BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1376
Length=497
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608516|ref|NP_215892.1| hypothetical protein Rv1376 [Mycoba... 996 0.0
gi|340626390|ref|YP_004744842.1| hypothetical protein MCAN_13921... 994 0.0
gi|31792570|ref|NP_855063.1| hypothetical protein Mb1411 [Mycoba... 993 0.0
gi|254231625|ref|ZP_04924952.1| conserved hypothetical protein [... 890 0.0
gi|289761535|ref|ZP_06520913.1| conserved hypothetical protein [... 772 0.0
gi|240170137|ref|ZP_04748796.1| hypothetical protein MkanA1_1254... 665 0.0
gi|118617306|ref|YP_905638.1| hypothetical protein MUL_1677 [Myc... 634 9e-180
gi|183982508|ref|YP_001850799.1| hypothetical protein MMAR_2493 ... 627 2e-177
gi|240169072|ref|ZP_04747731.1| hypothetical protein MkanA1_0714... 608 6e-172
gi|209967027|ref|YP_002299942.1| hypothetical protein RC1_3787 [... 159 9e-37
gi|297157813|gb|ADI07525.1| hypothetical protein SBI_04405 [Stre... 142 2e-31
gi|288962092|ref|YP_003452387.1| tfuA protein [Azospirillum sp. ... 139 8e-31
gi|297155644|gb|ADI05356.1| hypothetical protein SBI_02235 [Stre... 137 3e-30
gi|162457037|ref|YP_001619404.1| hypothetical protein sce8752 [S... 137 6e-30
gi|330468893|ref|YP_004406636.1| hypothetical protein VAB18032_2... 135 1e-29
gi|162455405|ref|YP_001617772.1| hypothetical protein sce7123 [S... 134 4e-29
gi|124485415|ref|YP_001030031.1| hypothetical protein Mlab_0590 ... 134 5e-29
gi|162457358|ref|YP_001619725.1| hypothetical protein sce9073 [S... 132 1e-28
gi|163746795|ref|ZP_02154152.1| putative antibiotic resistance p... 132 1e-28
gi|288959111|ref|YP_003449452.1| hypothetical protein AZL_022700... 132 2e-28
gi|162449060|ref|YP_001611427.1| hypothetical protein sce0790 [S... 131 2e-28
gi|268325907|emb|CBH39495.1| conserved hypothetical protein, Tfu... 130 6e-28
gi|262199466|ref|YP_003270675.1| TfuA domain protein core [Halia... 130 7e-28
gi|162448811|ref|YP_001611178.1| hypothetical protein sce0541 [S... 129 1e-27
gi|302531857|ref|ZP_07284199.1| hypothetical protein SSMG_08239 ... 128 2e-27
gi|310818640|ref|YP_003950998.1| hypothetical protein STAUR_1367... 128 3e-27
gi|333986642|ref|YP_004519249.1| TfuA-like core domain-containin... 127 4e-27
gi|119386183|ref|YP_917238.1| TfuA domain-containing protein [Pa... 127 5e-27
gi|88601827|ref|YP_502005.1| TfuA--like protein [Methanospirillu... 127 6e-27
gi|116754699|ref|YP_843817.1| TfuA domain-containing protein [Me... 126 8e-27
gi|312602563|ref|YP_004022408.1| NifS protein [Burkholderia rhiz... 126 1e-26
gi|300863881|ref|ZP_07108802.1| hypothetical protein OSCI_380010... 125 1e-26
gi|254512749|ref|ZP_05124815.1| TfuA domain protein, core [Rhodo... 125 2e-26
gi|340028845|ref|ZP_08664908.1| TfuA domain-containing protein [... 125 2e-26
gi|126179279|ref|YP_001047244.1| TfuA domain-containing protein ... 125 2e-26
gi|326795594|ref|YP_004313414.1| TfuA-like core domain-containin... 124 3e-26
gi|115375279|ref|ZP_01462544.1| hypothetical protein STIAU_4273 ... 124 3e-26
gi|298675954|ref|YP_003727704.1| TfuA domain-containing protein ... 124 5e-26
gi|219851839|ref|YP_002466271.1| TfuA domain protein core [Metha... 123 6e-26
gi|325959955|ref|YP_004291421.1| TfuA-like core domain-containin... 122 1e-25
gi|150378084|ref|YP_001314679.1| TfuA domain-containing protein ... 122 1e-25
gi|334318880|ref|YP_004551439.1| TfuA-like core domain-containin... 122 1e-25
gi|115377621|ref|ZP_01464817.1| conserved hypothetical protein [... 122 2e-25
gi|336035261|gb|AEH81192.1| TfuA domain protein core [Sinorhizob... 120 4e-25
gi|91774003|ref|YP_566695.1| TfuA-like protein [Methanococcoides... 120 4e-25
gi|338533582|ref|YP_004666916.1| hypothetical protein LILAB_1968... 119 9e-25
gi|20089062|ref|NP_615137.1| hypothetical protein MA0164 [Methan... 119 2e-24
gi|218682699|ref|ZP_03530300.1| hypothetical protein RetlC8_2816... 118 3e-24
gi|254465774|ref|ZP_05079185.1| TfuA domain protein, core [Rhodo... 117 5e-24
gi|21227559|ref|NP_633481.1| hypothetical protein MM_1457 [Metha... 116 9e-24
>gi|15608516|ref|NP_215892.1| hypothetical protein Rv1376 [Mycobacterium tuberculosis H37Rv]
gi|15840834|ref|NP_335871.1| hypothetical protein MT1420 [Mycobacterium tuberculosis CDC1551]
gi|148661167|ref|YP_001282690.1| hypothetical protein MRA_1385 [Mycobacterium tuberculosis H37Ra]
59 more sequence titles
Length=497
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/497 (100%), Positives = 497/497 (100%), Gaps = 0/497 (0%)
Query 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP 60
MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP
Sbjct 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP 60
Query 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV 120
SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV
Sbjct 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV 120
Query 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV
Sbjct 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
Query 181 GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPP 240
GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPP
Sbjct 181 GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPP 240
Query 241 TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE 300
TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE
Sbjct 241 TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE 300
Query 301 RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS 360
RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS
Sbjct 301 RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS 360
Query 361 ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR 420
ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR
Sbjct 361 ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR 420
Query 421 PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP 480
PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP
Sbjct 421 PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP 480
