BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1352
Length=123
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608492|ref|NP_215868.1| hypothetical protein Rv1352 [Mycoba... 251 3e-65
gi|183983999|ref|YP_001852290.1| hypothetical protein MMAR_4028 ... 174 4e-42
gi|118619107|ref|YP_907439.1| hypothetical protein MUL_3893 [Myc... 166 1e-39
gi|145225497|ref|YP_001136175.1| hypothetical protein Mflv_4921 ... 97.8 5e-19
gi|118619072|ref|YP_907404.1| hypothetical protein MUL_3846 [Myc... 92.4 2e-17
gi|183983957|ref|YP_001852248.1| hypothetical protein MMAR_3985 ... 92.0 3e-17
gi|342857983|ref|ZP_08714639.1| hypothetical protein MCOL_03875 ... 91.3 4e-17
gi|118472896|ref|YP_885966.1| hypothetical protein MSMEG_1588 [M... 91.3 5e-17
gi|120402508|ref|YP_952337.1| hypothetical protein Mvan_1499 [My... 86.7 1e-15
gi|296170300|ref|ZP_06851891.1| conserved hypothetical protein [... 81.3 4e-14
gi|41408501|ref|NP_961337.1| hypothetical protein MAP2403c [Myco... 80.9 6e-14
gi|118464872|ref|YP_880811.1| hypothetical protein MAV_1578 [Myc... 80.5 7e-14
gi|254819192|ref|ZP_05224193.1| hypothetical protein MintA_04659... 80.5 7e-14
gi|254774400|ref|ZP_05215916.1| hypothetical protein MaviaA2_069... 78.6 3e-13
gi|333992833|ref|YP_004525447.1| hypothetical protein JDM601_419... 56.2 2e-06
gi|15609043|ref|NP_216422.1| hypothetical protein Rv1906c [Mycob... 55.8 2e-06
gi|15841377|ref|NP_336414.1| hypothetical protein MT1957 [Mycoba... 55.8 2e-06
gi|339294841|gb|AEJ46952.1| hypothetical protein CCDC5079_1762 [... 55.5 2e-06
gi|296164931|ref|ZP_06847487.1| conserved hypothetical protein [... 53.5 1e-05
gi|240172583|ref|ZP_04751242.1| hypothetical protein MkanA1_2493... 53.5 1e-05
gi|342857900|ref|ZP_08714556.1| hypothetical protein MCOL_03460 ... 52.8 2e-05
gi|183982808|ref|YP_001851099.1| hypothetical protein MMAR_2802 ... 52.8 2e-05
gi|240170959|ref|ZP_04749618.1| hypothetical protein MkanA1_1673... 51.6 4e-05
gi|118471492|ref|YP_887795.1| hypothetical protein MSMEG_3491 [M... 51.6 4e-05
gi|254774489|ref|ZP_05216005.1| hypothetical protein MaviaA2_074... 51.2 5e-05
gi|118618336|ref|YP_906668.1| hypothetical protein MUL_2927 [Myc... 51.2 6e-05
gi|336460995|gb|EGO39875.1| hypothetical protein MAPs_34340 [Myc... 50.8 6e-05
gi|41408419|ref|NP_961255.1| hypothetical protein MAP2321 [Mycob... 49.7 1e-04
gi|254823128|ref|ZP_05228129.1| hypothetical protein MintA_24580... 49.3 2e-04
gi|118616960|ref|YP_905292.1| hypothetical protein MUL_1252 [Myc... 49.3 2e-04
gi|118466415|ref|YP_880895.1| hypothetical protein MAV_1662 [Myc... 49.3 2e-04
gi|183983592|ref|YP_001851883.1| hypothetical protein MMAR_3613 ... 48.9 3e-04
gi|240167884|ref|ZP_04746543.1| hypothetical protein MkanA1_0111... 47.8 5e-04
gi|118464436|ref|YP_881982.1| hypothetical protein MAV_2795 [Myc... 47.4 8e-04
gi|41407728|ref|NP_960564.1| hypothetical protein MAP1630c [Myco... 47.4 8e-04
gi|336457388|gb|EGO36397.1| hypothetical protein MAPs_22530 [Myc... 47.0 0.001
gi|15828088|ref|NP_302351.1| lipoprotein [Mycobacterium leprae T... 47.0 0.001
gi|342859558|ref|ZP_08716211.1| hypothetical protein MCOL_11783 ... 46.6 0.001
gi|297190749|ref|ZP_06908147.1| predicted protein [Streptomyces ... 45.8 0.002
gi|258651339|ref|YP_003200495.1| hypothetical protein Namu_1099 ... 45.4 0.003
gi|297157986|gb|ADI07698.1| hypothetical protein SBI_04578 [Stre... 43.9 0.008
gi|269836269|ref|YP_003318497.1| hypothetical protein Sthe_0236 ... 43.5 0.011
gi|120406698|ref|YP_956527.1| hypothetical protein Mvan_5756 [My... 42.4 0.021
gi|302534876|ref|ZP_07287218.1| predicted protein [Streptomyces ... 42.0 0.027
gi|145221660|ref|YP_001132338.1| hypothetical protein Mflv_1068 ... 42.0 0.031
gi|108802139|ref|YP_642336.1| hypothetical protein Mmcs_5176 [My... 40.8 0.075
gi|126438120|ref|YP_001073811.1| hypothetical protein Mjls_5557 ... 40.4 0.081
gi|229494457|ref|ZP_04388220.1| conserved hypothetical protein [... 40.4 0.082
gi|226304640|ref|YP_002764598.1| hypothetical protein RER_11510 ... 40.4 0.084
gi|334336394|ref|YP_004541546.1| hypothetical protein Isova_0868... 40.0 0.12
>gi|15608492|ref|NP_215868.1| hypothetical protein Rv1352 [Mycobacterium tuberculosis H37Rv]
gi|15840807|ref|NP_335844.1| hypothetical protein MT1395 [Mycobacterium tuberculosis CDC1551]
gi|31792548|ref|NP_855041.1| hypothetical protein Mb1387 [Mycobacterium bovis AF2122/97]
82 more sequence titles
Length=123
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)
Query 1 MARTLALRASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSN 60
MARTLALRASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSN
Sbjct 1 MARTLALRASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSN 60
