BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1359
Length=250
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840815|ref|NP_335852.1| hypothetical protein MT1403 [Mycoba... 504 4e-141
gi|15608499|ref|NP_215875.1| transcriptional regulatory protein ... 504 6e-141
gi|289569372|ref|ZP_06449599.1| transcriptional regulator [Mycob... 501 4e-140
gi|31792555|ref|NP_855048.1| transcriptional regulatory protein ... 501 5e-140
gi|339294337|gb|AEJ46448.1| hypothetical protein CCDC5079_1258 [... 405 4e-111
gi|254819266|ref|ZP_05224267.1| regulatory protein, LuxR [Mycoba... 200 2e-49
gi|240170120|ref|ZP_04748779.1| regulatory protein, LuxR [Mycoba... 200 2e-49
gi|296169886|ref|ZP_06851498.1| LuxR family transcriptional regu... 196 2e-48
gi|296168206|ref|ZP_06850198.1| LuxR family transcriptional regu... 182 6e-44
gi|120406868|ref|YP_956697.1| regulatory protein LuxR [Mycobacte... 175 5e-42
gi|240173083|ref|ZP_04751741.1| LuxR family transcriptional regu... 173 2e-41
gi|254819180|ref|ZP_05224181.1| regulatory protein, LuxR [Mycoba... 172 4e-41
gi|240169124|ref|ZP_04747783.1| transcriptional regulatory prote... 169 4e-40
gi|183980157|ref|YP_001848448.1| LuxR family transcriptional reg... 167 2e-39
gi|289758620|ref|ZP_06517998.1| transcriptional regulatory prote... 167 2e-39
gi|339632514|ref|YP_004724156.1| LuxR family transcriptional reg... 166 2e-39
gi|308380381|ref|ZP_07669177.1| putative transcriptional regulat... 166 2e-39
gi|340627502|ref|YP_004745954.1| putative transcriptional regula... 166 2e-39
gi|15609625|ref|NP_217004.1| LuxR family transcriptional regulat... 166 2e-39
gi|294994407|ref|ZP_06800098.1| LuxR family transcriptional regu... 166 2e-39
gi|289444015|ref|ZP_06433759.1| probable transcriptional regulat... 166 2e-39
gi|121638369|ref|YP_978593.1| LuxR family transcriptional regula... 166 2e-39
gi|308369732|ref|ZP_07666794.1| hypothetical protein TMBG_01027 ... 166 3e-39
gi|289448131|ref|ZP_06437875.1| LuxR family transcriptional regu... 165 5e-39
gi|253798434|ref|YP_003031435.1| transcriptional regulator, luxR... 165 5e-39
gi|15842015|ref|NP_337052.1| LuxR family transcriptional regulat... 165 6e-39
gi|289575185|ref|ZP_06455412.1| transcriptional regulator, luxR-... 165 6e-39
gi|289445924|ref|ZP_06435668.1| transcriptional regulator, luxR/... 164 2e-38
gi|289748870|ref|ZP_06508248.1| luxR family transcriptional regu... 164 2e-38
gi|289756454|ref|ZP_06515832.1| transcriptional regulator [Mycob... 163 2e-38
gi|289752415|ref|ZP_06511793.1| LuxR/UHPA family transcriptional... 163 2e-38
gi|15607527|ref|NP_214900.1| LuxR/UHPA family transcriptional re... 163 2e-38
gi|289441765|ref|ZP_06431509.1| transcriptional regulator, luxR/... 163 2e-38
gi|289744083|ref|ZP_06503461.1| LuxR family transcriptional regu... 163 2e-38
gi|167966904|ref|ZP_02549181.1| LuxR family transcriptional regu... 163 2e-38
gi|254230743|ref|ZP_04924070.1| hypothetical protein TBCG_00379 ... 163 2e-38
gi|31791563|ref|NP_854056.1| LuxR/UHPA family transcriptional re... 163 2e-38
gi|308378752|ref|ZP_07483786.2| transcriptional regulator [Mycob... 163 2e-38
gi|15839770|ref|NP_334807.1| LuxR family transcriptional regulat... 163 2e-38
gi|148821582|ref|YP_001286336.1| LuxR family transcriptional reg... 163 2e-38
gi|15608031|ref|NP_215406.1| transcriptional regulatory protein ... 163 2e-38
gi|340625902|ref|YP_004744354.1| luxr family transcriptional reg... 163 2e-38
gi|15840309|ref|NP_335346.1| hypothetical protein MT0915 [Mycoba... 163 3e-38
gi|308231665|ref|ZP_07413354.2| transcriptional regulator [Mycob... 162 3e-38
gi|289572971|ref|ZP_06453198.1| transcriptional regulator, luxR/... 162 4e-38
gi|339295373|gb|AEJ47484.1| putative transcriptional regulator, ... 162 4e-38
gi|308231538|ref|ZP_07663879.1| hypothetical protein TMAG_01645 ... 162 4e-38
gi|308232152|ref|ZP_07415096.2| putative transcriptional regulat... 162 4e-38
gi|254363822|ref|ZP_04979868.1| hypothetical transcriptional reg... 161 8e-38
gi|167968337|ref|ZP_02550614.1| hypothetical transcriptional reg... 151 8e-35
>gi|15840815|ref|NP_335852.1| hypothetical protein MT1403 [Mycobacterium tuberculosis CDC1551]
gi|254231609|ref|ZP_04924936.1| hypothetical protein TBCG_01340 [Mycobacterium tuberculosis C]
gi|254364251|ref|ZP_04980297.1| hypothetical transcriptional regulatory protein [Mycobacterium
tuberculosis str. Haarlem]
gi|13881011|gb|AAK45666.1| hypothetical protein MT1403 [Mycobacterium tuberculosis CDC1551]
gi|124600668|gb|EAY59678.1| hypothetical protein TBCG_01340 [Mycobacterium tuberculosis C]
gi|134149765|gb|EBA41810.1| hypothetical transcriptional regulatory protein [Mycobacterium
tuberculosis str. Haarlem]
Length=253
Score = 504 bits (1299), Expect = 4e-141, Method: Compositional matrix adjust.
Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI
Sbjct 4 MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 63
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI
Sbjct 64 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 123
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP
Sbjct 124 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 183
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG 240
MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG
Sbjct 184 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG 243
Query 241 CAAAGMVLAG 250
CAAAGMVLAG
Sbjct 244 CAAAGMVLAG 253
>gi|15608499|ref|NP_215875.1| transcriptional regulatory protein [Mycobacterium tuberculosis
H37Rv]
gi|121637290|ref|YP_977513.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148661148|ref|YP_001282671.1| putative transcriptional regulatory protein [Mycobacterium tuberculosis
H37Ra]
69 more sequence titles
Length=250
Score = 504 bits (1297), Expect = 6e-141, Method: Compositional matrix adjust.
Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI
Sbjct 1 MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI
Sbjct 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP
Sbjct 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG 240
MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG
Sbjct 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG 240
Query 241 CAAAGMVLAG 250
CAAAGMVLAG
Sbjct 241 CAAAGMVLAG 250
>gi|289569372|ref|ZP_06449599.1| transcriptional regulator [Mycobacterium tuberculosis T17]
gi|289543126|gb|EFD46774.1| transcriptional regulator [Mycobacterium tuberculosis T17]
Length=250
Score = 501 bits (1289), Expect = 4e-140, Method: Compositional matrix adjust.
Identities = 248/250 (99%), Positives = 248/250 (99%), Gaps = 0/250 (0%)
Query 1 MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI
Sbjct 1 MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI
Sbjct 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMR WL GLRP
Sbjct 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRVWLFGLRP 180
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG 240
MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG
Sbjct 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG 240
Query 241 CAAAGMVLAG 250
CAAAGMVLAG
Sbjct 241 CAAAGMVLAG 250
>gi|31792555|ref|NP_855048.1| transcriptional regulatory protein [Mycobacterium bovis AF2122/97]
gi|31618144|emb|CAD94255.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium bovis
AF2122/97]
Length=250
Score = 501 bits (1289), Expect = 5e-140, Method: Compositional matrix adjust.
Identities = 249/250 (99%), Positives = 249/250 (99%), Gaps = 0/250 (0%)
Query 1 MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI
Sbjct 1 MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI
Sbjct 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP
Sbjct 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG 240
MEGSPE HNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG
Sbjct 181 MEGSPERHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILVNVQVVPHWEGG 240
Query 241 CAAAGMVLAG 250
CAAAGMVLAG
Sbjct 241 CAAAGMVLAG 250
>gi|339294337|gb|AEJ46448.1| hypothetical protein CCDC5079_1258 [Mycobacterium tuberculosis
CCDC5079]
gi|339297976|gb|AEJ50086.1| hypothetical protein CCDC5180_1249 [Mycobacterium tuberculosis
CCDC5180]
Length=201
Score = 405 bits (1040), Expect = 4e-111, Method: Compositional matrix adjust.
Identities = 201/201 (100%), Positives = 201/201 (100%), Gaps = 0/201 (0%)
Query 50 MRLWGVQSEAITAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELH 109
MRLWGVQSEAITAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELH
Sbjct 1 MRLWGVQSEAITAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELH 60
Query 110 QAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRL 169
QAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRL
Sbjct 61 QAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRL 120
Query 170 PMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILV 229
PMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILV
Sbjct 121 PMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGIPYVGRILV 180
Query 230 NVQVVPHWEGGCAAAGMVLAG 250
NVQVVPHWEGGCAAAGMVLAG
Sbjct 181 NVQVVPHWEGGCAAAGMVLAG 201
>gi|254819266|ref|ZP_05224267.1| regulatory protein, LuxR [Mycobacterium intracellulare ATCC 13950]
Length=1082
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/179 (60%), Positives = 128/179 (72%), Gaps = 5/179 (2%)
Query 39 VTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAH 97
VTLL A VE RLW + E +TAA+V L++ V+ IA H GVR ++QG GD FVAAFA
Sbjct 10 VTLLLADVEGSTRLWETRPEEMTAALVQLNKTVNEAIASHDGVRPLEQGEGDSFVAAFAR 69
Query 98 ASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVM 157
ASDAVACALEL +APL+PI LRIGIHTGE QL D+ YAG T+N A LRDLAHGGQTV+
Sbjct 70 ASDAVACALELQRAPLAPIRLRIGIHTGEIQLRDDANYAGPTINRTARLRDLAHGGQTVL 129
Query 158 SGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIA 216
SG TE V+ RLP WL L GS + P+ +R+ Q+CHP+LRN FPPLR+R A
Sbjct 130 SGVTESLVVDRLPEDVWLADL----GSHPLRDLPRPERVVQVCHPDLRNEFPPLRVRTA 184
>gi|240170120|ref|ZP_04748779.1| regulatory protein, LuxR [Mycobacterium kansasii ATCC 12478]
Length=1010
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/195 (59%), Positives = 134/195 (69%), Gaps = 11/195 (5%)
Query 39 VTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAH 97
VTLL A VE RLW Q E +TAA+ L+R V IA H GVR ++QG GD FVAAFA
Sbjct 10 VTLLLADVEGSTRLWETQPETMTAALAQLNRTVDEAIAAHDGVRPLEQGEGDSFVAAFAR 69
Query 98 ASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVM 157
ASDA+ACALEL +APL+PI LRIGIHTGE QL DE YAG T+N A LRDLAHGGQTV+
Sbjct 70 ASDALACALELQRAPLAPIRLRIGIHTGEIQLRDEANYAGPTINRTARLRDLAHGGQTVL 129
Query 158 SGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIAD 217
SGATE V+ LP WL L G+ + P+ +R+ QLCHP+LRN FPPLR+R A
Sbjct 130 SGATEPLVVDHLPDGVWLADL----GNHPLRDLPRPERVVQLCHPDLRNDFPPLRIRNAG 185
Query 218 AS-GIP-----YVGR 226
AS +P +VGR
Sbjct 186 ASHNLPAQLTTFVGR 200
>gi|296169886|ref|ZP_06851498.1| LuxR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895442|gb|EFG75144.1| LuxR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=1109
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/214 (53%), Positives = 137/214 (65%), Gaps = 6/214 (2%)
Query 1 MFMALRAPMLERMNGLHTDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
MF A ML M+ H + +NW E L VTLL A VE RLW Q E +
Sbjct 1 MFAWFAAAMLATMSQ-HAEMPSLNWNELGVSELLPTGTVTLLLADVEGSTRLWETQPEQM 59
Query 61 TAAMV-LSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLR 119
TAA+ L++ V+ + H GVR ++QG GD FVAAF+ ASDAVACAL + +APL+PI LR
Sbjct 60 TAALARLNKTVNDAVDAHAGVRPLEQGEGDSFVAAFSRASDAVACALAVQRAPLAPIRLR 119
Query 120 IGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLR 179
IGIHTGE QL D+ YAG T+N A LRDLAHGGQTV+SGATE V+ RLP WL L
Sbjct 120 IGIHTGEIQLRDDANYAGPTINRTARLRDLAHGGQTVLSGATESMVVDRLPDGVWLADL- 178
Query 180 PMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRM 213
GS + P+ +R+ QLCHP+L N FPPLR+
Sbjct 179 ---GSYPLRDLPRPERVVQLCHPDLANEFPPLRV 209
>gi|296168206|ref|ZP_06850198.1| LuxR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896822|gb|EFG76452.1| LuxR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=1102
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/193 (53%), Positives = 130/193 (68%), Gaps = 10/193 (5%)
Query 23 VNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAM-VLSRKVSAIIAGHCGVR 81
++W E+ L + VTLL A VE RLW QS+ +TAA+ L++ V+ ++A H GVR
Sbjct 17 LDWSEQSVSELPTGT-VTLLLADVEGSTRLWETQSDTMTAALEQLNQTVNDLVAAHGGVR 75
Query 82 LVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMN 141
V+QG GD FV AFA ASDAVACAL++ + L PI +RIG+HTGE QL D YAG T+N
Sbjct 76 PVEQGEGDSFVLAFARASDAVACALQIQLSVLPPIRIRIGLHTGEVQLRDAGNYAGPTIN 135
Query 142 LAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWL--IGLRPMEGSPEGHNFPQSQRIAQL 199
A LRDLAHGGQTV+SGATE V+ RLP AWL +G+ P+ + P+ +R+ QL
Sbjct 136 RTARLRDLAHGGQTVLSGATEPLVIDRLPADAWLTELGVHPL------RDLPRPERVVQL 189
Query 200 CHPNLRNTFPPLR 212
HP LRN FPPLR
Sbjct 190 NHPGLRNDFPPLR 202
>gi|120406868|ref|YP_956697.1| regulatory protein LuxR [Mycobacterium vanbaalenii PYR-1]
