BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1342c Length=120 Score E Sequences producing significant alignments: (Bits) Value gi|15840797|ref|NP_335834.1| hypothetical protein MT1383 [Mycoba... 239 9e-62 gi|340626358|ref|YP_004744810.1| hypothetical protein MCAN_13601... 238 2e-61 gi|183984010|ref|YP_001852301.1| hypothetical protein MMAR_4039 ... 203 5e-51 gi|118619115|ref|YP_907447.1| hypothetical protein MUL_3905 [Myc... 202 1e-50 gi|333989986|ref|YP_004522600.1| hypothetical protein JDM601_134... 183 6e-45 gi|118470375|ref|YP_889154.1| Pks14 protein [Mycobacterium smegm... 169 9e-41 gi|254819172|ref|ZP_05224173.1| hypothetical protein MintA_04559... 169 1e-40 gi|41408517|ref|NP_961353.1| Pks14 [Mycobacterium avium subsp. p... 166 9e-40 gi|342858001|ref|ZP_08714657.1| hypothetical protein MCOL_03965 ... 166 1e-39 gi|15827595|ref|NP_301858.1| hypothetical protein ML1176 [Mycoba... 162 1e-38 gi|120405238|ref|YP_955067.1| hypothetical protein Mvan_4284 [My... 159 9e-38 gi|145222949|ref|YP_001133627.1| hypothetical protein Mflv_2362 ... 158 2e-37 gi|254774379|ref|ZP_05215895.1| hypothetical protein MaviaA2_068... 158 2e-37 gi|240170901|ref|ZP_04749560.1| hypothetical protein MkanA1_1643... 158 3e-37 gi|108800805|ref|YP_641002.1| hypothetical protein Mmcs_3841 [My... 157 4e-37 gi|296170284|ref|ZP_06851875.1| Pks14 family protein [Mycobacter... 155 1e-36 gi|169628578|ref|YP_001702227.1| hypothetical protein MAB_1487c ... 148 3e-34 gi|226360553|ref|YP_002778331.1| hypothetical protein ROP_11390 ... 136 8e-31 gi|312139210|ref|YP_004006546.1| integral membrane protein [Rhod... 136 1e-30 gi|325673484|ref|ZP_08153175.1| Pks14 protein [Rhodococcus equi ... 136 1e-30 gi|111018435|ref|YP_701407.1| hypothetical protein RHA1_ro01431 ... 135 2e-30 gi|54023064|ref|YP_117306.1| hypothetical protein nfa10970 [Noca... 117 4e-25 gi|262201913|ref|YP_003273121.1| hypothetical protein Gbro_1974 ... 103 6e-21 gi|343924694|ref|ZP_08764236.1| hypothetical protein GOALK_023_0... 100 5e-20 gi|226307364|ref|YP_002767324.1| hypothetical protein RER_38770 ... 95.5 2e-18 gi|333921279|ref|YP_004494860.1| hypothetical protein AS9A_3622 ... 94.0 7e-18 gi|25028955|ref|NP_739009.1| hypothetical protein CE2399 [Coryne... 91.7 4e-17 gi|326385025|ref|ZP_08206697.1| hypothetical protein SCNU_18878 ... 90.9 5e-17 gi|300780586|ref|ZP_07090441.1| conserved hypothetical protein [... 90.1 1e-16 gi|319949717|ref|ZP_08023746.1| hypothetical protein ES5_09605 [... 89.7 1e-16 gi|296139026|ref|YP_003646269.1| hypothetical protein Tpau_1301 ... 88.6 3e-16 gi|237785976|ref|YP_002906681.1| hypothetical protein ckrop_1398... 87.4 6e-16 gi|19553699|ref|NP_601701.1| hypothetical protein NCgl2413 [Cory... 85.1 3e-15 gi|334336267|ref|YP_004541419.1| hypothetical protein Isova_0739... 84.0 6e-15 gi|317508773|ref|ZP_07966423.1| serine/threonine-protein kinase ... 83.6 1e-14 gi|296393946|ref|YP_003658830.1| hypothetical protein Srot_1536 ... 81.3 4e-14 gi|227488226|ref|ZP_03918542.1| conserved hypothetical protein [... 80.5 8e-14 gi|172041143|ref|YP_001800857.1| hypothetical protein cur_1463 [... 79.0 2e-13 gi|340793700|ref|YP_004759163.1| hypothetical protein CVAR_0738 ... 77.4 7e-13 gi|336120976|ref|YP_004575763.1| hypothetical protein MLP_53460 ... 77.0 9e-13 gi|260579677|ref|ZP_05847540.1| membrane protein [Corynebacteriu... 76.6 1e-12 gi|302554226|ref|ZP_07306568.1| conserved hypothetical protein [... 76.6 1e-12 gi|329939877|ref|ZP_08289178.1| putative membrane protein [Strep... 76.6 1e-12 gi|29829375|ref|NP_824009.1| hypothetical protein SAV_2833 [Stre... 76.3 1e-12 gi|225021581|ref|ZP_03710773.1| hypothetical protein CORMATOL_01... 75.9 2e-12 gi|68535571|ref|YP_250276.1| hypothetical protein jk0501 [Coryne... 75.9 2e-12 gi|302525619|ref|ZP_07277961.1| conserved hypothetical protein [... 75.9 2e-12 gi|21223774|ref|NP_629553.1| hypothetical protein SCO5414 [Strep... 75.5 2e-12 gi|297157150|gb|ADI06862.1| hypothetical protein SBI_03741 [Stre... 75.5 3e-12 gi|302542442|ref|ZP_07294784.1| Pks14 protein [Streptomyces hygr... 75.5 3e-12 >gi|15840797|ref|NP_335834.1| hypothetical protein MT1383 [Mycobacterium tuberculosis CDC1551] gi|31792538|ref|NP_855031.1| hypothetical protein Mb1377c [Mycobacterium bovis AF2122/97] gi|57116851|ref|YP_177800.1| hypothetical protein Rv1342c [Mycobacterium tuberculosis H37Rv] 78 more sequence titles Length=120 Score = 239 bits (610), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW Sbjct 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL Sbjct 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 >gi|340626358|ref|YP_004744810.1| hypothetical protein MCAN_13601 [Mycobacterium canettii CIPT 140010059] gi|340004548|emb|CCC43692.1| conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=120 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 119/120 (99%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW Sbjct 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 IG+VHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL Sbjct 61 IGMVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 >gi|183984010|ref|YP_001852301.1| hypothetical protein MMAR_4039 [Mycobacterium marinum M] gi|183177336|gb|ACC42446.