Query 61 PLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWM 120
PLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWM
Sbjct 61 PLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWM 120
Query 121 RIS 123
RIS
Sbjct 121 RIS 123
>gi|183983999|ref|YP_001852290.1| hypothetical protein MMAR_4028 [Mycobacterium marinum M]
gi|183177325|gb|ACC42435.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=121
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/114 (74%), Positives = 95/114 (84%), Gaps = 2/114 (1%)
Query 9 ASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGR 68
A+AG+VA M A A A+ G+Q PG+GVFLVGTD+ PGTYRTEGP+NPLILVFGR
Sbjct 9 ATAGIVA--CMTACVFAAPTVADPGDQIPGNGVFLVGTDMLPGTYRTEGPANPLILVFGR 66
Query 69 VSELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRI 122
VSELSTCSWSTHS P S ++I+DTNTSMGPMSVVIPPTVAAFQT NCKLWMR+
Sbjct 67 VSELSTCSWSTHSTPAASTDDIIDTNTSMGPMSVVIPPTVAAFQTMNCKLWMRV 120
>gi|118619107|ref|YP_907439.1| hypothetical protein MUL_3893 [Mycobacterium ulcerans Agy99]
gi|118571217|gb|ABL05968.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=121
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/114 (72%), Positives = 93/114 (82%), Gaps = 2/114 (1%)
Query 9 ASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGR 68
A+AG+VA A A A+ G+Q PG+GVFLVGTD+ PGTYRTEGP+NPLILVFGR
Sbjct 9 ATAGIVA--CTTACVFAAPTVADPGDQIPGNGVFLVGTDMLPGTYRTEGPANPLILVFGR 66
Query 69 VSELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRI 122
VSELSTCSWST S P + ++I+DTNTSMGPMSVVIPPTVAAFQT NCKLWMR+
Sbjct 67 VSELSTCSWSTPSTPAANTDDIIDTNTSMGPMSVVIPPTVAAFQTMNCKLWMRV 120
>gi|145225497|ref|YP_001136175.1| hypothetical protein Mflv_4921 [Mycobacterium gilvum PYR-GCK]
gi|315445850|ref|YP_004078729.1| hypothetical protein Mspyr1_43380 [Mycobacterium sp. Spyr1]
gi|145217983|gb|ABP47387.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315264153|gb|ADU00895.1| hypothetical protein Mspyr1_43380 [Mycobacterium sp. Spyr1]
Length=122
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/124 (44%), Positives = 76/124 (62%), Gaps = 3/124 (2%)
Query 1 MARTLALRASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSN 60
MA+ A+AGLVA AA++ P A AE PG+G+FLVG DIAPG YRT+G ++
Sbjct 1 MAQPRLPHAAAGLVA--VTAAVSFGPPAGAEPVNPIPGNGIFLVGQDIAPGLYRTDGTAS 58
Query 61 PLILVFGRV-SELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLW 119
+ V ++ S C W T+S P+ + +N+V TN S+GPM I TV AF++ NC W
Sbjct 59 VFGVWINDVPTQDSMCLWFTYSTPDTNKDNVVATNMSIGPMYANINATVKAFESRNCAPW 118
Query 120 MRIS 123
R++
Sbjct 119 ARVT 122
>gi|118619072|ref|YP_907404.1| hypothetical protein MUL_3846 [Mycobacterium ulcerans Agy99]
gi|118571182|gb|ABL05933.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=122
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/117 (43%), Positives = 74/117 (64%), Gaps = 3/117 (2%)
Query 8 RASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFG 67
RA+AGLV +A I LAP A A+ + PG+G FLVG DIA G YRT G ++ +
Sbjct 8 RAAAGLVTWVA--TIALAPPALADPIDPIPGNGFFLVGPDIATGLYRTVGSASDWTVWIN 65
Query 68 RV-SELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
V ++ S C W T+S P+ + +++V+TN S+GP+ I TV AF++ NC+ W R++
Sbjct 66 NVPTQDSMCVWFTYSTPDANKDHVVETNISVGPIYANINSTVKAFESQNCQPWTRVT 122
>gi|183983957|ref|YP_001852248.1| hypothetical protein MMAR_3985 [Mycobacterium marinum M]
gi|183177283|gb|ACC42393.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=122
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/117 (43%), Positives = 73/117 (63%), Gaps = 3/117 (2%)
Query 8 RASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFG 67
RA+AGLV +A I LAP A A+ + PG+G FLVG DIA G Y T G ++ +
Sbjct 8 RAAAGLVTWVA--TIALAPPALADPIDPIPGNGFFLVGPDIATGLYHTVGSASDWTVWIN 65
Query 68 RV-SELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
V ++ S C W T+S P+ + +++V+TN S+GPM I TV AF++ NC+ W R++
Sbjct 66 NVPTQDSMCVWFTYSTPDANKDHVVETNISVGPMYANINSTVKAFESQNCQPWTRVT 122
>gi|342857983|ref|ZP_08714639.1| hypothetical protein MCOL_03875 [Mycobacterium colombiense CECT
3035]
gi|342135316|gb|EGT88482.1| hypothetical protein MCOL_03875 [Mycobacterium colombiense CECT
3035]
Length=106
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/106 (44%), Positives = 67/106 (64%), Gaps = 1/106 (0%)
Query 19 MAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRV-SELSTCSW 77
M AI AP A+ + PG+GVF+VG DIAPG YRT G ++ + V ++ S C+W
Sbjct 1 MTAIAAAPTVVADPVDPIPGNGVFVVGPDIAPGLYRTAGSASTFGVWINNVPTQDSMCAW 60
Query 78 STHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
T+S P+ + +++V TN S+GPM I TV AF++ NC+ W R+S
Sbjct 61 FTYSTPDANKDHVVQTNMSVGPMFANINTTVKAFESQNCQPWTRVS 106
>gi|118472896|ref|YP_885966.1| hypothetical protein MSMEG_1588 [Mycobacterium smegmatis str.
