BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           21,062,489 sequences; 7,218,481,314 total letters



Query= Rv1366A Rv1366A Conserved protein 1539180:1539440 forward MW:9773

Length=86
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15840825|ref|NP_335862.1|  hypothetical protein MT1413 [Mycoba...   175    2e-42
gi|167969118|ref|ZP_02551395.1|  hypothetical protein MtubH3_1423...   157    6e-37
gi|345462042|ref|YP_004837053.1|  hypothetical protein Rv4011 [My...   125    2e-27
gi|269796647|ref|YP_003316102.1|  hypothetical protein Sked_33740...  71.2    7e-11
gi|225020777|ref|ZP_03709969.1|  hypothetical protein CORMATOL_00...  58.9    4e-07
gi|269956330|ref|YP_003326119.1|  hypothetical protein Xcel_1531 ...  57.8    8e-07
gi|305679707|ref|ZP_07402517.1|  conserved hypothetical protein [...  57.4    1e-06
gi|227542911|ref|ZP_03972960.1|  hypothetical protein HMPREF0293_...  55.8    3e-06
gi|300780487|ref|ZP_07090343.1|  conserved hypothetical protein [...  55.8    3e-06
gi|227488297|ref|ZP_03918613.1|  hypothetical protein HMPREF0294_...  55.8    3e-06
gi|357590224|ref|ZP_09128890.1|  hypothetical protein CnurS_08497...  54.7    7e-06
gi|337290289|ref|YP_004629310.1|  hypothetical protein CULC22_006...  54.3    8e-06
gi|227833586|ref|YP_002835293.1|  hypothetical protein cauri_1762...  53.9    1e-05
gi|384515209|ref|YP_005710301.1|  hypothetical protein CULC809_00...  53.5    1e-05
gi|262184578|ref|ZP_06043999.1|  hypothetical protein CaurA7_1133...  52.8    3e-05
gi|397653532|ref|YP_006494215.1|  hypothetical protein CULC0102_0...  52.0    4e-05
gi|262183712|ref|ZP_06043133.1|  hypothetical protein CaurA7_0696...  46.2    0.002
gi|227488313|ref|ZP_03918629.1|  hypothetical protein HMPREF0294_...  45.1    0.005
gi|354566263|ref|ZP_08985436.1|  peptidase S41 [Fischerella sp. J...  35.4    4.3  


>gi|15840825|ref|NP_335862.1| hypothetical protein MT1413 [Mycobacterium tuberculosis CDC1551]
 gi|148661157|ref|YP_001282680.1| hypothetical protein MRA_1376 [Mycobacterium tuberculosis H37Ra]
 gi|253799583|ref|YP_003032584.1| hypothetical protein TBMG_04066 [Mycobacterium tuberculosis KZN 
1435]
 20 more sequence titles
 
gi|289442811|ref|ZP_06432555.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289446963|ref|ZP_06436707.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289569382|ref|ZP_06449609.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289574034|ref|ZP_06454261.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|308373122|ref|ZP_07667514.1| hypothetical protein TMEG_01271 [Mycobacterium tuberculosis SUMu005]
 gi|308375443|ref|ZP_07443936.2| hypothetical protein TMGG_01939 [Mycobacterium tuberculosis SUMu007]
 gi|308377708|ref|ZP_07480127.2| hypothetical protein TMIG_03051 [Mycobacterium tuberculosis SUMu009]
 gi|392433035|ref|YP_006474079.1| hypothetical protein TBXG_004013 [Mycobacterium tuberculosis 
KZN 605]
 gi|13881022|gb|AAK45676.1| hypothetical protein MT1413 [Mycobacterium tuberculosis CDC1551]
 gi|148505309|gb|ABQ73118.1| hypothetical protein MRA_1376 [Mycobacterium tuberculosis H37Ra]
 gi|253321086|gb|ACT25689.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289415730|gb|EFD12970.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289419921|gb|EFD17122.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289538465|gb|EFD43043.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289543136|gb|EFD46784.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|308338753|gb|EFP27604.1| hypothetical protein TMEG_01271 [Mycobacterium tuberculosis SUMu005]
 gi|308346292|gb|EFP35143.1| hypothetical protein TMGG_01939 [Mycobacterium tuberculosis SUMu007]
 gi|308354863|gb|EFP43714.1| hypothetical protein TMIG_03051 [Mycobacterium tuberculosis SUMu009]
 gi|379027592|dbj|BAL65325.1| hypothetical protein ERDMAN_1527 [Mycobacterium tuberculosis 
str. Erdman = ATCC 35801]
 gi|392054444|gb|AFM50002.1| hypothetical protein TBXG_004013 [Mycobacterium tuberculosis 
KZN 605]
Length=86

