BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1375 Length=439 Score E Sequences producing significant alignments: (Bits) Value gi|15608515|ref|NP_215891.1| hypothetical protein Rv1375 [Mycoba... 888 0.0 gi|289745125|ref|ZP_06504503.1| conserved hypothetical protein [... 886 0.0 gi|121637305|ref|YP_977528.1| hypothetical protein BCG_1436 [Myc... 885 0.0 gi|31792569|ref|NP_855062.1| hypothetical protein Mb1410 [Mycoba... 881 0.0 gi|340626389|ref|YP_004744841.1| hypothetical protein MCAN_13911... 874 0.0 gi|323720128|gb|EGB29232.1| hypothetical protein TMMG_02076 [Myc... 844 0.0 gi|167968427|ref|ZP_02550704.1| hypothetical protein MtubH3_1048... 821 0.0 gi|308231824|ref|ZP_07413893.2| hypothetical protein TMAG_03379 ... 820 0.0 gi|326902998|gb|EGE49931.1| UPF0142 protein [Mycobacterium tuber... 749 0.0 gi|289761534|ref|ZP_06520912.1| conserved hypothetical protein [... 743 0.0 gi|183982509|ref|YP_001850800.1| hypothetical protein MMAR_2494 ... 587 2e-165 gi|240170138|ref|ZP_04748797.1| hypothetical protein MkanA1_1254... 573 2e-161 gi|240169071|ref|ZP_04747730.1| hypothetical protein MkanA1_0714... 566 3e-159 gi|240167688|ref|ZP_04746347.1| hypothetical protein MkanA1_0013... 521 1e-145 gi|297157814|gb|ADI07526.1| hypothetical protein SBI_04406 [Stre... 213 4e-53 gi|297155643|gb|ADI05355.1| hypothetical protein SBI_02234 [Stre... 203 6e-50 gi|302531858|ref|ZP_07284200.1| hypothetical protein SSMG_08240 ... 197 4e-48 gi|162455406|ref|YP_001617773.1| hypothetical protein sce7124 [S... 159 1e-36 gi|312602564|ref|YP_004022409.1| hypothetical protein RBRH_00235... 157 3e-36 gi|254465070|ref|ZP_05078481.1| YcaO-like family [Rhodobacterale... 156 9e-36 gi|162457357|ref|YP_001619724.1| hypothetical protein sce9072 [S... 154 2e-35 gi|209967026|ref|YP_002299941.1| hypothetical protein RC1_3786 [... 153 4e-35 gi|162448810|ref|YP_001611177.1| hypothetical protein sce0540 [S... 152 9e-35 gi|288962093|ref|YP_003452388.1| ycaO protein [Azospirillum sp. ... 152 1e-34 gi|116754698|ref|YP_843816.1| hypothetical protein Mthe_1401 [Me... 152 1e-34 gi|254512851|ref|ZP_05124917.1| YcaO-like family protein [Rhodob... 152 2e-34 gi|162457038|ref|YP_001619405.1| hypothetical protein sce8753 [S... 150 5e-34 gi|330468892|ref|YP_004406635.1| hypothetical protein VAB18032_2... 149 1e-33 gi|89054752|ref|YP_510203.1| hypothetical protein Jann_2261 [Jan... 149 1e-33 gi|262199465|ref|YP_003270674.1| hypothetical protein Hoch_6310 ... 147 3e-33 gi|288960709|ref|YP_003451049.1| hypothetical protein AZL_a09740... 147 5e-33 gi|163746794|ref|ZP_02154151.1| hypothetical protein OIHEL45_153... 146 6e-33 gi|336035262|gb|AEH81193.1| protein of unknown function DUF181 [... 143 5e-32 gi|13432020|sp|Q52871.1|YTF3_RHILT RecName: Full=UPF0142 protein... 142 8e-32 gi|150378083|ref|YP_001314678.1| hypothetical protein Smed_6106 ... 141 2e-31 gi|338732822|ref|YP_004671295.1| hypothetical protein SNE_A09270... 139 1e-30 gi|209546417|ref|YP_002278307.1| hypothetical protein Rleg2_6037... 137 5e-30 gi|326795593|ref|YP_004313413.1| YcaO-domain protein [Marinomona... 137 5e-30 gi|307352253|ref|YP_003893304.1| methanogenesis marker protein 1... 135 1e-29 gi|330508549|ref|YP_004384977.1| putative methanogenesis marker ... 134 4e-29 gi|116255806|ref|YP_771639.1| hypothetical protein pRL110605 [Rh... 133 5e-29 gi|300863880|ref|ZP_07108801.1| conserved hypothetical protein [... 133 6e-29 gi|336120687|ref|YP_004575473.1| hypothetical protein MLP_50560 ... 133 6e-29 gi|21227560|ref|NP_633482.1| hypothetical protein MM_1458 [Metha... 133 6e-29 gi|325958165|ref|YP_004289631.1| methanogenesis marker protein 1... 132 2e-28 gi|54292916|ref|YP_122303.1| hypothetical protein plpl0009 [Legi... 131 2e-28 gi|147919709|ref|YP_686545.1| hypothetical protein RCIX2079 [unc... 131 2e-28 gi|88601828|ref|YP_502006.1| hypothetical protein Mhun_0527 [Met... 130 5e-28 gi|116255454|ref|YP_771287.1| hypothetical protein pRL110255 [Rh... 130 6e-28 gi|282163224|ref|YP_003355609.1| hypothetical protein MCP_0554 [... 130 7e-28 >gi|15608515|ref|NP_215891.1| hypothetical protein Rv1375 [Mycobacterium tuberculosis H37Rv] gi|15840833|ref|NP_335870.1| hypothetical protein MT1419 [Mycobacterium tuberculosis CDC1551] gi|148661166|ref|YP_001282689.1| hypothetical protein MRA_1384 [Mycobacterium tuberculosis H37Ra] 29 more sequence titles Length=439 Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/439 (100%), Positives = 439/439 (100%), Gaps = 0/439 (0%) Query 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH Sbjct 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS Sbjct 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 Query 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW Sbjct 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 Query 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME Sbjct 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 Query 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS Sbjct 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 Query 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR Sbjct 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 Query 361 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA Sbjct 361 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 Query 421 PGLVLSSASPMRTPLQEAE 439 PGLVLSSASPMRTPLQEAE Sbjct 421 PGLVLSSASPMRTPLQEAE 439 >gi|289745125|ref|ZP_06504503.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289685653|gb|EFD53141.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=439 Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/439 (99%), Positives = 438/439 (99%), Gaps = 0/439 (0%) Query 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH Sbjct 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS Sbjct 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 Query 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW Sbjct 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 Query 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMD TGLASGNCYDEATLHALYEVME Sbjct 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDITGLASGNCYDEATLHALYEVME 240 Query 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS Sbjct 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 Query 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR Sbjct 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 Query 361 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA Sbjct 361 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 Query 421 PGLVLSSASPMRTPLQEAE 439 PGLVLSSASPMRTPLQEAE Sbjct 421 PGLVLSSASPMRTPLQEAE 439 >gi|121637305|ref|YP_977528.1| hypothetical protein BCG_1436 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989780|ref|YP_002644467.1| hypothetical protein JTY_1411 [Mycobacterium bovis BCG str. Tokyo 172] gi|289442818|ref|ZP_06432562.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] 16 more sequence titles Length=439 Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/439 (99%), Positives = 438/439 (99%), Gaps = 0/439 (0%) Query 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH Sbjct 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 GTHRITSPDETWLALQPFLAPAGIT VADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS Sbjct 61 GTHRITSPDETWLALQPFLAPAGITRVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 Query 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW Sbjct 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 Query 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME Sbjct 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 Query 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS Sbjct 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 Query 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR Sbjct 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 Query 361 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA Sbjct 361 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 Query 421 PGLVLSSASPMRTPLQEAE 439 PGLVLSSASPMRTPLQEAE Sbjct 421 PGLVLSSASPMRTPLQEAE 439 >gi|31792569|ref|NP_855062.1| hypothetical protein Mb1410 [Mycobacterium bovis AF2122/97] gi|31618158|emb|CAD94271.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] Length=439 Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/439 (99%), Positives = 437/439 (99%), Gaps = 0/439 (0%) Query 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH Sbjct 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 GTHRITSPDETWLALQPFLAPAGIT VADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS Sbjct 61 GTHRITSPDETWLALQPFLAPAGITRVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 Query 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW Sbjct 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 Query 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME Sbjct 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 Query 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS Sbjct 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 Query 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 ATLEVTFGGFGLHHDPNVALS AITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR Sbjct 301 ATLEVTFGGFGLHHDPNVALSPAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 Query 361 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA Sbjct 361 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 Query 421 PGLVLSSASPMRTPLQEAE 439 PGLVLSSASPMRTPLQEAE Sbjct 421 PGLVLSSASPMRTPLQEAE 439 >gi|340626389|ref|YP_004744841.1| hypothetical protein MCAN_13911 [Mycobacterium canettii CIPT 140010059] gi|340004579|emb|CCC43723.