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=120 Score = 203 bits (517), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 96/120 (80%), Positives = 105/120 (88%), Gaps = 0/120 (0%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MT PETP AQ VE+IR+AL+GYRIMAWTTG+WLIALCYEIVVRYVVKVDNPPTW Sbjct 1 MTTPETPEAQQTTTTFPVEKIRSALVGYRIMAWTTGIWLIALCYEIVVRYVVKVDNPPTW 60 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 IGVVHGWVYF YLL T NLAVKVRWP+GKT GVLL+GTIPLLGI+VEHFQTK+IK RF + Sbjct 61 IGVVHGWVYFAYLLFTANLAVKVRWPIGKTVGVLLSGTIPLLGIIVEHFQTKDIKTRFAV 120 >gi|118619115|ref|YP_907447.1| hypothetical protein MUL_3905 [Mycobacterium ulcerans Agy99] gi|118571225|gb|ABL05976.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=120 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 96/120 (80%), Positives = 105/120 (88%), Gaps = 0/120 (0%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MT PETP AQ VE+IR+AL+GYRIMAWTTG+WLIALCYEIVVRYVVKVDNPPTW Sbjct 1 MTPPETPEAQQTTTTFPVEKIRSALVGYRIMAWTTGVWLIALCYEIVVRYVVKVDNPPTW 60 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 IGVVHGWVYF YLL T NLAVKVRWP+GKT GVLL+GTIPLLGI+VEHFQTK+IK RF + Sbjct 61 IGVVHGWVYFAYLLFTANLAVKVRWPIGKTVGVLLSGTIPLLGIIVEHFQTKDIKTRFAV 120 >gi|333989986|ref|YP_004522600.1| hypothetical protein JDM601_1346 [Mycobacterium sp. JDM601] gi|333485954|gb|AEF35346.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=113 Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 92/116 (80%), Positives = 101/116 (88%), Gaps = 5/116 (4%) Query 5 ETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGVV 64 ETPA A PA E+IR+ALL YR++AW TG+WLIALCYEIVVRYVVKVDNPPTWIGVV Sbjct 3 ETPA--QAAPA---EKIRSALLPYRVLAWATGVWLIALCYEIVVRYVVKVDNPPTWIGVV 57 Query 65 HGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 HGWVYF YLL T NLAVKVRWPLGKT GVLLAGTIPLLGI+VEHFQ++ IKA+F L Sbjct 58 HGWVYFAYLLATFNLAVKVRWPLGKTIGVLLAGTIPLLGIIVEHFQSRNIKAQFNL 113 >gi|118470375|ref|YP_889154.1| Pks14 protein [Mycobacterium smegmatis str. MC2 155] gi|118171662|gb|ABK72558.1| Pks14 protein [Mycobacterium smegmatis str. MC2 155] Length=114 Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 79/114 (70%), Positives = 95/114 (84%), Gaps = 3/114 (2%) Query 7 PAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGVVHG 66 PAA+ + P E IR AL+GYRI AW TGLWLIALCYE+V++Y+V+VDNPP WIG+VHG Sbjct 4 PAAEVSTPR---ETIRKALVGYRIFAWATGLWLIALCYEMVLKYIVQVDNPPGWIGIVHG 60 Query 67 WVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 WVYF YL+ T NLAVK+RWP+GKT GVLLAGTIP LGI+VEHF T+++K RF L Sbjct 61 WVYFIYLMFTANLAVKIRWPIGKTIGVLLAGTIPFLGIIVEHFNTRDVKKRFEL 114 >gi|254819172|ref|ZP_05224173.1| hypothetical protein MintA_04559 [Mycobacterium intracellulare ATCC 13950] Length=116 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/120 (71%), Positives = 98/120 (82%), Gaps = 4/120 (3%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MT PETP A PA+ V++IRTALLGYRIMAWTTGLWLIALCYEIV + D+ W Sbjct 1 MTTPETPGG--AVPAVPVDKIRTALLGYRIMAWTTGLWLIALCYEIVSH--LAFDHEIRW 56 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 I VVHGWVYF Y+L NLA+KVRWP+GKT GVLL+GTIPLLGI+VEHFQT+++KARFGL Sbjct 57 IEVVHGWVYFIYVLTAFNLAIKVRWPIGKTVGVLLSGTIPLLGIIVEHFQTRDVKARFGL 116 >gi|41408517|ref|NP_961353.1| Pks14 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465408|ref|YP_880794.1| hypothetical protein MAV_1559 [Mycobacterium avium 104] gi|41396873|gb|AAS04736.1| Pks14 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166695|gb|ABK67592.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336460954|gb|EGO39835.1| integral membrane protein [Mycobacterium avium subsp. paratuberculosis S397] Length=116 Score = 166 bits (420), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 85/120 (71%), Positives = 98/120 (82%), Gaps = 4/120 (3%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MT PETP A PA+ V++IRTALLGYRIMAWTTGLWLIALCYEIV V+ + W Sbjct 1 MTTPETPGA--PVPAVPVDKIRTALLGYRIMAWTTGLWLIALCYEIVSHLVMH--HEIRW 56 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 I VVHGWVYF Y+L NLAVKVRWP+GKT GVLL+GTIPLLGI+VEHFQT+++KARFG+ Sbjct 57 IEVVHGWVYFVYVLTAFNLAVKVRWPIGKTIGVLLSGTIPLLGIIVEHFQTRDVKARFGV 116 >gi|342858001|ref|ZP_08714657.1| hypothetical protein MCOL_03965 [Mycobacterium colombiense CECT 3035] gi|342135334|gb|EGT88500.1| hypothetical protein MCOL_03965 [Mycobacterium colombiense CECT 3035] Length=116 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/120 (70%), Positives = 97/120 (81%), Gaps = 4/120 (3%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MT PETP + PA+ V++IRTALLGYRIMAWTTGLWLIALCYEIV + + W Sbjct 1 MTTPETPGT--SVPAVPVDKIRTALLGYRIMAWTTGLWLIALCYEIVSH--LAFGHEIRW 56 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 I VVHGWVYF Y+L NLAVKVRWPLGKT GVLL+GTIPLLGI+VEHFQ++++KARFGL Sbjct 57 IEVVHGWVYFIYVLTAFNLAVKVRWPLGKTVGVLLSGTIPLLGIIVEHFQSRDVKARFGL 116 >gi|15827595|ref|NP_301858.1| hypothetical protein ML1176 [Mycobacterium leprae TN] gi|221230072|ref|YP_002503488.1| hypothetical protein MLBr_01176 [Mycobacterium leprae Br4923] gi|1723045|sp|P54133.1|Y1176_MYCLE RecName: Full=Uncharacterized protein ML1176 gi|466926|gb|AAA50901.1| B1549_F2_59 [Mycobacterium leprae] gi|4493783|emb|CAB39142.1| putative membrane protein [Mycobacterium leprae] gi|13093146|emb|CAC31557.1| possible conserved membrane protein [Mycobacterium leprae] gi|219933179|emb|CAR71271.1| possible conserved membrane protein [Mycobacterium leprae Br4923] Length=119 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 82/120 (69%), Positives = 92/120 (77%), Gaps = 6/120 (5%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MT PETP A P E+ RTALLGYRIMAWTTG+WLIALCYEIV V + W Sbjct 1 MTRPETPQA----PDFDFEKSRTALLGYRIMAWTTGIWLIALCYEIVSHLVFH--HEIRW 54 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 I VVHGWVYF Y+L NLA+KVRWP+GKT GVLLAGT+PLLGI+VEHFQTK++K RFGL Sbjct 55 IEVVHGWVYFVYVLTAFNLAIKVRWPIGKTVGVLLAGTVPLLGIIVEHFQTKDVKTRFGL 114 >gi|120405238|ref|YP_955067.1| hypothetical protein Mvan_4284 [Mycobacterium vanbaalenii PYR-1] gi|119958056|gb|ABM15061.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=114 Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 78/120 (65%), Positives = 94/120 (79%), Gaps = 6/120 (5%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MTAP++PA P VE IR AL GYR++AW TG+WLIALCYE+V++Y + D+ W Sbjct 1 MTAPQSPA-----PITPVETIRKALTGYRVLAWATGIWLIALCYEMVMKYAFQ-DDSLGW 54 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 I VVHGWVYF YLL T NLAVKVRWP+ KT G+LLAGTIPL+GI+VEHFQT+ IK +FGL Sbjct 55 IAVVHGWVYFVYLLFTANLAVKVRWPIAKTVGILLAGTIPLVGIIVEHFQTQNIKEQFGL 114 >gi|145222949|ref|YP_001133627.1| hypothetical protein Mflv_2362 [Mycobacterium gilvum PYR-GCK] gi|315443411|ref|YP_004076290.1| hypothetical protein Mspyr1_17930 [Mycobacterium sp. Spyr1] gi|145215435|gb|ABP44839.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315261714|gb|ADT98455.1| hypothetical protein Mspyr1_17930 [Mycobacterium sp. Spyr1] Length=114 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 77/120 (65%), Positives = 94/120 (79%), Gaps = 6/120 (5%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MTAP++P+ P VE IR AL GYR++AW TGLWLIALCYE+V++Y D+ W Sbjct 1 MTAPQSPS-----PLTPVESIRKALTGYRVLAWATGLWLIALCYEMVMKYGFN-DDSLGW 54 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 I VVHGWVYF YLL T NLAVKVRWP+ KT GVLLAGT+PL+G++VEHFQT+ IKA+FG+ Sbjct 55 IAVVHGWVYFVYLLFTANLAVKVRWPIAKTVGVLLAGTVPLVGLIVEHFQTQNIKAQFGI 114 >gi|254774379|ref|ZP_05215895.1| hypothetical protein MaviaA2_06880 [Mycobacterium avium subsp. avium ATCC 25291] Length=106 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 78/107 (73%), Positives = 91/107 (86%), Gaps = 2/107 (1%) Query 14 PAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGVVHGWVYFTYL 73 PA+ V++IRTALLGYRIMAWTTGLWLIALCYEIV V+ + WI VVHGWVYF Y+ Sbjct 2 PAVPVDKIRTALLGYRIMAWTTGLWLIALCYEIVSHLVM--HHEIRWIEVVHGWVYFVYV 59 Query 74 LLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 L NLAVKVRWP+GKT GVLL+GTIPLLGI+VEHFQT+++KARFG+ Sbjct 60 LTAFNLAVKVRWPIGKTIGVLLSGTIPLLGIIVEHFQTRDVKARFGV 106 >gi|240170901|ref|ZP_04749560.1| hypothetical protein MkanA1_16437 [Mycobacterium kansasii ATCC 12478] Length=117 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 77/120 (65%), Positives = 93/120 (78%), Gaps = 3/120 (2%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MT PETP Q + E+IRTALLGYR+MAWTTG+WLIALCYE++ V + W Sbjct 1 MTTPETPETQRST-IFPAEKIRTALLGYRVMAWTTGIWLIALCYELISHLVF--HHEIRW 57 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 I +VHGWVYF Y+L NLAVKVRWP+GKT GVLLAGTIPLLGI+VEHFQT+++K+R+ L Sbjct 58 IEIVHGWVYFVYVLAAFNLAVKVRWPIGKTVGVLLAGTIPLLGIIVEHFQTRDVKSRYNL 117 >gi|108800805|ref|YP_641002.1| hypothetical protein Mmcs_3841 [Mycobacterium sp. MCS] gi|119869945|ref|YP_939897.1| hypothetical protein Mkms_3915 [Mycobacterium sp. KMS] gi|126436403|ref|YP_001072094.1| hypothetical protein Mjls_3827 [Mycobacterium sp. JLS] gi|108771224|gb|ABG09946.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696034|gb|ABL93107.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236203|gb|ABN99603.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=119 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 79/121 (66%), Positives = 95/121 (79%), Gaps = 3/121 (2%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MTAPETP A +++E I A+ YRI+AW TG+WLI LC E+V++Y+VKVD P W Sbjct 1 MTAPETPTT--APAGVSIETIAKAVRNYRILAWATGIWLIVLCAEMVLKYIVKVDWPFLW 58 Query 61 -IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFG 119 + +HGWVYF YLL T NLAVKVRWP+GKT GVLLAGTIPLLGI+VEH+QTK +KARFG Sbjct 59 LVAPIHGWVYFAYLLFTANLAVKVRWPIGKTIGVLLAGTIPLLGIIVEHYQTKNLKARFG 118 Query 120 L 120 L Sbjct 119 L 119 >gi|296170284|ref|ZP_06851875.1| Pks14 family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895007|gb|EFG74726.1| Pks14 family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=113 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 81/120 (68%), Positives = 92/120 (77%), Gaps = 7/120 (5%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MT PE A+ A VE+IRTALLGYR+MAW TGLWLIALCYEI V+ + W Sbjct 1 MTTPEKSAS-----AFPVEKIRTALLGYRVMAWATGLWLIALCYEIFSHLVL--HHEIRW 53 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 I VVHGWVYF Y+L NLAVKVRWP+ KT GVLLAGTIPLLGI+VEHFQT+++KARFGL Sbjct 54 IEVVHGWVYFVYVLTAFNLAVKVRWPIPKTIGVLLAGTIPLLGIIVEHFQTRDVKARFGL 113 >gi|169628578|ref|YP_001702227.1| hypothetical protein MAB_1487c [Mycobacterium abscessus ATCC 19977] gi|169240545|emb|CAM61573.