 Score =  175 bits (444),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 86/86 (100%), Positives = 86/86 (100%), Gaps = 0/86 (0%)

Query  1   MRPSRQGEVGEVAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVS  60
           MRPSRQGEVGEVAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVS
Sbjct  1   MRPSRQGEVGEVAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVS  60

Query  61  KSLGTLKQTHSRYFTGEELNVGNGAR  86
           KSLGTLKQTHSRYFTGEELNVGNGAR
Sbjct  61  KSLGTLKQTHSRYFTGEELNVGNGAR  86


>gi|167969118|ref|ZP_02551395.1| hypothetical protein MtubH3_14238 [Mycobacterium tuberculosis 
H37Ra]
 gi|254231618|ref|ZP_04924945.1| hypothetical protein TBCG_01349 [Mycobacterium tuberculosis C]
 gi|254550382|ref|ZP_05140829.1| hypothetical protein Mtube_07965 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 13 more sequence titles
 
gi|294994926|ref|ZP_06800617.1| hypothetical protein Mtub2_10555 [Mycobacterium tuberculosis 
210]
 gi|297633922|ref|ZP_06951702.1| hypothetical protein MtubK4_07360 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297730911|ref|ZP_06960029.1| hypothetical protein MtubKR_07460 [Mycobacterium tuberculosis 
KZN R506]
 gi|307083933|ref|ZP_07493046.1| hypothetical protein TMLG_03461 [Mycobacterium tuberculosis SUMu012]
 gi|313658244|ref|ZP_07815124.1| hypothetical protein MtubKV_07480 [Mycobacterium tuberculosis 
KZN V2475]
 gi|383307237|ref|YP_005360048.1| hypothetical protein MRGA327_08580 [Mycobacterium tuberculosis 
RGTB327]
 gi|386004354|ref|YP_005922633.1| hypothetical protein MRGA423_08560 [Mycobacterium tuberculosis 
RGTB423]
 gi|124600677|gb|EAY59687.1| hypothetical protein TBCG_01349 [Mycobacterium tuberculosis C]
 gi|308366421|gb|EFP55272.1| hypothetical protein TMLG_03461 [Mycobacterium tuberculosis SUMu012]
 gi|323720122|gb|EGB29226.1| hypothetical protein TMMG_02070 [Mycobacterium tuberculosis CDC1551A]
 gi|358231623|dbj|GAA45115.1| hypothetical protein NCGM2209_1736 [Mycobacterium tuberculosis 
NCGM2209]
 gi|380721190|gb|AFE16299.1| hypothetical protein MRGA327_08580 [Mycobacterium tuberculosis 
RGTB327]
 gi|380724842|gb|AFE12637.1| hypothetical protein MRGA423_08560 [Mycobacterium tuberculosis 
RGTB423]
Length=78

 Score =  157 bits (397),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 77/78 (99%), Positives = 78/78 (100%), Gaps = 0/78 (0%)

Query  9   VGEVAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQ  68
           +GEVAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQ
Sbjct  1   MGEVAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQ  60

Query  69  THSRYFTGEELNVGNGAR  86
           THSRYFTGEELNVGNGAR
Sbjct  61  THSRYFTGEELNVGNGAR  78


>gi|345462042|ref|YP_004837053.1| hypothetical protein Rv4011 [Mycobacterium tuberculosis H37Rv]
Length=62

 Score =  125 bits (315),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 61/62 (99%), Positives = 62/62 (100%), Gaps = 0/62 (0%)

Query  25  VRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHSRYFTGEELNVGNG  84
           +RRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHSRYFTGEELNVGNG
Sbjct  1   MRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHSRYFTGEELNVGNG  60

Query  85  AR  86
           AR
Sbjct  61  AR  62


>gi|269796647|ref|YP_003316102.1| hypothetical protein Sked_33740 [Sanguibacter keddieii DSM 10542]
 gi|269098832|gb|ACZ23268.1| hypothetical protein Sked_33740 [Sanguibacter keddieii DSM 10542]
Length=74

