BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1363c
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608503|ref|NP_215879.1| hypothetical protein Rv1363c [Mycob... 523 1e-146
gi|31792559|ref|NP_855052.1| hypothetical protein Mb1398c [Mycob... 521 4e-146
gi|308377706|ref|ZP_07480123.2| membrane protein [Mycobacterium ... 487 6e-136
gi|344219195|gb|AEM99825.1| hypothetical protein MTCTRI2_1402 [M... 399 3e-109
gi|15840820|ref|NP_335857.1| hypothetical protein MT1408 [Mycoba... 386 2e-105
gi|306775544|ref|ZP_07413881.1| membrane protein [Mycobacterium ... 345 5e-93
gi|183983966|ref|YP_001852257.1| hypothetical protein MMAR_3994 ... 264 9e-69
gi|118619078|ref|YP_907410.1| hypothetical protein MUL_3858 [Myc... 262 3e-68
gi|41406849|ref|NP_959685.1| hypothetical protein MAP0751c [Myco... 257 1e-66
gi|240170870|ref|ZP_04749529.1| hypothetical protein MkanA1_1627... 252 3e-65
gi|118464140|ref|YP_880199.1| hypothetical protein MAV_0938 [Myc... 246 2e-63
gi|254818319|ref|ZP_05223320.1| hypothetical protein MintA_00245... 244 1e-62
gi|342860424|ref|ZP_08717075.1| hypothetical protein MCOL_16156 ... 235 6e-60
gi|126436244|ref|YP_001071935.1| hypothetical protein Mjls_3667 ... 192 4e-47
gi|108800620|ref|YP_640817.1| hypothetical protein Mmcs_3654 [My... 191 1e-46
gi|296169604|ref|ZP_06851224.1| conserved hypothetical protein [... 184 1e-44
gi|120405086|ref|YP_954915.1| hypothetical protein Mvan_4132 [My... 182 4e-44
gi|315443570|ref|YP_004076449.1| hypothetical protein Mspyr1_195... 181 7e-44
gi|145223113|ref|YP_001133791.1| hypothetical protein Mflv_2526 ... 181 1e-43
gi|118470502|ref|YP_889028.1| hypothetical protein MSMEG_4771 [M... 174 1e-41
gi|118616177|ref|YP_904509.1| hypothetical protein MUL_0306 [Myc... 174 1e-41
gi|183984655|ref|YP_001852946.1| hypothetical protein MMAR_4687 ... 174 1e-41
gi|240171446|ref|ZP_04750105.1| hypothetical protein MkanA1_1918... 169 4e-40
gi|333992917|ref|YP_004525531.1| hypothetical protein JDM601_427... 154 1e-35
gi|333992103|ref|YP_004524717.1| hypothetical protein JDM601_346... 149 5e-34
gi|126432888|ref|YP_001068579.1| hypothetical protein Mjls_0275 ... 149 5e-34
gi|108797264|ref|YP_637461.1| hypothetical protein Mmcs_0284 [My... 147 1e-33
gi|342861410|ref|ZP_08718058.1| hypothetical protein MCOL_21101 ... 145 7e-33
gi|296169587|ref|ZP_06851207.1| conserved hypothetical protein [... 138 7e-31
gi|183984670|ref|YP_001852961.1| hypothetical protein MMAR_4702 ... 137 1e-30
gi|315443159|ref|YP_004076038.1| protein conserved in bacteria (... 136 3e-30
gi|145222695|ref|YP_001133373.1| hypothetical protein Mflv_2107 ... 133 2e-29
gi|15840821|ref|NP_335858.1| hypothetical protein MT1409 [Mycoba... 133 2e-29
gi|118464562|ref|YP_880216.1| hypothetical protein MAV_0956 [Myc... 133 3e-29
gi|254773845|ref|ZP_05215361.1| hypothetical protein MaviaA2_040... 130 2e-28
gi|336461213|gb|EGO40089.1| hypothetical protein MAPs_32980 [Myc... 130 3e-28
gi|41406866|ref|NP_959702.1| hypothetical protein MAP0768c [Myco... 130 3e-28
gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 ... 129 4e-28
gi|120405550|ref|YP_955379.1| hypothetical protein Mvan_4598 [My... 129 6e-28
gi|111018911|ref|YP_701883.1| hypothetical protein RHA1_ro01914 ... 127 1e-27
gi|126436736|ref|YP_001072427.1| hypothetical protein Mjls_4164 ... 127 1e-27
gi|120403843|ref|YP_953672.1| hypothetical protein Mvan_2860 [My... 126 3e-27
gi|145221245|ref|YP_001131923.1| hypothetical protein Mflv_0646 ... 125 6e-27
gi|240173061|ref|ZP_04751719.1| hypothetical protein MkanA1_2736... 125 9e-27
gi|118462309|ref|YP_881188.1| hypothetical protein MAV_1969 [Myc... 123 3e-26
gi|108798629|ref|YP_638826.1| hypothetical protein Mmcs_1660 [My... 122 6e-26
gi|315441860|ref|YP_004074739.1| hypothetical protein Mspyr1_017... 122 6e-26
gi|120401540|ref|YP_951369.1| hypothetical protein Mvan_0519 [My... 122 8e-26
gi|342860440|ref|ZP_08717091.1| hypothetical protein MCOL_16236 ... 121 8e-26
gi|254819944|ref|ZP_05224945.1| hypothetical protein MintA_08466... 121 1e-25
>gi|15608503|ref|NP_215879.1| hypothetical protein Rv1363c [Mycobacterium tuberculosis H37Rv]
gi|121637294|ref|YP_977517.1| hypothetical protein BCG_1425c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148661153|ref|YP_001282676.1| hypothetical protein MRA_1372 [Mycobacterium tuberculosis H37Ra]
72 more sequence titles
Length=261
Score = 523 bits (1346), Expect = 1e-146, Method: Compositional matrix adjust.
Identities = 261/261 (100%), Positives = 261/261 (100%), Gaps = 0/261 (0%)
Query 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN
Sbjct 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
Query 61 VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT 120
VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT
Sbjct 61 VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT 120
Query 121 GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD 180
GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD
Sbjct 121 GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD 180
Query 181 FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR 240
FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR
Sbjct 181 FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR 240
Query 241 LKVTVTEEGGQYKMSKVEFVP 261
LKVTVTEEGGQYKMSKVEFVP
Sbjct 241 LKVTVTEEGGQYKMSKVEFVP 261
>gi|31792559|ref|NP_855052.1| hypothetical protein Mb1398c [Mycobacterium bovis AF2122/97]
gi|31618148|emb|CAD94259.1| POSSIBLE MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97]
Length=261
Score = 521 bits (1342), Expect = 4e-146, Method: Compositional matrix adjust.
Identities = 260/261 (99%), Positives = 260/261 (99%), Gaps = 0/261 (0%)
Query 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN
Sbjct 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
Query 61 VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT 120
VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT
Sbjct 61 VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT 120
Query 121 GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD 180
GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINM SLDFNKAKEDVARVIDSSTGEFRDD
Sbjct 121 GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMNSLDFNKAKEDVARVIDSSTGEFRDD 180
Query 181 FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR 240
FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR
Sbjct 181 FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR 240
Query 241 LKVTVTEEGGQYKMSKVEFVP 261
LKVTVTEEGGQYKMSKVEFVP
Sbjct 241 LKVTVTEEGGQYKMSKVEFVP 261
>gi|308377706|ref|ZP_07480123.2| membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308354859|gb|EFP43710.1| membrane protein [Mycobacterium tuberculosis SUMu009]
Length=243
Score = 487 bits (1254), Expect = 6e-136, Method: Compositional matrix adjust.