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=120 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 69/120 (58%), Positives = 92/120 (77%), Gaps = 0/120 (0%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW 60 MT ET V +IR+AL YRI+AWTTG+WLIALC+E+ ++YV +V +PP+W Sbjct 1 MTENETTPDSTVVVTTPVAKIRSALWRYRILAWTTGVWLIALCWEMWLKYVEQVPHPPSW 60 Query 61 IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 IG+VHGW+YF YL+ T +LAVKVRWP +T G LLAGTIPLLG +VEH++TK++K +FG+ Sbjct 61 IGIVHGWIYFVYLIFTTDLAVKVRWPWPRTIGTLLAGTIPLLGFIVEHYRTKQVKEQFGI 120 >gi|226360553|ref|YP_002778331.1| hypothetical protein ROP_11390 [Rhodococcus opacus B4] gi|226239038|dbj|BAH49386.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=121 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 67/117 (58%), Positives = 85/117 (73%), Gaps = 1/117 (0%) Query 4 PETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGV 63 ET A + A ++I ALL YR++A+ TG+WL+ L E+V +Y+ KVDN PTWI V Sbjct 6 DETTAGSVTDTA-KQKKIAPALLRYRVLAYATGVWLLVLTAEMVAKYIFKVDNLPTWIAV 64 Query 64 VHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 VHGWVYF YLL+TL+LAVKVRWP G+T G LLAGTIP L VEH +TK+++ FGL Sbjct 65 VHGWVYFVYLLVTLDLAVKVRWPAGRTVGTLLAGTIPFLSFYVEHQRTKQVRRDFGL 121 >gi|312139210|ref|YP_004006546.1| integral membrane protein [Rhodococcus equi 103S] gi|311888549|emb|CBH47861.1| putative integral membrane protein [Rhodococcus equi 103S] Length=126 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 63/119 (53%), Positives = 86/119 (73%), Gaps = 0/119 (0%) Query 2 TAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWI 61 T P+ A A ++I +ALL YR++A+ TG+WL+ L E+V +Y+ VDN PTWI Sbjct 8 TTPQQTATAAAPTPQDNKKIASALLRYRVLAYATGIWLLVLTAEMVAKYIFSVDNLPTWI 67 Query 62 GVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 +VHGWVYF YL+LT++LAVKVRWP G+T G LLAGTIP L VEH++T+++K FG+ Sbjct 68 AIVHGWVYFVYLILTIDLAVKVRWPAGRTIGTLLAGTIPFLSFFVEHWRTQQVKKDFGV 126 >gi|325673484|ref|ZP_08153175.1| Pks14 protein [Rhodococcus equi ATCC 33707] gi|325555505|gb|EGD25176.1| Pks14 protein [Rhodococcus equi ATCC 33707] Length=126 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 63/119 (53%), Positives = 86/119 (73%), Gaps = 0/119 (0%) Query 2 TAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWI 61 T P+ A A ++I +ALL YR++A+ TG+WL+ L E+V +Y+ VDN PTWI Sbjct 8 TTPQQTATAAAPTPQDNKKIASALLRYRVLAYATGIWLLVLTAEMVAKYIFSVDNLPTWI 67 Query 62 GVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 +VHGWVYF YL+LT++LAVKVRWP G+T G LLAGTIP L VEH++T+++K FG+ Sbjct 68 AIVHGWVYFVYLILTIDLAVKVRWPAGRTIGTLLAGTIPFLSFFVEHWRTQQVKRDFGV 126 >gi|111018435|ref|YP_701407.1| hypothetical protein RHA1_ro01431 [Rhodococcus jostii RHA1] gi|110817965|gb|ABG93249.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=121 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/117 (57%), Positives = 85/117 (73%), Gaps = 1/117 (0%) Query 4 PETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGV 63 ET A + A ++I ALL YR++A+ TG+WL+ L E+V +Y+ KVDN P+WI V Sbjct 6 DETTAGSVTDTA-KQKKIAPALLRYRVLAYATGVWLLVLTAEMVAKYIFKVDNLPSWIAV 64 Query 64 VHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 VHGWVYF YLL+TL+LAVKVRWP G+T G LLAGTIP L VEH +TK+++ FGL Sbjct 65 VHGWVYFVYLLVTLDLAVKVRWPAGRTVGTLLAGTIPFLSFYVEHQRTKQVRRDFGL 121 >gi|54023064|ref|YP_117306.1| hypothetical protein nfa10970 [Nocardia farcinica IFM 10152] gi|54014572|dbj|BAD55942.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=127 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 58/101 (58%), Positives = 77/101 (77%), Gaps = 1/101 (0%) Query 20 RIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGVVHGWVYFTYLLLTLNL 79 +I++ALL YR++AW TGLWL+ L E++ +Y D PP+WI +VHGWVYF YL+LT +L Sbjct 28 KIKSALLRYRVLAWFTGLWLLLLTGEMIAKYGFDAD-PPSWIAIVHGWVYFVYLILTADL 86 Query 80 AVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 A+KVRWPLG+T G LLAGT+PLL VEH K++K FG+ Sbjct 87 ALKVRWPLGRTVGTLLAGTVPLLSFFVEHANAKQVKRDFGV 127 >gi|262201913|ref|YP_003273121.1| hypothetical protein Gbro_1974 [Gordonia bronchialis DSM 43247] gi|262085260|gb|ACY21228.1| hypothetical protein Gbro_1974 [Gordonia bronchialis DSM 43247] Length=116 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 55/115 (48%), Positives = 80/115 (70%), Gaps = 1/115 (0%) Query 6 TPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGVVH 65 T A+ AE VE++++ALL YR++AW TGLWL+ L E++++Y D+ ++ +VH Sbjct 2 TETAEPAEVTTPVEKVQSALLRYRVLAWITGLWLLLLVAELIMKYGFGNDSL-DFVPIVH 60 Query 66 GWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 GWVYF YL+ ++L++KVRWPLGK +AGTIP L VEH +TKE+K +F L Sbjct 61 GWVYFVYLICAIDLSIKVRWPLGKIIVTAIAGTIPFLSFWVEHIRTKEVKTQFNL 115 >gi|343924694|ref|ZP_08764236.1| hypothetical protein GOALK_023_00040 [Gordonia alkanivorans NBRC 16433] gi|343765374|dbj|GAA11162.1| hypothetical protein GOALK_023_00040 [Gordonia alkanivorans NBRC 16433] Length=116 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 54/114 (48%), Positives = 78/114 (69%), Gaps = 3/114 (2%) Query 8 AAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPP-TWIGVVHG 66 A+ + P VE++R ALL YR++AW TG+WL+ L E+++ Y DN ++ +VHG Sbjct 5 ASTASAPTAPVEKVRGALLRYRVLAWITGIWLLLLVAELILAY--GFDNKALDFVPIVHG 62 Query 67 WVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 WVYF YL++ ++LA+KVRWP GKT +AGTIP L EH +T+E+KA+F L Sbjct 63 WVYFVYLIMAVDLAIKVRWPAGKTIITAIAGTIPFLSFWFEHKRTQEVKAQFNL 116 >gi|226307364|ref|YP_002767324.1| hypothetical protein RER_38770 [Rhodococcus erythropolis PR4] gi|229494010|ref|ZP_04387779.1| Pks14 protein [Rhodococcus erythropolis SK121] gi|226186481|dbj|BAH34585.