MC2 155]
gi|118174183|gb|ABK75079.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=111
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/93 (48%), Positives = 61/93 (66%), Gaps = 1/93 (1%)
Query 32 TGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRV-SELSTCSWSTHSAPEVSNENI 90
T + PG+G FLVGTDIAPG Y T G +P + V ++ S C W T+S P+ + +N+
Sbjct 19 TLDPIPGEGFFLVGTDIAPGLYTTGGSESPFAVWINDVPTQDSMCMWFTYSTPDANKDNV 78
Query 91 VDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
V TN S+GPM+ I TV AF+THNC+ W R++
Sbjct 79 VATNMSVGPMNANINSTVKAFETHNCQPWTRVT 111
>gi|120402508|ref|YP_952337.1| hypothetical protein Mvan_1499 [Mycobacterium vanbaalenii PYR-1]
gi|119955326|gb|ABM12331.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=122
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/99 (44%), Positives = 64/99 (65%), Gaps = 1/99 (1%)
Query 26 PGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRV-SELSTCSWSTHSAPE 84
P A A+ + PG+G FLVG DIAPG YRT G ++P + V ++ S C+W T+S P+
Sbjct 24 PPAGADPMDPIPGNGFFLVGPDIAPGLYRTGGSASPFGVWINDVPTQDSMCAWFTYSTPD 83
Query 85 VSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
+ +++V TN S+GPM I TV AF++ NC+ W R++
Sbjct 84 TNKDHVVATNMSIGPMFANINSTVQAFESRNCQPWTRVT 122
>gi|296170300|ref|ZP_06851891.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895023|gb|EFG74742.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=120
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/94 (43%), Positives = 59/94 (63%), Gaps = 1/94 (1%)
Query 31 ETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRV-SELSTCSWSTHSAPEVSNEN 89
E + PG+GVF+VG DIAPG Y T G + + V ++ S CSW T+S P+ + ++
Sbjct 27 EPLDPIPGNGVFVVGPDIAPGLYHTGGSGSAFGVWINNVPTQESMCSWFTYSTPDANKDH 86
Query 90 IVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
++ TNTS+GPM I V AF++ NC+ W R+S
Sbjct 87 VLQTNTSIGPMYANINTAVKAFESQNCQPWTRVS 120
>gi|41408501|ref|NP_961337.1| hypothetical protein MAP2403c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396857|gb|AAS04720.1| hypothetical protein MAP_2403c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461075|gb|EGO39955.1| hypothetical protein MAPs_35170 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=120
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/118 (44%), Positives = 72/118 (62%), Gaps = 3/118 (2%)
Query 7 LRASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVF 66
LRASA LV + +AAI A A + + PG+GVF+VG DIAPG Y T G + +
Sbjct 5 LRASAVLV--VCVAAIATAAPAFPDPMDPIPGNGVFVVGPDIAPGLYHTGGSGSAFGVWI 62
Query 67 GRV-SELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
V ++ S CSW T+S + + E+++ TNTS+GPM I V AF++ NC+ W R+S
Sbjct 63 NNVPTQDSMCSWFTYSTADANKEHVLQTNTSIGPMYANINSAVKAFESQNCQPWTRVS 120
>gi|118464872|ref|YP_880811.1| hypothetical protein MAV_1578 [Mycobacterium avium 104]
gi|118166159|gb|ABK67056.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=120
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/118 (45%), Positives = 73/118 (62%), Gaps = 3/118 (2%)
Query 7 LRASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVF 66
LRASA LV + +AAI LA A A+ + PG GVF+VG DIAPG Y T G + +
Sbjct 5 LRASAVLV--VCVAAIALAAPAFADPMDPIPGTGVFVVGPDIAPGLYHTGGSGSAFGVWI 62
Query 67 GRV-SELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
V ++ S CSW T+S + + E+++ TNTS+GPM I V AF++ NC+ W R+S
Sbjct 63 NNVPTQDSMCSWFTYSTADANKEHVLQTNTSIGPMYANINSAVKAFESQNCQPWTRVS 120
>gi|254819192|ref|ZP_05224193.1| hypothetical protein MintA_04659 [Mycobacterium intracellulare
ATCC 13950]
Length=113
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/90 (43%), Positives = 57/90 (64%), Gaps = 1/90 (1%)
Query 34 EQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRV-SELSTCSWSTHSAPEVSNENIVD 92
+ PG+GVF+VG DIAPG Y T G + + V ++ S CSW T+S P+ + ++++
Sbjct 23 DPIPGNGVFVVGPDIAPGLYHTGGSGSAFGVWINNVPTQDSMCSWFTYSTPDANKDHVLQ 82
Query 93 TNTSMGPMSVVIPPTVAAFQTHNCKLWMRI 122
TNTS+GPM I V AF++ NC+ W R+
Sbjct 83 TNTSIGPMYANINSAVKAFESQNCQPWTRV 112
>gi|254774400|ref|ZP_05215916.1| hypothetical protein MaviaA2_06985 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=120
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/91 (43%), Positives = 56/91 (62%), Gaps = 1/91 (1%)
Query 34 EQFPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRV-SELSTCSWSTHSAPEVSNENIVD 92
+ PG GVF+VG DIAPG Y T G + + V ++ S CSW T+S + + E+++
Sbjct 30 DPIPGTGVFVVGPDIAPGLYHTGGSGSAFGVWINNVPTQDSMCSWFTYSTADANKEHVLQ 89
Query 93 TNTSMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
TNTS+GPM I V AF++ NC+ W R+S
Sbjct 90 TNTSIGPMYANINSAVKAFESQNCQPWTRVS 120
>gi|333992833|ref|YP_004525447.1| hypothetical protein JDM601_4193 [Mycobacterium sp. JDM601]
gi|333488801|gb|AEF38193.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=147
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (37%), Positives = 40/82 (49%), Gaps = 16/82 (19%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG F VG DIAPGTYR++GP E + C W +S + IVD+ +