Query 481 APLSADVPERHFDFGSV 497
APLSADVPERHFDFGSV
Sbjct 481 APLSADVPERHFDFGSV 497
>gi|340626390|ref|YP_004744842.1| hypothetical protein MCAN_13921 [Mycobacterium canettii CIPT
140010059]
gi|340004580|emb|CCC43724.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=497
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/497 (99%), Positives = 496/497 (99%), Gaps = 0/497 (0%)
Query 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP 60
MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQA SYDLRSGDTLLIVDGLFFQQP
Sbjct 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQAFSYDLRSGDTLLIVDGLFFQQP 60
Query 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV 120
SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVG+V
Sbjct 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGMV 120
Query 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV
Sbjct 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
Query 181 GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPP 240
GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPP
Sbjct 181 GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPP 240
Query 241 TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE 300
TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE
Sbjct 241 TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE 300
Query 301 RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS 360
RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS
Sbjct 301 RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS 360
Query 361 ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR 420
ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR
Sbjct 361 ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR 420
Query 421 PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP 480
PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP
Sbjct 421 PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP 480
Query 481 APLSADVPERHFDFGSV 497
APLSADVPERHFDFGSV
Sbjct 481 APLSADVPERHFDFGSV 497
>gi|31792570|ref|NP_855063.1| hypothetical protein Mb1411 [Mycobacterium bovis AF2122/97]
gi|121637306|ref|YP_977529.1| hypothetical protein BCG_1437 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989781|ref|YP_002644468.1| hypothetical protein JTY_1412 [Mycobacterium bovis BCG str. Tokyo
172]
8 more sequence titles
Length=497
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/497 (99%), Positives = 496/497 (99%), Gaps = 0/497 (0%)
Query 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP 60
MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP
Sbjct 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP 60
Query 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV 120
SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV
Sbjct 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV 120
Query 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV
Sbjct 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
Query 181 GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPP 240
GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQ WAPP
Sbjct 181 GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQPWAPP 240
Query 241 TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE 300
TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE
Sbjct 241 TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE 300
Query 301 RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS 360
RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS
Sbjct 301 RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS 360
Query 361 ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR 420
ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR
Sbjct 361 ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR 420
Query 421 PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP 480
PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP
Sbjct 421 PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP 480
Query 481 APLSADVPERHFDFGSV 497
APLSADVPERHFDFGSV
Sbjct 481 APLSADVPERHFDFGSV 497
>gi|254231625|ref|ZP_04924952.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|124600684|gb|EAY59694.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=443
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/443 (99%), Positives = 443/443 (100%), Gaps = 0/443 (0%)
Query 55 LFFQQPSVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEAD 114
+FFQQPSVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEAD
Sbjct 1 MFFQQPSVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEAD 60
Query 115 DEVGVVHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWA 174
DEVGVVHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWA
Sbjct 61 DEVGVVHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWA 120
Query 175 RLLSEVGAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWR 234
RLLSEVGAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWR
Sbjct 121 RLLSEVGAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWR 180
Query 235 QRWAPPTSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQ 294
QRWAPPTSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQ
Sbjct 181 QRWAPPTSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQ 240
Query 295 SGSVGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGL 354
SGSVGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGL
Sbjct 241 SGSVGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGL 300
Query 355 GNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKP 414
GNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKP
Sbjct 301 GNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKP 360
Query 415 HLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIE 474
HLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIE
Sbjct 361 HLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIE 420
Query 475 VGTLGPAPLSADVPERHFDFGSV 497
VGTLGPAPLSADVPERHFDFGSV
Sbjct 421 VGTLGPAPLSADVPERHFDFGSV 443