gi|119959686|gb|ABM16691.1| regulatory protein, LuxR [Mycobacterium vanbaalenii PYR-1]
Length=1085
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/177 (54%), Positives = 117/177 (67%), Gaps = 5/177 (2%)
Query 39 VTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAH 97
VTLL A V+ +LW Q E +TAA+ L R ++ +++ H GVR V+QG GD FV AF
Sbjct 10 VTLLLADVQGSTQLWETQPETMTAAVAQLDRTLTDLVSDHDGVRPVEQGEGDSFVVAFTR 69
Query 98 ASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVM 157
ASDAVACAL L +APL+PI LRIG+HTGE +L DE Y G T+N A LR+LAHGGQTV+
Sbjct 70 ASDAVACALALQRAPLAPIRLRIGVHTGEVRLRDEGNYVGPTINRTARLRELAHGGQTVL 129
Query 158 SGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
SG T D V LP WL L G+ + P+ +R+ QLCH +L N FPPLR R
Sbjct 130 SGTTSDLVADLLPDGGWLSDL----GTHRLRDLPRPERVVQLCHADLSNEFPPLRAR 182
>gi|240173083|ref|ZP_04751741.1| LuxR family transcriptional regulator [Mycobacterium kansasii
ATCC 12478]
Length=1102
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/179 (54%), Positives = 115/179 (65%), Gaps = 9/179 (5%)
Query 39 VTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAH 97
VTLL A +E RLW + AA+ L R VS IA H GVR V+QG GD FV AFA
Sbjct 23 VTLLLADIEGSTRLWDTHPGEMAAAITRLDRVVSEAIAAHDGVRPVEQGEGDSFVIAFAR 82
Query 98 ASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDER----IYAGATMNLAAELRDLAHGG 153
ASDAVACA+ L +APL+PI LRIG+HTGE +L + Y G +N A LRDL HGG
Sbjct 83 ASDAVACAVRLQRAPLAPIRLRIGVHTGEVRLRSQTGGDANYVGPAINRTARLRDLGHGG 142
Query 154 QTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLR 212
QTV+SG T D V+ +LP AWL L GS + P+ +R+ QLCHP+LRN FPPLR
Sbjct 143 QTVLSGTTSDLVVDQLPTDAWLADL----GSYPLRDLPRPERVVQLCHPDLRNDFPPLR 197
>gi|254819180|ref|ZP_05224181.1| regulatory protein, LuxR [Mycobacterium intracellulare ATCC 13950]
Length=689
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/177 (53%), Positives = 117/177 (67%), Gaps = 5/177 (2%)
Query 39 VTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAH 97
VTLL A V+ +LWG Q +TAA+ L + ++ ++ H G+R V+QG GD FV AF+
Sbjct 10 VTLLLADVQGSTQLWGSQPREMTAAIAKLDQTLARLVGAHHGIRPVEQGEGDSFVIAFSR 69
Query 98 ASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVM 157
ASDAVACAL L +APL+P+ LRIG+HTGE QL DE Y G +N A LR+LAHGGQTV+
Sbjct 70 ASDAVACALALQRAPLAPLRLRIGVHTGEVQLRDENNYVGPAINRTARLRELAHGGQTVL 129
Query 158 SGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
SG T D V L AWL L G + P+ +R+ QLCHP+LRN FPPLR R
Sbjct 130 SGTTGDLVADTLADGAWLNDL----GIHALRDLPRPERVVQLCHPDLRNEFPPLRHR 182
>gi|240169124|ref|ZP_04747783.1| transcriptional regulatory protein [Mycobacterium kansasii ATCC
12478]
Length=1092
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/172 (52%), Positives = 114/172 (67%), Gaps = 9/172 (5%)
Query 44 AGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAV 102
A +E RLW Q + A+ L + V+ ++ H GVR V+QG GD FVAAF A+DAV
Sbjct 21 ADIEGSTRLWHTQPAQMADAIKHLDQAVAEAVSAHGGVRPVEQGEGDSFVAAFGRAADAV 80
Query 103 ACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATE 162
ACAL+L +A L PI LR+GIHTG+ QL D+ Y G T+N AA LRDLAHGGQT++S T
Sbjct 81 ACALQLQRAQLPPIRLRVGIHTGDVQLRDDSNYVGPTINRAARLRDLAHGGQTLLSATTS 140
Query 163 DAVLGRLPMRAWLI--GLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLR 212
D V+ LP AWLI G++P+ + P+ +R+AQLCHP LRN FP LR
Sbjct 141 DIVIDELPADAWLIDLGIQPL------RDLPRPERVAQLCHPQLRNEFPGLR 186
>gi|183980157|ref|YP_001848448.1| LuxR family transcriptional regulator [Mycobacterium marinum
M]
gi|183173483|gb|ACC38593.1| transcriptional regulatory protein (LuxR- family) [Mycobacterium
marinum M]
Length=1117
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 128/200 (64%), Gaps = 13/200 (6%)
Query 20 DAP-VNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGH 77
+AP V+W + G L VTLL A VE RLW Q E +TAA+ L ++ +A H
Sbjct 13 EAPLVDWSDVDMGELLPTGTVTLLLADVEGSTRLWQNQPEPMTAAVAHLDSVLATTVATH 72
Query 78 CGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERI--- 134
GVR V+QG GD FV AFA A +A+ACAL+L ++PL PI LRIG+HTG+ QL D
Sbjct 73 HGVRPVEQGEGDSFVVAFASAREAIACALDLQRSPLGPIRLRIGVHTGDIQLRDPNDPTN 132
Query 135 YAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWL--IGLRPMEGSPEGHNFPQ 192
Y G T+N A +R+LAHGGQTV+SGAT+ V+ +LP AWL +GL P+ + P+
Sbjct 133 YIGPTINRTARIRELAHGGQTVISGATQLLVVDQLPDGAWLADLGLHPL------RDLPR 186
Query 193 SQRIAQLCHPNLRNTFPPLR 212
+R+ QLCH L+N FPPLR
Sbjct 187 PERVMQLCHSGLQNDFPPLR 206
>gi|289758620|ref|ZP_06517998.1| transcriptional regulatory protein [Mycobacterium tuberculosis
T85]
gi|289714184|gb|EFD78196.1| transcriptional regulatory protein [Mycobacterium tuberculosis
T85]
Length=317
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/214 (49%), Positives = 127/214 (60%), Gaps = 8/214 (3%)
Query 4 ALRA-PMLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
ALRA ML M+ +H D PV+W L VTLL A +E L G Q +
Sbjct 19 ALRAGSMLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLDT- 77
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRI
Sbjct 78 TAIAKLDRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRI 137
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
G+HTGE DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L
Sbjct 138 GMHTGEVSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL-- 195
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
G+ + P+ +R+ QLCHP+L N FPPLR R
Sbjct 196 --GTYRLDDLPRPERVVQLCHPDLHNAFPPLRTR 227
>gi|339632514|ref|YP_004724156.1| LuxR family transcriptional regulator [Mycobacterium africanum
GM041182]
gi|339331870|emb|CCC27573.1| putative transcriptional regulatory protein (LUXR-family) [Mycobacterium
africanum GM041182]
Length=1137
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/214 (49%), Positives = 127/214 (60%), Gaps = 8/214 (3%)
Query 4 ALRA-PMLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
ALRA ML M+ +H D PV+W L VTLL A +E L G Q +
Sbjct 19 ALRAGSMLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-T 77
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRI
Sbjct 78 TAIAKLDRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRI 137
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
G+HTGE DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L
Sbjct 138 GMHTGEVSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL-- 195
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
G+ + P+ +R+ QLCHP+L N FPPLR R
Sbjct 196 --GTYRLDDLPRPERVVQLCHPDLHNAFPPLRTR 227
>gi|308380381|ref|ZP_07669177.1| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu011]
gi|308361672|gb|EFP50523.1| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu011]
Length=1199
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/214 (49%), Positives = 127/214 (60%), Gaps = 8/214 (3%)
Query 4 ALRA-PMLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
ALRA ML M+ +H D PV+W L VTLL A +E L G Q +
Sbjct 81 ALRAGSMLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-T 139
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRI
Sbjct 140 TAIAKLDRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRI 199
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
G+HTGE DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L
Sbjct 200 GMHTGEVSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL-- 257
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