Sbjct 41 DGTFTVGKDIAPGTYRSDGP-----------REGNACYWRRNSG-----DKIVDSAMTKK 84
Query 99 PMSVVIPPTVAAFQTHNCKLWM 120
P V+I P+ F+T C W
Sbjct 85 PQVVLIEPSDTTFRTDRCAPWQ 106
>gi|15609043|ref|NP_216422.1| hypothetical protein Rv1906c [Mycobacterium tuberculosis H37Rv]
gi|31793099|ref|NP_855592.1| hypothetical protein Mb1941c [Mycobacterium bovis AF2122/97]
gi|121637812|ref|YP_978035.1| hypothetical protein BCG_1945c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
48 more sequence titles
Length=156
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (38%), Positives = 40/83 (49%), Gaps = 14/83 (16%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG + VG DIAPGTY + GP V + TC W P+ + ++D S
Sbjct 47 DGTYAVGIDIAPGTYSSAGP----------VGD-GTCYWKRMGNPDGA---LIDNALSKK 92
Query 99 PMSVVIPPTVAAFQTHNCKLWMR 121
P V I PT AF+TH C+ W
Sbjct 93 PQVVTIEPTDKAFKTHGCQPWQN 115
>gi|15841377|ref|NP_336414.1| hypothetical protein MT1957 [Mycobacterium tuberculosis CDC1551]
gi|167970394|ref|ZP_02552671.1| hypothetical protein MtubH3_21128 [Mycobacterium tuberculosis
H37Ra]
gi|254232082|ref|ZP_04925409.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
27 more sequence titles
Length=157
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (38%), Positives = 40/83 (49%), Gaps = 14/83 (16%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG + VG DIAPGTY + GP V + TC W P+ + ++D S
Sbjct 48 DGTYAVGIDIAPGTYSSAGP----------VGD-GTCYWKRMGNPDGA---LIDNALSKK 93
Query 99 PMSVVIPPTVAAFQTHNCKLWMR 121
P V I PT AF+TH C+ W
Sbjct 94 PQVVTIEPTDKAFKTHGCQPWQN 116
>gi|339294841|gb|AEJ46952.1| hypothetical protein CCDC5079_1762 [Mycobacterium tuberculosis
CCDC5079]
gi|339298466|gb|AEJ50576.1| hypothetical protein CCDC5180_1739 [Mycobacterium tuberculosis
CCDC5180]
Length=130
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (38%), Positives = 40/83 (49%), Gaps = 14/83 (16%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG + VG DIAPGTY + GP V + TC W P+ + ++D S
Sbjct 21 DGTYAVGIDIAPGTYSSAGP----------VGD-GTCYWKRMGNPDGA---LIDNALSKK 66
Query 99 PMSVVIPPTVAAFQTHNCKLWMR 121
P V I PT AF+TH C+ W
Sbjct 67 PQVVTIEPTDKAFKTHGCQPWQN 89
>gi|296164931|ref|ZP_06847487.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899773|gb|EFG79223.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=191
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (35%), Positives = 39/82 (48%), Gaps = 14/82 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG++ VG+DI PG Y + GP+ + C W P+ NI+D + S
Sbjct 79 DGIYNVGSDIVPGIYSSGGPT-----------DNGACYWKRMGNPD---GNIIDNSMSKK 124
Query 99 PMSVVIPPTVAAFQTHNCKLWM 120
P V I PT AF+T C+ W
Sbjct 125 PQVVQIDPTDKAFKTSGCQPWQ 146
>gi|240172583|ref|ZP_04751242.1| hypothetical protein MkanA1_24935 [Mycobacterium kansasii ATCC
12478]
Length=154
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/82 (38%), Positives = 38/82 (47%), Gaps = 14/82 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG + VGTDIAPGTY + GP TC W PE + ++D S
Sbjct 46 DGTYTVGTDIAPGTYSSAGPVG-----------NGTCYWKRLGNPEGA---LLDNALSKK 91
Query 99 PMSVVIPPTVAAFQTHNCKLWM 120
P V I PT AF+T C+ W
Sbjct 92 PQVVQIEPTDKAFRTSGCQPWQ 113
>gi|342857900|ref|ZP_08714556.1| hypothetical protein MCOL_03460 [Mycobacterium colombiense CECT
3035]
gi|342135233|gb|EGT88399.1| hypothetical protein MCOL_03460 [Mycobacterium colombiense CECT
3035]
Length=134
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (33%), Positives = 39/85 (46%), Gaps = 15/85 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
+G ++V DIA GTYRT+G N C W+ + +++D N G
Sbjct 65 NGTYIVNKDIAAGTYRTDGGRNA-------------CYWA--RLRSFNTNDVIDNNVGDG 109
Query 99 PMSVVIPPTVAAFQTHNCKLWMRIS 123
V I PT AAF T +C W +I
Sbjct 110 QQVVQILPTDAAFMTRSCGKWQKID 134
>gi|183982808|ref|YP_001851099.1| hypothetical protein MMAR_2802 [Mycobacterium marinum M]
gi|183176134|gb|ACC41244.1| conserved membrane protein [Mycobacterium marinum M]
Length=172
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (39%), Positives = 41/81 (51%), Gaps = 14/81 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG + VGTDIAPGTY + GP V + TC W S P+ + ++D +
Sbjct 64 DGTYAVGTDIAPGTYTSAGP----------VGD-GTCYWKRMSNPDGA---LIDNAMTKK 109
Query 99 PMSVVIPPTVAAFQTHNCKLW 119
P V I PT AF+T C+ W
Sbjct 110 PQVVQIEPTDKAFKTSGCQPW 130
>gi|240170959|ref|ZP_04749618.1| hypothetical protein MkanA1_16733 [Mycobacterium kansasii ATCC
12478]
Length=259
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (33%), Positives = 36/84 (43%), Gaps = 14/84 (16%)
Query 36 FPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNT 95
PGDG + VG DI PGTYR++G + C W + ++I+
Sbjct 72 IPGDGTYRVGVDIRPGTYRSQG--------------GNACYWERLRGLGGTVDDIIANGA 117
Query 96 SMGPMSVVIPPTVAAFQTHNCKLW 119
GP V I P AF+T C W
Sbjct 118 GTGPQVVQIAPADVAFKTQGCPAW 141
>gi|118471492|ref|YP_887795.1| hypothetical protein MSMEG_3491 [Mycobacterium smegmatis str.