>gi|289761535|ref|ZP_06520913.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709041|gb|EFD73057.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=398
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/389 (99%), Positives = 385/389 (99%), Gaps = 0/389 (0%)
Query 109 GVLEADDEVGVVHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPF 168
G DDEVGVVHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPF
Sbjct 10 GYSRPDDEVGVVHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPF 69
Query 169 TMRTWARLLSEVGAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTV 228
TMRTWARLLSEVGAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTV
Sbjct 70 TMRTWARLLSEVGAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTV 129
Query 229 WSRRWRQRWAPPTSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWT 288
WSRRWRQRWAPPTSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWT
Sbjct 130 WSRRWRQRWAPPTSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWT 189
Query 289 LKHPEQSGSVGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTT 348
LKHPEQSGSVGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTT
Sbjct 190 LKHPEQSGSVGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTT 249
Query 349 EERHGLGNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDD 408
EERHGLGNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDD
Sbjct 250 EERHGLGNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDD 309
Query 409 LARQKPHLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDD 468
LARQKPHLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDD
Sbjct 310 LARQKPHLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDD 369
Query 469 QLPRIEVGTLGPAPLSADVPERHFDFGSV 497
QLPRIEVGTLGPAPLSADVPERHFDFGSV
Sbjct 370 QLPRIEVGTLGPAPLSADVPERHFDFGSV 398
>gi|240170137|ref|ZP_04748796.1| hypothetical protein MkanA1_12543 [Mycobacterium kansasii ATCC
12478]
Length=488
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/483 (73%), Positives = 398/483 (83%), Gaps = 1/483 (0%)
Query 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP 60
MT GR+VVTAGPTI A DI +VVP+AEV PIAFGQAL Y LR GDTLLIVDGLFFQQ
Sbjct 1 MTTNGRVVVTAGPTIGADDIHAVVPNAEVVTPIAFGQALGYGLRPGDTLLIVDGLFFQQA 60
Query 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV 120
SVRHKELLTL+ DGVRVVGSSSMGALRAAELHPFGMEGYGWVFE YRDG+LEADDEVG+V
Sbjct 61 SVRHKELLTLIDDGVRVVGSSSMGALRAAELHPFGMEGYGWVFEGYRDGLLEADDEVGMV 120
Query 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
HGD +DGYPVFVDALVN+RHT+ARAV +G++ + LAE++IETAR+TPFT RTW RLL V
Sbjct 121 HGDPEDGYPVFVDALVNIRHTVARAVESGLISATLAEKLIETARSTPFTQRTWNRLLESV 180
Query 181 GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPP 240
GAP+ R LA QLRSLRVD+KHADA+LALR++ + +RPGPPPTVWS RWRQRWAP
Sbjct 181 GAPESRSLATQLRSLRVDIKHADAVLALREVVRGKGGRAVRPGPPPTVWSERWRQRWAPA 240
Query 241 TSVAASADHGE-SFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVG 299
T V + G S VDV DL+VLS LSV + D WAY PAL+QVAAWYW++ HPE+ G+V
Sbjct 241 TPVPVTTGSGSRSAVDVGDLDVLSLLSVCASDRWAYVPALEQVAAWYWSMTHPEEGGTVC 300
Query 300 ERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPI 359
ERAARA AEVA++ Y R+LE +A+RYA ATGIIDE+GFPE V AHWLT EE L +DPI
Sbjct 301 ERAARAAAEVAADSYERSLETVAHRYAQATGIIDESGFPEHVRAHWLTAEENESLRDDPI 360
Query 360 SISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLG 419
++SAR+ TRTLF R LPAI HFL+LLR D RLP WRAMAA AL +RD+LARQKPHLN+
Sbjct 361 AVSARLTTRTLFFARSLPAIQHFLELLRADPRLPEWRAMAARALAQRDELARQKPHLNVH 420
Query 420 RPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLG 479
RPD QLKRLF WGTQVNRIELA+RGLMTEDAFY AATPFAVAA DDQLP I+VG LG
Sbjct 421 RPDRGQLKRLFANSWGTQVNRIELAQRGLMTEDAFYTAATPFAVAAADDQLPSIQVGRLG 480
Query 480 PAP 482
P
Sbjct 481 SGP 483
>gi|118617306|ref|YP_905638.1| hypothetical protein MUL_1677 [Mycobacterium ulcerans Agy99]
gi|118569416|gb|ABL04167.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=497
Score = 634 bits (1636), Expect = 9e-180, Method: Compositional matrix adjust.
Identities = 325/483 (68%), Positives = 385/483 (80%), Gaps = 4/483 (0%)
Query 2 TACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPS 61
T GRIVVTAGPTISA D+ +VVP AEV PPIAFG AL Y LR GD LLIVDGLFFQQ S
Sbjct 5 TTGGRIVVTAGPTISADDVHAVVPHAEVVPPIAFGHALGYGLRPGDALLIVDGLFFQQAS 64
Query 62 VRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVH 121
VRHKELL+L++DG+RVVGSSSMGALRAAELHPFGMEGYGWVFE YRDG+LEADDEVG+VH
Sbjct 65 VRHKELLSLISDGIRVVGSSSMGALRAAELHPFGMEGYGWVFEGYRDGLLEADDEVGMVH 124
Query 122 GDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVG 181
GD +DGYP+FVDALVN+R TL AV +G++ + LA+++I+TAR+ PFT RT RLL VG
Sbjct 125 GDPEDGYPIFVDALVNIRQTLTHAVESGLLPAALADQLIDTARSKPFTQRTRNRLLDTVG 184
Query 182 APDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPPT 241
A + + LA QLRSLRVD+KHADA+LAL+++ +R +RPGPPPTVWS RWRQRW+PPT
Sbjct 185 AGESQNLAKQLRSLRVDIKHADAVLALQEVLRRQASTAVRPGPPPTVWSERWRQRWSPPT 244
Query 242 SVA----ASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGS 297
VA SA+ +DV D++VLS LS+ + D WAY PAL+QVAAW+W+L HP+ SG+
Sbjct 245 PVALDATESAEPAIDAIDVADIDVLSLLSLCASDRWAYLPALEQVAAWHWSLNHPDASGN 304
Query 298 VGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGND 357
VG RAA A AEV + Y +LE +A+ YALATGIID+ GFPE V AHWLT EE LG+D
Sbjct 305 VGNRAALAAAEVPCDSYQLSLETVAHHYALATGIIDDAGFPEHVRAHWLTAEENSALGDD 364
Query 358 PISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLN 417
+++SAR+ TRTLF R LPA+ HFLDLLR D RLP WR MAA A+ +RD+LARQKPHLN
Sbjct 365 AVAVSARLTTRTLFFARSLPAVAHFLDLLRGDPRLPEWRLMAARAVARRDELARQKPHLN 424
Query 418 LGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGT 477
L RPDP LK+LFG WGT V+R+ELA+RGLMTEDA Y AAT +AVAA D QLP IEVG
Sbjct 425 LRRPDPALLKQLFGTIWGTPVDRVELAQRGLMTEDASYTAATVYAVAAADGQLPAIEVGC 484
Query 478 LGP 480
LGP
Sbjct 485 LGP 487
>gi|183982508|ref|YP_001850799.1| hypothetical protein MMAR_2493 [Mycobacterium marinum M]
gi|183175834|gb|ACC40944.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=503
Score = 627 bits (1616), Expect = 2e-177, Method: Compositional matrix adjust.