G+ + P+ +R+ QLCHP+L N FPPLR R
Sbjct 258 --GTYRLDDLPRPERVVQLCHPDLHNAFPPLRTR 289
>gi|340627502|ref|YP_004745954.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|340005692|emb|CCC44858.1| putative transcriptional regulatory protein (LUXR-family) [Mycobacterium
canettii CIPT 140010059]
Length=1114
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/233 (47%), Positives = 134/233 (58%), Gaps = 13/233 (5%)
Query 9 MLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMVL 66
ML M+ +H D AP++W L VTLL A +E L G Q +A TA L
Sbjct 1 MLASMSEIHPGVDVAPLDWSADGVSELVPTGTVTLLLADIEGEPHLPGSQLDA-TAIANL 59
Query 67 SRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGE 126
R + ++ H GV VDQG GD F+ AFA ASDAVACAL L +APL+PI LRIG+HTGE
Sbjct 60 DRTLIELVREHHGVCPVDQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRIGMHTGE 119
Query 127 AQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPE 186
D G+T+N A LR+LAHGGQTV+SG T D V LP AWL L G+
Sbjct 120 VSSPDGGNCVGSTINRTARLRELAHGGQTVLSGTTSDLVADLLPTDAWLNDL----GTYR 175
Query 187 GHNFPQSQRIAQLCHPNLRNTFPPLRMRIA-DASGIP-----YVGRILVNVQV 233
+ P+ +R+ QLCHP+L N FPPLR R A G+P VGR+ QV
Sbjct 176 LEDLPRPERVVQLCHPDLHNEFPPLRTRKAVGVHGLPAQLTRLVGRVDEVAQV 228
>gi|15609625|ref|NP_217004.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
H37Rv]
gi|31793667|ref|NP_856160.1| LuxR family transcriptional regulator [Mycobacterium bovis AF2122/97]
gi|148662323|ref|YP_001283846.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
14 more sequence titles
Length=1137
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/214 (49%), Positives = 127/214 (60%), Gaps = 8/214 (3%)
Query 4 ALRA-PMLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
ALRA ML M+ +H D PV+W L VTLL A +E L G Q +
Sbjct 19 ALRAGSMLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-T 77
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRI
Sbjct 78 TAIAKLDRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRI 137
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
G+HTGE DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L
Sbjct 138 GMHTGEVSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL-- 195
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
G+ + P+ +R+ QLCHP+L N FPPLR R
Sbjct 196 --GTYRLDDLPRPERVVQLCHPDLHNAFPPLRTR 227
>gi|294994407|ref|ZP_06800098.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
210]
gi|326904100|gb|EGE51033.1| transcriptional regulator, luxR-family [Mycobacterium tuberculosis
W-148]
Length=1137
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/214 (49%), Positives = 127/214 (60%), Gaps = 8/214 (3%)
Query 4 ALRA-PMLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
ALRA ML M+ +H D PV+W L VTLL A +E L G Q +
Sbjct 19 ALRAGSMLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-T 77
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRI
Sbjct 78 TAIAKLDRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRI 137
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
G+HTGE DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L
Sbjct 138 GMHTGEVSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL-- 195
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
G+ + P+ +R+ QLCHP+L N FPPLR R
Sbjct 196 --GTYRLDDLPRPERVVQLCHPDLHNAFPPLRTR 227
>gi|289444015|ref|ZP_06433759.1| probable transcriptional regulatory protein [Mycobacterium tuberculosis
T46]
gi|289416934|gb|EFD14174.1| probable transcriptional regulatory protein [Mycobacterium tuberculosis
T46]
Length=474
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/208 (48%), Positives = 123/208 (60%), Gaps = 7/208 (3%)
Query 9 MLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMVL 66
ML M+ +H D PV+W L VTLL A +E L G Q + TA L
Sbjct 1 MLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLDT-TAIAKL 59
Query 67 SRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGE 126
R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRIG+HTGE
Sbjct 60 DRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRIGMHTGE 119
Query 127 AQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPE 186
DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L G+
Sbjct 120 VSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL----GTYR 175
Query 187 GHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
+ P+ +R+ QLCHP+L N FPPLR R
Sbjct 176 LDDLPRPERVVQLCHPDLHNAFPPLRTR 203
>gi|121638369|ref|YP_978593.1| LuxR family transcriptional regulator [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224990863|ref|YP_002645550.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|121494017|emb|CAL72495.1| Probable transcriptional regulatory protein (luxR-family) [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224773976|dbj|BAH26782.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|341602407|emb|CCC65083.1| probable transcriptional regulatory protein (luxR-family) [Mycobacterium
bovis BCG str. Moreau RDJ]
Length=1137
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/214 (49%), Positives = 127/214 (60%), Gaps = 8/214 (3%)
Query 4 ALRA-PMLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
ALRA ML M+ +H D PV+W L VTLL A +E L G Q +
Sbjct 19 ALRAGSMLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-T 77
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRI
Sbjct 78 TAIAKLDRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRI 137
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
G+HTGE DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L
Sbjct 138 GMHTGEVSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL-- 195
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
G+ + P+ +R+ QLCHP+L N FPPLR R
Sbjct 196 --GTYRLDDLPRPERVVQLCHPDLHNAFPPLRTR 227
>gi|308369732|ref|ZP_07666794.1| hypothetical protein TMBG_01027 [Mycobacterium tuberculosis SUMu002]
gi|308326619|gb|EFP15470.1| hypothetical protein TMBG_01027 [Mycobacterium tuberculosis SUMu002]
Length=935
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/214 (49%), Positives = 127/214 (60%), Gaps = 8/214 (3%)
Query 4 ALRA-PMLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
ALRA ML M+ +H D PV+W L VTLL A +E L G Q +
Sbjct 81 ALRAGSMLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-T 139
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRI
Sbjct 140 TAIAKLDRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRI 199
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
G+HTGE DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L
Sbjct 200 GMHTGEVSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL-- 257
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
G+ + P+ +R+ QLCHP+L N FPPLR R
Sbjct 258 --GTYRLDDLPRPERVVQLCHPDLHNAFPPLRTR 289
>gi|289448131|ref|ZP_06437875.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
CPHL_A]
gi|289421089|gb|EFD18290.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
CPHL_A]
Length=659
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/208 (48%), Positives = 123/208 (60%), Gaps = 7/208 (3%)
Query 9 MLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMVL 66
ML M+ +H D PV+W L VTLL A +E L G Q + TA L
Sbjct 1 MLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLDT-TAIAKL 59