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] gi|229319079|gb|EEN84931.1| Pks14 protein [Rhodococcus erythropolis SK121] Length=126 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/121 (43%), Positives = 75/121 (62%), Gaps = 10/121 (8%) Query 9 AQHAEPAIAVER---IRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNP---PTW-- 60 A A PA+ E+ + +AL+ YR++AW TGLWL+ L E+V +Y++ +DN P+W Sbjct 7 ASIATPAVNAEKQKKVASALVRYRVLAWITGLWLLFLTGEMVYKYLI-LDNSADAPSWLF 65 Query 61 -IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFG 119 IG +HG Y YL+ T++LA+K RW G T LAGTIP L V EH +T ++K + Sbjct 66 YIGQIHGLFYMLYLVFTIDLAIKARWKPGTTVATALAGTIPFLSFVFEHKRTAQVKQAYQ 125 Query 120 L 120 L Sbjct 126 L 126 >gi|333921279|ref|YP_004494860.1| hypothetical protein AS9A_3622 [Amycolicicoccus subflavus DQS3-9A1] gi|333483500|gb|AEF42060.1| Pks14 protein [Amycolicicoccus subflavus DQS3-9A1] Length=127 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 48/100 (48%), Positives = 69/100 (69%), Gaps = 4/100 (4%) Query 20 RIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW---IGVVHGWVYFTYLLLT 76 R+ +AL YR++A TTG+WL+ L E++++Y + +D P W I +VHGWVYF YL++ Sbjct 25 RVSSALTRYRVLAITTGIWLLVLTVEMIMKYPMNMDLP-EWARIIPIVHGWVYFVYLIMA 83 Query 77 LNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKA 116 +LAVK RW T GVLLAGT+P L VEH T++++A Sbjct 84 TDLAVKARWRPFPTIGVLLAGTVPFLSFYVEHRVTQKVRA 123 >gi|25028955|ref|NP_739009.1| hypothetical protein CE2399 [Corynebacterium efficiens YS-314] gi|259508020|ref|ZP_05750920.1| membrane protein [Corynebacterium efficiens YS-314] gi|23494242|dbj|BAC19209.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164361|gb|EEW48915.1| membrane protein [Corynebacterium efficiens YS-314] Length=173 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/131 (39%), Positives = 76/131 (59%), Gaps = 11/131 (8%) Query 1 MTAPETPAAQH--AEPAIAVE-------RIRTALLGYRIMAWTTGLWLIALCYEIVVRYV 51 +APE P H P ++ R+RTAL + + AW TG++L+AL E+V++Y+ Sbjct 37 FSAPEDPEDFHPVTTPTQTIQIHPERKKRVRTALTAFSVAAWVTGVFLLALVVEMVMKYI 96 Query 52 VKVDNPP--TWIGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHF 109 +++D P T+I + HGWVY +LL TLNL +K RW + +AG +PLL VE+ Sbjct 97 LQMDLPSWATFIPIAHGWVYIVFLLCTLNLGLKARWDPKRWFTTAIAGVVPLLSFFVENN 156 Query 110 QTKEIKARFGL 120 + KE+ F L Sbjct 157 RRKEVIETFQL 167 >gi|326385025|ref|ZP_08206697.1| hypothetical protein SCNU_18878 [Gordonia neofelifaecis NRRL B-59395] gi|326196239|gb|EGD53441.1| hypothetical protein SCNU_18878 [Gordonia neofelifaecis NRRL B-59395] Length=147 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/138 (42%), Positives = 77/138 (56%), Gaps = 27/138 (19%) Query 3 APETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW-- 60 APET + A + +IR+ALL YRI AW TG+WL+ L E+VV V + TW Sbjct 16 APETKGSVTA----SNRQIRSALLRYRIFAWVTGVWLLLLVAEMVV---VALSGGWTWWQ 68 Query 61 ------------IGV------VHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLL 102 +GV VHGW+YF YL+ T++L++KVRW L K +AGTIP L Sbjct 69 TGLTVVPAEGGIVGVMKPVPFVHGWIYFIYLICTVDLSIKVRWSLPKLVLTAIAGTIPFL 128 Query 103 GIVVEHFQTKEIKARFGL 120 EH +T+E+K FG+ Sbjct 129 SFWFEHIRTREVKEEFGI 146 >gi|300780586|ref|ZP_07090441.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300533572|gb|EFK54632.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length=126 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/125 (39%), Positives = 75/125 (60%), Gaps = 5/125 (4%) Query 1 MTAPET-PAAQHAEPAIAVER---IRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVD- 55 MT P++ PA Q +P + ER ++TAL + + AW TG+ L+ LC +++ Y + +D Sbjct 1 MTTPDSQPAPQPGQPRVHPERQRRVKTALNLFSVAAWVTGVMLLLLCARMIMEYGLNMDV 60 Query 56 NPPTWIGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIK 115 + W+ V HGW+Y +LL TLNL +K RW + LAG +P L VE+++ +E+K Sbjct 61 SALNWVAVGHGWMYALFLLATLNLGMKARWSVQTWLVTALAGVVPFLSFFVEYWRRREVK 120 Query 116 ARFGL 120 A F L Sbjct 121 AEFDL 125 >gi|319949717|ref|ZP_08023746.1| hypothetical protein ES5_09605 [Dietzia cinnamea P4] gi|319436607|gb|EFV91698.1| hypothetical protein ES5_09605 [Dietzia cinnamea P4] Length=124 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/125 (39%), Positives = 71/125 (57%), Gaps = 6/125 (4%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVD--NPP 58 MTA P + P ++ AL YR++AW TG+WL+ L E++ +Y++ D + P Sbjct 1 MTAATPPQTDNRRPDPG-GKVAGALKRYRVLAWITGVWLLVLTVEMIYKYLILADSSDAP 59 Query 59 TW---IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIK 115 W IG HG Y YL +TL+LA+K RWP +T LAGTIP L EH +T+++ Sbjct 60 EWFTYIGQAHGVFYILYLFMTLDLAIKARWPATRTLLTALAGTIPFLSFWFEHKRTRDVH 119 Query 116 ARFGL 120 A + + Sbjct 120 AEYAI 124 >gi|296139026|ref|YP_003646269.1| hypothetical protein Tpau_1301 [Tsukamurella paurometabola DSM 20162] gi|296027160|gb|ADG77930.