 Score = 71.2 bits (173),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 35/71 (50%), Positives = 52/71 (74%), Gaps = 3/71 (4%)

Query  12  VAGYVVEYNRRTHVRRITEFATP---QEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQ  68
           +A +++EYNRRT    +T+F +    ++A++ R + E  RTD++IEIV+LVS SL T+K+
Sbjct  1   MAAFLIEYNRRTSDWSVTQFLSDTGHRDAIKLRFERERVRTDADIEIVSLVSDSLETIKK  60

Query  69  THSRYFTGEEL  79
           THSRYF G EL
Sbjct  61  THSRYFAGREL  71


>gi|225020777|ref|ZP_03709969.1| hypothetical protein CORMATOL_00785 [Corynebacterium matruchotii 
ATCC 33806]
 gi|224946479|gb|EEG27688.1| hypothetical protein CORMATOL_00785 [Corynebacterium matruchotii 
ATCC 33806]
Length=66

 Score = 58.9 bits (141),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 24/63 (39%), Positives = 45/63 (72%), Gaps = 0/63 (0%)

Query  12  VAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHS  71
           + G++++Y+RR+    + EF +P++A++ R+ LE+  TD ++EIV +VS     L+++HS
Sbjct  1   MPGFLLQYHRRSGEVHVEEFDSPKQAIQKRVALESTTTDDDVEIVVIVSPDEQMLRKSHS  60

Query  72  RYF  74
           RYF
Sbjct  61  RYF  63


>gi|269956330|ref|YP_003326119.1| hypothetical protein Xcel_1531 [Xylanimonas cellulosilytica DSM 
15894]
 gi|269305011|gb|ACZ30561.1| hypothetical protein Xcel_1531 [Xylanimonas cellulosilytica DSM 
15894]
Length=70

 Score = 57.8 bits (138),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 35/66 (54%), Positives = 47/66 (72%), Gaps = 0/66 (0%)

Query  12  VAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHS  71
           +  +VVEYNRRT    +TEFAT  E +  RL+LE  R + +IEIV+LVS S+ T+++THS
Sbjct  1   MPSFVVEYNRRTGAVHVTEFATSGEGVRRRLELERVRVNKDIEIVSLVSDSIETVRRTHS  60

Query  72  RYFTGE  77
           RYF  E
Sbjct  61  RYFARE  66


>gi|305679707|ref|ZP_07402517.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 
14266]
 gi|305660327|gb|EFM49824.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 
14266]
Length=66

 Score = 57.4 bits (137),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 23/63 (37%), Positives = 44/63 (70%), Gaps = 0/63 (0%)

Query  12  VAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHS  71
           + G++++Y+R++    + +F +P+ AM+ R+ LE+  TD ++EIV +VS     L+++HS
Sbjct  1   MPGFLLQYHRKSGEVHVEKFDSPKHAMQKRIALESTTTDDDVEIVVIVSPDEQMLRKSHS  60

Query  72  RYF  74
           RYF
Sbjct  61  RYF  63


>gi|227542911|ref|ZP_03972960.1| hypothetical protein HMPREF0293_2230 [Corynebacterium glucuronolyticum 
ATCC 51866]
 gi|227181314|gb|EEI62286.1| hypothetical protein HMPREF0293_2230 [Corynebacterium glucuronolyticum 
ATCC 51866]
Length=85

 Score = 55.8 bits (133),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 28/62 (46%), Positives = 41/62 (67%), Gaps = 1/62 (1%)

Query  14  GYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAE-RTDSNIEIVALVSKSLGTLKQTHSR  72
            +V+ YNR +   R++EF  P EA+  RL+ E E R D N E+V + ++SL  +K+THSR
Sbjct  3   DFVLIYNRISGALRLSEFDDPAEAVRVRLEREKEHRDDPNTEVVLITAESLDDIKKTHSR  62

Query  73  YF  74
           YF
Sbjct  63  YF  64


>gi|300780487|ref|ZP_07090343.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 
33030]
 gi|300534597|gb|EFK55656.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 
33030]
Length=78

 Score = 55.8 bits (133),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 25/65 (39%), Positives = 42/65 (65%), Gaps = 0/65 (0%)