Identities = 243/243 (100%), Positives = 243/243 (100%), Gaps = 0/243 (0%)
Query 19 MALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDENVPEEYADWEDAEDYDDYD 78
MALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDENVPEEYADWEDAEDYDDYD
Sbjct 1 MALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDENVPEEYADWEDAEDYDDYD 60
Query 79 DYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQ 138
DYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQ
Sbjct 61 DYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQ 120
Query 139 RAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVV 198
RAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVV
Sbjct 121 RAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVV 180
Query 199 TEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVE 258
TEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVE
Sbjct 181 TEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVE 240
Query 259 FVP 261
FVP
Sbjct 241 FVP 243
>gi|344219195|gb|AEM99825.1| hypothetical protein MTCTRI2_1402 [Mycobacterium tuberculosis
CTRI-2]
Length=258
Score = 399 bits (1024), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 258/261 (99%), Positives = 258/261 (99%), Gaps = 3/261 (1%)
Query 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN
Sbjct 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
Query 61 VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT 120
VPEEYADWEDAEDYDDY EAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT
Sbjct 61 VPEEYADWEDAEDYDDY---EAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT 117
Query 121 GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD 180
GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD
Sbjct 118 GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD 177
Query 181 FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR 240
FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR
Sbjct 178 FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR 237
Query 241 LKVTVTEEGGQYKMSKVEFVP 261
LKVTVTEEGGQYKMSKVEFVP
Sbjct 238 LKVTVTEEGGQYKMSKVEFVP 258
>gi|15840820|ref|NP_335857.1| hypothetical protein MT1408 [Mycobacterium tuberculosis CDC1551]
gi|13881017|gb|AAK45671.1| hypothetical protein MT1408 [Mycobacterium tuberculosis CDC1551]
Length=197
Score = 386 bits (991), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 187/188 (99%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 74 YDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEA 133
+DDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEA
Sbjct 10 HDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEA 69
Query 134 TERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVE 193
TERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVE
Sbjct 70 TERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVE 129
Query 194 QSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYK 253
QSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYK
Sbjct 130 QSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYK 189
Query 254 MSKVEFVP 261
MSKVEFVP
Sbjct 190 MSKVEFVP 197
>gi|306775544|ref|ZP_07413881.1| membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308215970|gb|EFO75369.1| membrane protein [Mycobacterium tuberculosis SUMu001]
Length=263
Score = 345 bits (884), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 250/257 (98%), Positives = 252/257 (99%), Gaps = 0/257 (0%)
Query 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN
Sbjct 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
Query 61 VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT 120
VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT
Sbjct 61 VPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFT 120
Query 121 GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD 180
GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD
Sbjct 121 GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD 180
Query 181 FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR 240
FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR
Sbjct 181 FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR 240
Query 241 LKVTVTEEGGQYKMSKV 257
LKVTVTEEG + K+
Sbjct 241 LKVTVTEEGDSTRCRKL 257
>gi|183983966|ref|YP_001852257.1| hypothetical protein MMAR_3994 [Mycobacterium marinum M]
gi|183177292|gb|ACC42402.1| conserved hypothetical alanine-rich protein [Mycobacterium marinum
M]
Length=274
Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 169/275 (62%), Positives = 200/275 (73%), Gaps = 15/275 (5%)
Query 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAA--RLKREALAMAPAED 58
MAET EP S+ T++A+AMALAAEAEA AEA A AA ARARA +LKREALA+A E+
Sbjct 1 MAETNEPSSELPTTKANAMALAAEAEAEAAEAEALAAAARARARAAQLKREALALAEDEE 60
Query 59 ENVPEEYADWED----------AEDYDDYDDYEAADQEAARSASWRRRLR--VRLPRLST 106
+ E+ +D AED +D + EA D+E + SWR R R+ RLS
Sbjct 61 YDEYEDDEYEDDEEYEDYDDYVAED-EDAESTEAEDEEPNKPLSWRDRAVKWARIARLSI 119
Query 107 IAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDV 166
+ AA++I+ GF GLS Y VW H + T+RQ+RA AF GAK GV+NMTSLDFNKAKEDV
Sbjct 120 VVKVAALLIVFGFAGLSAYFVWNHSQVTQRQERAEAFTDGAKTGVVNMTSLDFNKAKEDV 179
Query 167 ARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRV 226
RVIDSSTGEF+++FQ RAADFTKVVEQSKVVTEGTV+A AVESM H+AVVL++ATS V
Sbjct 180 QRVIDSSTGEFKEEFQSRAADFTKVVEQSKVVTEGTVHAAAVESMEGHTAVVLISATSHV 239
Query 227 TNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
TN K EPR WRL+VTVTEE GQYKMSKVEFVP
Sbjct 240 TNGGDGKQEPRIWRLRVTVTEEDGQYKMSKVEFVP 274
>gi|118619078|ref|YP_907410.1| hypothetical protein MUL_3858 [Mycobacterium ulcerans Agy99]
gi|118571188|gb|ABL05939.1| conserved hypothetical alanine-rich protein [Mycobacterium ulcerans
Agy99]
Length=269
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/270 (63%), Positives = 201/270 (75%), Gaps = 10/270 (3%)
Query 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAA--RLKREALAMAPAED 58
MAET EP S+ T++A+AMALAAEAEA AEA A AA ARARA +LKREALA+A E+
Sbjct 1 MAETNEPSSELPTTKANAMALAAEAEAEAAEAEALAAAARARARAAQLKREALALAEDEE 60
Query 59 ENVPEEYADWED-----AEDYDDYDDYEAADQEAARSASWRRRLR--VRLPRLSTIAMAA 111
+ E+ ++ED AED +D + EA D+E + SWR R R+ RLS + A
Sbjct 61 YDEYEDDEEYEDYDDYVAED-EDAESTEAEDEEPNKPLSWRDRAVKWARIARLSIVVKVA 119
Query 112 AVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVID 171
A++I+ GF GLS Y VW H + T+RQ+RA AF GAK GV+NM SLDFN+AKEDV RVID