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=125 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/126 (43%), Positives = 71/126 (57%), Gaps = 7/126 (5%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKV--DNP- 57 MT TP A A ++++ AL YR MA TG++L+ LC E++ +YV+ D P Sbjct 1 MTDAPTPTADQLA-AKRRDQVKGALGRYRFMANFTGVFLLILCAELIYKYVIAAIWDLPA 59 Query 58 PTW---IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEI 114 P W IG VHGW Y YLL TL+L +KVRWP + LLAGTIP E + EI Sbjct 60 PEWLWYIGAVHGWGYVIYLLFTLDLGMKVRWPAPRFLLTLLAGTIPFASFYFEKKNSDEI 119 Query 115 KARFGL 120 + +F L Sbjct 120 REQFDL 125 >gi|237785976|ref|YP_002906681.1| hypothetical protein ckrop_1398 [Corynebacterium kroppenstedtii DSM 44385] gi|237758888|gb|ACR18138.1| hypothetical protein ckrop_1398 [Corynebacterium kroppenstedtii DSM 44385] Length=154 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/119 (41%), Positives = 69/119 (58%), Gaps = 8/119 (6%) Query 5 ETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW---I 61 +TP A A R+ +AL Y + A+ TG+WL+ LC E+V +++ +DNPP W I Sbjct 40 DTPRINPARQA----RVASALKRYSVAAYVTGVWLLLLCVEMVFDHLI-LDNPPDWFMYI 94 Query 62 GVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 G+ HG+ + YL++TL+L K RW K LAGTIP L VVE + E++ F L Sbjct 95 GMAHGFFFMVYLIMTLDLGTKARWKPIKWLTTCLAGTIPFLSFVVEARRRHEVQKAFNL 153 >gi|19553699|ref|NP_601701.1| hypothetical protein NCgl2413 [Corynebacterium glutamicum ATCC 13032] gi|62391339|ref|YP_226741.1| hypothetical protein cg2750 [Corynebacterium glutamicum ATCC 13032] gi|145296501|ref|YP_001139322.1| hypothetical protein cgR_2412 [Corynebacterium glutamicum R] gi|21325270|dbj|BAB99892.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC 13032] gi|41326680|emb|CAF21162.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032] gi|140846421|dbj|BAF55420.1| hypothetical protein [Corynebacterium glutamicum R] gi|344043859|gb|EGV39546.1| hypothetical protein CgS9114_12792 [Corynebacterium glutamicum S9114] Length=118 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 41/104 (40%), Positives = 65/104 (63%), Gaps = 2/104 (1%) Query 19 ERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPP--TWIGVVHGWVYFTYLLLT 76 +R+R AL + I AW TG++L+AL E++++Y++ +D P ++ + HGWVY +L+ T Sbjct 13 KRVRQALTMFSIAAWVTGVFLLALVAEMIMKYIIGMDLPEWARFVPIAHGWVYIVFLMTT 72 Query 77 LNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 LNL +K RW + +AG +PLL VEH + KE+ F L Sbjct 73 LNLGLKARWNPTRWVTTAIAGVVPLLSFFVEHNRRKEVTQTFQL 116 >gi|334336267|ref|YP_004541419.1| hypothetical protein Isova_0739 [Isoptericola variabilis 225] gi|334106635|gb|AEG43525.1| hypothetical protein Isova_0739 [Isoptericola variabilis 225] Length=134 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 45/123 (37%), Positives = 70/123 (57%), Gaps = 5/123 (4%) Query 1 MTAPETP--AAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVD--- 55 MT+P+ P A + A A+ + R AL YR++A TG+ L+ LC E+ +YVV VD Sbjct 1 MTSPQQPVPAPTSDQAAAAIRKARGALARYRVLAIVTGVMLLVLCVEMFFKYVVPVDAVV 60 Query 56 NPPTWIGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIK 115 + W+ HGW+Y YL+ L+L K+RW G+ ++LAG +P++ V+E E Sbjct 61 DYMGWVPFAHGWIYVVYLVTVLDLWAKMRWGFGRLVTMVLAGVVPVMSFVLEKKVHAEAD 120 Query 116 ARF 118 A+ Sbjct 121 AKL 123 >gi|317508773|ref|ZP_07966423.1| serine/threonine-protein kinase TAO2 [Segniliparus rugosus ATCC BAA-974] gi|316252936|gb|EFV12356.1| serine/threonine-protein kinase TAO2 [Segniliparus rugosus ATCC BAA-974] Length=123 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/122 (41%), Positives = 70/122 (58%), Gaps = 12/122 (9%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVD---NP 57 MT P+T A+ PA +I AL +R+MAW TGLWL+ L E+V Y+V + Sbjct 1 MTEPKT--ARRYTPA----QILAALRRFRVMAWATGLWLLVLTAEVVYHYLVIPNFGGER 54 Query 58 PTW---IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEI 114 P W IG HGW YF YL+ L+L++K R+ + L+AGT+P L +E +T+E+ Sbjct 55 PDWAKYIGTAHGWFYFVYLITALDLSLKARFEPKRLLVTLIAGTVPFLSFFIERKRTREV 114 Query 115 KA 116 A Sbjct 115 HA 116 >gi|296393946|ref|YP_003658830.1| hypothetical protein Srot_1536 [Segniliparus rotundus DSM 44985] gi|296181093|gb|ADG97999.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=127 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/118 (38%), Positives = 70/118 (60%), Gaps = 10/118 (8%) Query 5 ETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDN---PPTW- 60 E P ++ PA +I AL +++MAW TG+WL+ L E+ Y+V P+W Sbjct 3 EPPPSRRFTPA----QILAALRRFQVMAWATGVWLLVLTAEVAYHYLVIPHFGGVRPSWA 58 Query 61 --IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKA 116 IGV HGW YF YL+ L+L++K R+ +T L+AGT+P L ++E +T+E+++ Sbjct 59 KYIGVAHGWFYFIYLITALDLSLKARFQPKRTLVTLIAGTVPFLSFIIERKRTREVRS 116 >gi|227488226|ref|ZP_03918542.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227542824|ref|ZP_03972873.