MC2 155]
gi|118172779|gb|ABK73675.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=166
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (34%), Positives = 42/83 (51%), Gaps = 13/83 (15%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG+++VGTDI PGTY T GP++ TC W + ++ +I+D +
Sbjct 48 DGIYVVGTDIQPGTYATGGPADG-----------QTCYWKRMA--DLHGGDIIDNAFTKK 94
Query 99 PMSVVIPPTVAAFQTHNCKLWMR 121
P V I T AF+T C+ W +
Sbjct 95 PDVVQIEATDKAFKTSGCQPWTQ 117
>gi|254774489|ref|ZP_05216005.1| hypothetical protein MaviaA2_07438 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=114
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (35%), Positives = 42/85 (50%), Gaps = 16/85 (18%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
+G F+V +IA GTYRT+G S C W+ + + ++ I+D N G
Sbjct 46 NGTFIVNKEIAAGTYRTDGKSG--------------CYWARLRSFDTND--IIDNNVGDG 89
Query 99 PMSVVIPPTVAAFQTHNCKLWMRIS 123
V I PT AAF T +C +W +I
Sbjct 90 AQVVRILPTDAAFMTRSCGIWRKID 114
>gi|118618336|ref|YP_906668.1| hypothetical protein MUL_2927 [Mycobacterium ulcerans Agy99]
gi|118570446|gb|ABL05197.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=155
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (38%), Positives = 40/81 (50%), Gaps = 14/81 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG + VGTDI PGTY + GP V + TC W S P+ + ++D +
Sbjct 47 DGTYAVGTDIVPGTYTSAGP----------VGD-GTCYWKRMSNPDGA---LIDNAMTKK 92
Query 99 PMSVVIPPTVAAFQTHNCKLW 119
P V I PT AF+T C+ W
Sbjct 93 PQVVQIEPTDKAFKTSGCQPW 113
>gi|336460995|gb|EGO39875.1| hypothetical protein MAPs_34340 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=86
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/85 (33%), Positives = 41/85 (49%), Gaps = 16/85 (18%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
+G F+V +IA GTYRT+G S C W+ + + ++ I+D N G
Sbjct 18 NGTFIVNKEIAAGTYRTDGKSG--------------CYWARLRSFDTND--IIDNNVGDG 61
Query 99 PMSVVIPPTVAAFQTHNCKLWMRIS 123
V I PT AF T +C +W +I
Sbjct 62 AQVVRILPTDVAFMTRSCGIWRKID 86
>gi|41408419|ref|NP_961255.1| hypothetical protein MAP2321 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396775|gb|AAS04638.1| hypothetical protein MAP_2321 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=112
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (33%), Positives = 41/85 (49%), Gaps = 16/85 (18%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
+G F+V +IA GTYRT+G S C W+ + + ++ I+D N G
Sbjct 44 NGTFIVNKEIAAGTYRTDGKSG--------------CYWARLRSFDTND--IIDNNVGDG 87
Query 99 PMSVVIPPTVAAFQTHNCKLWMRIS 123
V I PT AF T +C +W +I
Sbjct 88 AQVVRILPTDVAFMTRSCGIWRKID 112
>gi|254823128|ref|ZP_05228129.1| hypothetical protein MintA_24580 [Mycobacterium intracellulare
ATCC 13950]
Length=125
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (35%), Positives = 42/85 (50%), Gaps = 15/85 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
+G ++V DIA GTYRT+G +G C W+ + + ++ I+D N G
Sbjct 56 NGTYIVNKDIAAGTYRTDGGK------YG-------CYWARLRSFDTND--IIDNNVGDG 100
Query 99 PMSVVIPPTVAAFQTHNCKLWMRIS 123
P V I PT AF T +C W +I
Sbjct 101 PQVVRIMPTDTAFMTRSCGNWHKID 125
>gi|118616960|ref|YP_905292.1| hypothetical protein MUL_1252 [Mycobacterium ulcerans Agy99]
gi|118569070|gb|ABL03821.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=257
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (33%), Positives = 36/84 (43%), Gaps = 14/84 (16%)
Query 36 FPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNT 95
PGDG F VG DI GTYR+ G +C W + + ++
Sbjct 77 IPGDGTFRVGVDIKAGTYRSAG--------------GDSCYWERLRGVGGTLDEVIANGA 122
Query 96 SMGPMSVVIPPTVAAFQTHNCKLW 119
GP V I P+ AAF+T +C W
Sbjct 123 GTGPQVVQIRPSDAAFKTQHCPPW 146
>gi|118466415|ref|YP_880895.1| hypothetical protein MAV_1662 [Mycobacterium avium 104]
gi|118167702|gb|ABK68599.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=141
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (33%), Positives = 39/85 (46%), Gaps = 16/85 (18%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
+G F+V +IA GTYRT+G S C W+ + +I+D N G
Sbjct 73 NGTFIVNKEIAAGTYRTDGKSG--------------CYWARLRS--FDTNDIIDNNVGDG 116
Query 99 PMSVVIPPTVAAFQTHNCKLWMRIS 123
V I PT AF T +C +W +I
Sbjct 117 AQVVRILPTDVAFMTRSCGIWRKID 141