Sbjct 120 ALLIVFGFAGLSAYFVWNHGQVTQRQERAEAFTDGAKTGVVNMISLDFNRAKEDVQRVID 179
Query 172 SSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAG 231
SSTGEF+++F RAADFTKVVEQSKVVTEGTV+A AVESM H+AVVL++ATSRVTN
Sbjct 180 SSTGEFKEEFHSRAADFTKVVEQSKVVTEGTVHAAAVESMEGHTAVVLISATSRVTNGGD 239
Query 232 AKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
K EPR WRL+VTVTEE GQYKMSKVEFVP
Sbjct 240 GKQEPRIWRLRVTVTEEDGQYKMSKVEFVP 269
>gi|41406849|ref|NP_959685.1| hypothetical protein MAP0751c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395199|gb|AAS03068.1| hypothetical protein MAP_0751c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461113|gb|EGO39991.1| hypothetical protein MAPs_33170 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=295
Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/216 (61%), Positives = 158/216 (74%), Gaps = 17/216 (7%)
Query 63 EEYADWEDAEDYDDYDDYEAADQEAARSA-----------------SWRRRLRVRLPRLS 105
+E +D +A D DD + +A +EAA+ S R R+RLP S
Sbjct 80 DEVSDSVEATDADDTETTQAETKEAAKETEPKEEAAEETAEDAESESKARSRRLRLPSWS 139
Query 106 TIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKED 165
AA + +IC F SGY++W+ H+ +ER QR A F A A+QGV+NMTSLDFNKAKED
Sbjct 140 VAWKAAVIALICAFVAASGYMMWERHQTSERNQRIANFLAAARQGVVNMTSLDFNKAKED 199
Query 166 VARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSR 225
V RVIDSSTG+FRDDFQQRA DFT VVEQSKVVT+GTVNA AV+S++ +SA+VLVAATSR
Sbjct 200 VQRVIDSSTGQFRDDFQQRAKDFTTVVEQSKVVTQGTVNAAAVQSIDGNSALVLVAATSR 259
Query 226 VTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
+TN+AGAKDEPR WRLKVTVT+EGGQYKMSK+EFVP
Sbjct 260 ITNAAGAKDEPRNWRLKVTVTDEGGQYKMSKLEFVP 295
>gi|240170870|ref|ZP_04749529.1| hypothetical protein MkanA1_16272 [Mycobacterium kansasii ATCC
12478]
Length=238
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 183/275 (67%), Gaps = 51/275 (18%)
Query 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
MA+ T+P S + SQ + A A +A+AA
Sbjct 1 MADATQPHSGSANSQPEVRAWAEQADAA-------------------------------- 28
Query 61 VPEEYADWEDAE-DYDDYDDYEAADQE-------------AARSASWRRRLRVRLPRLST 106
E+ A++ DA+ +Y DYD++ AAD E A R SW R LRV L+
Sbjct 29 -GEDDAEYSDADYEYVDYDEFVAADDETDEVEGQDAAEAAAPRGRSW-RWLRV---LLAG 83
Query 107 IAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDV 166
+A AAAVVIICGF LSG +VWQHH+ T+R +RA AFA GAK+G+INM SLDF KAKEDV
Sbjct 84 LAKAAAVVIICGFAALSGIMVWQHHQTTQRHERAEAFADGAKKGIINMISLDFRKAKEDV 143
Query 167 ARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRV 226
RVIDSSTGEF+D+FQQRAADFTKVVEQSKVVTEGTV ATAVESM+ ++A+VLV+ATSRV
Sbjct 144 QRVIDSSTGEFKDEFQQRAADFTKVVEQSKVVTEGTVTATAVESMDGNTALVLVSATSRV 203
Query 227 TNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
TN K+EPR WRLKVTVTEE GQYKMSKVEFVP
Sbjct 204 TNGGNGKEEPREWRLKVTVTEEDGQYKMSKVEFVP 238
>gi|118464140|ref|YP_880199.1| hypothetical protein MAV_0938 [Mycobacterium avium 104]
gi|254773828|ref|ZP_05215344.1| hypothetical protein MaviaA2_04007 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165427|gb|ABK66324.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=296
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/152 (75%), Positives = 133/152 (88%), Gaps = 0/152 (0%)
Query 110 AAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARV 169
AA + +IC F SGY++W+ H+ +ER QR A F A A+QGV+NMTSLDFNKAKEDV RV
Sbjct 145 AAVIALICAFVAASGYMMWERHQTSERNQRIANFLAAARQGVVNMTSLDFNKAKEDVQRV 204
Query 170 IDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNS 229
IDSSTG+FRDDFQQRA DFT VVEQSKVVT+GTVNA AV+S++ +SA+VLVAATSR+TN+
Sbjct 205 IDSSTGQFRDDFQQRAKDFTTVVEQSKVVTQGTVNAAAVQSIDGNSALVLVAATSRITNA 264
Query 230 AGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
AGAKDEPR WRLKVTVT+EGGQYKMSK+EFVP
Sbjct 265 AGAKDEPRNWRLKVTVTDEGGQYKMSKLEFVP 296
>gi|254818319|ref|ZP_05223320.1| hypothetical protein MintA_00245 [Mycobacterium intracellulare
ATCC 13950]
Length=292
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/168 (68%), Positives = 133/168 (80%), Gaps = 0/168 (0%)
Query 94 RRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVIN 153
R R R+R+P LS A +++IC F SGY++W HE ER QR A F AGA+QGV+N
Sbjct 125 RSRRRLRMPPLSVTWKVAVILLICAFVAASGYMMWNRHEVNERSQRIANFVAGARQGVVN 184
Query 154 MTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNE 213
+TS+D NKAKEDV RVIDSSTG+F DDFQ RA DFT VVEQSKVVT+GTVNA AV+S+N
Sbjct 185 LTSMDCNKAKEDVQRVIDSSTGQFHDDFQARAKDFTTVVEQSKVVTKGTVNAAAVQSING 244
Query 214 HSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
A+VLVAATSR+TN+AGAKDEPR WRLKVTV +GGQYKMS VEF+P
Sbjct 245 DFALVLVAATSRITNAAGAKDEPRNWRLKVTVKNDGGQYKMSNVEFIP 292
>gi|342860424|ref|ZP_08717075.1| hypothetical protein MCOL_16156 [Mycobacterium colombiense CECT
3035]
gi|342132079|gb|EGT85320.1| hypothetical protein MCOL_16156 [Mycobacterium colombiense CECT
3035]
Length=291
Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 107/152 (71%), Positives = 127/152 (84%), Gaps = 0/152 (0%)
Query 110 AAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARV 169
AA +V+IC F SGY++W H+ ER+Q AA F AGA+QGV+N+TS+DFNKAKEDV RV
Sbjct 140 AAVIVLICAFVAASGYMMWNRHQVNERKQHAANFIAGARQGVVNLTSMDFNKAKEDVQRV 199
Query 170 IDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNS 229
IDSSTG+F DDFQ RA DFT VVEQSKVVT+GTVNA AV+S+N +A+VLVAATS +TN+
Sbjct 200 IDSSTGQFHDDFQARAKDFTTVVEQSKVVTQGTVNAAAVQSINGDAALVLVAATSHITNA 259
Query 230 AGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
AGAKDEPR WRLKVTV +GGQYKMS VEF+P
Sbjct 260 AGAKDEPRNWRLKVTVKNDGGQYKMSNVEFIP 291
>gi|126436244|ref|YP_001071935.1| hypothetical protein Mjls_3667 [Mycobacterium sp. JLS]
gi|126236044|gb|ABN99444.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=299
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/155 (58%), Positives = 120/155 (78%), Gaps = 0/155 (0%)
Query 107 IAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDV 166
+A+ AV++IC SGY++W H +A +++ A +AA A+QGV+ + SLDFNKA+EDV
Sbjct 145 LAVTIAVLVICASLAASGYMLWHHRQAVAEREQTAEYAAAARQGVVTLMSLDFNKAQEDV 204
Query 167 ARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRV 226
R+ID+STG+F++DF+Q+A F +V + SKVVTE VN AV+SM++ SA VLV+ATSRV
Sbjct 205 KRIIDNSTGQFKEDFEQQAEAFAEVAQDSKVVTEVNVNLAAVKSMSDDSATVLVSATSRV 264
Query 227 TNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
TN+AGAK EPRAWRL V ++ EG Q KMSKVEFVP
Sbjct 265 TNAAGAKQEPRAWRLAVELSREGDQIKMSKVEFVP 299