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227091796|gb|EEI27108.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227181450|gb|EEI62422.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length=119 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 47/118 (40%), Positives = 63/118 (54%), Gaps = 5/118 (4%) Query 5 ETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPP--TWIG 62 ET H E +R+ AL Y I AW TG+WL+ L ++ Y V+ P + IG Sbjct 3 ETTKKIHPERK---KRVAKALRFYSIAAWVTGVWLLVLVTRMICDYGFGVEIPAWASAIG 59 Query 63 VVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 +HG Y YL+ T+NL + RW L K LAGTIP L V EH++ KE+ +F L Sbjct 60 PLHGLFYIIYLVATVNLTTQARWDLTKAFLTALAGTIPFLSFVAEHYRRKEVTEKFEL 117 >gi|172041143|ref|YP_001800857.1| hypothetical protein cur_1463 [Corynebacterium urealyticum DSM 7109] gi|171852447|emb|CAQ05423.1| hypothetical protein cu1463 [Corynebacterium urealyticum DSM 7109] Length=126 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/126 (39%), Positives = 66/126 (53%), Gaps = 7/126 (5%) Query 1 MTAPETP--AAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVV-KVDNP 57 MT P +P A PA +R+ AL Y +MA TG+WL+ L E++ +Y++ DN Sbjct 1 MTQPASPQPAGAKIHPA-RQQRVAKALKWYSVMAIATGIWLLVLVVEMIFKYLILGSDNT 59 Query 58 PTW---IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEI 114 P W IG HG + Y + L+L K RW K +LAG +PLL VEH + E+ Sbjct 60 PAWFSYIGPAHGIFFMLYCITCLDLGTKARWEPSKWLTTILAGVVPLLSFFVEHKRRVEV 119 Query 115 KARFGL 120 K F L Sbjct 120 KKAFAL 125 >gi|340793700|ref|YP_004759163.1| hypothetical protein CVAR_0738 [Corynebacterium variabile DSM 44702] gi|340533610|gb|AEK36090.1| putative membrane protein [Corynebacterium variabile DSM 44702] Length=131 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/131 (35%), Positives = 72/131 (55%), Gaps = 11/131 (8%) Query 1 MTAPETPAAQHAEPAIAV-----ERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVV--- 52 MT P P P +A R++ AL Y +MA+ TG+ L+ LC +++++Y+V Sbjct 1 MTTPARPTQNAGAPIVAATPDRKRRVQGALTRYSVMAYITGVMLLWLCLDMILQYIVFNI 60 Query 53 -KVDNPP--TWIGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHF 109 +D P ++ + HGW++ Y L L+L VK RW GK +LAG IP+L ++E Sbjct 61 ADIDTPGWFKFVAIAHGWIFMVYCLTCLDLGVKARWAPGKWVTTILAGVIPVLSFILERR 120 Query 110 QTKEIKARFGL 120 + E++ FGL Sbjct 121 RRDEVRETFGL 131 >gi|336120976|ref|YP_004575763.1| hypothetical protein MLP_53460 [Microlunatus phosphovorus NM-1] gi|334688775|dbj|BAK38360.1| hypothetical protein MLP_53460 [Microlunatus phosphovorus NM-1] Length=145 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 36/98 (37%), Positives = 58/98 (60%), Gaps = 1/98 (1%) Query 24 ALLGYRIMAWTTGLWLIAL-CYEIVVRYVVKVDNPPTWIGVVHGWVYFTYLLLTLNLAVK 82 AL+ YR+MA+ G LI L C + ++Y+ D TW G+ HGW+Y ++ +L + Sbjct 4 ALIRYRVMAYVVGCLLIVLVCVGVPLKYLGDNDTVVTWTGIPHGWLYMILIITAFDLGRR 63 Query 83 VRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 RW G+ + LAGT+P L V EH+ TK+++A+ + Sbjct 64 ARWGWGRLILIALAGTVPFLSFVAEHYATKDVRAKLSV 101 >gi|260579677|ref|ZP_05847540.1| membrane protein [Corynebacterium jeikeium ATCC 43734] gi|258602196|gb|EEW15510.1| membrane protein [Corynebacterium jeikeium ATCC 43734] Length=121 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/124 (37%), Positives = 66/124 (54%), Gaps = 8/124 (6%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVV-KVDNPPT 59 MT +TPA A R+ +L Y + A TG+WL+ L E++V+Y++ +N P Sbjct 1 MTNEQTPAIHPERRA----RVAKSLKFYSVAAVVTGIWLLILLVEMIVKYLILGSENAPE 56 Query 60 W---IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKA 116 W IG HG V+ Y++ L+L K RW K +LAG +P L +VE + E+KA Sbjct 57 WFSYIGPAHGLVFMVYVISCLDLGTKARWEPSKWVTTMLAGVVPFLSFIVEKRRRDEVKA 116 Query 117 RFGL 120 F L Sbjct 117 AFQL 120 >gi|302554226|ref|ZP_07306568.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302471844|gb|EFL34937.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length=112 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/99 (36%), Positives = 60/99 (61%), Gaps = 3/99 (3%) Query 22 RTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW---IGVVHGWVYFTYLLLTLN 78 ++ L YR+MA+ TG+ L+ L ++ +Y++ +D + +G+ HGW+Y YL+ + Sbjct 3 KSVLTRYRVMAYVTGVLLVLLTIGVIAKYLLDMDGAADFTRVVGIAHGWLYVLYLIFAFD 62 Query 79 LAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKAR 117 L K +WP+GK VLLAGT+P VE + E++A+ Sbjct 63 LGSKAKWPVGKQLWVLLAGTVPTAAFFVERRISHELEAK 101 >gi|329939877|ref|ZP_08289178.1| putative membrane protein [Streptomyces griseoaurantiacus M045] gi|329301447|gb|EGG45342.1| putative membrane protein [Streptomyces griseoaurantiacus M045] Length=109 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/95 (36%), Positives = 55/95 (58%), Gaps = 3/95 (3%) Query 28 YRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW---IGVVHGWVYFTYLLLTLNLAVKVR 84 YR+MA+ TG+ L+ LC ++ +Y VD + + + HGW+Y YL+ +L K + Sbjct 5 YRVMAYVTGVLLVLLCLSMIAKYGFDVDGAADFTRVVAIAHGWLYVVYLVFAFDLGAKAK 64 Query 85 WPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFG 119 WP+ K VLLAGT+P VE ++E++ +F Sbjct 65 WPVAKQLWVLLAGTVPTAAFFVERGISRELEPQFA 99 >gi|29829375|ref|NP_824009.1| hypothetical protein SAV_2833 [Streptomyces avermitilis MA-4680] gi|29606482|dbj|BAC70544.