Identities = 329/489 (68%), Positives = 390/489 (80%), Gaps = 10/489 (2%)
Query 2 TACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPS 61
T GRIVVTAGPTISA D+ +VVP AEV PPIAFG AL Y LR GD LLI+DGLFFQQ S
Sbjct 5 TTGGRIVVTAGPTISADDVHAVVPHAEVVPPIAFGHALGYGLRPGDALLIIDGLFFQQAS 64
Query 62 VRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVH 121
VRHKELLTL++DG+RVVGSSSMGALRAAELHPFGMEGYGWVFE YRDG+LEADDEVG+VH
Sbjct 65 VRHKELLTLISDGIRVVGSSSMGALRAAELHPFGMEGYGWVFEGYRDGLLEADDEVGMVH 124
Query 122 GDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVG 181
GD +DGYPVFVDALVN+R TLA AV +G++ + LA+++I+TAR+TPFT RTW RLL VG
Sbjct 125 GDPEDGYPVFVDALVNIRQTLAHAVESGLLPAALADQLIDTARSTPFTQRTWNRLLDTVG 184
Query 182 APDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPPT 241
A + + LA QLRSLRVD+KHADA+LAL+++ + +RPGPPPTVWS RWRQRW+PPT
Sbjct 185 AGESQNLAKQLRSLRVDIKHADAVLALQEVLRGQASTAVRPGPPPTVWSERWRQRWSPPT 244
Query 242 SVAA-SADHGE---------SFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKH 291
VA +A+ E +DV D++VLS LS+ + D WAY PAL+QVAAW+W+L H
Sbjct 245 PVALDTAESAEPAIDAIDAIDAIDVADIDVLSLLSLCASDRWAYLPALEQVAAWHWSLNH 304
Query 292 PEQSGSVGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEER 351
P+ SG+VG+RAA A AEV + Y +LE +A+ YALATGIID+ GFPE V AHWLT EE
Sbjct 305 PDASGNVGDRAALAAAEVPCDSYQLSLETVAHHYALATGIIDDAGFPEHVRAHWLTAEEN 364
Query 352 HGLGNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLAR 411
LG+D +++SAR+ TRTLF R LPA+ HFLDLLR D RLP WR MAA A+ +RD+LAR
Sbjct 365 SALGDDAVAVSARLTTRTLFFARSLPAVAHFLDLLRGDPRLPEWRLMAARAVARRDELAR 424
Query 412 QKPHLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLP 471
QKPHLNL RPDP LK+LFG WGT V+R+ELA+RGLMTEDAFY AAT +AVAA D QLP
Sbjct 425 QKPHLNLRRPDPALLKQLFGTIWGTPVDRVELAQRGLMTEDAFYTAATVYAVAAADGQLP 484
Query 472 RIEVGTLGP 480
IEVG LGP
Sbjct 485 AIEVGCLGP 493
>gi|240169072|ref|ZP_04747731.1| hypothetical protein MkanA1_07149 [Mycobacterium kansasii ATCC
12478]
Length=484
Score = 608 bits (1568), Expect = 6e-172, Method: Compositional matrix adjust.