>gi|108800620|ref|YP_640817.1| hypothetical protein Mmcs_3654 [Mycobacterium sp. MCS]
gi|119869759|ref|YP_939711.1| hypothetical protein Mkms_3727 [Mycobacterium sp. KMS]
gi|108771039|gb|ABG09761.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695848|gb|ABL92921.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=289
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/156 (60%), Positives = 121/156 (78%), Gaps = 2/156 (1%)
Query 107 IAMAAAVVIICGFTGLSGYIVWQHHEAT-ERQQRAAAFAAGAKQGVINMTSLDFNKAKED 165
+A+ AV++IC SGY++W H +A ER+QRA +AA A+QGV+ + SLDFNKA+ED
Sbjct 135 LAVTIAVLVICASLAASGYMLWHHRQAVAEREQRAE-YAAAARQGVVTLMSLDFNKAQED 193
Query 166 VARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSR 225
V R+ID+STG+F++DF+Q+A F +V + SKVVTE VN AV+SM + SA VLV+ATSR
Sbjct 194 VKRIIDNSTGQFKEDFEQQAEAFAEVAQDSKVVTEVNVNLAAVKSMTDDSASVLVSATSR 253
Query 226 VTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
VTN+AGAK EPRAWRL V ++ EG Q KMSKVEFVP
Sbjct 254 VTNAAGAKQEPRAWRLAVELSREGDQIKMSKVEFVP 289
>gi|296169604|ref|ZP_06851224.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895870|gb|EFG75565.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=307
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/162 (56%), Positives = 124/162 (77%), Gaps = 2/162 (1%)
Query 102 PRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNK 161
P+ ST+A + AV++I SGY++ +H +A +++Q AA F A A+QGV+ +TSLDFN
Sbjct 146 PKWSTLAASLAVLVIIAALAGSGYMINEHRDAVQQRQHAAEFVAAARQGVVTLTSLDFNN 205
Query 162 AKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAV--ESMNEHSAVVL 219
AK+ V R++++STG F+DDF + A DFTKVVEQSKV+++G+V A AV ++M + SAVVL
Sbjct 206 AKQGVQRILENSTGSFKDDFVKMADDFTKVVEQSKVISQGSVQAAAVDLDTMTKDSAVVL 265
Query 220 VAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
VA+TS VTN+AGAK +PR +RL VTV +G Q KMSKVEFVP
Sbjct 266 VASTSDVTNAAGAKQDPRNYRLIVTVARDGRQLKMSKVEFVP 307
>gi|120405086|ref|YP_954915.1| hypothetical protein Mvan_4132 [Mycobacterium vanbaalenii PYR-1]
gi|119957904|gb|ABM14909.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=300
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/141 (62%), Positives = 112/141 (80%), Gaps = 0/141 (0%)
Query 121 GLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDD 180
G SGY+VW H A + +Q+ A +AA A+Q V+ + SLDFNKA+EDV R+ID+STG+F+ D
Sbjct 160 GASGYMVWTHRGAEKLRQQNAEYAAAARQSVVTLMSLDFNKAEEDVQRIIDNSTGQFKTD 219
Query 181 FQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWR 240
F+ +AADF KV + SKVVTE +VN+TAVESM++ SA VLVAA+SRVTN+AGA EPR WR
Sbjct 220 FESQAADFVKVAQDSKVVTEVSVNSTAVESMSDDSAEVLVAASSRVTNTAGANQEPRTWR 279
Query 241 LKVTVTEEGGQYKMSKVEFVP 261
L V++ E GQ KM+KVEFVP
Sbjct 280 LSVSLKREDGQIKMAKVEFVP 300
>gi|315443570|ref|YP_004076449.1| hypothetical protein Mspyr1_19530 [Mycobacterium sp. Spyr1]
gi|315261873|gb|ADT98614.1| hypothetical protein Mspyr1_19530 [Mycobacterium sp. Spyr1]
Length=309
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/171 (54%), Positives = 124/171 (73%), Gaps = 4/171 (2%)
Query 95 RRLRVRLPRLSTIAMAAAVVI-ICG---FTGLSGYIVWQHHEATERQQRAAAFAAGAKQG 150
R+ R+R P +++ +A +VI + G +SGY+ +H +A +Q+ A +AA A+Q
Sbjct 139 RKRRLRRPGWASVGVALVLVIAVLGTAALLAVSGYMRLEHRDAENLRQQNAEYAAAARQS 198
Query 151 VINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVES 210
V+ + SLDFNKA+EDV R+ID+STG+F+DDF+ +AA+F KV + SKVVTE TVN+TAVE
Sbjct 199 VVTLMSLDFNKAEEDVQRIIDNSTGQFKDDFESQAAEFVKVAQDSKVVTEVTVNSTAVER 258
Query 211 MNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
M A VLVAA+SRVTN+AGA EPR WRL V++ E GQ KMSKVEFVP
Sbjct 259 MTGDGAEVLVAASSRVTNTAGADQEPRTWRLSVSLVREDGQIKMSKVEFVP 309
>gi|145223113|ref|YP_001133791.1| hypothetical protein Mflv_2526 [Mycobacterium gilvum PYR-GCK]
gi|145215599|gb|ABP45003.1| hypothetical protein Mflv_2526 [Mycobacterium gilvum PYR-GCK]
Length=295
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/172 (55%), Positives = 125/172 (73%), Gaps = 5/172 (2%)
Query 94 RRRLRVRLPRLSTIAMAAAVVI-ICG---FTGLSGYIVWQHHEATERQQRAAAFAAGAKQ 149
R+RL +R P +++ +A +VI + G +SGY+ +H +A +Q+ A +AA A+Q
Sbjct 125 RKRL-LRRPGWASVGVALVLVIAVLGTAALLAVSGYMRLEHRDAENLRQQNAEYAAAARQ 183
Query 150 GVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVE 209
V+ + SLDFNKA+EDV R+ID+STG+F+DDF+ +AA+F KV + SKVVTE TVN+TAVE
Sbjct 184 SVVTLMSLDFNKAEEDVQRIIDNSTGQFKDDFESQAAEFVKVAQDSKVVTEVTVNSTAVE 243
Query 210 SMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
M A VLVAA+SRVTN+AGA EPR WRL V++ E GQ KMSKVEFVP
Sbjct 244 RMTGDGAEVLVAASSRVTNTAGADQEPRTWRLSVSLVREDGQIKMSKVEFVP 295
>gi|118470502|ref|YP_889028.1| hypothetical protein MSMEG_4771 [Mycobacterium smegmatis str.
MC2 155]
gi|118171789|gb|ABK72685.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=303
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/177 (55%), Positives = 120/177 (68%), Gaps = 0/177 (0%)
Query 85 QEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFA 144
QEA + R P IA VVII G +SG +++ H + + Q+RAA FA
Sbjct 127 QEAQELPEAKLTTRTNAPVWKWIAAGVTVVIILGLLTVSGLMMYHHKQMQDDQRRAAEFA 186
Query 145 AGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVN 204
A A+QGV+ + SLD AKEDV R+ID STG+FR DF+ A DF KV EQ+KV TE VN
Sbjct 187 AAARQGVVTLMSLDHTHAKEDVQRIIDMSTGDFRADFEATAEDFAKVAEQAKVTTEAQVN 246
Query 205 ATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
ATAV+SM + SAVVLVAATSR++NSAGA +PR WRL VTV ++G Q K++KVEFVP
Sbjct 247 ATAVDSMTDDSAVVLVAATSRISNSAGADQDPRNWRLSVTVKQDGDQIKLAKVEFVP 303
>gi|118616177|ref|YP_904509.1| hypothetical protein MUL_0306 [Mycobacterium ulcerans Agy99]
gi|118568287|gb|ABL03038.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=300
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/185 (53%), Positives = 132/185 (72%), Gaps = 3/185 (1%)
Query 79 DYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQ 138
D AD+ A S RR L +R P+LST+ A AV++I S Y+V QH +AT +++
Sbjct 117 DESEADELADESERSRRGL-LRRPKLSTLTAALAVLVILAALAGSAYMVLQHRDATRQRE 175
Query 139 RAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVV 198
R A FAA A+QGVI +TSLDF AK+ + R++D+STG F+D+ + + DF +VV+Q++VV
Sbjct 176 RVAEFAAAARQGVITLTSLDFQDAKQGIGRILDNSTGSFKDELLKSSDDFIQVVQQAQVV 235
Query 199 TEGTVNATAVE--SMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSK 256
+GTV A AV+ SM + SAVVLVA+TS VTN+AGAK +PR +RL VT+T +G Q KMSK
Sbjct 236 EQGTVQAVAVDRNSMTDDSAVVLVASTSEVTNAAGAKKDPRKYRLIVTITRDGDQLKMSK 295
Query 257 VEFVP 261
VEFVP
Sbjct 296 VEFVP 300