>gi|183983592|ref|YP_001851883.1| hypothetical protein MMAR_3613 [Mycobacterium marinum M]
gi|183176918|gb|ACC42028.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=260
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (33%), Positives = 36/84 (43%), Gaps = 14/84 (16%)
Query 36 FPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNT 95
PGDG F VG DI GTYR+ G +C W + + ++
Sbjct 80 IPGDGTFRVGVDIKAGTYRSAG--------------GDSCYWERLRGVGGTLDEVIANGA 125
Query 96 SMGPMSVVIPPTVAAFQTHNCKLW 119
GP V I P+ AAF+T +C W
Sbjct 126 GTGPQVVQIRPSDAAFKTQHCPPW 149
>gi|240167884|ref|ZP_04746543.1| hypothetical protein MkanA1_01110 [Mycobacterium kansasii ATCC
12478]
Length=121
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (34%), Positives = 38/81 (47%), Gaps = 16/81 (19%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG +LVG DI PG YRT G +TCSW+ + + +I+D+ G
Sbjct 45 DGTYLVGVDIMPGMYRTAGG--------------ATCSWARLGS--LDTGDIIDSWKGSG 88
Query 99 PMSVVIPPTVAAFQTHNCKLW 119
P + I + AF T +C W
Sbjct 89 PQRIQIKESDTAFLTQDCGTW 109
>gi|118464436|ref|YP_881982.1| hypothetical protein MAV_2795 [Mycobacterium avium 104]
gi|118165723|gb|ABK66620.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=193
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (32%), Positives = 37/82 (46%), Gaps = 14/82 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG++ VGTDIAPG Y + GP TC W P+ + ++D +
Sbjct 64 DGIYAVGTDIAPGVYSSGGPVG-----------NGTCYWKRMGNPDGA---VIDNAMTKK 109
Query 99 PMSVVIPPTVAAFQTHNCKLWM 120
P V I P +F+T C+ W
Sbjct 110 PQVVQIDPGDKSFKTSGCQPWQ 131
>gi|41407728|ref|NP_960564.1| hypothetical protein MAP1630c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396081|gb|AAS03947.1| hypothetical protein MAP_1630c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=208
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (32%), Positives = 37/82 (46%), Gaps = 14/82 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG++ VGTDIAPG Y + GP TC W P+ + ++D +
Sbjct 79 DGIYAVGTDIAPGVYSSGGPVG-----------NGTCYWKRMGNPDGA---VIDNAMTKK 124
Query 99 PMSVVIPPTVAAFQTHNCKLWM 120
P V I P +F+T C+ W
Sbjct 125 PQVVQIDPGDKSFKTSGCQPWQ 146
>gi|336457388|gb|EGO36397.1| hypothetical protein MAPs_22530 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (32%), Positives = 37/82 (46%), Gaps = 14/82 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG++ VGTDIAPG Y + GP TC W P+ + ++D +
Sbjct 64 DGIYAVGTDIAPGVYSSGGPVG-----------NGTCYWKRMGNPDGA---VIDNAMTKK 109
Query 99 PMSVVIPPTVAAFQTHNCKLWM 120
P V I P +F+T C+ W
Sbjct 110 PQVVQIDPGDKSFKTSGCQPWQ 131
>gi|15828088|ref|NP_302351.1| lipoprotein [Mycobacterium leprae TN]
gi|221230565|ref|YP_002503981.1| putative lipoprotein [Mycobacterium leprae Br4923]
gi|2276321|emb|CAA04160.1| putative lipoprotein [Mycobacterium leprae]
gi|4582356|emb|CAB40304.1| hypothetical protein MLCL672.01 [Mycobacterium leprae]
gi|13093642|emb|CAC30965.1| putative lipoprotein [Mycobacterium leprae]
gi|219933672|emb|CAR72107.1| putative lipoprotein [Mycobacterium leprae Br4923]
Length=153
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (36%), Positives = 38/85 (45%), Gaps = 15/85 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG + VGTDIAPGTY + GP G TC W P + +D S
Sbjct 46 DGTYAVGTDIAPGTYSSAGP-------VGN----GTCYWKRIDNP----DGPIDNAMSKK 90
Query 99 PMSVVIPPTVAAFQTHNCKLWMRIS 123
P V I + AF+T C+ W + S
Sbjct 91 PKIVQIEASNKAFKTTGCQPWQQTS 115
>gi|342859558|ref|ZP_08716211.1| hypothetical protein MCOL_11783 [Mycobacterium colombiense CECT
3035]
gi|342132690|gb|EGT85910.1| hypothetical protein MCOL_11783 [Mycobacterium colombiense CECT
3035]
Length=209
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (33%), Positives = 37/82 (46%), Gaps = 14/82 (17%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG++ VGTDI PG Y + GP + TC W S P+ + ++D S
Sbjct 63 DGIYAVGTDIVPGIYSSGGP-----------VDNGTCYWKRMSNPDGA---LIDNAMSKK 108
Query 99 PMSVVIPPTVAAFQTHNCKLWM 120
P V I AF+T C+ W
Sbjct 109 PQVVQIDAGDKAFKTSGCQPWQ 130
>gi|297190749|ref|ZP_06908147.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|297150607|gb|EFH30685.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
Length=195