Identities = 312/484 (65%), Positives = 376/484 (78%), Gaps = 3/484 (0%)
Query 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP 60
M A RIVVTAGPTI AD+ +VVP+AEV PPI+FG AL Y L+ GDTLLIVDGLFFQ P
Sbjct 1 MRAARRIVVTAGPTIGVADVHTVVPNAEVVPPISFGDALRYGLKPGDTLLIVDGLFFQHP 60
Query 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV 120
VRHKELLTL+ DGVRVVGSSSMGALRAAELHPFGMEGYGWVF++YR+G LEADDEV +V
Sbjct 61 PVRHKELLTLIQDGVRVVGSSSMGALRAAELHPFGMEGYGWVFDNYRNGYLEADDEVAMV 120
Query 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
HG+ +DGYPVFVDALVN+R TLARAV TG++ ++LA ++ETA TPFTMRTW RLL+ +
Sbjct 121 HGEPEDGYPVFVDALVNIRQTLARAVETGLLSAQLAADLVETAGRTPFTMRTWDRLLAAL 180
Query 181 GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPP 240
P++ LA QL + RVD+KHADA++ALR + RPGPPPTVWS RW+QRW PP
Sbjct 181 EVPERSCLAKQLTASRVDIKHADAVVALRNIVDGQDGVATRPGPPPTVWSVRWKQRWEPP 240
Query 241 TSVA---ASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGS 297
VA + + + V D +VLS LS+ + D WAY PAL+QVA+WYW + HP G
Sbjct 241 VPVAITSGTDTDTGTTLGVRDTDVLSLLSICAADRWAYLPALEQVASWYWIVTHPGDHGD 300
Query 298 VGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGND 357
V + A+RAVA+VA+ RALE +A+RYA+A G+ DE+GFP +V + WLT EE LG D
Sbjct 301 VRQHASRAVAQVAAGTRRRALETVAHRYAVAIGLADESGFPASVRSQWLTDEENATLGTD 360
Query 358 PISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLN 417
PI++SA ++TRTLFV R LPAI+HFLDLLR D RLP WR++ A AL +RD+LAR+KPHLN
Sbjct 361 PIAVSALLVTRTLFVTRSLPAIEHFLDLLRADPRLPHWRSVTAQALARRDELARRKPHLN 420
Query 418 LGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGT 477
L RPDP QLK LF RWG +V+RIELARRGLM+E+AFY AAT FAVAA DD+LP IEVG
Sbjct 421 LHRPDPRQLKNLFAKRWGAEVDRIELARRGLMSEEAFYTAATLFAVAAADDRLPSIEVGA 480
Query 478 LGPA 481
LGPA
Sbjct 481 LGPA 484
>gi|209967027|ref|YP_002299942.1| hypothetical protein RC1_3787 [Rhodospirillum centenum SW]
gi|209960493|gb|ACJ01130.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length=247
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/226 (43%), Positives = 130/226 (58%), Gaps = 10/226 (4%)
Query 8 VVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKEL 67
+V GPT++ AD R ++ A+ PP+A G L + + IVDG F PSV HKE+
Sbjct 5 IVFLGPTLALADAREILA-ADYRPPVAQGDVLRAVMDGARAIGIVDGFFENVPSVWHKEI 63
Query 68 LTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDG 127
L + GV+V GS+SMGALRAAELHPFGM G G VFE++ D LE DDEV V HG A+ G
Sbjct 64 LFALTKGVQVYGSASMGALRAAELHPFGMHGVGAVFEAFADSRLEDDDEVAVTHGPAEIG 123
Query 128 YPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSE-----VGA 182
YP+ +A+VN+R TL+ A G++ + + A+A P+ RT+ARL + V
Sbjct 124 YPILSEAMVNIRRTLSDAFGRGIIGTGTRRHLEAMAKALPYKERTYARLFRDAATAGVNR 183
Query 183 PDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTV 228
+ L A L + R D K DA+ LR + R RP P TV
Sbjct 184 AEVEALRAWLPTGRADQKREDAVAMLRTM----RAALERPWTPATV 225
>gi|297157813|gb|ADI07525.1| hypothetical protein SBI_04405 [Streptomyces bingchenggensis
BCW-1]
Length=469
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 141/487 (29%), Positives = 208/487 (43%), Gaps = 77/487 (15%)
Query 12 GPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKELLTLM 71
GP++ A D V PP+A G L + GD + I+DG F Q +VRHKE+L L+
Sbjct 8 GPSLPDAADLLAADDITVPPPVAAGDLLKLAPQQGDLVGIIDGYFRQTRAVRHKEILALL 67
Query 72 ADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDGYPVF 131
GV V+G++ MGALRAAEL FGM G G ++ Y++G L ADDEV +HG ADDGY
Sbjct 68 QTGVTVLGAAGMGALRAAELDTFGMHGVGRIYRDYQEGRLTADDEVAFLHGPADDGYRPV 127
Query 132 VDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLS---EVGAPDQRGL 188
+ALVN+R TL + G++ A ++ P+ MR++ L+ E P
Sbjct 128 SEALVNIRATLRLCIQEGILDEPTAGHLVAALARRPYHMRSYPELIQLARETATP----- 182
Query 189 AAQLRSLR-------VDVKHADALLALRQLG--QRPRVEPLRPGPP-----PTVWSRRWR 234
AA + +LR VDV DAL + +L + R P P PT++ RW+
Sbjct 183 AANVEALRHLCATRAVDVTRDDALQLVHKLRTLEESRANGTTPHSPNFTIAPTIYLHRWQ 242
Query 235 QRWAPPTSVAASADHGESFVDVTD-----LEVLSFLSVSSVDYWAYRPALQQVAAWYWTL 289
G V+ D + VL + + DY + L