>gi|183984655|ref|YP_001852946.1| hypothetical protein MMAR_4687 [Mycobacterium marinum M]
gi|183177981|gb|ACC43091.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=327
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/185 (53%), Positives = 132/185 (72%), Gaps = 3/185 (1%)
Query 79 DYEAADQEAARSASWRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQ 138
D AD+ A S RR L +R P+LST+ A AV++I S Y+V QH +AT +++
Sbjct 144 DESEADELADESERSRRGL-LRRPKLSTLTAALAVLVILAALAGSAYMVLQHRDATRQRE 202
Query 139 RAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVV 198
R A FAA A+QGVI +TSLDF AK+ + R++D+STG F+D+ + + DF +VV+Q++VV
Sbjct 203 RVAEFAAAARQGVITLTSLDFQDAKQGIGRILDNSTGSFKDELLKSSDDFIQVVQQAQVV 262
Query 199 TEGTVNATAVE--SMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSK 256
+GTV A AV+ SM + SAVVLVA+TS VTN+AGAK +PR +RL VT+T +G Q KMSK
Sbjct 263 EQGTVQAVAVDRNSMTDDSAVVLVASTSEVTNAAGAKKDPRKYRLIVTITRDGDQLKMSK 322
Query 257 VEFVP 261
VEFVP
Sbjct 323 VEFVP 327
>gi|240171446|ref|ZP_04750105.1| hypothetical protein MkanA1_19186 [Mycobacterium kansasii ATCC
12478]
Length=303
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/145 (59%), Positives = 110/145 (76%), Gaps = 4/145 (2%)
Query 121 GLSG--YIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFR 178
GLSG +++ +H +AT + R A FAA A+QGV+ +TSLDF AK+ V R++D+STG FR
Sbjct 159 GLSGSLFMLVKHRDATRHRDRVAEFAAAARQGVVTLTSLDFTNAKQGVQRILDNSTGTFR 218
Query 179 DDFQQRAADFTKVVEQSKVVTEGTVNATA--VESMNEHSAVVLVAATSRVTNSAGAKDEP 236
DD + A DF KVVEQSKVV +GTV A A V++M + SAVVLVA+TS VTN+AGA+ +P
Sbjct 219 DDMAKVADDFIKVVEQSKVVEQGTVQAVAVDVDTMTDDSAVVLVASTSEVTNAAGARQDP 278
Query 237 RAWRLKVTVTEEGGQYKMSKVEFVP 261
R +RL VT+T +G Q KMSKVEFVP
Sbjct 279 RKFRLIVTITRDGDQLKMSKVEFVP 303
>gi|333992917|ref|YP_004525531.1| hypothetical protein JDM601_4277 [Mycobacterium sp. JDM601]
gi|333488885|gb|AEF38277.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=228
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/154 (53%), Positives = 102/154 (67%), Gaps = 0/154 (0%)
Query 108 AMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVA 167
A A VV C LS +V QH A Q+ A F A A+Q V+ + S+D+N A+ V
Sbjct 75 AAVAVVVCSCALLVLSALMVQQHRRAQADQRHRAEFVAVARQVVVTLMSIDYNDAEGSVQ 134
Query 168 RVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVT 227
R++++STG FR +FQ A DF KV + +KV T+ TVNA AVESM SAVVLVAA+S V+
Sbjct 135 RIVNNSTGPFRTEFQGAADDFVKVSKDAKVTTKATVNAAAVESMTPDSAVVLVAASSTVS 194
Query 228 NSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
N+AGA+D PR WRL V + EG Q KMSKVEFVP
Sbjct 195 NAAGAEDAPRRWRLTVDLQREGDQIKMSKVEFVP 228
>gi|333992103|ref|YP_004524717.1| hypothetical protein JDM601_3463 [Mycobacterium sp. JDM601]
gi|333488071|gb|AEF37463.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=264
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/166 (45%), Positives = 109/166 (66%), Gaps = 1/166 (0%)
Query 94 RRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVIN 153
R+ + +R +L +A AV+ I GF + ++ H + RQ + +AA A+QGV+
Sbjct 98 RKSIGIRR-QLGWVAATLAVLAIGGFLAVDVLMLSHHRDVALRQHQLGEYAAAARQGVVT 156
Query 154 MTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNE 213
+ SL++ +DV ++D+STGEF+ DF+ A DF KV +SK VT + VESM++
Sbjct 157 LMSLNYETVDDDVKAILDNSTGEFKKDFEAHAGDFAKVARESKTVTSVDTVVSGVESMSD 216
Query 214 HSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEF 259
+ AVVLVAAT++VTN+AGAK+EPR+WRL V + EG Q KMSKV+F
Sbjct 217 NEAVVLVAATTKVTNTAGAKEEPRSWRLTVHLAREGDQVKMSKVDF 262
>gi|126432888|ref|YP_001068579.1| hypothetical protein Mjls_0275 [Mycobacterium sp. JLS]
gi|126232688|gb|ABN96088.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=209
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/167 (49%), Positives = 109/167 (66%), Gaps = 0/167 (0%)
Query 95 RRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINM 154
+R R+R P ST+ AV + SGY+ W H EA RQQ++A F A A+Q I +
Sbjct 43 KRRRLRRPGWSTVVAVLAVFVTAASLAASGYVTWHHREAMHRQQQSAEFEAAARQIAITL 102
Query 155 TSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEH 214
S+D KA+E V +++DSSTG+F ++F+ + DF K+ + KVVT+ V A AVESM E
Sbjct 103 MSIDAAKAEESVKQILDSSTGQFHEEFKSASEDFVKLTQDGKVVTDVKVKAAAVESMTED 162
Query 215 SAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
SA VLV TS VTN+AGA +PRAWRL V + + G+ KMSK+EFVP
Sbjct 163 SATVLVTTTSTVTNAAGADKQPRAWRLSVDIVRDAGRLKMSKMEFVP 209
>gi|108797264|ref|YP_637461.1| hypothetical protein Mmcs_0284 [Mycobacterium sp. MCS]
gi|119866349|ref|YP_936301.1| hypothetical protein Mkms_0294 [Mycobacterium sp. KMS]
gi|108767683|gb|ABG06405.1| putative membrane protein [Mycobacterium sp. MCS]
gi|119692438|gb|ABL89511.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=209
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/167 (49%), Positives = 109/167 (66%), Gaps = 0/167 (0%)
Query 95 RRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINM 154
+R R+R P ST+ AV + SGY+ W H EA RQQ++A F A A+Q I +
Sbjct 43 KRRRLRRPGWSTVVAVLAVFVTAASLAASGYVTWHHREAMHRQQQSAEFEAAARQIAITL 102
Query 155 TSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEH 214
S+D KA+E V +++DSSTG+F ++F+ + DF K+ + KVVT+ V A AVESM E
Sbjct 103 MSIDAAKAEESVKQILDSSTGQFHEEFKSASEDFVKLTQDGKVVTDVKVKAAAVESMTED 162
Query 215 SAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
SA VLV TS VTN+AGA +PRAWRL V + + G+ KMSK+EFVP
Sbjct 163 SATVLVTTTSTVTNAAGADKQPRAWRLSVDIVRDVGRLKMSKMEFVP 209
>gi|342861410|ref|ZP_08718058.1| hypothetical protein MCOL_21101 [Mycobacterium colombiense CECT
3035]
gi|342131310|gb|EGT84591.1| hypothetical protein MCOL_21101 [Mycobacterium colombiense CECT
3035]
Length=240
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/139 (49%), Positives = 102/139 (74%), Gaps = 0/139 (0%)
Query 123 SGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQ 182
S +V + +QQ AA F A A+Q V+ + S++ AK+DV R+IDS+TG+F+D+FQ
Sbjct 102 SAMMVRHQRDLVRKQQDAAEFTAAARQVVVTLMSINAASAKDDVQRIIDSTTGQFKDEFQ 161
Query 183 QRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLK 242
+ A DFTKV + +KV T+ +V ATAVES++ +AVVLVAA+S +TN+AGA ++PR+WRL
Sbjct 162 RAAEDFTKVAQNAKVSTKTSVQATAVESISHDTAVVLVAASSTLTNAAGATEQPRSWRLS 221
Query 243 VTVTEEGGQYKMSKVEFVP 261
+ + +GG+ KMS +EF+P
Sbjct 222 LKLARDGGKIKMSSMEFIP 240
>gi|296169587|ref|ZP_06851207.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895853|gb|EFG75548.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=199
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/156 (44%), Positives = 100/156 (65%), Gaps = 0/156 (0%)