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=439 Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/439 (99%), Positives = 435/439 (99%), Gaps = 0/439 (0%) Query 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 MTG RLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH Sbjct 1 MTGHRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 GTHRITSPDETWLALQPFLAPAGIT VADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS Sbjct 61 GTHRITSPDETWLALQPFLAPAGITRVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 Query 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW Sbjct 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 Query 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME Sbjct 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 Query 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 RHSVAAAVAGETMFEV TDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS Sbjct 241 RHSVAAAVAGETMFEVRTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 Query 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDL SAIYHRFGRVHTYAKAR Sbjct 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLASAIYHRFGRVHTYAKAR 360 Query 361 KTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 KTSLRL+RARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA Sbjct 361 KTSLRLSRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLA 420 Query 421 PGLVLSSASPMRTPLQEAE 439 PGL+LSSASPMRTPLQEAE Sbjct 421 PGLMLSSASPMRTPLQEAE 439 >gi|323720128|gb|EGB29232.1| hypothetical protein TMMG_02076 [Mycobacterium tuberculosis CDC1551A] Length=418 Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/418 (99%), Positives = 418/418 (100%), Gaps = 0/418 (0%) Query 22 VGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAP 81 +GSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAP Sbjct 1 MGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAP 60 Query 82 AGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENV 141 AGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENV Sbjct 61 AGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENV 120 Query 142 TADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLV 201 TADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLV Sbjct 121 TADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLV 180 Query 202 NVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDV 261 NVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDV Sbjct 181 NVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDV 240 Query 262 AGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALS 321 AGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALS Sbjct 241 AGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALS 300 Query 322 RAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDS 381 RAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDS Sbjct 301 RAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDS 360 Query 382 LPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE 439 LPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE Sbjct 361 LPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE 418 >gi|167968427|ref|ZP_02550704.1| hypothetical protein MtubH3_10481 [Mycobacterium tuberculosis H37Ra] gi|308369783|ref|ZP_07419041.2| hypothetical protein TMBG_01203 [Mycobacterium tuberculosis SUMu002] gi|308370703|ref|ZP_07422426.2| hypothetical protein TMCG_01008 [Mycobacterium tuberculosis SUMu003] 14 more sequence titles Length=406 Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/406 (99%), Positives = 406/406 (100%), Gaps = 0/406 (0%) Query 34 VLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWL 93 +LSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWL Sbjct 1 MLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWL 60 Query 94 DCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDL 153 DCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDL Sbjct 61 DCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDL 120 Query 154 EADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPM 213 EADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPM Sbjct 121 EADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPM 180 Query 214 FEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMI 273 FEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMI Sbjct 181 FEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMI 240 Query 274 RDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRIT 333 RDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRIT Sbjct 241 RDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRIT 300 Query 334 AISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAV 393 AISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAV Sbjct 301 AISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAV 360 Query 394 ANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE 439 ANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE Sbjct 361 ANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE 406 >gi|308231824|ref|ZP_07413893.2| hypothetical protein TMAG_03379 [Mycobacterium tuberculosis SUMu001] gi|308378923|ref|ZP_07484326.2| hypothetical protein TMJG_03765 [Mycobacterium tuberculosis SUMu010] gi|308380060|ref|ZP_07488546.2| hypothetical protein TMKG_01879 [Mycobacterium tuberculosis SUMu011] gi|308215936|gb|EFO75335.1| hypothetical protein TMAG_03379 [Mycobacterium tuberculosis SUMu001] gi|308358810|gb|EFP47661.1| hypothetical protein TMJG_03765 [Mycobacterium tuberculosis SUMu010] gi|308362758|gb|EFP51609.1| hypothetical protein TMKG_01879 [Mycobacterium tuberculosis SUMu011] Length=406 Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/406 (99%), Positives = 405/406 (99%), Gaps = 0/406 (0%) Query 34 VLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWL 93 +LSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWL Sbjct 1 MLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWL 60 Query 94 DCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDL 153 DCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVS VMESLEGWHAENVTADLWSATARDL Sbjct 61 DCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSVVMESLEGWHAENVTADLWSATARDL 120 Query 154 EADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPM 213 EADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPM Sbjct 121 EADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPM 180 Query 214 FEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMI 273 FEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMI Sbjct 181 FEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMI 240 Query 274 RDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRIT 333 RDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRIT Sbjct 241 RDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRIT 300 Query 334 AISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAV 393 AISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAV Sbjct 301 AISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAV 360 Query 394 ANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE 439 ANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE Sbjct 361 ANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE 406 >gi|326902998|gb|EGE49931.1| UPF0142 protein [Mycobacterium tuberculosis W-148] Length=437 Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/372 (99%), Positives = 370/372 (99%), Gaps = 0/372 (0%) Query 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH Sbjct 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS Sbjct 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 Query 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW Sbjct 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 Query 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME Sbjct 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 Query 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS Sbjct 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 Query 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR Sbjct 301 ATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKAR 360 Query 361 KTSLRLNRARPT 372 KTSLRLNRA T Sbjct 361 KTSLRLNRAADT 372 >gi|289761534|ref|ZP_06520912.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709040|gb|EFD73056.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=442 Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/448 (87%), Positives = 392/448 (88%), Gaps = 15/448 (3%) Query 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH Sbjct 1 MTGRRLARFPAFRAGVAQDDDVGSTLSQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRH 60 Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS Sbjct 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 Query 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW Sbjct 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 Query 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME Sbjct 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 Query 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTS 300 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAG + C T Sbjct 241 RHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGGRCGPC------PHRCLGTVTTG 294 Query 301 ATLEVTFGGFG-----LHHDPNVALSR---AITEAAQSRITAISGA-REDLPSAIYHRFG 351 E+T G + P R ITE Q S E+LPSAIYHRFG Sbjct 295 FAAELTLRDAGGDLRRVRGTPPTLTWRYRGRITECGQVAHRGSSAEPAENLPSAIYHRFG 354 Query 352 RVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADA 411 RVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADA Sbjct 355 RVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADA 414 Query 412 CVPVVKVLAPGLVLSSASPMRTPLQEAE 439 CVPVVKVLAPGLVLSSASPMRTPLQEAE Sbjct 415 CVPVVKVLAPGLVLSSASPMRTPLQEAE 442 >gi|183982509|ref|YP_001850800.1| hypothetical protein MMAR_2494 [Mycobacterium marinum M] gi|183175835|gb|ACC40945.1| conserved hypothetical protein [Mycobacterium marinum M] Length=420 Score = 587 bits (1512), Expect = 2e-165, Method: Compositional matrix adjust. Identities = 291/404 (73%), Positives = 325/404 (81%), Gaps = 0/404 (0%) Query 36 SGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDC 95 +GP+WS+WP RVLG ADPTTI HR GTHR SPD+TW A+QP LA AGIT VAD+TWLD Sbjct 17 NGPDWSHWPVRVLGHADPTTIGHRAGTHRTISPDQTWQAVQPLLAQAGITRVADLTWLDD 76 Query 96 LGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEA 155 LGIPTVQAVRPASLTLSVSQGKA +YRAAQVSAVMESLE WHAENVT + + ARDL Sbjct 77 LGIPTVQAVRPASLTLSVSQGKATTYRAAQVSAVMESLENWHAENVTPTMLATPARDLTV 136 Query 156 DLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFE 215 +LTYDPA L GSLYH KLDWMVATTLL+GRRT+VPW + +VNVA D W PPMF