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length=112 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/99 (36%), Positives = 57/99 (58%), Gaps = 3/99 (3%) Query 22 RTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW---IGVVHGWVYFTYLLLTLN 78 ++ L YR++A+ TG+ L+ LC ++ +Y VD + + + HGW+Y YL+ + Sbjct 3 KSVLTRYRVLAYVTGVLLVLLCLSMIAKYGFDVDGAADFTRVVAIAHGWLYVVYLVFAFD 62 Query 79 LAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKAR 117 L K +WP+ K VLLAGTIP VE ++E++ R Sbjct 63 LGAKAKWPVAKQLWVLLAGTIPTAAFFVERRISRELEPR 101 >gi|225021581|ref|ZP_03710773.1| hypothetical protein CORMATOL_01602 [Corynebacterium matruchotii ATCC 33806] gi|305681478|ref|ZP_07404285.1| integral membrane protein [Corynebacterium matruchotii ATCC 14266] gi|224945572|gb|EEG26781.1| hypothetical protein CORMATOL_01602 [Corynebacterium matruchotii ATCC 33806] gi|305659683|gb|EFM49183.1| integral membrane protein [Corynebacterium matruchotii ATCC 14266] Length=116 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/104 (41%), Positives = 60/104 (58%), Gaps = 2/104 (1%) Query 19 ERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPP--TWIGVVHGWVYFTYLLLT 76 +R+RTAL + I AW TG+WL+ L ++ +Y++ + P +IG VHG Y YLL T Sbjct 10 KRVRTALRWFSIAAWVTGVWLLILTTRMIAQYLLGMSIPSWAHYIGQVHGLFYILYLLAT 69 Query 77 LNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKARFGL 120 LNL K WP + LAG IP L VE ++ +E+ +F L Sbjct 70 LNLGTKALWPPLRWVVTALAGCIPFLSFFVERWRRQEVTEKFQL 113 >gi|68535571|ref|YP_250276.1| hypothetical protein jk0501 [Corynebacterium jeikeium K411] gi|68263170|emb|CAI36658.1| hypothetical protein jk0501 [Corynebacterium jeikeium K411] Length=121 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/124 (36%), Positives = 66/124 (54%), Gaps = 8/124 (6%) Query 1 MTAPETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVV-KVDNPPT 59 MT +TP+ A R+ +L Y + A TG+WL+ L E++V+Y++ +N P Sbjct 1 MTNEQTPSIHPERRA----RVAKSLKFYSVAAVVTGIWLLILLVEMIVKYLILGSENAPE 56 Query 60 W---IGVVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKA 116 W IG HG V+ Y++ L+L K RW K +LAG +P L +VE + E+KA Sbjct 57 WFSYIGPAHGLVFMVYVISCLDLGTKARWEPAKWVTTMLAGVVPFLSFIVEKKRRDEVKA 116 Query 117 RFGL 120 F L Sbjct 117 AFQL 120 >gi|302525619|ref|ZP_07277961.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302434514|gb|EFL06330.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=126 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/114 (36%), Positives = 63/114 (56%), Gaps = 1/114 (0%) Query 3 APETPAAQHAEPAIAVERIRTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIG 62 AP T + A PA ++ +L +R A+ TG+ L+ALC +++ Y P Sbjct 9 APMTTSTDGAAPARQ-SKVSGSLTRFRASAYVTGVGLLALCATMIIEYGFGNATPAAVYS 67 Query 63 VVHGWVYFTYLLLTLNLAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKA 116 +HG +Y YL+LT++LA+K RW + T VLLAG +P + VVE T ++A Sbjct 68 PIHGVLYMIYLVLTIDLALKARWSIKSTVLVLLAGCVPFVSFVVERRVTHRVQA 121 >gi|21223774|ref|NP_629553.1| hypothetical protein SCO5414 [Streptomyces coelicolor A3(2)] gi|289769028|ref|ZP_06528406.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|4585852|emb|CAB40911.1| hypothetical protein [Streptomyces coelicolor A3(2)] gi|6808407|emb|CAB70644.1| putative membrane protein [Streptomyces coelicolor A3(2)] gi|289699227|gb|EFD66656.1| conserved hypothetical protein [Streptomyces lividans TK24] Length=109 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/93 (40%), Positives = 56/93 (61%), Gaps = 3/93 (3%) Query 28 YRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWIGVV---HGWVYFTYLLLTLNLAVKVR 84 YR+MA+ TG+ LIALC ++ +YV+ + + VV HGW+Y YL+ +L K + Sbjct 5 YRVMAYVTGVLLIALCLGMIAKYVLDLGGAADFTQVVSIAHGWLYVIYLVFAFDLGSKAK 64 Query 85 WPLGKTAGVLLAGTIPLLGIVVEHFQTKEIKAR 117 WP+ K VLLAGT+P VE ++E+ A+ Sbjct 65 WPVKKQLWVLLAGTVPTAAFFVERRVSQELDAK 97 >gi|297157150|gb|ADI06862.1| hypothetical protein SBI_03741 [Streptomyces bingchenggensis BCW-1] Length=126 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/97 (41%), Positives = 56/97 (58%), Gaps = 3/97 (3%) Query 22 RTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTWI---GVVHGWVYFTYLLLTLN 78 R+ L YR MA+ TG+ LI L ++ +Y++ VD ++ G+ HGW+Y YL+ + Sbjct 17 RSVLTRYRTMAYVTGVLLILLTIGVIAKYLLDVDGASGFVSVVGIAHGWLYVLYLVFAFD 76 Query 79 LAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIK 115 L K +WP GK A VLLAGT+P VE EI+ Sbjct 77 LGSKAKWPFGKLAWVLLAGTVPTAVFFVERKVVAEIE 113 >gi|302542442|ref|ZP_07294784.1| Pks14 protein [Streptomyces hygroscopicus ATCC 53653] gi|302460060|gb|EFL23153.1| Pks14 protein [Streptomyces himastatinicus ATCC 53653] Length=112 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/97 (39%), Positives = 57/97 (59%), Gaps = 3/97 (3%) Query 22 RTALLGYRIMAWTTGLWLIALCYEIVVRYVVKVDNPPTW---IGVVHGWVYFTYLLLTLN 78 R+ L YR MA+ TG+ LI L ++ +Y++ V + +G+ HGW+Y YL+ + Sbjct 3 RSVLTRYRTMAYVTGVLLILLTIGVIAKYLLDVSGAAGFTSVVGIAHGWLYVLYLVFAFD 62 Query 79 LAVKVRWPLGKTAGVLLAGTIPLLGIVVEHFQTKEIK 115 + K +WP GK A VLLAGTIP VE ++E++ Sbjct 63 MGSKAKWPFGKLAWVLLAGTIPTAAFFVERKVSRELE 99 Lambda K H 0.326 0.141 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128530997826 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40