Query 67 SRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGE 126
R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRIG+HTGE
Sbjct 60 DRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRIGMHTGE 119
Query 127 AQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPE 186
DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L G+
Sbjct 120 VSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL----GTYR 175
Query 187 GHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
+ P+ +R+ QLCHP+L N FPPLR R
Sbjct 176 LDDLPRPERVVQLCHPDLHNAFPPLRTR 203
>gi|253798434|ref|YP_003031435.1| transcriptional regulator, luxR-family [Mycobacterium tuberculosis
KZN 1435]
gi|289553722|ref|ZP_06442932.1| transcriptional regulator, luxR-family [Mycobacterium tuberculosis
KZN 605]
gi|297635092|ref|ZP_06952872.1| transcriptional regulator, luxR-family protein [Mycobacterium
tuberculosis KZN 4207]
gi|297732083|ref|ZP_06961201.1| transcriptional regulator, luxR-family protein [Mycobacterium
tuberculosis KZN R506]
gi|313659419|ref|ZP_07816299.1| transcriptional regulator, luxR-family protein [Mycobacterium
tuberculosis KZN V2475]
gi|253319937|gb|ACT24540.1| transcriptional regulator, luxR-family [Mycobacterium tuberculosis
KZN 1435]
gi|289438354|gb|EFD20847.1| transcriptional regulator, luxR-family [Mycobacterium tuberculosis
KZN 605]
gi|328458202|gb|AEB03625.1| transcriptional regulator, luxR-family [Mycobacterium tuberculosis
KZN 4207]
Length=1137
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/214 (49%), Positives = 126/214 (59%), Gaps = 8/214 (3%)
Query 4 ALRA-PMLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
ALRA ML M+ +H D PV+W L VTLL A +E L G Q +
Sbjct 19 ALRAGSMLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-T 77
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRI
Sbjct 78 TAIAKLDRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRI 137
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
G+HTGE DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L
Sbjct 138 GMHTGEVSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL-- 195
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
G+ + P+ +R+ QLCHP L N FPPLR R
Sbjct 196 --GTYRLDDLPRPERVVQLCHPGLHNAFPPLRTR 227
>gi|15842015|ref|NP_337052.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|289746269|ref|ZP_06505647.1| transcriptional regulator, luxR family [Mycobacterium tuberculosis
02_1987]
gi|308372247|ref|ZP_07427963.2| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu004]
6 more sequence titles
Length=1113
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/208 (48%), Positives = 123/208 (60%), Gaps = 7/208 (3%)
Query 9 MLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMVL 66
ML M+ +H D PV+W L VTLL A +E L G Q + TA L
Sbjct 1 MLASMSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-TTAIAKL 59
Query 67 SRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGE 126
R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRIG+HTGE
Sbjct 60 DRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRIGMHTGE 119
Query 127 AQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPE 186
DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L G+
Sbjct 120 VSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL----GTYR 175
Query 187 GHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
+ P+ +R+ QLCHP+L N FPPLR R
Sbjct 176 LDDLPRPERVVQLCHPDLHNAFPPLRTR 203
>gi|289575185|ref|ZP_06455412.1| transcriptional regulator, luxR-family [Mycobacterium tuberculosis
K85]
gi|289539616|gb|EFD44194.1| transcriptional regulator, luxR-family [Mycobacterium tuberculosis
K85]
Length=1137
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/214 (48%), Positives = 127/214 (60%), Gaps = 8/214 (3%)
Query 4 ALRA-PMLERMNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAI 60
ALRA ML M+ +H D P++W L VTLL A +E L G Q +
Sbjct 19 ALRAGSMLASMSKIHPGVDVVPMDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-T 77
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L R ++ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRI
Sbjct 78 TAIAKLDRTLTELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRI 137
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRP 180
G+HTGE DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L
Sbjct 138 GMHTGEVSSPDEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL-- 195
Query 181 MEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMR 214
G+ + P+ +R+ QLCHP+L N FPPLR R
Sbjct 196 --GTYRLDDLPRPERVVQLCHPDLHNAFPPLRTR 227
>gi|289445924|ref|ZP_06435668.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
CPHL_A]
gi|289418882|gb|EFD16083.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
CPHL_A]
Length=1085
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 2 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 62 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 121
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 122 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 177
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 178 PLRVANDDVAHGLPVHLTRFVGR 200
>gi|289748870|ref|ZP_06508248.1| luxR family transcriptional regulator [Mycobacterium tuberculosis
T92]
gi|289689457|gb|EFD56886.1| luxR family transcriptional regulator [Mycobacterium tuberculosis
T92]
Length=846
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 9 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 68
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 69 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 128
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 129 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 184
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 185 PLRVANDDVAHGLPVHLTRFVGR 207
>gi|289756454|ref|ZP_06515832.1| transcriptional regulator [Mycobacterium tuberculosis T85]
gi|289712018|gb|EFD76030.1| transcriptional regulator [Mycobacterium tuberculosis T85]
Length=943
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 9 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 68
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 69 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 128
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 129 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 184
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 185 PLRVANDDVAHGLPVHLTRFVGR 207
>gi|289752415|ref|ZP_06511793.1| LuxR/UHPA family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
gi|289693002|gb|EFD60431.1| LuxR/UHPA family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
Length=1085
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 2 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 62 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 121
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 122 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 177
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 178 PLRVANDDVAHGLPVHLTRFVGR 200
>gi|15607527|ref|NP_214900.1| LuxR/UHPA family transcriptional regulator [Mycobacterium tuberculosis
H37Rv]
gi|121636299|ref|YP_976522.1| LuxR family transcriptional regulator [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|148660152|ref|YP_001281675.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