Sbjct 137 ELTYDPADLNRPAGSLYHPSAKLDWMVATTLLSGRRTFVPWLSTVVNVAVNDSWGPPMFG 196 Query 216 MDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRD 275 MDTTGLASGN Y EAT+HALYE+MERH +A A G T+F VP +DVA SD A LVEMI Sbjct 197 MDTTGLASGNSYHEATVHALYEIMERHGMATAEPGSTLFHVPLEDVARSDCAELVEMIHQ 256 Query 276 AGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAI 335 AG +V +ARID WDG+YCFAAELTS LEV F G GLHHDPNVALSRAITEAAQSR+TAI Sbjct 257 AGSEVQVARIDTWDGFYCFAAELTSPMLEVPFSGSGLHHDPNVALSRAITEAAQSRLTAI 316 Query 336 SGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAVAN 395 SGAREDLPSAIYHRF RVH+YA ++ + A PT W + +SL EL+A+AATAV Sbjct 317 SGAREDLPSAIYHRFARVHSYAAVHRSMQSMPDAEPTAWHIDYTNSLGELLATAATAVTK 376 Query 396 RSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEAE 439 RSGTEPLAVVC+FADACVPVVKV+APGL S ASPMRTPLQE + Sbjct 377 RSGTEPLAVVCEFADACVPVVKVIAPGLSASIASPMRTPLQEHQ 420 >gi|240170138|ref|ZP_04748797.1| hypothetical protein MkanA1_12548 [Mycobacterium kansasii ATCC 12478] Length=418 Score = 573 bits (1477), Expect = 2e-161, Method: Compositional matrix adjust. Identities = 287/410 (70%), Positives = 324/410 (80%), Gaps = 0/410 (0%) Query 28 QGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGV 87 +G+ + +GP+WS+WP RVLG ADPTTI +R GTHRI SPD+TW A+QP L AGIT V Sbjct 7 RGTQQLMKAGPDWSHWPPRVLGHADPTTIGYRAGTHRIISPDQTWQAVQPALERAGITRV 66 Query 88 ADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWS 147 AD+TWLD LGIPTVQAVRPASLTLSVSQGKA +YRAAQVSAVMESLE WH E++T DL S Sbjct 67 ADLTWLDDLGIPTVQAVRPASLTLSVSQGKATTYRAAQVSAVMESLENWHVESITPDLLS 126 Query 148 ATARDLEADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRD 207 + DL +LTYDPA+L GS YH G KLDWM+ATTLLTGRRT+VPW A +VNVA D Sbjct 127 RSTTDLARELTYDPAELNRPAGSFYHPGAKLDWMIATTLLTGRRTFVPWLATVVNVAVSD 186 Query 208 CWEPPMFEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSA 267 W PPMF MDTTGLASGN Y EATLH LYE+MERH +A A G T+FEVP DD A S+ A Sbjct 187 SWGPPMFGMDTTGLASGNSYHEATLHGLYEIMERHGMATAAPGSTLFEVPLDDAARSECA 246 Query 268 HLVEMIRDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEA 327 LVEMI AG ++ +ARID WDG+YCFAAE+TS E+ F G GLHHDPNVALSRAITEA Sbjct 247 ELVEMIHRAGSELSVARIDSWDGFYCFAAEITSPMAEIPFSGSGLHHDPNVALSRAITEA 306 Query 328 AQSRITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVA 387 AQSR+TAISGAREDLPSAIYHRF RVHTYA AR++ + A TPW + +SL EL+A Sbjct 307 AQSRLTAISGAREDLPSAIYHRFARVHTYAPARRSMQPMPAAPATPWHIDYSNSLTELLA 366 Query 388 SAATAVANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQE 437 AATAV RSG EPLAVVCDF DACVPVVKV+APGL S SPMRTPLQE Sbjct 367 LAATAVTVRSGVEPLAVVCDFDDACVPVVKVIAPGLSASIHSPMRTPLQE 416 >gi|240169071|ref|ZP_04747730.1| hypothetical protein MkanA1_07144 [Mycobacterium kansasii ATCC 12478] Length=416 Score = 566 bits (1458), Expect = 3e-159, Method: Compositional matrix adjust. Identities = 287/412 (70%), Positives = 322/412 (79%), Gaps = 0/412 (0%) Query 27 SQGSTTGVLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITG 86 S + T GP+WS WP+RVLG A+PT+IAHR GT+RI SP++TW A+QP L AGIT Sbjct 4 SCAAATAASVGPDWSQWPTRVLGHANPTSIAHRAGTYRIMSPEQTWRAVQPMLELAGITR 63 Query 87 VADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLW 146 VAD+TWLD LGIPTVQAVRPAS+TLSVSQGKAA+YRAAQVSAVMESLE WHAENVT DL+ Sbjct 64 VADLTWLDDLGIPTVQAVRPASVTLSVSQGKAATYRAAQVSAVMESLETWHAENVTPDLF 123 Query 147 SATARDLEADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATR 206 S DL A LTYDPA L S+YH G KLDWM ATTLLTGR+TWVPW AVLVN A Sbjct 124 SMRTTDLAAALTYDPAHLLLSARSIYHPGAKLDWMTATTLLTGRQTWVPWEAVLVNAAVD 183 Query 207 DCWEPPMFEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDS 266 + W+PPMF MDTTGLASGN Y EA+LH LYEVMERH++AA G T+FEVP DDVA S Sbjct 184 NRWDPPMFSMDTTGLASGNSYWEASLHGLYEVMERHAMAAGEPGSTLFEVPVDDVADSGC 243 Query 267 AHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITE 326 A LV+MI AG ++ +AR D WDG+ CF AE+ S L V F GFGLHHDPNVALSRAITE Sbjct 244 AELVDMIYRAGSELKIARTDTWDGFPCFTAEICSPMLGVPFSGFGLHHDPNVALSRAITE 303 Query 327 AAQSRITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELV 386 AAQSR+TAISGAREDL A+YHRF RVH Y R T L A PTPW VP DSL +L+ Sbjct 304 AAQSRLTAISGAREDLSPALYHRFARVHAYGPLRPTMRHLPTAEPTPWHVPGTDSLSDLL 363 Query 387 ASAATAVANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSSASPMRTPLQEA 438 ASAATAVA+RSGTEPLAVVCD A +CVPVVKV+APGL S SPMRTPLQE+ Sbjct 364 ASAATAVADRSGTEPLAVVCDLAGSCVPVVKVIAPGLTASHGSPMRTPLQES 415 >gi|240167688|ref|ZP_04746347.1| hypothetical protein MkanA1_00130 [Mycobacterium kansasii ATCC 12478] Length=415 Score = 521 bits (1341), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 274/407 (68%), Positives = 310/407 (77%), Gaps = 3/407 (0%) Query 32 TGVLSGPNWSYWPSRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVT 91 T V GP+WS+WP+R LGSADP I HR GTHR SP+ETW A+QP L+ AGIT VAD+T Sbjct 9 TAVNFGPDWSFWPNRFLGSADPAVIGHRMGTHRTISPEETWQAVQPLLSAAGITRVADIT 68 Query 92 WLDCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATAR 151 WLD LGIPTVQAVRPASLT+SVSQGKA SYRAAQVSAVMESLE WHAEN TADL A+ + Sbjct 69 WLDSLGIPTVQAVRPASLTVSVSQGKATSYRAAQVSAVMESLEYWHAENATADLRFASTK 128 Query 152 DLEADLTYDPAQLRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEP 211 DL+++LTYDP L PGS YH G +LDWM ATTLLTGRRTWVPW+ V V+++ D W P Sbjct 129 DLDSELTYDPGSLSRPPGSFYHRGARLDWMAATTLLTGRRTWVPWSVVAVDISVNDRWGP 188 Query 212 PMFEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVE 271 PMF M T GLASGN Y EA LH LYE+MERH+V AVAG TM+ V D+ G+D A LV+ Sbjct 189 PMFTMHTQGLASGNSYYEAALHGLYEIMERHAVGTAVAGSTMWAVRPPDLDGADCAGLVD 248 Query 272 MIRDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSR 331 + AG + +AR+DVW GYYCFAAEL S T V F G GLHHDPNVALSRAITEAAQSR Sbjct 249 QVHRAGSQLRIARLDVWQGYYCFAAELISPTSSVQFAGSGLHHDPNVALSRAITEAAQSR 308 Query 332 ITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAAT 391 +TAISG RED+P+ IY R A + + ARPT WRVPD DSLP LVA+AAT Sbjct 309 LTAISGTREDIPATIYERLAEAPASAARPPARMPV--ARPTSWRVPDTDSLPALVAAAAT 366 Query 392 AVANRSGTEPLAVVCDFADACVPVVKVLAPGLVLSS-ASPMRTPLQE 437 AVA R+G EP AVVCD ACVPVVKV+APGL LSS ASPMRTPLQE Sbjct 367 AVARRTGIEPAAVVCDSPGACVPVVKVVAPGLSLSSVASPMRTPLQE 413 >gi|297157814|gb|ADI07526.1| hypothetical protein SBI_04406 [Streptomyces bingchenggensis BCW-1] Length=407 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 146/385 (38%), Positives = 205/385 (54%), Gaps = 30/385 (7%) Query 52 DPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTL 111 D T A GTHR+ +P ET +QP GIT +ADVTWLD +GIP QAVRP S T+ Sbjct 33 DDTRKACVSGTHRVLTPTETLRRIQPLFPIVGITRLADVTWLDEIGIPVHQAVRPNSRTV 92 Query 112 SVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSL 171 SVSQGK ++ A+VSA MES+E WHAE + +AT D+E Y +L P Sbjct 93 SVSQGKGITHDLAKVSAAMESIESWHAERIDPGETTATVADMERACGYRVHELALEPRHH 152 Query 172 YHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEAT 231 G++L+W A+ L G +++P + ++ RD W PP+F ++ GLASGN + EA Sbjct 153 LWPGMELEWTRASRLDDGTDSFLPTDLLRLDGRVRDTWMPPLFAQNSDGLASGNTFAEAA 212 Query 232 LHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSA--HLVEMIRDAGDDVDLARIDVWD 289 LH +YEV+ER +A A + P D+A D L++++ A +V + Sbjct 213 LHGIYEVIERDCLARAETDPS----PALDLATVDGPAWELLDLMDAAAVEVRVEVPPSPT 268 Query 290 GYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHR 349 G CF A + S V F G G H D +VALSRA+TEAAQSR T I+GAR+DL + Y R Sbjct 269 GVACFLATIWSEEFPVLFAGAGAHLDRDVALSRALTEAAQSRATQIAGARDDLTTGAYRR 328 Query 350 FGRVHTYAKARKTSLRLNRARPTPWRVPD-----------VDSLPELVASAATAVANRSG 398 V +++ ARP P D ++L + + + T+V + +G Sbjct 329 A--VSSWS-----------ARPAPLSKADRLTYDEIASVRNETLADDLHTTVTSVLSLTG 375 Query 399 TEPLAVVCDFADACVPVVKVLAPGL 423 PL +PVV+V+ PGL Sbjct 376 RSPLIADHTRPHLGIPVVRVVCPGL 400 >gi|297155643|gb|ADI05355.1| hypothetical protein SBI_02234 [Streptomyces bingchenggensis BCW-1] Length=399 Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 125/293 (43%), Positives = 164/293 (56%), Gaps = 4/293 (1%) Query 58 HRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGK 117 H GTHR+ P+ETW + GIT VADVT LD LG+P V AVRPA+ TL+VSQGK Sbjct 9 HFDGTHRVRHPEETWTLINGLRDRFGITRVADVTGLDTLGVPVVMAVRPAAKTLTVSQGK 68 Query 118 AASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVK 177 AS A+VSAVMES+E WHAE E +L YD L+ GSL Sbjct 69 GASLLLARVSAVMESVELWHAEYACPAPELKHTPACELELPYDVCDLQQHHGSLLSERTP 128 Query 178 LDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYE 237 LDW++ ++G +T VP V V+ W+PP+ T GLA GN YDEA HALYE Sbjct 129 LDWVIGVDAVSGTKTLVPRAYVRVDYQVSRAWQPPLLHGSTNGLAGGNTYDEALAHALYE 188 Query 238 VMERHSVAAAVAGETMFEVPTDDVAGSD---SAHLVEMIRDAGDDVDLARIDVWDGYYCF 294 V+ER A + + E D + D A ++ I DAG V++ + G CF Sbjct 189 VIER-DCTATIGSLPVAERRHVDPSSVDDPLCATVLGRIADAGAWVEIVEVPNRWGLPCF 247 Query 295 AAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIY 347 + + S G G+H P VALSRA+TE+AQSR+TAI+G+R+DL + ++ Sbjct 248 VSYIWSEDFPALAVGSGVHGSPAVALSRALTESAQSRLTAIAGSRDDLAAVLF 300 >gi|302531858|ref|ZP_07284200.1| hypothetical protein SSMG_08240 [Streptomyces sp. AA4] gi|302440753|gb|EFL12569.1| hypothetical protein SSMG_08240 [Streptomyces sp. AA4] Length=401 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 148/379 (40%), Positives = 199/379 (53%), Gaps = 11/379 (2%) Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 GTHR +P++TW ++P L G+T VADVT LDC+G+P AVRPAS TLSV+QGK Sbjct 10 GTHRARAPEDTWALIEPLLPGYGVTRVADVTGLDCIGVPVFLAVRPASETLSVAQGKGHD 69 Query 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGVKLDW 180 A++SAVME+LE HAE+ + +A ARDL DL YD A L R + + LDW Sbjct 70 PILAKLSAVMETLEQQHAEHPGNERRTALARDL--DLQYDVANLNARVTADAFDLLVLDW 127 Query 181 MVATTLLTGRRTWVPWTAV-LVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVM 239 L +G TW+P V L +TRD W+P F+ + GLASGN +DEA LH LYEV+ Sbjct 128 YRGVGLRSGTPTWIPCDVVDLAFTSTRD-WQPVPFDASSNGLASGNTHDEAVLHGLYEVI 186 Query 240 ERHSVAAAVAGETMFEVPTD--DVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAE 297 ER V+ V D ++ + + DAG ++LA + A Sbjct 187 ERDVVSTLKEHAPDHRVFLDPRSISSPFCQDTIRRLDDAGVQLELALVPNPYALPVAVAC 246 Query 298 LTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYA 357 + S G G H DP VA+SRA+TEA Q+R+T I+G R+D+PS I F V Sbjct 247 IWSQDYPAVCAGAGAHSDPAVAVSRALTEAVQTRLTEITGTRDDIPSEI-DVFSSVCDEP 305 Query 358 KARKTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVK 417 + T L + A D SL +A+ A V SG EP+ + VVK Sbjct 306 RFTVTGLDWDLAVEG-LGFQDT-SLSSELATLARRVEAVSGHEPIVLDLSTRPDVFSVVK 363 Query 418 VLAPGL--VLSSASPMRTP 434 V+ PGL +L + P +P Sbjct 364 VVGPGLRTMLRNDIPRYSP 382 >gi|162455406|ref|YP_001617773.1| hypothetical protein sce7124 [Sorangium cellulosum 'So ce 56'] gi|161165988|emb|CAN97293.1| hypothetical protein sce7124 [Sorangium cellulosum 'So ce 56'] Length=424 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 113/296 (39%), Positives = 153/296 (52%), Gaps = 18/296 (6%) Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAAS 120 GTHR SP+ET L+P + GIT VADVT LD LG+P V RP + +LSVSQGK + Sbjct 27 GTHRAVSPEETMARLRPLMPVMGITRVADVTGLDTLGVPVVMVTRPNARSLSVSQGKGLT 86 Query 121 YRAAQVSAVMESLEGWHAENVTADLWSATARDLE-ADLTYDPAQLRHRPGSLYHAGVKLD 179 AA+ S +ME++E WHAE V L T +L D + L S +H ++L Sbjct 87 LAAARASGLMEAVEHWHAERVQLPLKLGTVNELRFRHRLVDVSALPRLSISAFHDDLRLH 146 Query 180 WMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVM 239 W++ L+ G TWVP+ V + + F M + GLASGN EA HAL E++ Sbjct 147 WVIGMDLVAGAPTWVPFEVVHTDYSLPLLSASGCFVMSSNGLASGNHPLEAISHALCELI 206 Query 240 ERHSVAA-AVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARID--VWD------- 289 ER + +AGE D++ D ++ D + A I+ VWD Sbjct 207 ERDAATLWWLAGEEHHRRTRIDLSTVDDPSCRALL----DGYERAGIEVYVWDITSDIGV 262 Query 290 -GYYCFAA--ELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDL 342 +YC E GG+G H VALSRA+TEAAQSR+T I+GAR+D+ Sbjct 263 PAFYCTLVDREPNPHRPIAPMGGYGCHPARGVALSRALTEAAQSRLTVITGARDDV 318 >gi|312602564|ref|YP_004022409.1| hypothetical protein RBRH_00235 [Burkholderia rhizoxinica HKI 454] gi|312169878|emb|CBW76890.1| Hypothetical cytosolic protein [Burkholderia rhizoxinica HKI 454] Length=409 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 120/313 (39%), Positives = 166/313 (54%), Gaps = 34/313 (10%) Query 54 TTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSV 113 T+ + GT R+ +P+ET +QP LA GIT V DVT LD +GIPT A+RP + LS+ Sbjct 7 TSHEYAQGTQRVCAPEETLRRIQPVLARCGITRVLDVTQLDRIGIPTYNAIRPNGIILSI 66 Query 114 SQGKAASYRAAQVSAVMESLEGWHAENVTADLW----SATARDLEADLTYDPAQL----- 164 S GK S AA VSA+MES+E H+E W SATA E DP L Sbjct 67 SNGKGWSSAAAAVSAIMESIEVEHSEYPDTSSWRLATSATALRTEGLDPVDPTTLIRDCL 126 Query 165 --RHRPGSLYHA-GVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTT-G 220 + G LY+ + LDW+ A L++G + +P + + PP + T+ G Sbjct 127 WPKDEYGGLYYTPELVLDWVEADELISGNKVMIPASTIYAV--------PPFLQYFTSNG 178 Query 221 LASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPT-------DDVAGSDSAHLVEMI 273 LASGN Y EA LHA+ E++ER ++ A + G T P+ D + G L E+I Sbjct 179 LASGNTYAEAVLHAICEIVERDAI-AKLMGRTKDSPPSRLRPIRLDSLPGH-LVKLAELI 236 Query 274 RDAGDDVDL----ARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQ 329 G ++ L + ID++ + F A + T GG+G H DP +A SRA+TEAAQ Sbjct 237 TSGGIELFLLSMPSAIDIYTFWTIFYCPGEPAFILSTSGGYGTHPDPVIAASRALTEAAQ 296 Query 330 SRITAISGAREDL 342 +R+ I GAREDL Sbjct 297 ARLAHIHGAREDL 309 >gi|254465070|ref|ZP_05078481.1| YcaO-like family [Rhodobacterales bacterium Y4I] gi|206685978|gb|EDZ46460.1| YcaO-like family [Rhodobacterales bacterium Y4I] Length=401 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 107/295 (37%), Positives = 156/295 (53%), Gaps = 25/295 (8%) Query 62 THRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASY 121 THR+ P +T ++P LA GIT +A++T LD +G+PTV RP S +++VS GK + Sbjct 13 THRLCDPAQTLATVRPHLAGMGITRIANLTGLDRVGLPTVMVARPNSRSVAVSLGKGLTL 72 Query 122 RAAQVSAVMESLEGWHAENVTADLWSATARDLEAD-LTYDPAQLRHRPGSLYHAGVKLDW 180 AAQ S VME++E WHAE +T L +A+ DL + L D +L G ++ ++ W Sbjct 73 EAAQASGVMEAVETWHAERITRSLRAASYADLRQEVLVADVERLPQVTGGTFNPHGRMLW 132 Query 181 MVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVME 240 + L++G+ W+P V + R C F T GLASGN EAT HA+ E++E Sbjct 133 VEGLDLVSGQPHWLPLEMVDTDYTARPCGGQGAFPRTTNGLASGNSLAEATCHAICELIE 192 Query 241 RHSVAA---AVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLA--RIDVWD------ 289 R ++ A AG P D A + R+A D + A R +W+ Sbjct 193 RDAITLWHHAPAG------PRIDAAAIEDPR----CREALDRFEAAGLRAGIWNITSDIG 242 Query 290 --GYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDL 342 ++C E + + G G H D +AL RA+TEAAQ+R+T ISGAR+DL Sbjct 243 VAAFHCMICEDGTRPGHIGIGS-GCHPDRGIALLRALTEAAQTRLTYISGARDDL 296 >gi|162457357|ref|YP_001619724.1| hypothetical protein sce9072 [Sorangium cellulosum 'So ce 56'] gi|161167939|emb|CAN99244.1| conserved hypothetical protein (YcaO-like family) [Sorangium cellulosum 'So ce 56'] Length=427 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 115/320 (36%), Positives = 158/320 (50%), Gaps = 28/320 (8%) Query 49 GSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPAS 108 G + P +GTHR SP+ET ++ F+ GIT +A+VT LD +GIP V RP S Sbjct 12 GLSGPEKKRFMNGTHRTASPEETLDRIKGFMPAMGITRIANVTGLDAIGIPVVVVCRPNS 71 Query 109 LTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDL-EADLTYDPAQLRHR 167 +LSVSQGK + AA+VS +MES+E +H EN+ L ++R+L + D + L Sbjct 72 RSLSVSQGKGLTLAAAKVSGLMESIEAYHGENIVRPLLLGSSRELRRSHAIADVSALPRT 131 Query 168 PGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCY 227 + L W L+ G WVP+ V VN P +F T GL+SGN Sbjct 132 SSVPFDEDTPLLWAEGYDLMRGAPVWVPYELVHVNATATGRVNPGIFCCSTNGLSSGNGL 191 Query 228 DEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHL-VEMIRDAGDDVDLARI- 285 EA + + EV+ER + A ++ TD+ D+ L ++ I D G LA+ Sbjct 192 LEAVSYGICEVVERDATA-------VWGALTDE--ERDARRLDLDSIDDPGCREVLAKFA 242 Query 286 ------DVWD--------GYYCFAAELTSATLEVTF--GGFGLHHDPNVALSRAITEAAQ 329 W+ Y C AE T + GG G H VAL RA+TEAAQ Sbjct 243 AAGVAVGAWETTSDVGIPSYECLIAERTEDAVRALHGSGGQGCHPSRAVALLRALTEAAQ 302 Query 330 SRITAISGAREDLPSAIYHR 349 +R+T ISGAR+DL A Y R Sbjct 303 TRLTVISGARDDLLRAEYDR 322 >gi|209967026|ref|YP_002299941.1| hypothetical protein RC1_3786 [Rhodospirillum centenum SW] gi|209960492|gb|ACJ01129.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length=414 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 137/401 (35%), Positives = 185/401 (47%), Gaps = 31/401 (7%) Query 50 SADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASL 109 SADP I RI +ET L+ FL GIT VA +T LD +GIP V RP S Sbjct 8 SADP--ILQADAWRRIVPAEETVARLKRFLPMFGITRVATLTGLDTVGIPVVMVNRPNSR 65 Query 110 TLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDL-EADLTYDPAQLRHRP 168 +L+VSQGK + AA+ S +MES+E WHAE + L + DL + DP +L Sbjct 66 SLAVSQGKGVTLAAAKASGLMESVEAWHAERIVQPLKIGSFEDLCYSHAMVDPDRLPRLS 125 Query 169 GSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYD 228 S Y ++ W+ +L R WVP+ V N F+ +T GLASGN Sbjct 126 SSRYTPHTQMLWIEGRSLTRDRSVWVPYEMVHTNYTLPLPSGHGCFQANTNGLASGNHPL 185 Query 229 EATLHALYEVMER------HSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDL 282 EA +H L E++ER H E ++ T VA L+ AG +V + Sbjct 186 EAVIHGLCELIERDALTLWHQKPEEAQDEDRLDLET--VADPVCRDLIGRFARAGVEVGV 243 Query 283 ARIDVWDGYYCFAAELTSATLEVTFG-----GFGLHHDPNVALSRAITEAAQSRITAISG 337 I G F + A E G G G H +AL+RA+TEAAQSR+T ISG Sbjct 244 WEITSDIGVPTFLCRIVQAEGEHATGIRPAIGCGTHLVREIALARALTEAAQSRLTFISG 303 Query 338 AREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLP-------ELVASAA 390 AR+D+ Y R A R R+ P + D +++P A Sbjct 304 ARDDMARVDYERM---LDPALQRTWLARIRHGAP----MRDFNAVPVWGGRSLRNDLDAL 356 Query 391 TAVANRSGT-EPLAVVCDFADACVPVVKVLAPGLVLSSASP 430 A +R+G EP+ V + +PVV+VLAPGL +SP Sbjct 357 LARLDRAGIEEPVVVDLTRRELGIPVVRVLAPGLEGVDSSP 397 >gi|162448810|ref|YP_001611177.1| hypothetical protein sce0540 [Sorangium cellulosum 'So ce 56'] gi|161159392|emb|CAN90697.1| hypothetical protein sce0540 [Sorangium cellulosum 'So ce 56'] Length=424 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 134/395 (34%), Positives = 189/395 (48%), Gaps = 27/395 (6%) Query 59 RHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKA 118 R GTHR+ P ET L+P L GIT VA+VT LD LGIP V RP + +LSVSQGK Sbjct 23 RDGTHRLVPPAETVERLRPLLPALGITRVANVTGLDILGIPVVMVCRPNARSLSVSQGKG 82 Query 119 ASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLR---HRPGSLYHAG 175 AA+ S +ME+ E +HAE +T+ L + +L T+ A +R R S +H Sbjct 83 VDLAAAKASGIMEATELYHAERITSPLKLGSLEELR--FTHRLADVRLLPQRAFSTFHPS 140 Query 176 VKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHAL 235 L W+ A + WVP+ V N F +TGLASGN EA H + Sbjct 141 APLLWIEALDWMRSEPLWVPFELVHTNYTLPLPTGSGAFLTSSTGLASGNHPLEAVSHGI 200 Query 236 YEVMERHS------VAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDV---DL-ARI 285 E +ER + + T ++ T D AG + L++ AG DV D+ + I Sbjct 201 CEAVERDAGTLWSLLDGGSRRATRLDLATVDDAGCRT--LLDRCERAGLDVAAWDIRSDI 258 Query 286 DVWDGYYCFAAELTSATLEVTF--GGFGLHHDPNVALSRAITEAAQSRITAISGAREDLP 343 D+ + C AE + L + G G H VALSRA+TEA QSR+T ISG+R+D+ Sbjct 259 DI-AAFRCMIAERSPGGLSSLYPAAGMGCHPAREVALSRALTEAVQSRMTMISGSRDDMS 317 Query 344 SAIYHRFGRVHTYAKA---RKTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTE 400 A Y R + + + R + P R ++ + E + + +G E Sbjct 318 RADYERRLDPELHRRVLQDMRDGAPGRRFQDVPTR--EITTFEEDIRWELEQLRT-AGIE 374 Query 401 PLAVV-CDFADACVPVVKVLAPGLVLSSASPMRTP 434 +AVV A+ +PVV+V+ PGL P P Sbjct 375 QVAVVDLTKAEIGIPVVRVVIPGLETIGGLPGYVP 409 >gi|288962093|ref|YP_003452388.1| ycaO protein [Azospirillum sp. B510] gi|288914359|dbj|BAI75844.1| ycaO protein [Azospirillum sp. B510] Length=423 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 131/406 (33%), Positives = 184/406 (46%), Gaps = 53/406 (13%) Query 57 AHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQG 116 AH GTHR+ +P++T + PFL GIT VA+VT LD +GIP V RP S ++SVSQG Sbjct 18 AHTVGTHRVMAPEQTLARVAPFLPIMGITRVANVTGLDAVGIPVVMVTRPNSRSISVSQG 77 Query 117 KAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLE-ADLTYDPAQLRHRPGSLYHAG 175 K + AA+ S VMES+E +HAE +T L A+ +L + +L + Sbjct 78 KGVTLAAAKASGVMESIESYHAERITLPLKFASFEELRWTHPVVNVDRLPRLSTGSFDPN 137 Query 176 VKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHAL 235 + W+ LL+G WVP+ V +N F + GLASGN EA HAL Sbjct 138 RPILWIEGQDLLSGGPKWVPFEMVHLNFTVPMAPGHGAFLAGSNGLASGNHRVEAISHAL 197 Query 236 YEVMERHSVA----AAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWD-- 289 E++ER + A + + D ++ L++ G + VW+ Sbjct 198 TELVERDATTLWRLKGPASQAATRIDLDSISDPVCRSLIDRFEAVG-----VAVGVWETT 252 Query 290 ------GYYCFAAE---LTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGARE 340 + C E L ++ G G H +ALSRA+TEAAQSR+T I+GAR+ Sbjct 253 