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (35%), Positives = 37/86 (44%), Gaps = 12/86 (13%)
Query 36 FPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNT 95
F GDG +LVGTDIA GTY+T G FG C W+ + I+ N
Sbjct 120 FAGDGEYLVGTDIAAGTYKTAGADG----SFG-------CYWARLKDASGEFDAIIANNN 168
Query 96 SMGPMSVVIPPTVAAFQTHNCKLWMR 121
GP V + FQT C W +
Sbjct 169 LEGPGRVTL-NKGEYFQTQRCAQWKK 193
>gi|258651339|ref|YP_003200495.1| hypothetical protein Namu_1099 [Nakamurella multipartita DSM
44233]
gi|258554564|gb|ACV77506.1| hypothetical protein Namu_1099 [Nakamurella multipartita DSM
44233]
Length=184
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (33%), Positives = 39/85 (46%), Gaps = 17/85 (20%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG+ LVG D+ PGTYR SE C W+ S S +I+ + S G
Sbjct 117 DGINLVGVDVQPGTYR---------------SENGDCYWARLSGTSGSLNDII--SNSNG 159
Query 99 PMSVVIPPTVAAFQTHNCKLWMRIS 123
V I P+ AF++ C W ++S
Sbjct 160 ATVVTIDPSDRAFESRRCAPWTQVS 184
>gi|297157986|gb|ADI07698.1| hypothetical protein SBI_04578 [Streptomyces bingchenggensis
BCW-1]
Length=239
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (29%), Positives = 37/84 (45%), Gaps = 11/84 (13%)
Query 40 GVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMGP 99
G++ +G DIAPGTY++ G +N +TC W ++I+ G
Sbjct 167 GMYRIGADIAPGTYKSTGNAND-----------ATCYWERSKDALHGIDSIIANENVSGN 215
Query 100 MSVVIPPTVAAFQTHNCKLWMRIS 123
V I F+T+ CK W + S
Sbjct 216 GVVTIAAGDGYFKTNGCKNWKKTS 239
Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/85 (24%), Positives = 36/85 (43%), Gaps = 12/85 (14%)
Query 38 GDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSM 97
GDG F VG+D+ PGTY + ++ + C W ++++ + M
Sbjct 78 GDGTFQVGSDVKPGTYMSTDNTDGM------------CYWERAKDSSGETDSLIANDNVM 125
Query 98 GPMSVVIPPTVAAFQTHNCKLWMRI 122
G V I + F+++ C W +
Sbjct 126 GNAYVTIKASDKIFKSNGCHGWAAV 150
>gi|269836269|ref|YP_003318497.1| hypothetical protein Sthe_0236 [Sphaerobacter thermophilus DSM
20745]
gi|269785532|gb|ACZ37675.1| hypothetical protein Sthe_0236 [Sphaerobacter thermophilus DSM
20745]
Length=473
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/85 (30%), Positives = 32/85 (38%), Gaps = 13/85 (15%)
Query 38 GDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSM 97
GDG++ VG DIAPG +R C W ++I+ S
Sbjct 400 GDGMYRVGRDIAPGLWRNS-------------DSTGFCYWERLRGFSGEFDDIIANEFSN 446
Query 98 GPMSVVIPPTVAAFQTHNCKLWMRI 122
P V I PT F C +W RI
Sbjct 447 APQIVRIAPTDVGFSASRCGIWTRI 471
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/85 (33%), Positives = 33/85 (39%), Gaps = 14/85 (16%)
Query 36 FPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNT 95
FP DG + VG DIAPGTYR S C W S +I+
Sbjct 315 FP-DGTYRVGIDIAPGTYRNTDSSQ-------------FCYWERLSGFTGELNDIIANGF 360
Query 96 SMGPMSVVIPPTVAAFQTHNCKLWM 120
S V I PT A F + C W+
Sbjct 361 SDARQIVTIAPTDAGFVSRRCGRWV 385
>gi|120406698|ref|YP_956527.1| hypothetical protein Mvan_5756 [Mycobacterium vanbaalenii PYR-1]
gi|119959516|gb|ABM16521.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=151
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/82 (31%), Positives = 35/82 (43%), Gaps = 16/82 (19%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
+G + VGT+IAPG Y++ GP + C W + E VD +
Sbjct 53 NGSYAVGTEIAPGVYQSAGP-----------IDGGACYWK-----RTAGEETVDNRLTKK 96
Query 99 PMSVVIPPTVAAFQTHNCKLWM 120
P V I PT F T +C+ W
Sbjct 97 PSFVQIMPTDTTFTTSDCQTWQ 118
>gi|302534876|ref|ZP_07287218.1| predicted protein [Streptomyces sp. C]
gi|302443771|gb|EFL15587.1| predicted protein [Streptomyces sp. C]
Length=249
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/82 (27%), Positives = 35/82 (43%), Gaps = 10/82 (12%)
Query 40 GVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMGP 99
G+F VG D+APGTY++ GP+ + + C W ++I + GP
Sbjct 177 GMFKVGLDLAPGTYKSSGPA----------AGSAGCYWERAKNASHDVDSIAANDNPTGP 226
Query 100 MSVVIPPTVAAFQTHNCKLWMR 121
V + F+T C W +
Sbjct 227 AVVTVSAQDGYFKTTGCATWKK 248
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/85 (28%), Positives = 35/85 (42%), Gaps = 12/85 (14%)
Query 38 GDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSM 97
G G F VG+D+ PGTYRT G ++ C W E+I+ + +