43 more sequence titles
gi|224988771|ref|YP_002643458.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253797309|ref|YP_003030310.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
KZN 1435]
gi|254549329|ref|ZP_05139776.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289552635|ref|ZP_06441845.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
KZN 605]
gi|289760498|ref|ZP_06519876.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
GM 1503]
gi|294995142|ref|ZP_06800833.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
210]
gi|297632868|ref|ZP_06950648.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
KZN 4207]
gi|297729843|ref|ZP_06958961.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
KZN R506]
gi|298523861|ref|ZP_07011270.1| hypothetical transcriptional regulatory protein, luxR/uhpA-family
[Mycobacterium tuberculosis 94_M4241A]
gi|306783013|ref|ZP_07421335.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu003]
gi|306787383|ref|ZP_07425705.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu004]
gi|306791934|ref|ZP_07430236.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu005]
gi|306796121|ref|ZP_07434423.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu006]
gi|306806192|ref|ZP_07442860.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu007]
gi|306966388|ref|ZP_07479049.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu009]
gi|306970584|ref|ZP_07483245.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu010]
gi|307078311|ref|ZP_07487481.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu011]
gi|313657172|ref|ZP_07814052.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
KZN V2475]
gi|340625417|ref|YP_004743869.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|2909507|emb|CAA17392.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY LUXR/UHPA-FAMILY)
[Mycobacterium tuberculosis H37Rv]
gi|121491946|emb|CAL70409.1| Probable transcriptional regulatory protein (probably luxR/uhpA-family)
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148504304|gb|ABQ72113.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|224771884|dbj|BAH24690.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253318812|gb|ACT23415.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
KZN 1435]
gi|289437267|gb|EFD19760.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
KZN 605]
gi|289708004|gb|EFD72020.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
GM 1503]
gi|298493655|gb|EFI28949.1| hypothetical transcriptional regulatory protein, luxR/uhpA-family
[Mycobacterium tuberculosis 94_M4241A]
gi|308332180|gb|EFP21031.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu003]
gi|308335939|gb|EFP24790.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu004]
gi|308339591|gb|EFP28442.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu005]
gi|308343445|gb|EFP32296.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu006]
gi|308347337|gb|EFP36188.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu007]
gi|308355934|gb|EFP44785.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu009]
gi|308359891|gb|EFP48742.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu010]
gi|308363792|gb|EFP52643.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
SUMu011]
gi|323721239|gb|EGB30299.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A]
gi|326902212|gb|EGE49145.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
W-148]
gi|328457096|gb|AEB02519.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
KZN 4207]
gi|339293440|gb|AEJ45551.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
CCDC5079]
gi|339297084|gb|AEJ49194.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
CCDC5180]
gi|340003607|emb|CCC42728.1| putative transcriptional regulatory protein (probably LUXR/UHPA-family)
[Mycobacterium canettii CIPT 140010059]
gi|341600315|emb|CCC62985.1| probable transcriptional regulatory protein (probably luxR/uhpA-family)
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344218203|gb|AEM98833.1| LuxR/UHPA family transcriptional regulator [Mycobacterium tuberculosis
CTRI-2]
Length=1085
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 2 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 62 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 121
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 122 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 177
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 178 PLRVANDDVAHGLPVHLTRFVGR 200
>gi|289441765|ref|ZP_06431509.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
T46]
gi|289414684|gb|EFD11924.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
T46]
Length=791
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 2 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 62 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 121
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 122 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 177
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 178 PLRVANDDVAHGLPVHLTRFVGR 200
>gi|289744083|ref|ZP_06503461.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
02_1987]
gi|289684611|gb|EFD52099.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
02_1987]
Length=1085
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 2 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 62 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 121
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 122 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 177
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 178 PLRVANDDVAHGLPVHLTRFVGR 200
>gi|167966904|ref|ZP_02549181.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
Length=1085
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 2 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 62 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 121
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 122 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 177
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 178 PLRVANDDVAHGLPVHLTRFVGR 200
>gi|254230743|ref|ZP_04924070.1| hypothetical protein TBCG_00379 [Mycobacterium tuberculosis C]
gi|124599802|gb|EAY58812.1| hypothetical protein TBCG_00379 [Mycobacterium tuberculosis C]
Length=1090
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 2 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 62 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 121
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 122 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 177
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 178 PLRVANDDVAHGLPVHLTRFVGR 200
>gi|31791563|ref|NP_854056.1| LuxR/UHPA family transcriptional regulator [Mycobacterium bovis
AF2122/97]
gi|31617149|emb|CAD93256.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY LUXR/UHPA-FAMILY)
[Mycobacterium bovis AF2122/97]
Length=1085
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 2 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 62 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 121