Sbjct 243 L--------------GARSVETADGRTAEMSVLRMCQLFARDYPDFYRDL--------VF 280
Query 290 KHPEQSGSVGERAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVA--AHWLT 347
H Q + R A + RALE +R + + PE ++ WLT
Sbjct 281 NHLVQECASNCRTQHTEATL-----DRALEHARHRNVIPD---PRSNKPEDLSFLDLWLT 332
Query 348 TEER------HGLGNDPISISARVITRTLFVVRLLPAIDHF-LDLLRKDSRLPRWRAMAA 400
ER H LG + R+ + PA DH LD LR+ +P +
Sbjct 333 PAERTTRPLKHQLGT--------FLVRSFQLTPGAPA-DHLALDALRRRPIVPTAAKLVN 383
Query 401 HALCKRDDLARQKPHLNLGRPDPTQLKRLFGARWGTQVNRIELA--RRGLMTEDAFYAAA 458
A + + + ++ ++ RWG + +EL RG+ + D AAA
Sbjct 384 AAKTVNEQAQQTQSTFDIHTLSADRILTHISERWGVEPGTLELHALDRGMGSRDVLVAAA 443
Query 459 TPFAVAA 465
P+ + A
Sbjct 444 RPYYLLA 450
>gi|288962092|ref|YP_003452387.1| tfuA protein [Azospirillum sp. B510]
gi|288914358|dbj|BAI75843.1| tfuA protein [Azospirillum sp. B510]
Length=250
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/213 (42%), Positives = 119/213 (56%), Gaps = 6/213 (2%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
+ V GPT+ D + DA PP+A G L + I+DG F PSV HKE
Sbjct 4 VYVFLGPTLPREDA-VLELDATYLPPVAQGDVLRLCAERPAAIGIIDGFFESVPSVWHKE 62
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L + G+ V G+SSMGALRAAEL+PFGM G G +FE++RDG LE DDEV V+HG A+
Sbjct 63 ILYAIHAGIPVFGASSMGALRAAELYPFGMIGVGAIFEAFRDGRLEDDDEVAVIHGPAEL 122
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLS-----EVG 181
GY +A+VN+R TL+ AVA V+ + A R+ A+ P+ R + R+L E+
Sbjct 123 GYTSLSEAMVNIRRTLSDAVAERVLTAGTALRLESIAKELPYRERGYGRMLRLGGDIELP 182
Query 182 APDQRGLAAQLRSLRVDVKHADALLALRQLGQR 214
A + L R D K DA LR + +R
Sbjct 183 AAELSAFRGWLPQGRFDQKREDAKAMLRTMARR 215
>gi|297155644|gb|ADI05356.1| hypothetical protein SBI_02235 [Streptomyces bingchenggensis
BCW-1]
Length=466
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/377 (34%), Positives = 182/377 (49%), Gaps = 55/377 (14%)
Query 7 IVVTAGPTISAADI-----RSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPS 61
+ V GPT+SAAD+ R+ A V P+ G L+ D + DT+LI+DG+F Q
Sbjct 3 VHVFIGPTLSAADVLAVADRAATDRAVVHRPVRHGDLLALDTGAADTVLIIDGVFHQTAP 62
Query 62 VRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVH 121
VRHKE++ ++A RV+G+SSMGALRAAEL P+GMEG G VF Y G L++D+EV V H
Sbjct 63 VRHKEIIDVLARRTRVIGASSMGALRAAELWPYGMEGVGLVFGMYAQGELDSDEEVAVGH 122
Query 122 GDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVG 181
+ + + V LVN+R T++ AVA + + ++ AR +T R+WA ++
Sbjct 123 LPSGEHRQLTV-PLVNVRWTISNAVAGKALAPDDGATLLNAARTLHYTERSWAAIVHTTR 181
Query 182 --APDQRGLAAQLRSLR------VDVKHADALLALRQLGQRPRVEPLRPGPPP------T 227
P A +LR D+K DALLAL PR PG P T
Sbjct 182 RLHPAAAEAAIRLREFAERHPDLSDLKRRDALLALSHCST-PRAAASFPGFTPAWMVPRT 240
Query 228 VWSRRWRQRWAPPTSVAASADHGESFVDVTDLEVLSFLSVSSVDY-WAYRP-ALQQVAAW 285
++ RWR + P A V++L+VL F + + D+ YR AL ++A
Sbjct 241 MYLDRWRGTYRP-------AVRDRRTAAVSELDVLRFQQLYAPDFPQRYRRFALTRIAGI 293
Query 286 YWTLKHPEQSGSVGE-RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAH 344
P S G+ R RA E A + GI T P + ++
Sbjct 294 ------PSASTDDGDGRLVRAALEAADQ----------------RGISART-LPRSAWSY 330
Query 345 WLTT-EERHGLGNDPIS 360
WLT E+R G D +S
Sbjct 331 WLTPWEQREGGPEDRLS 347
>gi|162457037|ref|YP_001619404.1| hypothetical protein sce8752 [Sorangium cellulosum 'So ce 56']
gi|161167619|emb|CAN98924.1| uncharaterized conserved protein [Sorangium cellulosum 'So ce
56']
Length=368
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/201 (46%), Positives = 114/201 (57%), Gaps = 3/201 (1%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
IV+ GP++ AD+ VPD V PP A G + +VDG F P+V HKE
Sbjct 2 IVLFTGPSLPPADV-PAVPDLRVLPPAAQGDVYRAARERPWGIGLVDGFFEHVPAVWHKE 60
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L MA+GV V G+SSMGALRAAEL FGM G GWVFE +R G L+ADDEV + H AD
Sbjct 61 ILWAMAEGVHVFGASSMGALRAAELADFGMVGVGWVFEQFRSGALDADDEVALTHLAADR 120
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAP--D 184
GY +ALV++R TL AVA G A+R++ A+ + R W LL+E A D
Sbjct 121 GYRRVSEALVDIRATLDAAVAAGACTRAAADRLVALAKQRFYPDRRWPELLAEARAAGCD 180
Query 185 QRGLAAQLRSLRVDVKHADAL 205
