHVAATGGNGFMAVAATHAALL 615 Query 600 LAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQVRAALRRL 656 LAQG+GRLLR DRGVVAVLD R+ATARY FL SLPPFW+TT+ VR ALRRL Sbjct 616 LAQGAGRLLRSPDDRGVVAVLDPRLATARYSGFLLGSLPPFWRTTDPRVVRDALRRL 672 >gi|54023050|ref|YP_117292.1| putative ATP-dependent helicase [Nocardia farcinica IFM 10152] gi|54014558|dbj|BAD55928.1| putative ATP-dependent helicase [Nocardia farcinica IFM 10152] Length=670 Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/673 (61%), Positives = 484/673 (72%), Gaps = 35/673 (5%) Query 19 ALGGTRRRGQQEMAAAVAHAFETGEHLVVQAGTGTGKSLAYLVPAIIRALCDDAPVVVST 78 ALGG R GQ MAAAV HA +T +HL VQAGTGTGKSLAYLVP++ A+ VVVST Sbjct 3 ALGGKERPGQVRMAAAVDHAIDTKQHLAVQAGTGTGKSLAYLVPSLRHAVRTGRTVVVST 62 Query 79 ATIALQRQLVDRDLPQLVDSLTNALPRRPKFALLKGRRNYLCLNKIHNSVTASDHDDERP 138 ATIALQRQLVDRDLP+L +L L R P+FA+LKGR NYLCLNKI+++V DE Sbjct 63 ATIALQRQLVDRDLPRLAQALAGPLGRPPRFAILKGRNNYLCLNKINSAVP-----DEPA 117 Query 139 QEELFDPVAVTALGRDVQRLTAWASTTVSGDRDDLKPGVGDRSWSQVSVSARECLGVARC 198 + ELFD A++ LGR+VQRL WAS T +GDRD+L PGV DR+W QVSVS+RECLG +RC Sbjct 118 EAELFDAFAISRLGREVQRLNEWASDTETGDRDELAPGVSDRAWRQVSVSSRECLGKSRC 177 Query 199 PFGSECFSERARGAAGLADVVVTNHALLAIDAVAESAVLPEHRLLVVDEAHELADRVTSV 258 PFG +C++ERARG + ADVVVTNHALLAIDA++ VLPEH ++V+DEAHEL DRVT V Sbjct 178 PFGQDCYAERARGESAQADVVVTNHALLAIDAISGIQVLPEHDVVVIDEAHELVDRVTGV 237 Query 259 AAAELTSATLGMAARRITRLVDPKVTQRLQAASATFSSAIHDARPGRIDCLDDEMATYLS 318 A AEL++A++ AARR +L+D + RL+ A+ + + + P R D L + A L+ Sbjct 238 ATAELSAASISAAARRCAKLIDEREVDRLEGAAEAWHEILDNLPPARWDRLPEGAAQVLA 297 Query 319 ALRDAASAARSAIDT-GS-----DTTTASVRAEAGAVLTEISDTASRILASFAPAIPD-R 371 +RD+A AR+ + GS D TA+ R A A + E+ D+A R L +F P R Sbjct 298 LIRDSAWNARTELSPPGSSTAQGDPDTAAARNFAVAAVEEVHDSAVRALTAFDEPDPAAR 357 Query 372 SDVVWLEHEDNHESA-RAVLRVAPLSVAELLATQVFARATTVLTSATLTIGGSFDAMATA 430 DV+WL E++ R +R+APLSV LL ++F AT VLTSATL IGGSFD +A Sbjct 358 RDVIWLAAEESRGGVPRKTVRMAPLSVGGLLRARLFGAATVVLTSATLQIGGSFDNLAVT 417 Query 431 WGLTADTP---------------------WRGLDVGSPFQHAKSGILYVAAHLPPPGRDG 469 WGL A + W LDVGSPF HAKSGILYVA HLPPPGRDG Sbjct 418 WGLPAQSGDRVDPATANGGRAPSDTESIRWSSLDVGSPFDHAKSGILYVAKHLPPPGRDG 477 Query 470 SGSAEQLTEIAELITAAGGRTLGLFSSMRAARAATEAMRERLSTPVLCQGDDSTSTLVEK 529 A L EI LI AAGGRTLGLFSSMRAARAA +AMR+RLSTPVLCQG+D+T LV K Sbjct 478 LPPA-YLDEIERLIDAAGGRTLGLFSSMRAARAAADAMRDRLSTPVLCQGEDATGALVGK 536 Query 530 FTADAATSLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLSARQRAVAARGGNGFM 589 F D TSLFGTLSLWQGVDVPGPSLSLV++DRIPFPRPDDPLL+ARQRAV +RGGNGF+ Sbjct 537 FADDPETSLFGTLSLWQGVDVPGPSLSLVILDRIPFPRPDDPLLAARQRAVESRGGNGFL 596 Query 590 TVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATARYGEFLRASLPPFWQTTNATQV 649 TVAA+HAALLLAQG+GRLLR V DRGV+AVLDSR+ATARYG +LRA+LPP+W+TT+ V Sbjct 597 TVAANHAALLLAQGTGRLLRSVDDRGVIAVLDSRLATARYGGYLRATLPPYWETTDPDVV 656 Query 650 RAALRRLARADAK 662 ALRRL AK Sbjct 657 AKALRRLTADAAK 669 Lambda K H 0.318 0.130 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1552108761280 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40