Sbjct 87 GSGTFQVGSDLQPGTYRTTG------------NKGLGCYWERAKDASGEVESILANDNVV 134
Query 98 GPMSVVIPPTVAAFQTHNCKLWMRI 122
G V I F+++ C W +
Sbjct 135 GTSYVTIEAGDKLFKSNGCNDWETV 159
>gi|145221660|ref|YP_001132338.1| hypothetical protein Mflv_1068 [Mycobacterium gilvum PYR-GCK]
gi|315446602|ref|YP_004079481.1| hypothetical protein Mspyr1_51200 [Mycobacterium sp. Spyr1]
gi|145214146|gb|ABP43550.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315264905|gb|ADU01647.1| hypothetical protein Mspyr1_51200 [Mycobacterium sp. Spyr1]
Length=145
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/80 (32%), Positives = 35/80 (44%), Gaps = 16/80 (20%)
Query 40 GVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMGP 99
G + VGT+I PG Y++ GP + C W V+ E +VD + P
Sbjct 47 GSYAVGTEILPGVYQSAGPVD-----------DGACYWK-----RVAGEELVDNALTKKP 90
Query 100 MSVVIPPTVAAFQTHNCKLW 119
V I PT F T +C+ W
Sbjct 91 AFVQIMPTDTTFTTSDCQAW 110
>gi|108802139|ref|YP_642336.1| hypothetical protein Mmcs_5176 [Mycobacterium sp. MCS]
gi|119871292|ref|YP_941244.1| hypothetical protein Mkms_5265 [Mycobacterium sp. KMS]
gi|108772558|gb|ABG11280.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119697381|gb|ABL94454.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=148
Score = 40.8 bits (94), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/81 (30%), Positives = 35/81 (44%), Gaps = 15/81 (18%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG + VG DI PGTY + + TC W A + ++D +
Sbjct 46 DGTYKVGVDILPGTYNAGASGDGM-----------TCYWKRVGA----DGKLLDNALTKK 90
Query 99 PMSVVIPPTVAAFQTHNCKLW 119
SV I T A+F T++C+ W
Sbjct 91 AASVRIEATDASFTTNDCQTW 111
>gi|126438120|ref|YP_001073811.1| hypothetical protein Mjls_5557 [Mycobacterium sp. JLS]
gi|126237920|gb|ABO01321.1| hypothetical protein Mjls_5557 [Mycobacterium sp. JLS]
Length=148
Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/81 (30%), Positives = 35/81 (44%), Gaps = 15/81 (18%)
Query 39 DGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMG 98
DG + VG DI PGTY + + TC W A + ++D +
Sbjct 46 DGTYKVGVDILPGTYNAGASGDGM-----------TCYWKRVGA----DGKLLDNALTKK 90
Query 99 PMSVVIPPTVAAFQTHNCKLW 119
SV I T A+F T++C+ W
Sbjct 91 AASVRIEATDASFTTNDCQTW 111
>gi|229494457|ref|ZP_04388220.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229318819|gb|EEN84677.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=122
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/87 (30%), Positives = 39/87 (45%), Gaps = 10/87 (11%)
Query 37 PGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNTS 96
PG G+F V ++ PGTY T GP VS C + N+++ ++
Sbjct 33 PGHGLFDVPWEVLPGTYTTSGP----------VSADMPCIYGRAKVDGDGELNVLEFEST 82
Query 97 MGPMSVVIPPTVAAFQTHNCKLWMRIS 123
+ P +V I T + F T C W R+S
Sbjct 83 LEPATVTILLTDSRFTTAYCSDWKRVS 109
>gi|226304640|ref|YP_002764598.1| hypothetical protein RER_11510 [Rhodococcus erythropolis PR4]
gi|226183755|dbj|BAH31859.1| hypothetical protein RER_11510 [Rhodococcus erythropolis PR4]
Length=128
Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/88 (30%), Positives = 39/88 (45%), Gaps = 10/88 (11%)
Query 36 FPGDGVFLVGTDIAPGTYRTEGPSNPLILVFGRVSELSTCSWSTHSAPEVSNENIVDTNT 95
PG G+F V ++ PGTY T GP VS C + N+++ +
Sbjct 38 IPGHGLFDVPWEVLPGTYTTSGP----------VSADMPCIYGRAKVDGDGELNVLEFES 87
Query 96 SMGPMSVVIPPTVAAFQTHNCKLWMRIS 123
++ P +V I T + F T C W R+S
Sbjct 88 TLEPATVTILLTDSRFTTAYCADWKRVS 115
>gi|334336394|ref|YP_004541546.1| hypothetical protein Isova_0868 [Isoptericola variabilis 225]
gi|334106762|gb|AEG43652.1| hypothetical protein Isova_0868 [Isoptericola variabilis 225]
Length=224
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/118 (31%), Positives = 45/118 (39%), Gaps = 19/118 (16%)
Query 4 TLALRASAGLVAGMAMAAITLAPGARAETGEQFPGDGVFLVGTDIAPGTYRTEGPSNPLI 63
TLA R A A+T AET Q +G + VG DI PGTYRT P N
Sbjct 125 TLAEREKA---VTEREEAVTAVENRIAETQIQ---EGTWTVGVDIEPGTYRTTEPVN--- 175
Query 64 LVFGRVSELSTCSWSTHSAPEVSNENIVDTNTSMGPMSVVIPPTVAAFQTHNCKLWMR 121
C W + + + +IVD + G V FQT C W +
Sbjct 176 ---------GDCYWGIYRSGS-NKSDIVDNDIVTGGYPTVTLREGQDFQTSRCGSWNK 223
Lambda K H
0.317 0.130 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131390282924
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40