L L RVD K DAL
Sbjct 181 VAALERWLPGGRVDQKRRDAL 201
>gi|330468893|ref|YP_004406636.1| hypothetical protein VAB18032_24690 [Verrucosispora maris AB-18-032]
gi|328811864|gb|AEB46036.1| hypothetical protein VAB18032_24690 [Verrucosispora maris AB-18-032]
Length=456
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/276 (38%), Positives = 144/276 (53%), Gaps = 11/276 (3%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
I V GPT+ + ++P+A PP++ G L R + I+DG F P+V HKE
Sbjct 3 IHVFLGPTLPRERAQELLPEATFLPPVSQGDVLRSVARRPSAIGIIDGRFHDVPAVWHKE 62
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L ++ G+ V GS+SMGALRAAEL FGM G G +F +Y +G L DDEV V H DADD
Sbjct 63 ILWAISRGIPVYGSASMGALRAAELAAFGMRGVGEIFTAYHEGSLNDDDEVAVAHADADD 122
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSE-----VG 181
GY +A+VN+R TLA A G+V A +++ A+ T + R++ +LL+ +
Sbjct 123 GYRPVNEAMVNVRATLAAAANAGIVAERTATDLVQLAKQTYYLGRSYPQLLAAGEAAGLP 182
Query 182 APDQRGLAAQLRSLRVDVKHADALLALRQLGQR--PRVEPLRPGPPPTVWSRRWRQRWAP 239
A + L A L RVD K DA LR + Q V P T + + RQ
Sbjct 183 ADELAALRAWLPGNRVDRKARDAEAMLRLMAQERGADVPPANFTFEHTAFFEQARQTAGE 242
Query 240 PTSV---AASADHGESFVDVTDLEVLSFLSVSSVDY 272
V AA+ D G+ VT LE+L L + V Y
Sbjct 243 LGGVAGAAANTDDGDP-ASVTALEILDELRLDPVRY 277
>gi|162455405|ref|YP_001617772.1| hypothetical protein sce7123 [Sorangium cellulosum 'So ce 56']
gi|161165987|emb|CAN97292.1| hypothetical protein sce7123 [Sorangium cellulosum 'So ce 56']
Length=402
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/220 (44%), Positives = 125/220 (57%), Gaps = 8/220 (3%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
I + GPTI+A + + + DA PP A G L + I+DG F + PSV HKE
Sbjct 3 IYIFTGPTIAATEAKEQL-DAVFLPPAAQGDVYRAALDRPVAIGIIDGYFERTPSVSHKE 61
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L M GV V G++SMGALRAAEL FGMEG G ++++Y G L+ADDEV V HG A+D
Sbjct 62 ILWAMGQGVHVFGAASMGALRAAELSAFGMEGVGAIYDAYARGELDADDEVAVAHGAAED 121
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLL-----SEVG 181
GY +A+VN+R TL A A G + + ER+ + A+ +T R + LL V
Sbjct 122 GYRPMSEAMVNVRATLRAAEAAGALPAAAGERLEQIAKRLFYTDRCYPILLRLAAGQGVP 181
Query 182 APDQRGLAAQLRSLRVDVKHADALLALRQLGQR--PRVEP 219
A D L A L RVD K DAL LR + +R RVEP
Sbjct 182 AADIGALRAFLPEGRVDQKRTDALELLRLMRERFTGRVEP 221
>gi|124485415|ref|YP_001030031.1| hypothetical protein Mlab_0590 [Methanocorpusculum labreanum
Z]
gi|124362956|gb|ABN06764.1| TfuA domain protein, core [Methanocorpusculum labreanum Z]
Length=213
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/208 (37%), Positives = 124/208 (60%), Gaps = 5/208 (2%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHK 65
+VV GP++ A +S++PDA PP+ G A + + D ++I+DG+FFQ +V H+
Sbjct 5 NVVVFIGPSLDLAAAKSILPDAVFLPPVKRGAAAAA-AENADIMVIIDGVFFQDEAVGHR 63
Query 66 ELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDAD 125
ELL +M GV+V GSSSMGALRA+EL GM G G ++ Y+ G + ADDEVG+V+ D +
Sbjct 64 ELLGVMKSGVKVYGSSSMGALRASELDTLGMIGVGKIYHQYKSGEIIADDEVGLVY-DTE 122
Query 126 DGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLL--SEVGAP 183
G + +VNMR + ++A V+ E + +++ +A + RT+ R++ +++ A
Sbjct 123 TGIA-LSEPMVNMRASFSKAFEKSVITGEEEKSLLKACKAIYYPDRTYRRVIKDADISAE 181
Query 184 DQRGLAAQLRSLRVDVKHADALLALRQL 211
+ L + ++ VD K DAL L +
Sbjct 182 TKETLLSWIKDNAVDQKRLDALECLNTV 209
>gi|162457358|ref|YP_001619725.1| hypothetical protein sce9073 [Sorangium cellulosum 'So ce 56']
gi|161167940|emb|CAN99245.1| hypothetical protein sce9073 [Sorangium cellulosum 'So ce 56']
Length=468
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/215 (42%), Positives = 122/215 (57%), Gaps = 10/215 (4%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
I+V GPT+S R+ + DA PP++ G + + I+DG F + P+V HKE
Sbjct 3 IIVFVGPTLSLEAARAEL-DALYLPPVSQGDVYRACAKRPSAIAIIDGYFERVPAVWHKE 61
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L MA G+ V GSSSMGALRAAEL FGMEG G +FE+YRDG++E DDEV VVHG AD
Sbjct 62 ILFAMAQGIHVFGSSSMGALRAAELSAFGMEGVGAIFEAYRDGLIEDDDEVAVVHGPADS 121