SDVGLPAFLCRIVESEDLPQHSIRPA-TGMGCHVAREIALSRALTEAAQSRLTFIAGARD 311 Query 341 DLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVD-----SLPELVASAATAVAN 395 D+P A Y R L+ A WR VD S SAA + Sbjct 312 DMPRAEYER---------------HLDPAHHARWRAMIVDGAGRRSFHHCPTSAAATIEG 356 Query 396 ---------RSGTEPLAVVCDFA--DACVPVVKVLAPGLVLSSASP 430 R+ AVV D + +PVV+V+ PGL + SP Sbjct 357 DLAHQLDRLRAVGIEEAVVVDLTKPEFGIPVVRVVVPGLEGADESP 402 >gi|116754698|ref|YP_843816.1| hypothetical protein Mthe_1401 [Methanosaeta thermophila PT] gi|116666149|gb|ABK15176.1| uncharacterized domain protein [Methanosaeta thermophila PT] Length=403 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 140/400 (35%), Positives = 193/400 (49%), Gaps = 51/400 (12%) Query 58 HRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLT--LSVSQ 115 ++ THR P+ET ++ + AGIT VAD+T LD +GIP ++RP + +SV Sbjct 10 YKKDTHRALPPEETLEIVEKKMPAAGITRVADITNLDRIGIPVFTSIRPTAEKGAISVYN 69 Query 116 GKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAG 175 GK A+ A+VSA+ME +E + AE ADL +A +L + +PA+L P Sbjct 70 GKGATPTEAKVSAIMEGIERYSAEVRNADLRTARFSELREN-ALNPAEL-ILPRDADPDA 127 Query 176 VKLDWMVATTLLTGRRTWVPWTAV---LVNVATRDCWEPPMFEMDTTGLASGNCYDEATL 232 V + W+ L+ VP AV L + TR +F +TTGLASGN +EA Sbjct 128 V-IPWVTGYDLMGDEEILVPANAVFHPLPSSYTR------LFRTNTTGLASGNQLEEAIF 180 Query 233 HALYEVMERHSVAAAVAGETM---FEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWD 289 H L EV+ER + + A +M D +AG L+EM + A V + I Sbjct 181 HGLAEVVERDAWSIAEHARSMGPLLRYNGDGLAG----ELLEMFQRAEVQVYVRDITSDV 236 Query 290 GYYCFAAELTSATLE---VTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAI 346 G FAA L+ + G G H DP VAL RA+TE AQSR+T I GARED SA Sbjct 237 GVPTFAAVSDDVKLKDPALLTAGMGTHTDPEVALLRALTEVAQSRLTQIHGAREDTVSA- 295 Query 347 YHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPE------------LVASAATAVA 394 F R+ Y + + RLNR R D SL ++ TA Sbjct 296 --EFRRMMGYDRLK----RLNRHWFEYEREEDFSSLNSYNTDDFLDDIRYMLDRLQTAGF 349 Query 395 NRSGTEPLAVVCDF--ADACVPVVKVLAPGLVLSSASPMR 432 R A+V D ++ VPVV+V+ PGL +S+ P R Sbjct 350 ER------AIVVDLTASEIMVPVVRVIVPGLEISAVDPER 383 >gi|254512851|ref|ZP_05124917.1| YcaO-like family protein [Rhodobacteraceae bacterium KLH11] gi|221532850|gb|EEE35845.1| YcaO-like family protein [Rhodobacteraceae bacterium KLH11] Length=450 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 115/354 (33%), Positives = 172/354 (49%), Gaps = 24/354 (6%) Query 6 LARFPAFRAGVAQDDDV-GSTLSQGSTTGVLSGPNWSYWPSR--------VLGSADPTTI 56 L +RAG+A+ D G L+ G ++ +L+ + + P R V+G + + Sbjct 2 LGHVDKWRAGLAKADHTKGVLLTLGVSSRILTWGGF-FAPVRLAYQIFGKVIGMSGNSQK 60 Query 57 AHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQG 116 + THR+ P++T ++P+L GIT +A++T LD +G+PTV RP S +++VS G Sbjct 61 GYVLDTHRLRDPEQTLAIVKPYLKQMGITRIANLTGLDRVGLPTVMVTRPNSRSVAVSLG 120 Query 117 KAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAGV 176 K S AA+ S VME++E WHAE + L A DL D D ++L G + Sbjct 121 KGLSLSAAKASGVMEAIESWHAERIELPLRLANHVDLAGDHVVDVSRLPRVTGGQFDPHC 180 Query 177 KLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALY 236 + W+ L + + WVP+ V + T F T GLASGN EA+ HA+ Sbjct 181 AILWVQGRDLPSDQPCWVPYEMVDTDYTTSPAAGQRAFPRTTNGLASGNDVTEASCHAIC 240 Query 237 EVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWD------- 289 E++ER + V V +E I AG D + +W+ Sbjct 241 ELIERDATTLWHHRSDTPRVDPLTVDDPRCRQAIEQIMAAGLD-----LGIWNTTSDVGI 295 Query 290 -GYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDL 342 + C E AT + G G H D +AL RA+TEAAQ+R+T ISGAR+DL Sbjct 296 ASFRCAICEAGGATGHIGIGD-GCHPDRAIALLRALTEAAQTRLTYISGARDDL 348 >gi|162457038|ref|YP_001619405.1| hypothetical protein sce8753 [Sorangium cellulosum 'So ce 56'] gi|161167620|emb|CAN98925.1| hypothetical protein sce8753 [Sorangium cellulosum 'So ce 56'] Length=404 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 116/307 (38%), Positives = 150/307 (49%), Gaps = 26/307 (8%) Query 54 TTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSV 113 T A+ GT R SP +T ++P L GIT +ADVT LD +GIP V RP + ++SV Sbjct 4 TEKAYWRGTQRRISPADTLARVRPLLRRLGITRIADVTGLDSIGIPVVMVCRPNARSISV 63 Query 114 SQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTY-DPAQLRHRPGSLY 172 SQGK AA+ S VMES+E WHAE++ + TA +L A D A L + Sbjct 64 SQGKGLDLEAARASGVMESIEQWHAEHILRPMVFGTAAELAATRRLVDLAGLPRLAIGAF 123 Query 173 HAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPP---MFEMDTTGLASGNCYDE 229 KL W+ L G +P V + + PP F +TGLASGN E Sbjct 124 QPHRKLLWLDGVDLFDGAPRALPLEVVTTDYTSP---RPPGSGCFLSTSTGLASGNDALE 180 Query 230 ATLHALYEVMERHSVAAAVAG----ETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARI 285 ATLH LYEV+ER +VA AG + D V D L+ AG + Sbjct 181 ATLHGLYEVIERDAVAIWRAGGAEVRRRTRIALDTVDDLDCRALLRRFERAG-----VAV 235 Query 286 DVWD-----GYYCFAAELTSATLE-----VTFGGFGLHHDPNVALSRAITEAAQSRITAI 335 WD G AE+ + GG G H +AL+RA+TEAAQSR+TAI Sbjct 236 GAWDATSDIGLPVVVAEIADRDPDPCHALCVSGGQGCHRSRAIALARALTEAAQSRLTAI 295 Query 336 SGAREDL 342 SGAR+D+ Sbjct 296 SGARDDI 302 >gi|330468892|ref|YP_004406635.1| hypothetical protein VAB18032_24685 [Verrucosispora maris AB-18-032] gi|328811863|gb|AEB46035.1| hypothetical protein VAB18032_24685 [Verrucosispora maris AB-18-032] Length=408 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 128/385 (34%), Positives = 179/385 (47%), Gaps = 21/385 (5%) Query 54 TTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSV 113 T +R GT R +P ETW + P L GIT VADVT LD +G+P AVRP S L+V Sbjct 5 TDKTYRDGTDRAIAPAETWQRVLPRLPEMGITRVADVTGLDHIGVPVFMAVRPNSRGLTV 64 Query 114 SQGKAASYRAAQVSAVMESLEGWHAENVTADL----WSATARDLEADLTYDPAQLRHRPG 169 +QGK S AA+VSAVMES+E +HAE + A L W AR D + L G Sbjct 65 AQGKGLSVDAARVSAVMESIEAYHAERIEAPLLLGSWDELARHRR---LVDTSFLITAAG 121 Query 170 SLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDE 229 +L W+ T L++G W+P+ V + F + + GLASGN E Sbjct 122 EPLRRDRRLLWIEGTDLMSGEPVWLPFDLVHNDYTGASQAGQSPFAVTSNGLASGNHLLE 181 Query 230 ATLHALYEVMERHSVAAAVAG----ETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARI 285 AT HA+ EV+ER + A +A + V D V ++++ + AG + Sbjct 182 ATSHAICEVIERDAEALWLATPKQRQDELRVDPDTVDDPACRYVLDTLAAAGVAAACWDM 241 Query 286 DVWDGYYCFAAEL-----TSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGARE 340 G CF ++ S + G G H +AL RA+TEA QSR+T I+G+R+ Sbjct 242 TTDIGLPCFTVDIAEDPRVSISRVAVAQGQGCHPRREIALLRALTEAVQSRLTVIAGSRD 301 Query 341 DLPSAIYHRFGRVHTYAKARKTSLRLNRAR---PTPWRVPDVDSLPELVASAATAVANRS 397 D ++Y R + A +T N R P R D S E + A+ Sbjct 302 DFYRSLYARANDLDNREAAWRTCAAGNAPRHFTDVPTR--DNGSFQEDIEHELAALRQAG 359 Query 398 GTEPLAVVCDFADACVPVVKVLAPG 422 TE + V + VV+V+ PG Sbjct 360 ITEAIQVPLGGEQLGISVVRVMLPG 384 >gi|89054752|ref|YP_510203.1| hypothetical protein Jann_2261 [Jannaschia sp. CCS1] gi|88864301|gb|ABD55178.1| protein of unknown function DUF181 [Jannaschia sp. CCS1] Length=396 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 114/317 (36%), Positives = 150/317 (48%), Gaps = 22/317 (6%) Query 46 RVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVR 105 R + P +IA + HR P+ T+ L+ GIT VAD+T LD +G+P QAVR Sbjct 5 RASDAGSPGSIARKTWAHRTCQPEFTYRRLRRVAERVGITRVADITDLDRVGLPVFQAVR 64 Query 106 PASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLR 165 P +LSVSQGK + AA+VSA+ME++E WHAE AT R L DP QL Sbjct 65 PMGRSLSVSQGKGMTSMAARVSAMMEAVEIWHAEQDLPTTLRATIRSLGTRRAMDPNQLL 124 Query 166 HRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGN 225 + + W + LL G VP A N+ +PPM TTGLA GN Sbjct 125 MPGRDKVCEDLPIVWCPSLNLLDGADVLVPRDA--ANLDFTRAPDPPMLARSTTGLAGGN 182 Query 226 CYDEATLHALYEVMER------HSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDD 279 DEA A+ EV+ER + A + + A A +E IR AG Sbjct 183 TRDEARASAIAEVIERACQREFQRLPPASRAQRRLDPTCLASAHRGLADPIERIRSAG-- 240 Query 280 VDLARIDVWDGYYCFAAELTSATL-EVTFG--------GFGLHHDPNVALSRAITEAAQS 330 +D++D F A + E T G G G H DP A+ RA+TEAAQ+ Sbjct 241 ---LHLDIFDMTNRFDVPAIRAVIYETTAGKPVAWPCLGHGAHLDPVTAVVRALTEAAQA 297 Query 331 RITAISGAREDLPSAIY 347 R+T ISG R+D+ Y Sbjct 298 RLTGISGNRDDISPGHY 314 >gi|262199465|ref|YP_003270674.1| hypothetical protein Hoch_6310 [Haliangium ochraceum DSM 14365] gi|262082812|gb|ACY18781.1| protein of unknown function DUF181 [Haliangium ochraceum DSM 14365] Length=443 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 135/407 (34%), Positives = 194/407 (48%), Gaps = 46/407 (11%) Query 45 SRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAV 104 S + + D T +HGTHR+ +P+ T ++P +A GIT +A+VT LD +G+P V A Sbjct 25 SELRAAIDDTRKGFKHGTHRLIAPERTLARVRPHMAAMGITRLAEVTGLDRVGVPVVMAC 84 Query 105 RPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADL-TYDPAQ 163 RP + +L+VSQGK S AAQ S +ME +E +HAE++ A L T +L D Sbjct 85 RPNARSLAVSQGKGLSAIAAQASGLMECVELYHAEHIVAPLLFTTLAELRGSFAVVDVRA 144 Query 164 LRH---RPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPM------F 214 L RP S + + W+ L+ GR VP+ V + + PM F Sbjct 145 LPRSSARPLSEHQRSL---WIQGVDLMNGRPRLVPYEIVHAD------YTLPMPPGSGAF 195 Query 215 EMDTTGLASGNCYDEATLHALYEVMER--HSVAAAVAG-ETMFEVPTDDVAGSDSAHLVE 271 T GLASGN EA H L EV+ER H++ + G + D V A ++E Sbjct 196 VSSTNGLASGNHLFEAVCHGLCEVVERDAHTLWSLTPGARAHTRIAPDSVDDDACAQVLE 255 Query 272 MIRDAGDDVDLARIDVWD--------GYYCFAAELTSATLEVT--FGGFGLHHDPNVALS 321 R + LA + VWD ++C A+ S L G G DP +AL Sbjct 256 RFRASA----LA-VAVWDITSDVGIPAFHCVIADADSDPLRPLPPASGAGCAPDPAIALL 310 Query 322 RAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVP---- 377 RA+TEAAQSR+T I+G+R+D+ Y R H A LR R P R Sbjct 311 RALTEAAQSRLTHIAGSRDDMSVLAYR---RAHDQG-AHTHLLRELREAPPTRRFDQVSG 366 Query 378 -DVDSLPELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLAPGL 423 D DS+ E ++ A + + + + +AV +PV +V+ PGL Sbjct 367 YDSDSVAEDLSWALSRLRSVGIRQVVAVDLTLPAFNIPVARVVIPGL 413 >gi|288960709|ref|YP_003451049.1| hypothetical protein AZL_a09740 [Azospirillum sp. B510] gi|288913017|dbj|BAI74505.1| hypothetical protein AZL_a09740 [Azospirillum sp. B510] Length=398 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 137/396 (35%), Positives = 191/396 (49%), Gaps = 47/396 (11%) Query 55 TIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVS 114 T+ H G R+ SP+ET + P L G+T VAD+T LD +GIPT AVRP + + V+ Sbjct 10 TVRHAEGAQRLVSPEETLARVIPHLPTIGVTRVADITGLDRIGIPTFCAVRPLARLVQVT 69 Query 115 QGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEAD-LTYDPAQL--RHRPGSL 171 GK + AA+VSA+ME+LE HAE+ A A+ +L A+ + PAQ + PG Sbjct 70 NGKGLTPIAARVSAIMEALEHAHAEDPPAAPRRASMAELTAERAAFLPAQALPNYVPGLH 129 Query 172 YHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEAT 231 ++L W+ A +L VLV + EP + T GLASGN EAT Sbjct 130 LDDHLRLPWLEARSLGPADS----GATVLVPACSAVPVEPLHAMVSTNGLASGNHIVEAT 185 Query 232 LHALYEVMERHSVA--------AAVAGETMFEV------PTDDVAGSDSAHLVEMIRDAG 277 LHALYE++ER +V +V G M ++ P ++AG +A VE++ Sbjct 186 LHALYELIERDAVTRFSRAGLRKSVDGACMVDLRRLPPGPVAELAGRVAAAGVELV---- 241 Query 278 DDVDLARI-------DVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQS 330 L R+ +W + A+ + + + G+G H P VA RAITEAAQS Sbjct 242 ----LIRVASTGPATTMWAVFLDPLADQACSRVNM---GYGCHLSPTVAAVRAITEAAQS 294 Query 331 RITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPW-RVPDVDS--LPELVA 387 R+T I GAREDL + Y + T A R R W +PD S L + Sbjct 295 RLTYIHGAREDLSADSY-----ILTPAHERLARFFTGRRGELAWDELPDRSSGDLGRDLD 349 Query 388 SAATAVANRSGTEPLAVVCDFADACVPVVKVLAPGL 423 + +A L V A VPVVK++ PGL Sbjct 350 LVLSGLAGAGFGRVLRVDLTRAAVGVPVVKLIVPGL 385 >gi|163746794|ref|ZP_02154151.1| hypothetical protein OIHEL45_15364 [Oceanibulbus indolifex HEL-45] gi|161379908|gb|EDQ04320.1| hypothetical protein OIHEL45_15364 [Oceanibulbus indolifex HEL-45] Length=411 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 128/400 (32%), Positives = 190/400 (48%), Gaps = 40/400 (10%) Query 48 LGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPA 107 G + T R G HRI + +T + P GIT +A+VT LD +G+P V A+RP Sbjct 3 FGISGGTKKLLRDGLHRICTAQQTLDRILPIKHKFGITRIANVTGLDRVGLPVVLAIRPN 62 Query 108 SLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTY-DPAQLRH 166 + ++SVSQGK ++ A+VSA+ME++E WHAE+ ++ A DL + D +L Sbjct 63 ARSISVSQGKGSTLVLAKVSALMEAIEIWHAEHFDRPVFFARFDDLSEQHDFIDLTRLPE 122 Query 167 RPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPM-----FEMDTTGL 221 G ++ +L W+ A L++GR+ VP V + D P F T GL Sbjct 123 VRGRTRNSAERLHWVYAQELMSGRKVLVP-----VEMVQTDYTHPLFPGTGCFPSSTNGL 177 Query 222 ASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTD-DVAGSDSAHLVEMIR---DAG 277 ASGN EAT HA+ EV+ER ++A G + + D+ D +E +R +AG Sbjct 178 ASGNSELEATCHAICEVIERDALALWHHGSPDAQKSSQLDLNTVDDPICLEALRKFAEAG 237 Query 278 DDVDLARIDVWD--------GYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQ 329 VW+ + C + S T + G G H D +VAL RA+ EAAQ Sbjct 238 -----LECFVWNVTSDVAVASFMCVIFDRQSETDHLGLGS-GTHPDRSVALERALNEAAQ 291 Query 330 SRITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTP-WRVPDVDSLPELVAS 388 +R+ ISGAREDL Y GR + T + + P P + DV S + Sbjct 292 TRLNYISGAREDLSFEEYSASGRAQ-----KMTEFAVALSGPMPSLKFCDVPSSSNIDLE 346 Query 389 AATAVANR----SGTEPLAVV-CDFADACVPVVKVLAPGL 423 + + +G +AVV + + VV+V+ PGL Sbjct 347 SDLNFLKKCLWSAGINEVAVVGLGREEFRISVVRVIVPGL 386 >gi|336035262|gb|AEH81193.1| protein of unknown function DUF181 [Sinorhizobium meliloti SM11] Length=405 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 102/307 (34%), Positives = 150/307 (49%), Gaps = 30/307 (9%) Query 58 HRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGK 117 + GT R +P+ET + P + GI+ V DVT LD +GIPT AVRP + LSVS GK Sbjct 7 YSQGTQRTYNPEETLRRIAPAMRTCGISRVLDVTHLDRIGIPTYNAVRPNGMILSVSNGK 66 Query 118 AASYRAAQVSAVMESLEGWHAENVTADLW-----SATARDLEADLTYDPAQLRH------ 166 + AA VSA+MES+E HAE W + R+ + P + Sbjct 67 GGTKAAASVSAIMESIEVEHAEYPDTSAWHLAQSAKVLRNRGYSVVDAPTLISECLWPSD 126 Query 167 RPGSLYHA-GVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGN 225 G LY++ ++LDW+ ++ R +P + + V P + + GLASGN Sbjct 127 TYGGLYYSDDLRLDWVEGREIIESRPVLLPASTIYVRA-------PYVHYFTSNGLASGN 179 Query 226 CYDEATLHALYEVMERHSVA------AAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDD 279 ++EATLH + E++ER S A + + + + H E + AG + Sbjct 180 TWEEATLHGICELIERDSTARLLGRPEGMTTSRLLRIEPKSMP-EHLGHFSEKVAQAGIE 238 Query 280 VDL----ARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAI 335 + + + ID+ + F + + T GFG H P +A SRA+TEAAQSR+T I Sbjct 239 LFMFALPSAIDIHTFWAVFHCPGEPSFMLATSAGFGCHTSPQIAASRALTEAAQSRLTYI 298 Query 336 SGAREDL 342 GAREDL Sbjct 299 HGAREDL 305 >gi|13432020|sp|Q52871.1|YTF3_RHILT RecName: Full=UPF0142 protein in tfuA 3'region; AltName: Full=ORF3 gi|1439553|gb|AAB17514.1| ORF3 [Rhizobium leguminosarum bv. trifolii] Length=420 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 130/384 (34%), Positives = 177/384 (47%), Gaps = 38/384 (9%) Query 64 RITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASYRA 123 R +P +T+ A++P L GIT V +T LD L IP A RP S TLSV QGK A Sbjct 27 RAVTPAQTFAAIRPHLRDFGITRVGLLTALDVLNIPVAFATRPNSHTLSVFQGKGIDNEA 86 Query 124 AQVSAVMESLEGWHAENVTADLWSATARDLEAD----LTYD------PAQLRHRPGSLYH 173 A SA ME++E AE ADL AT + A+ + D P ++ RP Sbjct 87 AMTSAAMEAVETRIAEIAPADLTQATVESMRAERAAMIDLDNVARCAPDEIGSRP----- 141 Query 174 AGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLH 233 + W +L+G +VPW LV + R PP FE + GLASGN EA LH Sbjct 142 ----IPWCSGLDILSGSSVFVPWW--LVGLDHRG-ERPPGFEQSSDGLASGNTPSEAVLH 194 Query 234 ALYEVMERH--SVAAAVAGETMFEVPTDDVAGSDSAH--LVEMIRDAGDDVDLARIDVWD 289 L E++ER ++ + E + E D + D+ + + I AG + L + Sbjct 195 GLCELVERDAWALTQLKSPERLKESRIDPASFGDAVIDVMTDRITRAGMKLLLLDMTTDI 254 Query 290 GYYCFAAELTSATL--------EVTFGGFGLHHDPNVALSRAITEAAQSRITAISGARED 341 G F A + L GG G H DP A RAITEAAQSR+TAI+G+R+D Sbjct 255 GIPAFLAVIMPGNLSDRVDARWSHVCGGCGCHPDPVRAALRAITEAAQSRLTAIAGSRDD 314 Query 342 LPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEP 401 IY R R + + R RP R ++ E + A + +G E Sbjct 315 FSPRIYQRLDRSAAMQQVVELCEGDGRMRPFQPRHHRKATIQETIGHIADRLVA-TGIEQ 373 Query 402 LAVVCDFADACVP--VVKVLAPGL 423 + VV F +P VV+V+ PGL Sbjct 374 IVVV-PFPHPALPVSVVRVIVPGL 396 >gi|150378083|ref|YP_001314678.1| hypothetical protein Smed_6106 [Sinorhizobium medicae WSM419] gi|150032630|gb|ABR64745.1| protein of unknown function DUF181 [Sinorhizobium medicae WSM419] Length=405 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/305 (34%), Positives = 149/305 (49%), Gaps = 30/305 (9%) Query 60 HGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAA 119 GT R +P+ET + P + GI+ V DVT LD +GIPT AVRP + LSVS GK Sbjct 9 QGTQRTYNPEETLRRIAPAMRTCGISRVLDVTHLDRIGIPTYNAVRPNGMILSVSNGKGW 68 Query 120 SYRAAQVSAVMESLEGWHAENVTADLW-----SATARDLEADLTYDPAQLRH------RP 168 + AA VSA+MES+E HAE W + R+ + P + Sbjct 69 TKAAASVSAIMESIEVEHAEYPDTSAWHLAQSAKVLRNRGYSVVDAPTLISECLWPSDTY 128 Query 169 GSLYHA-GVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCY 227 G LY++ ++LDW+ ++ R +P + + V P + + GLASGN + Sbjct 129 GGLYYSDDLRLDWVEGREIIESRPVLLPASTIYVRA-------PYVHYFTSNGLASGNTW 181 Query 228 DEATLHALYEVMERHSVA------AAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVD 281 +EATLH + E++ER S A + + + + H E + AG ++ Sbjct 182 EEATLHGICELIERDSTARLLGRPEGMTTSRLLRIEPKSMP-EHLGHFSEKVAQAGIELF 240 Query 282 L----ARIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISG 337 + + ID+ + F + + T GFG H P +A SRA+TEAAQSR+T I G Sbjct 241 MFALPSAIDIHTFWAVFHCPGEPSFMLATSAGFGCHTSPQIAASRALTEAAQSRLTYIHG 300 Query 338 AREDL 342 AREDL Sbjct 301 AREDL 305 >gi|338732822|ref|YP_004671295.1| hypothetical protein SNE_A09270 [Simkania negevensis Z] gi|336482205|emb|CCB88804.1| UPF0142 protein in tfuA 3'region [Simkania negevensis Z] Length=434 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 118/390 (31%), Positives = 175/390 (45%), Gaps = 20/390 (5%) Query 49 GSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPAS 108 G++ + GTHRI SP+ETW + P + G++ VA+VT LD +GIP +RP + Sbjct 8 GNSYQAKKGYFKGTHRIVSPEETWEKIAPLTSQIGVSRVANVTGLDRIGIPVTAVIRPEA 67 Query 109 LTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPA-QLRHR 167 LTLS S GK + VS +MESLE AE +L + P +L R Sbjct 68 LTLSTSSGKGLDLCTSLVSGLMESLELHCAEEADLSYLHLPYHELSKRVKTIPIDRLPLR 127 Query 168 PGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVN--VATRDCWEPPMFEMDTTGLASGN 225 SL+ W + L VP +V+ N + ++ E FEM + GLASGN Sbjct 128 KNSLFRPDWPERWTIGWDLFNQEEVAVPLLSVIHNYKIVRQEPSELHSFEMTSNGLASGN 187 Query 226 CYDEATLHALYEVMER-----HSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDV 280 + EA +YE++ER H A + V + + S ++E ++ A + Sbjct 188 HFLEALAAGIYELIERDAITCHMFAFETVKAALPRVCLETIRFSKVQQVIEKLKWARFQL 247 Query 281 DLARIDVWDGYYCFAAELTSATLEVT--FGGFGLHHDPNVALSRAITEAAQSRITAISGA 338 L + F A L T+ T G+G H DP VA+ RAITEA Q I+G+ Sbjct 248 LLYDCTIDTEVPVFMATLYDETMRHTRLSQGYGAHLDPEVAMIRAITEAVQGSTIGIAGS 307 Query 339 REDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDS-----LPELVASAATAV 393 R+D I+ + + + +T L +P V ++S L E V + Sbjct 308 RDD----IFFSQLKQGKQSDSEQTITALEN-QPATVDVSQLESVATSTLEEDVTLLMEKI 362 Query 394 ANRSGTEPLAVVCDFADACVPVVKVLAPGL 423 N T+ L D V V++V+APGL Sbjct 363 RNVGITQLLVFDLSKEDLGVSVLRVIAPGL 392 >gi|209546417|ref|YP_002278307.1| hypothetical protein Rleg2_6037 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539274|gb|ACI59207.1| protein of unknown function DUF181 [Rhizobium leguminosarum bv. trifolii WSM2304] Length=420 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 132/395 (34%), Positives = 178/395 (46%), Gaps = 60/395 (15%) Query 64 RITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASYRA 123 R +P +T A++P L GIT V +T LD L IP A RP S TLSV QGK A Sbjct 27 RAVTPAQTLAAIRPHLREFGITRVGLLTALDVLNIPVAFATRPNSHTLSVFQGKGIDNDA 86 Query 124 AQVSAVMESLEGWHAENVTADLWSATARDLEAD----LTYDPAQLRHRPGSLYHAGVKLD 179 A SA ME++E AE ADL AT + A+ + D R P + + Sbjct 87 AMTSAAMEAIETRIAEIPPADLTEATVAGMRAENAAMIDLDNVA-RCAPDEIGSGPIP-- 143 Query 180 WMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVM 239 W +L+G +VPW LV + R PP FE + GLASGN EA LH L E++ Sbjct 144 WCSGLDILSGSSAFVPWW--LVGLDHRG-ERPPGFEQSSDGLASGNTPSEAVLHGLCELV 200 Query 240 ERHS----------------VAAAVAGETMFEVPTDDVAGSD-SAHLVEMIRDAGDDVDL 282 ER + + A G+ + +V TD +A + L++M D G L Sbjct 201 ERDAWALTQLKSPERLKESRIDPASFGDAVIDVMTDRIARAGMRLLLLDMTTDIGVPAFL 260 Query 283 A---------RIDVWDGYYCFAAELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRIT 333 A R+D + C GG G H DP A RAITEAAQSR+T Sbjct 261 AVIMPGNLSDRVDARWAHVC--------------GGCGCHPDPVRAALRAITEAAQSRLT 306 Query 334 AISGAREDLPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAV 393 AI+G+R+D +Y R + + + R R R S P + + Sbjct 307 AIAGSRDDFSPRVYQRLDQSAAMQQVVELCEGGGRMRAFQPR----QSRPATIQETIGHI 