Query 106 TIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKED 165
T+A+ AAVV++C G SGY+V H A ++QRAA F A A+Q V+ + S+D +A++D
Sbjct 44 TLALGAAVVLMCIALGASGYVVQYHRTAVAQRQRAAEFVAAARQDVVFLMSIDAGRARDD 103
Query 166 VARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSR 225
V R+ID +TG + A D K VEQS+V T+ V A AVESM + SA VLVAA +
Sbjct 104 VQRIIDDATGPLKAGLLLEAEDLVKAVEQSRVSTKVDVKAVAVESMTDDSATVLVAAKAE 163
Query 226 VTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
V N +K PR+WR+ T+ +G ++K+S+ + +P
Sbjct 164 VVNPDKSKPPPRSWRVIATIQRDGDRFKLSRADLLP 199
>gi|183984670|ref|YP_001852961.1| hypothetical protein MMAR_4702 [Mycobacterium marinum M]
gi|183177996|gb|ACC43106.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=244
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/155 (49%), Positives = 103/155 (67%), Gaps = 0/155 (0%)
Query 107 IAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDV 166
+A A A+VIIC SG+++W HH A +++RAAA++A A+ V+ M S+D +KA++DV
Sbjct 90 LAAAGALVIICASLSASGFLLWHHHNAVAQRERAAAYSAAARNAVLTMMSIDSSKARDDV 149
Query 167 ARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRV 226
R +DS+TG F+ A DF K VEQSKV +G V A AVESM + SA+VL+AA S +
Sbjct 150 QRFVDSTTGIFKAGILMSAEDFVKAVEQSKVHIKGAVQAVAVESMTDDSAIVLIAAKSDI 209
Query 227 TNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
K E R+WR+ V V +G Q K+SKVEFVP
Sbjct 210 VKPDQTKPETRSWRIVVNVERDGTQLKISKVEFVP 244
>gi|315443159|ref|YP_004076038.1| protein conserved in bacteria (DUF2133) [Mycobacterium sp. Spyr1]
gi|315261462|gb|ADT98203.1| Uncharacterized protein conserved in bacteria (DUF2133) [Mycobacterium
sp. Spyr1]
Length=218
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 103/155 (67%), Gaps = 0/155 (0%)
Query 107 IAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDV 166
+A+ A +V + GL+G++ +Q +E+ ++R F +QG +N+T++++ A+ DV
Sbjct 64 LALIAGLVAVLALAGLAGWLGYQTYESHRAEERRNLFVQVGRQGALNLTTINWESAEADV 123
Query 167 ARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRV 226
R++DS+TG F DDFQQRA F +VV+Q++ +EG++ +ES + VLVA T R
Sbjct 124 QRILDSATGTFYDDFQQRAEPFVQVVKQAQSKSEGSIAEAGLESATDTGGQVLVAVTVRT 183
Query 227 TNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
TN+ A+ +PRAWR++++V E G+ K+S VEFVP
Sbjct 184 TNAGSAEQQPRAWRMRISVQEIDGEAKVSNVEFVP 218
>gi|145222695|ref|YP_001133373.1| hypothetical protein Mflv_2107 [Mycobacterium gilvum PYR-GCK]
gi|145215181|gb|ABP44585.1| hypothetical protein Mflv_2107 [Mycobacterium gilvum PYR-GCK]
Length=225
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/155 (40%), Positives = 102/155 (66%), Gaps = 0/155 (0%)
Query 107 IAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDV 166
+A+ A +V + GL+G++ +Q +E+ + +++ F +QG +N+T++++ A+ DV
Sbjct 71 LALIAGLVGVLALAGLAGWLGYQTYESHQAEEQRNLFVQVGRQGALNLTTINWESAEADV 130
Query 167 ARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRV 226
R++DS+TG F DDFQQRA F +VV+Q++ +EGT+ +ES + VLVA T R
Sbjct 131 QRILDSATGTFYDDFQQRAEPFVQVVKQAQSKSEGTIAEAGLESATDSEGQVLVAVTVRT 190
Query 227 TNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
TN+ + +PRAWR++++V E G K+S VEFVP
Sbjct 191 TNAGTPEQQPRAWRMRISVQEIDGDAKVSNVEFVP 225
>gi|15840821|ref|NP_335858.1| hypothetical protein MT1409 [Mycobacterium tuberculosis CDC1551]
gi|13881018|gb|AAK45672.1| hypothetical protein MT1409 [Mycobacterium tuberculosis CDC1551]
Length=74
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)
Query 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN
Sbjct 1 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREALAMAPAEDEN 60
Query 61 VPEEYADWEDAED 73
VPEEYADWEDAED
Sbjct 61 VPEEYADWEDAED 73
>gi|118464562|ref|YP_880216.1| hypothetical protein MAV_0956 [Mycobacterium avium 104]
gi|118165849|gb|ABK66746.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=247
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/162 (42%), Positives = 98/162 (61%), Gaps = 0/162 (0%)
Query 99 VRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLD 158
+RLP IA A +++ G SGY+VWQH A +Q + +AA A+Q V+ + SL+
Sbjct 85 LRLPGRRAIAAGAGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAARQDVVLLMSLN 144
Query 159 FNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVV 218
A+ED+ RVID+ TG+ + + + + E+SK ++ TV A VESM+ SAVV
Sbjct 145 AQHAREDIQRVIDACTGDLKKQLEATSGLMLQKAEESKASSKATVEAVGVESMSHDSAVV 204
Query 219 LVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFV 260
LVAA + VTN+ P WR+ V +T +GGQ KMSKV+F+
Sbjct 205 LVAAKTDVTNADNTNRPPVVWRISVGLTRDGGQLKMSKVDFL 246
>gi|254773845|ref|ZP_05215361.1| hypothetical protein MaviaA2_04092 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=246
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/160 (42%), Positives = 96/160 (60%), Gaps = 0/160 (0%)
Query 101 LPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFN 160
LP IA A +++ G SGY+VWQH A +Q + +AA A+Q V+ + SL+
Sbjct 86 LPGRRAIAAGAGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAARQDVVLLMSLNAQ 145
Query 161 KAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLV 220
A+ED+ RVID+ TG+ + + + + E+SK ++ TV A VESM+ SAVVLV
Sbjct 146 HAREDIQRVIDACTGDLKKQLEATSGLMLQKAEESKASSKATVEAVGVESMSHDSAVVLV 205
Query 221 AATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFV 260
AA + VTN+ P WR+ V +T +GGQ KMSKV+F+
Sbjct 206 AAKTDVTNADNTNRPPVVWRISVGLTRDGGQLKMSKVDFL 245
>gi|336461213|gb|EGO40089.1| hypothetical protein MAPs_32980 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=253
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/160 (42%), Positives = 96/160 (60%), Gaps = 0/160 (0%)
Query 101 LPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFN 160
LP IA A +++ G SGY+VWQH A +Q + +AA A+Q V+ + SL+
Sbjct 93 LPGRRAIAAGAGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAARQDVVLLMSLNAQ 152
Query 161 KAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLV 220
A+ED+ RVID+ TG+ + + + + E+SK ++ TV A VESM+ SAVVLV
Sbjct 153 HAREDIQRVIDACTGDLKKQLEATSGLMLQKAEESKASSKATVEAVGVESMSHDSAVVLV 212
Query 221 AATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFV 260
AA + VTN+ P WR+ V +T +GGQ KMSKV+F+
Sbjct 213 AAKTDVTNADNTNRPPVVWRISVGLTRDGGQLKMSKVDFL 252
>gi|41406866|ref|NP_959702.1| hypothetical protein MAP0768c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395216|gb|AAS03085.1| hypothetical protein MAP_0768c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=298