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 122 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 177
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 178 PLRVANDDVAHGLPVHLTRFVGR 200
>gi|308378752|ref|ZP_07483786.2| transcriptional regulator [Mycobacterium tuberculosis SUMu010]
gi|308359264|gb|EFP48115.1| transcriptional regulator [Mycobacterium tuberculosis SUMu010]
Length=204
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/205 (48%), Positives = 120/205 (59%), Gaps = 16/205 (7%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
RL VTLL A VE LW + E + A+ L VS I H GV+ V + GD
Sbjct 2 SRLPPTGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FVAAF ASDA ACAL+L + L+PI LRIG+HTGE QL DE +Y G T+N A LRDL
Sbjct 62 SFVAAFTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDE-LYVGPTINRTARLRDL 120
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGL--RPMEGSPEGHNFPQSQRIAQLCHPNLRNT 207
AHGGQ V+S AT D V GRLP AWL+ L P+ G P+ + + QLCHP++R
Sbjct 121 AHGGQVVLSAATGDLVTGRLPADAWLVDLGRHPLRG------LPRPEWVMQLCHPDIREK 174
Query 208 FPPLRMRIADASGI------PYVGR 226
FPPLR + + I +VGR
Sbjct 175 FPPLRTAKSSPTSILPAQFTTFVGR 199
>gi|15839770|ref|NP_334807.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|13879898|gb|AAK44621.1| transcriptional regulator, LuxR family [Mycobacterium tuberculosis
CDC1551]
Length=1092
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 9 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 68
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 69 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 128
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 129 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 184
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 185 PLRVANDDVAHGLPVHLTRFVGR 207
>gi|148821582|ref|YP_001286336.1| LuxR family transcriptional regulator [Mycobacterium tuberculosis
F11]
gi|148720109|gb|ABR04734.1| hypothetical transcriptional regulatory protein, luxR/uhpA-family
[Mycobacterium tuberculosis F11]
Length=1085
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 130/203 (65%), Gaps = 11/203 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 2 SKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGD 61
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDL
Sbjct 62 SFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDL 121
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFP 209
AHGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FP
Sbjct 122 AHGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFP 177
Query 210 PLRMRIAD-ASGIP-----YVGR 226
PLR+ D A G+P +VGR
Sbjct 178 PLRVANDDVAHGLPVHLTRFVGR 200
>gi|15608031|ref|NP_215406.1| transcriptional regulatory protein [Mycobacterium tuberculosis
H37Rv]
gi|148660669|ref|YP_001282192.1| putative transcriptional regulatory protein [Mycobacterium tuberculosis
H37Ra]
gi|1731384|sp|Q10551.1|Y891_MYCTU RecName: Full=Uncharacterized protein Rv0891c/MT0915
gi|1314030|emb|CAA97397.1| POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium tuberculosis
H37Rv]
gi|148504821|gb|ABQ72630.1| putative transcriptional regulatory protein [Mycobacterium tuberculosis
H37Ra]
Length=285
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/194 (49%), Positives = 116/194 (60%), Gaps = 10/194 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
RL VTLL A VE LW + E + A+ L VS I H GV+ V + GD
Sbjct 83 SRLPPTGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGD 142
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FVAAF ASDA ACAL+L + L+PI LRIG+HTGE QL DE +Y G T+N A LRDL
Sbjct 143 SFVAAFTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDE-LYVGPTINRTARLRDL 201
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGL--RPMEGSPEGHNFPQSQRIAQLCHPNLRNT 207
AHGGQ V+S AT D V GRLP AWL+ L P+ G P+ + + QLCHP++R
Sbjct 202 AHGGQVVLSAATGDLVTGRLPADAWLVDLGRHPLRG------LPRPEWVMQLCHPDIREK 255
Query 208 FPPLRMRIADASGI 221
FPPLR + + I
Sbjct 256 FPPLRTAKSSPTSI 269
>gi|340625902|ref|YP_004744354.1| luxr family transcriptional regulator [Mycobacterium canettii
CIPT 140010059]
gi|340004092|emb|CCC43229.1| luxr family transcriptional regulator [Mycobacterium canettii
CIPT 140010059]
Length=1168
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/205 (48%), Positives = 120/205 (59%), Gaps = 16/205 (7%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
RL VTLL A VE LW + E + A+ L VS I H GV+ V + GD
Sbjct 83 SRLLPTGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGD 142
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FVAAF ASDA ACAL+L + L+PI LRIG+HTGE QL DE +Y G T+N A LRDL
Sbjct 143 SFVAAFTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDE-LYVGPTINRTARLRDL 201
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGL--RPMEGSPEGHNFPQSQRIAQLCHPNLRNT 207
AHGGQ V+S AT D V GRLP AWL+ L P+ G P+ + + QLCHP++R
Sbjct 202 AHGGQVVLSAATGDLVTGRLPADAWLVDLGRHPLRG------LPRPEWVMQLCHPDIREK 255
Query 208 FPPLRMRIADASGI------PYVGR 226
FPPLR + + I +VGR
Sbjct 256 FPPLRTAKSSPTSILPAQFTTFVGR 280
>gi|15840309|ref|NP_335346.1| hypothetical protein MT0915 [Mycobacterium tuberculosis CDC1551]
gi|31792079|ref|NP_854572.1| transcriptional regulatory protein [Mycobacterium bovis AF2122/97]
gi|121636814|ref|YP_977037.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
42 more sequence titles
Length=285
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/194 (49%), Positives = 116/194 (60%), Gaps = 10/194 (5%)
Query 31 GRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGD 89
RL VTLL A VE LW + E + A+ L VS I H GV+ V + GD
Sbjct 83 SRLPPTGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGD 142
Query 90 GFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDL 149
FVAAF ASDA ACAL+L + L+PI LRIG+HTGE QL DE +Y G T+N A LRDL
Sbjct 143 SFVAAFTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDE-LYVGPTINRTARLRDL 201
Query 150 AHGGQTVMSGATEDAVLGRLPMRAWLIGL--RPMEGSPEGHNFPQSQRIAQLCHPNLRNT 207
AHGGQ V+S AT D V GRLP AWL+ L P+ G P+ + + QLCHP++R
Sbjct 202 AHGGQVVLSAATGDLVTGRLPADAWLVDLGRHPLRG------LPRPEWVMQLCHPDIREK 255
Query 208 FPPLRMRIADASGI 221
FPPLR + + I
Sbjct 256 FPPLRTAKSSPTSI 269
>gi|308231665|ref|ZP_07413354.2| transcriptional regulator [Mycobacterium tuberculosis SUMu001]
gi|308370132|ref|ZP_07420407.2| transcriptional regulator [Mycobacterium tuberculosis SUMu002]
gi|308370529|ref|ZP_07421884.2| transcriptional regulator [Mycobacterium tuberculosis SUMu003]
19 more sequence titles
Length=201
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/197 (49%), Positives = 118/197 (60%), Gaps = 16/197 (8%)
Query 39 VTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAH 97
VTLL A VE LW + E + A+ L VS I H GV+ V + GD FVAAF
Sbjct 7 VTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAAFTR 66
Query 98 ASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVM 157
ASDA ACAL+L + L+PI LRIG+HTGE QL DE +Y G T+N A LRDLAHGGQ V+
Sbjct 67 ASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDE-LYVGPTINRTARLRDLAHGGQVVL 125
Query 158 SGATEDAVLGRLPMRAWLIGL--RPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRI 215