362 Query 394 ANR---SGTEPLAVVCDFADACVP--VVKVLAPGL 423 A+R +G E + VV FA +P VV+V+ PGL Sbjct 363 ADRLAATGIEQIVVV-PFAHRALPVSVVRVIVPGL 396 >gi|326795593|ref|YP_004313413.1| YcaO-domain protein [Marinomonas mediterranea MMB-1] gi|326546357|gb|ADZ91577.1| YcaO-domain protein [Marinomonas mediterranea MMB-1] Length=414 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 118/384 (31%), Positives = 184/384 (48%), Gaps = 23/384 (5%) Query 57 AHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQG 116 A+ GTHR SP ET + P L GIT +ADVT LD +G+P + A RP + +SVSQG Sbjct 8 AYTTGTHRTVSPKETLEKITPLLLKMGITRLADVTGLDDIGVPVITACRPNAKAISVSQG 67 Query 117 KAASYRAAQVSAVMESLEGWHAENVTADLWSATARDL-EADLTYDPAQLRHRPGSLYHAG 175 K S AA+ SA ME++E WHAEN+ + L E + D L ++ Sbjct 68 KGVSVDAAKASAAMEAIETWHAENIDLPTRFCSFNALKENHVVVDLDTLPKMDVKPFNPD 127 Query 176 VKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHAL 235 + W+ A L +VP+ + F++ T GLASGN +EA HAL Sbjct 128 ERRLWIEAQDLNREHSYYVPYDLAHCDFTLPLPQGSGCFQLSTNGLASGNTVNEAASHAL 187 Query 236 YEVMERHSVA--AAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWD---- 289 E++ER ++ + ++ E + D +D + + + ++ D+A + VWD Sbjct 188 CELIERDAMTLWSFLSSEEQGKRKVDLSTITDPT--IGGLLNKLEEADVA-VSVWDATSD 244 Query 290 -GYYCFAAELTSATLE-----VTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLP 343 G F + + T + G G H D +VA+ RAITEA Q+R+T ISG+R+D Sbjct 245 IGIATFVCTIINKTESQYRPLYSMSGSGTHVDKHVAIMRAITEAVQARLTLISGSRDDAS 304 Query 344 SAIYHRFGRVHTYAKARKTSLR----LNRARPTPWRVPDVDSLPELVASAATAVANRSGT 399 IY ++ + RK + ++ + W D++ E + +A + Sbjct 305 IKIYETRQQMEYQRRIRKELMETPSFVDFNKIDSWI---FDTIEEDLELQIAKLAAQGLP 361 Query 400 EPLAVVCDFADACVPVVKVLAPGL 423 PL + + +PVVKV++PGL Sbjct 362 CPLFIDLTKTEFDIPVVKVISPGL 385 >gi|307352253|ref|YP_003893304.1| methanogenesis marker protein 1 [Methanoplanus petrolearius DSM 11571] gi|307155486|gb|ADN34866.1| methanogenesis marker protein 1 [Methanoplanus petrolearius DSM 11571] Length=396 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/311 (33%), Positives = 154/311 (50%), Gaps = 27/311 (8%) Query 61 GTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASL--TLSVSQGKA 118 GTHR+T+P++T ++P + G+ V D+T LD LGIP A RP + + GK Sbjct 20 GTHRVTAPEKTLEKIKPLMPEIGVVEVEDITGLDRLGIPVYSASRPGAKPGATRMHAGKG 79 Query 119 ASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQL-RHRPGSLYHAGVK 177 A+VSA+ME++E + AE + + + DPA L RP +G K Sbjct 80 TRPVHAEVSAMMEAIERYSAEYRGESMIHESFDGMGPATAVDPADLILPRP---LESGEK 136 Query 178 LDWMVATTLLTGRRTWVPWTAVL-----VNVATRDCWEPPMFEMDTTGLASGNCYDEATL 232 L W + ++ +VP AV V +A + +F DT GLASGN +EA L Sbjct 137 LHWTPSWDMMNEEEIYVPSNAVFHPYDPVGMAQQ------LFRSDTNGLASGNVIEEAIL 190 Query 233 HALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYY 292 HA++EV+ER +++ A +M + D G + L+++ D G + L ID G Sbjct 191 HAIFEVIERDALSDAENARSMGKKIIVDKEGP-AKELLDIFEDNGVKIHLWLIDAKTGVP 249 Query 293 CFAA---ELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGARED------LP 343 AA + + + G G H +P +A+ RA+TE AQSR +++ G RED + Sbjct 250 TVAAGGDDTLTKDPSLLVMGSGTHLNPEIAVLRALTEVAQSRGSSLKGGREDPKRRMLIE 309 Query 344 SAIYHRFGRVH 354 A Y R R++ Sbjct 310 KAGYERLKRIN 320 >gi|330508549|ref|YP_004384977.1| putative methanogenesis marker protein 1 [Methanosaeta concilii GP6] gi|328929357|gb|AEB69159.1| putative methanogenesis marker protein 1 [Methanosaeta concilii GP6] Length=406 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 132/398 (34%), Positives = 190/398 (48%), Gaps = 35/398 (8%) Query 53 PTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASL--T 110 P ++ THR SP+ET ++ L AGIT VAD+T LD +GIP ++RP + Sbjct 5 PCIKRYKEDTHRAASPEETEKRIEAKLPAAGITRVADITNLDRIGIPVFSSIRPMADRGA 64 Query 111 LSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRHRPGS 170 +SV GK A+ A+VSA+ME LE + E +L A L+A+ +P L + Sbjct 65 VSVYNGKGATPVEARVSAMMEGLERYSGEVRDRELTIARYSSLKAE-ALNPVDLILPTEA 123 Query 171 LYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEA 230 + A ++ W++ ++ VP AV +++ +F +T+GLASGN +EA Sbjct 124 VADADAEIPWVLGWDIMNDEEIQVPANAVFHPLSSD---YKRLFRTNTSGLASGNMMEEA 180 Query 231 TLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDV--- 287 H L EV+ER + A A M + + DV + L+E R A +VD+ D+ Sbjct 181 IFHGLAEVIERDAWAIVEATRHMGPLIS-DVVDEQAQGLLE--RFAAAEVDVYLRDITSD 237 Query 288 WDGYYCFAA----ELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLP 343 D C AA +L TL T G G H VA+ RA+TE AQSR+T I GARED Sbjct 238 IDIPTCAAAADDIKLRDPTLLTT--GMGTHTSARVAVLRALTEVAQSRLTQIHGAREDTV 295 Query 344 SAIYHRFGRVHTYAKARKTSLRLNRA---RPTPWRVPDVDSLPE----LVASAATAVANR 396 +A F R Y + + RLNR D+ S L + Sbjct 296 TA---DFRRQIGYERTK----RLNRYWFDIGEKKSFADIQSFESNDFLLDIKFMISKLEE 348 Query 397 SGTEPLAVVCDFA--DACVPVVKVLAPGLVLSSASPMR 432 +G E AVV D + VPVV+V+ PGL ++ R Sbjct 349 AGLER-AVVVDLTREEIGVPVVRVIVPGLEIAGVDRER 385 >gi|116255806|ref|YP_771639.1| hypothetical protein pRL110605 [Rhizobium leguminosarum bv. viciae 3841] gi|115260454|emb|CAK03558.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length=420 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 128/381 (34%), Positives = 174/381 (46%), Gaps = 32/381 (8%) Query 64 RITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASYRA 123 R +P +T A++P L GIT V +T LD L IP A RP S TLSV QGK A Sbjct 27 RAVTPAQTLAAIRPHLREFGITRVGLLTALDVLNIPVAFATRPNSHTLSVFQGKGIDNDA 86 Query 124 AQVSAVMESLEGWHAENVTADLWSATARDLEAD----LTYDPAQLRHRPGSLYHAGVKLD 179 A SA ME++E AE ADL AT + A+ + D R P + + + Sbjct 87 AMTSAAMEAVETRIAEIAPADLTQATVDSMRAEHAAMIDLDNVA-RCAPDEIGSSPIP-- 143 Query 180 WMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVM 239 W +L+G +VPW LV + R P FE + GLASGN EA LH L E++ Sbjct 144 WCTGLDILSGSSVFVPWW--LVGLDHRG-ERPAGFEQSSDGLASGNTPSEAVLHGLCELV 200 Query 240 ERH--SVAAAVAGETMFEVPTDDVAGSDSAH--LVEMIRDAGDDVDLARIDVWDGYYCFA 295 ER ++ + E + E D + D+ + + I AG + L + G F Sbjct 201 ERDAWALTQLKSPERLKESRIDPASFGDAVIDVMTDRITRAGMKLLLLDMTTDIGVPAFL 260 Query 296 AELTSATL--------EVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIY 347 A + L GG G H DP A RAITEAAQSR+TAI+G+R+D IY Sbjct 261 AVIMPGNLSDRVDARWSHVCGGCGCHPDPVRAALRAITEAAQSRLTAIAGSRDDFSPRIY 320 Query 348 HRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAVANR---SGTEPLAV 404 R R + + R R R P + +A+R +G E + V Sbjct 321 QRLDRSAAMQQVVELCEGDGRMRSFQAR----HRRPATIQDTIGHIADRLTATGIEQIVV 376 Query 405 VCDFADACVP--VVKVLAPGL 423 V F+ +P VV+V+ PGL Sbjct 377 V-PFSHPALPISVVRVIVPGL 396 >gi|300863880|ref|ZP_07108801.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300338123|emb|CBN53947.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length=385 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 102/307 (34%), Positives = 159/307 (52%), Gaps = 27/307 (8%) Query 52 DPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTL 111 D T A+ GTHR+ SP++T + P+L AGIT AD+T LD +GIP +++P + Sbjct 2 DVLTKAYAIGTHRLISPEQTLANIHPYLPAAGITRCADITGLDRIGIPVYCSIKPGGRLV 61 Query 112 SVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLE-ADLTYD-----PAQLR 165 + GK S AA+VSA+ME++E +HAEN + +S++ D+ +DL+ P L Sbjct 62 QIHNGKGLSQMAAKVSALMEAIEVFHAENPYCNFYSSSFNDINVSDLSIISPNILPLYLS 121 Query 166 HRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGN 225 H + + + +DW+ A L +P +AV + P ++ + GLASGN Sbjct 122 H---NFFSKDLIIDWIKAENLQKNESVLLPASAVYLR-------SPSLYGFSSNGLASGN 171 Query 226 CYDEATLHALYEVMERHSVAA-AVAGETMFE----VPTDDVAGSDSAHLVEMIRDAGDDV 280 EATLH LYE++ER ++A ++ G+ + + + V L+ I+ A + Sbjct 172 HIVEATLHGLYELIERDAIAGVSINGKIDIKSCQIIDLNTVDDELICSLIYRIKSANFKL 231 Query 281 DLARIDVWDGYYCFAAELTSAT-----LEVTFGGFGLHHDPNVALSRAITEAAQSRITAI 335 L + F A + + V F G+G H +VA +RAITEAAQSR+T I Sbjct 232 VLIWLKSCISVNTFWAIILDKNPLTPAIMVNF-GYGTHLSVSVAAARAITEAAQSRLTFI 290 Query 336 SGAREDL 342 G E+L Sbjct 291 YGVSEEL 297 >gi|336120687|ref|YP_004575473.1| hypothetical protein MLP_50560 [Microlunatus phosphovorus NM-1] gi|334688485|dbj|BAK38070.1| hypothetical protein MLP_50560 [Microlunatus phosphovorus NM-1] Length=436 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 132/400 (33%), Positives = 187/400 (47%), Gaps = 30/400 (7%) Query 45 SRVLGSADPTTIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAV 104 SR+L HR GTHR T P T + GIT +ADVT LD +G+P Sbjct 11 SRLLPGPTAVPKTHRSGTHRTTDPAVTVARVWAHRRTMGITRIADVTGLDRVGVPVTMVT 70 Query 105 RPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADL-TYDPAQ 163 RP + +L+V+QGK + AA+ S +ME+ E +HAE+ L ++ R L +L T D + Sbjct 71 RPNARSLAVNQGKGLTLDAARASGLMEAAETFHAEHPRLPLRLSSWRHLREELETVDCHR 130 Query 164 LRHRPGSLYHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLAS 223 L P + L W L TG +P+ V + T F + GLAS Sbjct 131 LPRHPYGSFDDDRMLLWASGVDLRTGAPVQLPYELVHTHYTTLALPGAGAFLASSNGLAS 190 Query 224 GNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHL-VEMIRDAGDDVDL 282 GN EA LH LYEV+ER + ++E+ D A D+ + + + D G L Sbjct 191 GNHPLEAVLHGLYEVVERDAT-------VLWEL--SDTAQQDATAVDLRTVTDPGCRGVL 241 Query 283 AR-------IDVWD-----GYYCFAAELTSAT----LEVTFGGFGLHHDPNVALSRAITE 326 R + W+ G FA E+ + G G HHD VAL+RA+TE Sbjct 242 DRFAEAGLVVACWEQTSDIGIAVFAVEVIDSADGMDGAPAAAGMGAHHDATVALARALTE 301 Query 327 AAQSRITAISGAREDLPSAIYHRFGRVHTYAKARKTSLRLN-RARPTPWRVPDV--DSLP 383 AAQSR+TAI+G+R+D P + Y T A R R+N +A + + P D+L Sbjct 302 AAQSRLTAIAGSRDDQPPSAYAVAHDPATLALHRAELQRVNAQATRSFAQAPHAVRDTLD 361 Query 384 ELVASAATAVANRSGTEPLAVVCDFADACVPVVKVLAPGL 423 E +A A+A +AV D + VV+V+ PGL Sbjct 362 EDLAQLLDALAAAGLDHVVAVDLSRTDLGIDVVRVVVPGL 401 >gi|21227560|ref|NP_633482.1| hypothetical protein MM_1458 [Methanosarcina mazei Go1] gi|20905941|gb|AAM31154.1| conserved protein [Methanosarcina mazei Go1] Length=424 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 117/399 (30%), Positives = 190/399 (48%), Gaps = 43/399 (10%) Query 55 TIAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASL--TLS 112 ++++ GT R+ T + + G+T +AD+T LD LG+P ++RP++ +S Sbjct 9 SLSYIEGTQRVYDEATTLENTKNQIKKIGVTRIADITNLDRLGVPIFSSIRPSAAPGAIS 68 Query 113 VSQGKAASYRAAQVSAVMESLEGWHAE------NVTADLWSATARDLEADLTYDPAQLRH 166 + GK ++ + A++SA+MES E AE N+ D+ SA A +E+ L + Sbjct 69 IYSGKGSTEQRARISAIMESFERCLAERPGLNANIAGDI-SAPAL-VESYLNARENYVTL 126 Query 167 RPGSL-----YHAGVKLDWMVATTLLTGRRTWVPWTAVLVNVAT-RDCWEPPMFEMDTTG 220 PGSL Y+ L+W+ A LL +V AV + C + +F +T G