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/160 (42%), Positives = 96/160 (60%), Gaps = 0/160 (0%)
Query 101 LPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFN 160
LP IA A +++ G SGY+VWQH A +Q + +AA A+Q V+ + SL+
Sbjct 138 LPGRRAIAAGAGILLASASLGASGYMVWQHRVAAHNRQLSDEYAAAARQDVVLLMSLNAQ 197
Query 161 KAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLV 220
A+ED+ RVID+ TG+ + + + + E+SK ++ TV A VESM+ SAVVLV
Sbjct 198 HAREDIQRVIDACTGDLKKQLEATSGLMLQKAEESKASSKATVEAVGVESMSHDSAVVLV 257
Query 221 AATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFV 260
AA + VTN+ P WR+ V +T +GGQ KMSKV+F+
Sbjct 258 AAKTDVTNADNTNRPPVVWRISVGLTRDGGQLKMSKVDFL 297
>gi|226361011|ref|YP_002778789.1| hypothetical protein ROP_15970 [Rhodococcus opacus B4]
gi|226239496|dbj|BAH49844.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=189
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/161 (40%), Positives = 99/161 (62%), Gaps = 2/161 (1%)
Query 102 PRLSTIAMAAAV--VIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDF 159
PR + A+ V+ F +SGY + H +A + Q+ + A+QGV+N+T++DF
Sbjct 28 PRTPAVTAGVAILSVLALAFLAVSGYFGYTHRQAEQEAQQRSEIVDAARQGVVNLTTMDF 87
Query 160 NKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVL 219
+A EDV +V+D S GEFRD+F+ R+ D V+++++V + G V A+E + SA VL
Sbjct 88 ERADEDVQKVLDGSAGEFRDEFEARSKDLIAVMQEARVKSVGEVRQAAIERQDGDSADVL 147
Query 220 VAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFV 260
VA +V+N+ GA +EPR R++VT+ E G YK+ K FV
Sbjct 148 VAVAQKVSNAGGAAEEPRGQRMRVTMQLEDGTYKIVKAGFV 188
>gi|120405550|ref|YP_955379.1| hypothetical protein Mvan_4598 [Mycobacterium vanbaalenii PYR-1]
gi|119958368|gb|ABM15373.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=244
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/155 (40%), Positives = 99/155 (64%), Gaps = 0/155 (0%)
Query 107 IAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDV 166
+A+ A +V + GL+ ++ ++ +EA + R F +QG +N+T++D+ A+ DV
Sbjct 90 VALIAGLVGVLALAGLTAWMGYRTYEANRDEHRRELFLQVGRQGALNLTTIDWQNAEADV 149
Query 167 ARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRV 226
R++DS+TG F DDFQQRA F +VV+Q++ + GTV +ES + A VLVA T +
Sbjct 150 QRILDSATGTFYDDFQQRAQPFVEVVKQAQSKSVGTVAEAGLESAGANEAQVLVAVTVKT 209
Query 227 TNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
+N+ + EPRAWR++++V + G K+S VEFVP
Sbjct 210 SNAGAPEQEPRAWRMRISVEKIGDDAKVSNVEFVP 244
>gi|111018911|ref|YP_701883.1| hypothetical protein RHA1_ro01914 [Rhodococcus jostii RHA1]
gi|110818441|gb|ABG93725.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=175
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/138 (43%), Positives = 93/138 (68%), Gaps = 0/138 (0%)
Query 123 SGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQ 182
SGY + H +A + Q+ + A+QGV+N+T++D+ +A EDV +V+D STGEFRD+F+
Sbjct 37 SGYFGYTHRQAEQEAQQRSEILEAARQGVVNLTTMDYERADEDVQKVLDGSTGEFRDEFE 96
Query 183 QRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLK 242
R+ D V++++KV ++G V A+E+ N +A VLVA +V+N+ GA +EPR R++
Sbjct 97 ARSKDLIAVMQEAKVKSQGEVRQAAIETQNGDAADVLVAVAQKVSNAGGAAEEPRGQRMR 156
Query 243 VTVTEEGGQYKMSKVEFV 260
VT+ E G YK+ K FV
Sbjct 157 VTMQLEDGTYKIVKAGFV 174
>gi|126436736|ref|YP_001072427.1| hypothetical protein Mjls_4164 [Mycobacterium sp. JLS]
gi|126236536|gb|ABN99936.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=202
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/159 (41%), Positives = 103/159 (65%), Gaps = 3/159 (1%)
Query 103 RLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKA 162
RL+ +A + V+++ +G GY +Q HEA ++Q+R F A+QG +N+T++D+ A
Sbjct 47 RLALVAGLSLVIVLGALSGWLGYQAYQSHEA-DKQRRE--FVQVARQGALNLTTIDYEHA 103
Query 163 KEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAA 222
DV R+++S+TG+F DDF QR+ F VV+Q++ + GT+ A+ES + A V+VA
Sbjct 104 DTDVQRILESATGQFHDDFAQRSQPFLDVVKQAQSKSVGTITEAALESESGDEAQVIVAV 163
Query 223 TSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
T + +N A+ EPRAWR+++TV + G K+S V FVP
Sbjct 164 TVKTSNVGAAEQEPRAWRMRLTVQKVGEDMKVSNVGFVP 202
>gi|120403843|ref|YP_953672.1| hypothetical protein Mvan_2860 [Mycobacterium vanbaalenii PYR-1]
gi|119956661|gb|ABM13666.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=225
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/153 (43%), Positives = 92/153 (61%), Gaps = 2/153 (1%)
Query 110 AAAVVIICG--FTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVA 167
A V ++C SG I++ H A QQ A FAA KQ + + S+DFN + V
Sbjct 72 AGVVAVLCSVAMVAASGLILFGHRNAVRDQQNRAEFAAAGKQVAVTLMSIDFNDPQAGVQ 131
Query 168 RVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVT 227
R+ID+S FR +FQ ++DF K+ +KV T+ T N AV+S SAVVLVAATS VT
Sbjct 132 RIIDNSVDPFRAEFQSSSSDFAKLSADAKVTTKATANVAAVQSATADSAVVLVAATSTVT 191
Query 228 NSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFV 260
N+ G + PR+W+L+V + + + KMSKV+F+
Sbjct 192 NADGVAEPPRSWQLRVELQRDADRIKMSKVDFL 224
>gi|145221245|ref|YP_001131923.1| hypothetical protein Mflv_0646 [Mycobacterium gilvum PYR-GCK]
gi|145213731|gb|ABP43135.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=221
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/188 (38%), Positives = 109/188 (58%), Gaps = 7/188 (3%)
Query 76 DYDDYEAADQEAARSAS--WRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEA 133
D +D E D + R S WR R+ + RL+ + + A V + T G+ Q H+A
Sbjct 39 DSEDPEVVDGKHQRDTSRAWRNRMPPQ--RLALVMGSVAAVTMGALTSWLGFQTHQAHQA 96
Query 134 TERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVE 193
+E++Q+ F +QG +N+T++D+ A DV R++DS+TG F D+F QR+ F VV
Sbjct 97 SEQRQQ---FVQVGRQGALNLTTIDWQHADVDVKRILDSATGTFYDEFSQRSQPFIDVVN 153
Query 194 QSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYK 253
+ K + GT+ +ES + +A VLVA + + T G + EPRAWR++VTV + G K
Sbjct 154 KVKSKSVGTITEAGLESHSRDTAQVLVAVSVKTTVGDGPEQEPRAWRMRVTVQKVGNDAK 213
Query 254 MSKVEFVP 261
++ VEFVP
Sbjct 214 VADVEFVP 221
>gi|240173061|ref|ZP_04751719.1| hypothetical protein MkanA1_27361 [Mycobacterium kansasii ATCC
12478]
Length=257
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/167 (49%), Positives = 104/167 (63%), Gaps = 9/167 (5%)
Query 103 RLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKA 162
R AMAAAVV CG G SGY+VW H +QQRAA FAA A+QG I + S+D KA
Sbjct 92 RTGLAAMAAAVVG-CGSLGASGYLVWHHRTVAHQQQRAAEFAAAARQGAITLMSIDATKA 150
Query 163 KEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAA 222
+EDV R+IDS+TG F+ A D + VEQS+V T+ TV AV+SM + SAVVLVAA