Query  14  GYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHSRY  73
            Y++EY+R T    +T +    EA    ++LE ERTD ++E+V + S ++ TL+ TH+R+
Sbjct  3   AYLIEYHRPTGRLNLTPYEDAHEASRECIRLETERTDPDLELVVIRSDNIETLRSTHARF  62

Query  74  FTGEE  78
           F GE+
Sbjct  63  FMGED  67


>gi|227488297|ref|ZP_03918613.1| hypothetical protein HMPREF0294_1447 [Corynebacterium glucuronolyticum 
ATCC 51867]
 gi|227091741|gb|EEI27053.1| hypothetical protein HMPREF0294_1447 [Corynebacterium glucuronolyticum 
ATCC 51867]
Length=85

 Score = 55.8 bits (133),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 28/62 (46%), Positives = 41/62 (67%), Gaps = 1/62 (1%)

Query  14  GYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAE-RTDSNIEIVALVSKSLGTLKQTHSR  72
            +V+ YNR +   R++EF  P EA+  RL+ E E R D N E+V + ++SL  +K+THSR
Sbjct  3   DFVLIYNRISGALRLSEFDDPAEAVRVRLEREKEHRDDPNTEVVLITAESLDDIKKTHSR  62

Query  73  YF  74
           YF
Sbjct  63  YF  64


>gi|357590224|ref|ZP_09128890.1| hypothetical protein CnurS_08497 [Corynebacterium nuruki S6-4]
Length=82

 Score = 54.7 bits (130),  Expect = 7e-06, Method: Compositional matrix adjust.
 Identities = 25/63 (40%), Positives = 41/63 (66%), Gaps = 1/63 (1%)

Query  15  YVVEYNRRTHVRRITEFATPQEAMEHRLKLEAE-RTDSNIEIVALVSKSLGTLKQTHSRY  73
           YV+EY R      + EF  P+EA++ + +LE E R D ++E+  + +++L  +K+THSRY
Sbjct  8   YVMEYRRSNGALSVEEFGEPREAIQRQFELEDEHRGDDDVEVATISAENLDAVKRTHSRY  67

Query  74  FTG  76
           F G
Sbjct  68  FAG  70


>gi|337290289|ref|YP_004629310.1| hypothetical protein CULC22_00678 [Corynebacterium ulcerans BR-AD22]
 gi|334698595|gb|AEG83391.1| hypothetical protein CULC22_00678 [Corynebacterium ulcerans BR-AD22]
Length=66

 Score = 54.3 bits (129),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 25/65 (39%), Positives = 44/65 (68%), Gaps = 0/65 (0%)

Query  12  VAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHS  71
           ++ ++++Y RR+ V  I  F +  EA + RLKL+ E  D ++EIVA++ KS   ++++HS
Sbjct  1   MSSFLIKYQRRSGVLDIQAFDSFVEATKMRLKLDKENHDPDLEIVAVLGKSEEHIRKSHS  60

Query  72  RYFTG  76
           RYF+ 
Sbjct  61  RYFSA  65


>gi|227833586|ref|YP_002835293.1| hypothetical protein cauri_1762 [Corynebacterium aurimucosum 
ATCC 700975]
 gi|227454602|gb|ACP33355.1| hypothetical protein cauri_1762 [Corynebacterium aurimucosum 
ATCC 700975]
Length=88

 Score = 53.9 bits (128),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 25/65 (39%), Positives = 42/65 (65%), Gaps = 0/65 (0%)

Query  12  VAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHS  71
           V+ +++ Y RR+    I +F+   +A++ RL+ EA   D +IEI  + + SL +LK++HS
Sbjct  12  VSEFIIIYKRRSGESFIKQFSDSAQALKERLRREAAIDDPDIEIAHISAPSLESLKKSHS  71

Query  72  RYFTG  76
           RYF G
Sbjct  72  RYFMG  76


>gi|384515209|ref|YP_005710301.1| hypothetical protein CULC809_00671 [Corynebacterium ulcerans 
809]
 gi|334696410|gb|AEG81207.1| hypothetical protein CULC809_00671 [Corynebacterium ulcerans 
809]
Length=66

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 24/65 (37%), Positives = 44/65 (68%), Gaps = 0/65 (0%)

Query  12  VAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHS  71
           ++ ++++Y RR+ V  I  F +  EA + RLKL+ E  D ++EIVA++ ++   ++Q+HS
Sbjct  1   MSSFLIKYQRRSGVLDIQAFDSFVEATKMRLKLDKENDDPDLEIVAILGETEEHVRQSHS  60