Sbjct 127 DPGSLLLSQPYNPSSLLEWVGAYDLLNKEEVFVSANAVYHPYDSPGQCQK--LFLSNTNG 184 Query 221 LASGNCYDEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEM---IRDAG 277 LASGN +EA LH L EV+ER +++ A + ++ + V + +L E+ +D+G Sbjct 185 LASGNVLEEAILHGLLEVIERDAISTA---QFTRDLGKEIVLTEEDGYLYEISRKFKDSG 241 Query 278 DDVDLARIDVWDGYYCFAAELTSATLE---VTFGGFGLHHDPNVALSRAITEAAQSRITA 334 D+ + + G A L+ + G G H P +A++RAITEAAQSR+ Sbjct 242 IDLKIWLVPTDTGIPTIIAATDDVKLKDPALLVMGAGSHLKPEIAVARAITEAAQSRVVQ 301 Query 335 ISGARED------LPSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVP--DVDSLPELV 386 I GARED + S Y R R++ + + L+ + R P ++D + E + Sbjct 302 IQGAREDTDREGFIRSVGYDRMKRLNWFWFEEGEKISLSEVQDISKRSPAENIDVILEKL 361 Query 387 ASAATAVANRSGTEPLAVVCDFADACVPVVKVLAPGLVL 425 V L V + VPVV+V+ PG L Sbjct 362 KGLTEKV--------LVVDLSREEVAVPVVRVIIPGFEL 392 >gi|325958165|ref|YP_004289631.1| methanogenesis marker protein 1 [Methanobacterium sp. AL-21] gi|325329597|gb|ADZ08659.1| methanogenesis marker protein 1 [Methanobacterium sp. AL-21] Length=399 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 112/387 (29%), Positives = 180/387 (47%), Gaps = 23/387 (5%) Query 62 THRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRP--ASLTLSVSQGKAA 119 THR +P++T ++P L AG+T VA++T LD +GIP A+RP A +S+ GK A Sbjct 13 THRAVAPEKTIENVEPKLRAAGVTRVAEITHLDRIGIPVYSAIRPGAAEGAVSIYAGKGA 72 Query 120 SYRAAQVSAVMESLEGWHAENVTADLWSATARDL-EADL--TYDPAQLRHRPGSLYHAGV 176 + A+ SA+MES E + AE D + + E+DL DP +L Sbjct 73 TKSQAKASAMMESFERFSAEITDLDRKNFVRGNFEESDLHNYLDPDKLILPKLGFNSKTE 132 Query 177 KLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALY 236 L+W+ A + + +VP AV + + + +F+ +T GLASGN +EA H + Sbjct 133 GLEWVKAVDITNDKTVFVPANAVYHPYDSENISK--LFQSNTNGLASGNLIEEAIFHGMM 190 Query 237 EVMERHSVAAAVAGET-MFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFA 295 EV+ER + + A E+ + + +++ + + AG V L + A Sbjct 191 EVVERDAWSIFEARHKPKPEINLETIENPLINNILHLFKKAGIHVKLVNLTADVEITTIA 250 Query 296 AELTSATLE---VTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAI------ 346 A L+ + G G H DP VA+ RA+TE AQSR T I G RED A+ Sbjct 251 AVSDDTVLKDPALLTLGVGTHLDPEVAVIRALTEVAQSRATQIHGTREDTVRAVFMRKAG 310 Query 347 YHRFGRVHTY-AKARKTSLRLNRARPTPWRVPDVDSLPELVASAATAVANRSGTEPLAVV 405 Y R R++ + ++ + L R + + E + ++ + + + L V Sbjct 311 YERMKRINKHWFGESQSEVDLKEIRNYSGK-----TFKEDIETSQKLLGKQGFKDILYVD 365 Query 406 CDFADACVPVVKVLAPGLVLSSASPMR 432 + +PVV+VL P + L S R Sbjct 366 LTRQEIQIPVVRVLIPEMELFSVDVNR 392 >gi|54292916|ref|YP_122303.1| hypothetical protein plpl0009 [Legionella pneumophila str. Lens] gi|53755824|emb|CAH17328.1| hypothetical protein plpl0009 [Legionella pneumophila str. Lens] Length=353 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/299 (32%), Positives = 146/299 (49%), Gaps = 26/299 (8%) Query 56 IAHRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLTLSVSQ 115 I H + R ET L F AGIT +AD+T LD +P A+RP + +L+ SQ Sbjct 3 IRHAETSFRARHFSETLNLLNQFKKLAGITRLADLTHLDYTSLPVYTAIRPRAKSLTTSQ 62 Query 116 GKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDL-EADLTYDPAQLRHRPGSLYHA 174 GK + AA+ SA+MES+E + AE + + + + +L +++ + P + Sbjct 63 GKGLTKEAAKCSALMESIEVYFAEEIIPQVTNKSELELTQSNNLFIPINQLANSVRFTNP 122 Query 175 GVKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHA 234 ++W+ A + +G+ VP+ +N + ++ DTTGLA GN Y EA LH Sbjct 123 SQPINWVYADLVFSGKTILVPFAEYSLNSYLPEVL---IYSPDTTGLAGGNNYKEALLHG 179 Query 235 LYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYY-- 292 + EV+ER A E F +++LVE + D I + YY Sbjct 180 ILEVIERQD--AQQITEIAFV----------NSNLVENLSIRFD----CFITYQENYYRV 223 Query 293 -CFAAELTSAT---LEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIY 347 F L S ++ F G G H + +AL+RA+TEA QSR+T I+G+R+DL + Y Sbjct 224 PSFEVLLKSKNPFENQILFKGSGSHLNKKIALNRALTEAIQSRVTTIAGSRDDLINTKY 282 >gi|147919709|ref|YP_686545.1| hypothetical protein RCIX2079 [uncultured methanogenic archaeon RC-I] gi|110621941|emb|CAJ37219.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length=415 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 128/391 (33%), Positives = 175/391 (45%), Gaps = 54/391 (13%) Query 62 THRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLT--LSVSQGKAA 119 THR+ P+ET ++ L G+T VA+++ LD +GIP A+RP S +SV GK A Sbjct 16 THRVVPPEETLNRVEKLLPDIGVTRVAEISGLDRIGIPVYSAIRPGSEKGAISVYAGKGA 75 Query 120 SYRAAQVSAVMESLEGW----HAENVTADLWSATARDLEADLTYDPAQLRHRPGSLYHAG 175 + A+VS +MES+E + H ++ L E DP L PG L G Sbjct 76 TPVEAKVSVIMESIERYSSEMHKQDKKKVLVGTYEEVSEKHAAVDPQSL-ILPGRLL-PG 133 Query 176 VKLDWMVATTLLTGRRTWVPWTAVL---VNVATRDCWEPPMFEMDTTGLASGNCYDEATL 232 KL+W L+ + +P AV + A R +F +T GLASGN +EA Sbjct 134 TKLEWFDGYDLIGKKDVKLPCNAVFHPYTSAAVR------LFRSNTNGLASGNTMEEAIF 187 Query 233 HALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYY 292 HAL EV+ER +++ A A + + D + L A DV L + G Sbjct 188 HALMEVVERDALSLAEATRNTGQAISIDEDDGIAYDLYAKFGKANIDVKLWYLPTDTGIP 247 Query 293 CFAA-----ELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDLP---- 343 A EL L V G G H D +A RA+TE AQSR T I G RED Sbjct 248 TVLAAADDKELLDPALLVM--GVGTHLDARIATLRALTEVAQSRATQIHGGREDTDRERI 305 Query 344 --SAIYHRFGRV--HTYAKARKT-SLRLNRARPTPWRVPDVDSLPELVASAATAVANRS- 397 S Y R R+ H YA+A +T SL+ SLP+L ++ +S Sbjct 306 TRSIGYERMKRLNKHWYAEAAETVSLK---------------SLPDLSTTSHKGDIEKSI 350 Query 398 ----GTEPLAVVCDFADAC-VPVVKVLAPGL 423 G +V D + VPVV+V PGL Sbjct 351 RQLKGIAQGVIVTDLTRSIGVPVVRVTVPGL 381 >gi|88601828|ref|YP_502006.1| hypothetical protein Mhun_0527 [Methanospirillum hungatei JF-1] gi|88187290|gb|ABD40287.1| protein of unknown function DUF181 [Methanospirillum hungatei JF-1] Length=406 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 132/402 (33%), Positives = 185/402 (47%), Gaps = 53/402 (13%) Query 58 HRHGTHRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRP--ASLTLSVSQ 115 ++ THR SP+ET+ A+ PAGIT VAD+T LD +GIP +RP A ++V Sbjct 10 YQKETHRTRSPEETYEAVHDLTGPAGITRVADITGLDRIGIPVFSCIRPVAAEGAITVYN 69 Query 116 GKAASYRAAQVSAVMESLEGWHAENVTADLWSATARDLEADLTYDPAQLRH---RPGSLY 172 GK A+ AA+VSA+ME LE + AE D T +TYD ++ RP +L Sbjct 70 GKGATPIAARVSAIMEGLERYSAE--VHDRSPQT-------MTYDQIRMEKNAIRPDTLI 120 Query 173 HAGVK-----LDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPPMFEMDTTGLASGNCY 227 + W +L WVP AV V +F T G+ASGN Y Sbjct 121 LPEYAEPEWPIPWWQGYDILRNEEVWVPAHAVFHPVPR---IMGKLFRTSTNGIASGNTY 177 Query 228 DEATLHALYEVMERHSVAAAVAGETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDV 287 +EA H+L E++ER + + A + T DV + L++ ++AG DV L I Sbjct 178 EEAVFHSLCELIERDAWSLVEASQNAGPAIT-DVTHPVARELLDKFKEAGVDVILRDITS 236 Query 288 WDGYYCFAA-----ELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGAREDL 342 G AA +L TL G G H +A+ RA+TE AQSR T I GARED Sbjct 237 DLGIPTVAAVSDDLQLRDPTLLCI--GMGSHLCSEIAILRALTEVAQSRATQIHGAREDT 294 Query 343 PSAIYHRFGRVHTYAKARKTSLRLNRARPTPWRVPDVDSLPELVASAAT--------AVA 394 + H +V Y +A+ RLN+ W + + + + S T V Sbjct 295 KTT--HFLSKV-GYDRAK----RLNKK----WFTTEAEIAYKDMPSYHTDDFLDDIHIVL 343 Query 395 NRSGTEPL--AVVCDFA--DACVPVVKVLAPGLVLSSASPMR 432 +R L +V D + VPVV+V+ PGL + P R Sbjct 344 DRLKAAGLDRVIVHDLTRPEIGVPVVRVIVPGLEHYAMDPER 385 >gi|116255454|ref|YP_771287.1| hypothetical protein pRL110255 [Rhizobium leguminosarum bv. viciae 3841] gi|115260102|emb|CAK03202.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length=385 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 113/361 (32%), Positives = 165/361 (46%), Gaps = 41/361 (11%) Query 83 GITGVADVTWLDCLGIPTVQAVRPASLTLSVSQGKAASYRAAQVSAVMESLEGWHAENVT 142 GIT + +T LD +GIP Q VRP S ++SV+QGK ++ A +SA+MESLEGW +E + Sbjct 36 GITRLGSITELDRIGIPVAQVVRPLSRSVSVNQGKGLTHGQAAISALMESLEGWSSERIP 95 Query 143 ADLWSATARDLEADLTYDPAQLRHRPGSLYHAGV--------KLDWMVATTLLTGRRTWV 194 + + A R G Y + + L W+ L + R V Sbjct 96 TE-------------RVELAGFRSMNGQGYWSHLADYGERDETLAWIEGWDLFSSRAVPV 142 Query 195 PWTAVLVNVATRDCWEPPMFEMDTTGLASGNCYDEATLHALYEVMERHSVAAAVAGETMF 254 P A++ T P +TTGLA+G + A HA +E +ERH+ AA+ F Sbjct 143 P-LALVDTAYTIPSPHPGWLPRNTTGLAAGTSWRGAIEHACFEALERHARCAAMKIPHFF 201 Query 255 ---EVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWDGYYCFAAELTSATLEVTFG--- 308 +V + V + +V +R AG V + I G + + + L+ F Sbjct 202 DRYQVDSRSVLAGAAGEIVGRLRSAGCSVGMWSIPTEHGLPVYWCHVMESDLQAPFAPWP 261 Query 309 --GFGLHHDPNVALSRAITEAAQSRITAISGAREDLPSAIYHRFGRVHTYAKARKTSL-R 365 GFG + AL++A+ EA QSR+ IS ARED+ IY Y AR+ S R Sbjct 262 AEGFGCDRTHDRALAKALLEACQSRLGIISAAREDMAGHIYR-------YQDARELSAWR 314 Query 366 LNRARP-TPWRVPDVDSLPELVASAATAVANRSGTEPLAVVCDFADACVP--VVKVLAPG 422 A P P+ PD L + R+G E + VV F+D +P VV+V+ P Sbjct 315 RRLAIPGLPYPSPDGADLNTDPSPLPVEALRRAGAEAVIVVALFSDETIPLHVVRVVTPP 374 Query 423 L 423 L Sbjct 375 L 375 >gi|282163224|ref|YP_003355609.1| hypothetical protein MCP_0554 [Methanocella paludicola SANAE] gi|282155538|dbj|BAI60626.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length=402 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 110/326 (34%), Positives = 160/326 (50%), Gaps = 39/326 (11%) Query 62 THRITSPDETWLALQPFLAPAGITGVADVTWLDCLGIPTVQAVRPASLT--LSVSQGKAA 119 THR+ P+ET ++ L G+T VA+++ LD +GIP A+RPAS +SV GK A Sbjct 16 THRVVPPEETLARVEKLLPGIGVTRVAEISGLDRIGIPVYSAIRPASAKGAISVYAGKGA 75 Query 120 SYRAAQVSAVMESLEGWHAENVTAD---LWSATARDL-EADLTYDPAQLRHRPGSLYHAG 175 + A+VS +ME++E + +E AD + T D+ + DP +L PG L Sbjct 76 TPVEAKVSVMMEAIERYSSEFQKADKKRVVMGTFTDVSNGKVAVDPQKL-ILPGQLL-PN 133 Query 176 VKLDWMVATTLLTGRRTWVPWTAVLVNVATRDCWEPP--MFEMDTTGLASGNCYDEATLH 233 V+LDW+ L+ + +P AV + P +F +T GLASGN +EA H Sbjct 134 VRLDWIDGYDLMNKKEVLLPCNAVF------HPYLAPFKLFRSNTNGLASGNTMEEAIFH 187 Query 234 ALYEVMERHSVAAAVA----GETMFEVPTDDVAGSDSAHLVEMIRDAGDDVDLARIDVWD 289 L EV+ER +++ A A G+ + D +A L AG DV L + Sbjct 188 GLMEVVERDALSIAEATRDPGKEITITKKDGLA----YELYAKFGKAGIDVKLWYLPTDS 243 Query 290 GYYCFAA-----ELTSATLEVTFGGFGLHHDPNVALSRAITEAAQSRITAISGARED--- 341 G A EL +L V G G H D +++ RA+TE AQSR T I GARED Sbjct 244 GIPTVLASTDDKELMDPSLLVM--GVGTHMDARISVLRALTEVAQSRATQIQGAREDTDR 301 Query 342 ---LPSAIYHRFGRV--HTYAKARKT 362 + + Y R R+ H Y + ++T Sbjct 302 EKVVRTIGYERMKRMNRHWYGEGKET 327 Lambda K H 0.318 0.131 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 900442926544 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40