Sbjct 151 REDVQRIIDSTTGAFKGGMLIAADDLVQSVEQSRVSTKATVQGVAVQSMTDDSAVVLVAA 210
Query 223 TSRV--------TNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
+ V NS PR+WR+ +T+ +GGQ K++KVE +P
Sbjct 211 RAEVANPEANPGPNSGKETLAPRSWRIVMTLQRDGGQLKVAKVEALP 257
>gi|118462309|ref|YP_881188.1| hypothetical protein MAV_1969 [Mycobacterium avium 104]
gi|118163596|gb|ABK64493.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=148
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/149 (41%), Positives = 96/149 (65%), Gaps = 3/149 (2%)
Query 113 VVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDS 172
VV++ G TG Y +Q H+A E++ F +QG +N+T++D+ A +DV R++DS
Sbjct 3 VVVLGGLTGWLAYRGYQSHQADEQRN---MFVQVGRQGALNLTTIDWQHADKDVQRILDS 59
Query 173 STGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGA 232
+TG F DDFQ+R+ F +VV++++ +EG V +ES E+ VLVA T +N+
Sbjct 60 ATGTFYDDFQKRSGPFIEVVKKAQSKSEGKVTEAGLESRTENEGQVLVAVTVNTSNAGAP 119
Query 233 KDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
+ EPR+WR+++TV + + K+SKVEFVP
Sbjct 120 EQEPRSWRMRITVQKVNEEAKVSKVEFVP 148
>gi|108798629|ref|YP_638826.1| hypothetical protein Mmcs_1660 [Mycobacterium sp. MCS]
gi|119867725|ref|YP_937677.1| hypothetical protein Mkms_1684 [Mycobacterium sp. KMS]
gi|126434226|ref|YP_001069917.1| hypothetical protein Mjls_1633 [Mycobacterium sp. JLS]
gi|108769048|gb|ABG07770.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693814|gb|ABL90887.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126234026|gb|ABN97426.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=221
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/187 (37%), Positives = 108/187 (58%), Gaps = 7/187 (3%)
Query 76 DYDDYEAADQEAARSAS--WRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEA 133
D +D E D + R S WR R+ + RL+ + + A V + T G+ Q H+A
Sbjct 39 DSEDTEVVDGKHQRDTSRAWRNRMPPQ--RLALVMGSVAAVTMGALTSWLGFQTHQAHQA 96
Query 134 TERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVE 193
+E++Q+ F +QG +N+T++D+ A DV R++DS+TG F D+F QR+ F VV
Sbjct 97 SEQRQQ---FVQVGRQGALNLTTIDWQHADVDVKRILDSATGTFYDEFSQRSQPFIDVVN 153
Query 194 QSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYK 253
+ K + GT+ +ES + +A VLVA + + T G + EPRAWR++VTV + G K
Sbjct 154 KVKSKSVGTITEAGLESHSRDTAQVLVAVSVKTTVGDGPEQEPRAWRMRVTVQKVGNDAK 213
Query 254 MSKVEFV 260
++ VEFV
Sbjct 214 VADVEFV 220
>gi|315441860|ref|YP_004074739.1| hypothetical protein Mspyr1_01780 [Mycobacterium sp. Spyr1]
gi|315260163|gb|ADT96904.1| hypothetical protein Mspyr1_01780 [Mycobacterium sp. Spyr1]
Length=221
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/187 (37%), Positives = 108/187 (58%), Gaps = 7/187 (3%)
Query 76 DYDDYEAADQEAARSAS--WRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEA 133
D +D E D + R S WR R+ + RL+ + + A V + T G+ Q H+A
Sbjct 39 DSEDPEVVDGKHQRDTSRAWRNRMPPQ--RLALVMGSVAAVTMGALTSWLGFQTHQAHQA 96
Query 134 TERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVE 193
+E++Q+ F +QG +N+T++D+ A DV R++DS+TG F D+F QR+ F VV
Sbjct 97 SEQRQQ---FVQVGRQGALNLTTIDWQHADVDVKRILDSATGTFYDEFSQRSQPFIDVVN 153
Query 194 QSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYK 253
+ K + GT+ +ES + +A VLVA + + T G + EPRAWR++VTV + G K
Sbjct 154 KVKSKSVGTITEAGLESHSRDTAQVLVAVSVKTTVGDGPEQEPRAWRMRVTVQKVGNDAK 213
Query 254 MSKVEFV 260
++ VEFV
Sbjct 214 VADVEFV 220
>gi|120401540|ref|YP_951369.1| hypothetical protein Mvan_0519 [Mycobacterium vanbaalenii PYR-1]
gi|119954358|gb|ABM11363.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=221
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/187 (37%), Positives = 108/187 (58%), Gaps = 7/187 (3%)
Query 76 DYDDYEAADQEAARSAS--WRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEA 133
D +D E D + R S WR R+ + RL+ + + A V + T G+ Q H+A
Sbjct 39 DSEDPEVVDGKHQRDTSRAWRNRMPPQ--RLALVMGSVAAVTMGALTSWLGFQTHQAHQA 96
Query 134 TERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVE 193
+E++Q+ F +QG +N+T++D+ A DV R++DS+TG F D+F QR+ F VV
Sbjct 97 SEQRQQ---FVQVGRQGALNLTTIDWQHADVDVKRILDSATGTFYDEFSQRSQPFIDVVN 153
Query 194 QSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYK 253
+ K + GT+ +ES + +A VLVA + + T G + EPRAWR++VTV + G K
Sbjct 154 KVKSKSVGTITEAGLESHSRDTAQVLVAVSVKTTVGDGPEQEPRAWRMRVTVQKVGNDAK 213
Query 254 MSKVEFV 260
++ VEFV
Sbjct 214 VADVEFV 220
>gi|342860440|ref|ZP_08717091.1| hypothetical protein MCOL_16236 [Mycobacterium colombiense CECT
3035]
gi|342132095|gb|EGT85336.1| hypothetical protein MCOL_16236 [Mycobacterium colombiense CECT
3035]
Length=263
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/168 (39%), Positives = 96/168 (58%), Gaps = 5/168 (2%)
Query 93 WRRRLRVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVI 152
W RR P+ T+A A V+ G +GY++WQHH A +Q AA F+ A+QG+
Sbjct 100 WLRR-----PQRKTVAGVVATVLFAGSLAGTGYMLWQHHIAVHNRQLAAEFSTAARQGIT 154
Query 153 NMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMN 212
S+D AKEDV R ID+STG+ ++ + E++KV T+ T+ A AVES+
Sbjct 155 AFMSIDPAHAKEDVQRAIDASTGDQKNQLAVLSTLIVNKAEETKVGTKVTIEAVAVESLT 214
Query 213 EHSAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFV 260
++S VVLVAA + K P +R+ V + +GGQ KMSK++F+
Sbjct 215 DNSGVVLVAAKTDPFGPDNLKPPPALFRVSVNMDRDGGQLKMSKIDFL 262
>gi|254819944|ref|ZP_05224945.1| hypothetical protein MintA_08466 [Mycobacterium intracellulare
ATCC 13950]
Length=243
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/214 (35%), Positives = 115/214 (54%), Gaps = 10/214 (4%)
Query 49 EALAMAPAEDENVPEEYADWEDAEDYD-DYDDYEAADQEAARSASWRRRLRVRLPRLSTI 107
E A APA D P A ++ EDYD DD D E A ++R P L +
Sbjct 39 ETTAEAPASDN--PTVEAPDDEVEDYDASVDDAAEPDAEDPVPAK-----KLRSPAL--L 89
Query 108 AMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQGVINMTSLDFNKAKEDVA 167
A +V + G L G+ +Q +++ + QQ+ +QG +N+T++D+ A DV
Sbjct 90 ATVFGLVTVVGLAALGGWFGYQTYQSHQAQQQRELMVRIGRQGALNLTTIDWQHADADVQ 149
Query 168 RVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTEGTVNATAVESMNEHSAVVLVAATSRVT 227
R++DS+TG F DDF R+ F VV++++ + GT+ +ES + + A VLVA + + +
Sbjct 150 RILDSATGTFYDDFSHRSKPFIDVVKKAQSKSVGTITEAGLESQSGNEAQVLVAVSVKTS 209
Query 228 NSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP 261
N A+ +PR WR++V V + G K+S V FVP
Sbjct 210 NLGAAEQDPRHWRMRVIVQKVGNDMKVSNVAFVP 243
Lambda K H
0.312 0.122 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 388543189928
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40