Query  72  RYFTG  76
           RYF+ 
Sbjct  61  RYFSA  65


>gi|262184578|ref|ZP_06043999.1| hypothetical protein CaurA7_11338 [Corynebacterium aurimucosum 
ATCC 700975]
Length=77

 Score = 52.8 bits (125),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 24/62 (39%), Positives = 40/62 (65%), Gaps = 0/62 (0%)

Query  15  YVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHSRYF  74
           +++ Y RR+    I +F+   +A++ RL+ EA   D +IEI  + + SL +LK++HSRYF
Sbjct  4   FIIIYKRRSGESFIKQFSDSAQALKERLRREAAIDDPDIEIAHISAPSLESLKKSHSRYF  63

Query  75  TG  76
            G
Sbjct  64  MG  65


>gi|397653532|ref|YP_006494215.1| hypothetical protein CULC0102_0781 [Corynebacterium ulcerans 
0102]
 gi|393402488|dbj|BAM26980.1| hypothetical protein CULC0102_0781 [Corynebacterium ulcerans 
0102]
Length=66

 Score = 52.0 bits (123),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 24/65 (37%), Positives = 44/65 (68%), Gaps = 0/65 (0%)

Query  12  VAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHS  71
           ++ ++++Y RR+ V  I  F +  EA + RLKL+ E  D ++EIVA++ +S   ++++HS
Sbjct  1   MSSFLIKYQRRSGVLDIQAFDSFVEATKMRLKLDKENHDPDLEIVAVLGESEEHVRKSHS  60

Query  72  RYFTG  76
           RYF+ 
Sbjct  61  RYFSA  65


>gi|262183712|ref|ZP_06043133.1| hypothetical protein CaurA7_06963 [Corynebacterium aurimucosum 
ATCC 700975]
Length=76

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 22/67 (33%), Positives = 42/67 (63%), Gaps = 0/67 (0%)

Query  12  VAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHS  71
           +  Y+++Y+R T    +TE+ +  E    R +L+    D ++EIVA+ +K+L +++ TH+
Sbjct  1   MPAYLIKYHRPTGALEVTEYESLIEGTRARHRLDQVNKDPDVEIVAIGAKNLESVRHTHA  60

Query  72  RYFTGEE  78
           RYF  E+
Sbjct  61  RYFFREK  67


>gi|227488313|ref|ZP_03918629.1| hypothetical protein HMPREF0294_1463 [Corynebacterium glucuronolyticum 
ATCC 51867]
 gi|227091723|gb|EEI27035.1| hypothetical protein HMPREF0294_1463 [Corynebacterium glucuronolyticum 
ATCC 51867]
Length=85

 Score = 45.1 bits (105),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 23/63 (37%), Positives = 39/63 (62%), Gaps = 1/63 (1%)

Query  15  YVVEYNRRTHVRRITEFATPQEAMEHRLKLEAE-RTDSNIEIVALVSKSLGTLKQTHSRY  73
           +V+ YN +T   R++EFA    A+  R++ E   R + ++E+V + + SL  +KQ+HSRY
Sbjct  4   FVLVYNSKTGELRMSEFADRDAALALRIEREDRYRGEPDVEVVVIAAHSLDEIKQSHSRY  63

Query  74  FTG  76
           F  
Sbjct  64  FMN  66


>gi|354566263|ref|ZP_08985436.1| peptidase S41 [Fischerella sp. JSC-11]
 gi|353546771|gb|EHC16219.1| peptidase S41 [Fischerella sp. JSC-11]
Length=429

 Score = 35.4 bits (80),  Expect = 4.3, Method: Composition-based stats.
 Identities = 15/43 (35%), Positives = 27/43 (63%), Gaps = 0/43 (0%)

Query  36   EAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHSRYFTGEE  78
            +AM  + K +A +  S+ E  A +++ L  L+ +H+RY+T EE
Sbjct  66   KAMREKYKSQAAQAKSSQEFAATINQMLSELQTSHTRYYTKEE  108



Lambda     K      H
   0.314    0.130    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 181169457900




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Oct 14, 2012  4:13 PM
  Number of letters in database: 7,218,481,314
  Number of sequences in database:  21,062,489



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40