S AT D V GRLP AWL+ L P+ G P+ + + QLCHP++R FPPLR
Sbjct 126 SAATGDLVTGRLPADAWLVDLGRHPLRG------LPRPEWVMQLCHPDIREKFPPLRTAK 179
Query 216 ADASGI------PYVGR 226
+ + I +VGR
Sbjct 180 SSPTSILPAQFTTFVGR 196
>gi|289572971|ref|ZP_06453198.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
K85]
gi|289537402|gb|EFD41980.1| transcriptional regulator, luxR/uhpA-family [Mycobacterium tuberculosis
K85]
Length=486
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/202 (53%), Positives = 130/202 (65%), Gaps = 11/202 (5%)
Query 32 RLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDG 90
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 3 KLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGDS 62
Query 91 FVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLA 150
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDLA
Sbjct 63 FVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDLA 122
Query 151 HGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPP 210
HGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FPP
Sbjct 123 HGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFPP 178
Query 211 LRMRIAD-ASGIP-----YVGR 226
LR+ D A G+P +VGR
Sbjct 179 LRVANDDVAHGLPVHLTRFVGR 200
>gi|339295373|gb|AEJ47484.1| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis CCDC5079]
gi|339298993|gb|AEJ51103.1| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis CCDC5180]
Length=1109
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/204 (48%), Positives = 121/204 (60%), Gaps = 7/204 (3%)
Query 13 MNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMVLSRKV 70
M+ +H D PV+W L VTLL A +E L G Q + TA L R +
Sbjct 1 MSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-TTAIAKLDRTL 59
Query 71 SAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLV 130
+ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRIG+HTGE
Sbjct 60 TELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRIGMHTGEVSSP 119
Query 131 DERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNF 190
DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L G+ +
Sbjct 120 DEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL----GTYRLDDL 175
Query 191 PQSQRIAQLCHPNLRNTFPPLRMR 214
P+ +R+ QLCHP+L N FPPLR R
Sbjct 176 PRPERVVQLCHPDLHNAFPPLRTR 199
>gi|308231538|ref|ZP_07663879.1| hypothetical protein TMAG_01645 [Mycobacterium tuberculosis SUMu001]
gi|308216985|gb|EFO76384.1| hypothetical protein TMAG_01645 [Mycobacterium tuberculosis SUMu001]
Length=317
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/202 (53%), Positives = 130/202 (65%), Gaps = 11/202 (5%)
Query 32 RLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDG 90
+L R VTLL A VE LW + + AA+ L + VS +IA H GVR V+QG GD
Sbjct 3 KLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEGDS 62
Query 91 FVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLA 150
FV AFA ASDAVA AL+L +A L+PI LRIG+HTGE L DE YAG T+N A LRDLA
Sbjct 63 FVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRDLA 122
Query 151 HGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPP 210
HGGQTV+SG TE V+ RLP +AWL+ L G+ + + +R+ QLCHP LR FPP
Sbjct 123 HGGQTVLSGVTESLVIDRLPDKAWLVDL----GTHALRDLSRPERVMQLCHPELRIDFPP 178
Query 211 LRMRIAD-ASGIP-----YVGR 226
LR+ D A G+P +VGR
Sbjct 179 LRVANDDVAHGLPVHLTRFVGR 200
>gi|308232152|ref|ZP_07415096.2| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu001]
gi|308371029|ref|ZP_07423604.2| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu003]
gi|308373427|ref|ZP_07432269.2| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu005]
gi|308374593|ref|ZP_07436663.2| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu006]
gi|308214848|gb|EFO74247.1| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu001]
gi|308330043|gb|EFP18894.1| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu003]
gi|308337687|gb|EFP26538.1| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu005]
gi|308341368|gb|EFP30219.1| putative transcriptional regulator, LuxR family [Mycobacterium
tuberculosis SUMu006]
Length=1109
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/204 (48%), Positives = 121/204 (60%), Gaps = 7/204 (3%)
Query 13 MNGLH--TDDAPVNWLERRGGRLTSRRRVTLLHAGVEHPMRLWGVQSEAITAAMVLSRKV 70
M+ +H D PV+W L VTLL A +E L G Q + TA L R +
Sbjct 1 MSKIHPGVDVVPVDWSADGVSELVPTGTVTLLLADIEGATHLPGSQLD-TTAIAKLDRTL 59
Query 71 SAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRIGIHTGEAQLV 130
+ ++ H GV V+QG GD F+ AFA ASDAVACAL L +APL+PI LRIG+HTGE
Sbjct 60 TELVREHRGVCPVEQGEGDSFLVAFARASDAVACALGLQRAPLAPIRLRIGMHTGEVSSP 119
Query 131 DERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGLRPMEGSPEGHNF 190
DE G T++ A LR+LAHGGQTV+SG T D V LP AWL L G+ +
Sbjct 120 DEGNCVGPTIDRTARLRELAHGGQTVLSGTTSDLVADLLPKDAWLNDL----GTYRLDDL 175
Query 191 PQSQRIAQLCHPNLRNTFPPLRMR 214
P+ +R+ QLCHP+L N FPPLR R
Sbjct 176 PRPERVVQLCHPDLHNAFPPLRTR 199
>gi|254363822|ref|ZP_04979868.1| hypothetical transcriptional regulatory protein [Mycobacterium
tuberculosis str. Haarlem]
gi|134149336|gb|EBA41381.1| hypothetical transcriptional regulatory protein [Mycobacterium
tuberculosis str. Haarlem]
gi|339293902|gb|AEJ46013.1| hypothetical protein CCDC5079_0823 [Mycobacterium tuberculosis
CCDC5079]
Length=195
Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/197 (49%), Positives = 118/197 (60%), Gaps = 16/197 (8%)
Query 39 VTLLHAGVEHPMRLWGVQSEAITAAMV-LSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAH 97
+TLL A VE LW + E + A+ L VS I H GV+ V + GD FVAAF
Sbjct 1 MTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAAFTR 60
Query 98 ASDAVACALELHQAPLSPIVLRIGIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVM 157
ASDA ACAL+L + L+PI LRIG+HTGE QL DE +Y G T+N A LRDLAHGGQ V+
Sbjct 61 ASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDE-LYVGPTINRTARLRDLAHGGQVVL 119
Query 158 SGATEDAVLGRLPMRAWLIGL--RPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRI 215
S AT D V GRLP AWL+ L P+ G P+ + + QLCHP++R FPPLR
Sbjct 120 SAATGDLVTGRLPADAWLVDLGRHPLRG------LPRPEWVMQLCHPDIREKFPPLRTAK 173
Query 216 ADASGI------PYVGR 226
+ + I +VGR
Sbjct 174 SSPTSILPAQFTTFVGR 190
>gi|167968337|ref|ZP_02550614.1| hypothetical transcriptional regulatory protein [Mycobacterium
tuberculosis H37Ra]
gi|254549868|ref|ZP_05140315.1| putative transcriptional regulatory protein [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=179
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 106/174 (61%), Gaps = 15/174 (8%)
Query 61 TAAMVLSRKVSAIIAGHCGVRLVDQGVGDGFVAAFAHASDAVACALELHQAPLSPIVLRI 120
TA L VS I H GV+ V + GD FVAAF ASDA ACAL+L + L+PI LRI
Sbjct 8 TAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAAFTRASDAAACALDLQRTSLAPIRLRI 67
Query 121 GIHTGEAQLVDERIYAGATMNLAAELRDLAHGGQTVMSGATEDAVLGRLPMRAWLIGL-- 178
G+HTGE QL DE +Y G T+N A LRDLAHGGQ V+S AT D V GRLP AWL+ L
Sbjct 68 GLHTGEVQLRDE-LYVGPTINRTARLRDLAHGGQVVLSAATGDLVTGRLPADAWLVDLGR 126
Query 179 RPMEGSPEGHNFPQSQRIAQLCHPNLRNTFPPLRMRIADASGI------PYVGR 226
P+ G P+ + + QLCHP++R FPPLR + + I +VGR
Sbjct 127 HPLRG------LPRPEWVMQLCHPDIREKFPPLRTAKSSPTSILPAQFTTFVGR 174
Lambda K H
0.324 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 358945203960
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40