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLL---SEVGAP 183
G+ +A+VN+R T A A GV+ + + + A++ + R + +L S G P
Sbjct 122 GFRAGSEAMVNIRRTFDAAAAAGVITAATRDALTAVAKSLYYPDRVYPVILDAASRHGVP 181
Query 184 DQRGLAAQLRSL----RVDVKHADALLALRQLGQR 214
A LR RV+ K DA+ LR L R
Sbjct 182 QSE--LASLRDFLPKGRVNQKRDDAIALLRHLRAR 214
>gi|163746795|ref|ZP_02154152.1| putative antibiotic resistance protein [Oceanibulbus indolifex
HEL-45]
gi|161379909|gb|EDQ04321.1| putative antibiotic resistance protein [Oceanibulbus indolifex
HEL-45]
Length=258
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/207 (40%), Positives = 113/207 (55%), Gaps = 3/207 (1%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
++V AGP++ D E+ PP+ G L + I+DG F PSV HKE
Sbjct 1 MIVFAGPSLCDTDFLQGSA-LEIRPPVRQGDVYLATLEKPKAIGIIDGYFDGTPSVWHKE 59
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L ++ G+ V+G+SSMGALRAAEL FGM G G ++ YRDG+LE DDEV + HG A+
Sbjct 60 ILWAISQGITVLGASSMGALRAAELDTFGMIGVGAIYVDYRDGILEGDDEVALAHGPAEL 119
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSE--VGAPD 184
G+ A+VN+R TL AV V+ A + A+ F RTW +LSE G D
Sbjct 120 GFTRLSVAMVNVRATLKAAVLANVLSRTEAGELAVRAKNIFFKDRTWESVLSETDTGLND 179
Query 185 QRGLAAQLRSLRVDVKHADALLALRQL 211
+ L A + + VD K DA L ++
Sbjct 180 RENLKAWIAANEVDQKRIDAGFLLERM 206
>gi|288959111|ref|YP_003449452.1| hypothetical protein AZL_022700 [Azospirillum sp. B510]
gi|288911419|dbj|BAI72908.1| hypothetical protein AZL_022700 [Azospirillum sp. B510]
Length=469
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/222 (40%), Positives = 118/222 (54%), Gaps = 5/222 (2%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALS-YDLRSGDTLLIVDGLFFQQPSVRH 64
+I V GPT++ D R+++ DA PP A LS + D + ++DG+F Q SV H
Sbjct 2 KICVFLGPTMAVEDARTILSDAVYLPPAAQADILSAMTIHQPDVIALIDGVFGQSLSVWH 61
Query 65 KELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDA 124
KE+L ++ G+ V G+SSMGALRAAE H FGM G V Y DG L DDEV + H
Sbjct 62 KEILFALSRGIAVYGASSMGALRAAECHGFGMIPIGEVARQYIDGRLTGDDEVALAHAGP 121
Query 125 DDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAPD 184
+DGY + LVN+R +L AVA G + +L +R++ A+ F RT R+ +E D
Sbjct 122 EDGYLPLSEPLVNLRASLEAAVAAGAIDGDLRDRVVTAAKRCYFPERTRDRIWAEAALTD 181
Query 185 Q--RGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGP 224
L L + VD K DA L L + P RP P
Sbjct 182 AEIERLERFLDAGAVDQKRRDAEALLNHLAS--LITPPRPAP 221
>gi|162449060|ref|YP_001611427.1| hypothetical protein sce0790 [Sorangium cellulosum 'So ce 56']
gi|161159642|emb|CAN90947.1| hypothetical protein sce0790 [Sorangium cellulosum 'So ce 56']
Length=445
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/227 (38%), Positives = 121/227 (54%), Gaps = 5/227 (2%)
Query 8 VVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKEL 67
VV GPTIS D S +P + PPIA G + +I+DG+F QQ +V +E+
Sbjct 9 VVYIGPTISRRDAESALPGGDFRPPIARGDLYAARQHGSAVFVIIDGVFSQQEAVPPREI 68
Query 68 LTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDG 127
+ ++ DG V+G+SSMGALRAAE P GM G G ++ +R GVL +DDEV V+ D DD
Sbjct 69 VDVLRDGATVIGASSMGALRAAECWPLGMRGVGAIYRLFRRGVLGSDDEVAVLM-DPDDS 127
Query 128 YPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAPDQRG 187
+ AL+N+RH ++ AV G + A+R+ A + RTW+ +L D G
Sbjct 128 HRALTVALINVRHAVSMAVRAGRLDRATADRLTRAAIDLYYADRTWSAVLGRALMSDPDG 187
Query 188 LAAQLRSLRVDVKHADALLALRQLGQRPRVEP---LRPGPPPTVWSR 231
+ D+K DAL ALR +R +P RP P ++R
Sbjct 188 HIEAFLATH-DLKRDDALRALRDTARRIAADPGLLARPRLGPACFAR 233
>gi|268325907|emb|CBH39495.1| conserved hypothetical protein, TfuA-like protein family [uncultured
archaeon]
Length=217
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/209 (35%), Positives = 120/209 (58%), Gaps = 7/209 (3%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
+VV GP++ A R ++ +AE PP + G + ++DG+FFQ +V H+E
Sbjct 4 VVVFIGPSLEAETARKIL-NAEYRPPASRGDIFRAVKEGTKIIGLIDGVFFQTCAVAHRE 62
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L + GV+V+G+SSMGALRA EL FGMEG G ++E Y+ G L +DDEV ++ +
Sbjct 63 ILYALERGVKVIGASSMGALRAYELDCFGMEGVGKIYELYKQGELVSDDEVALIF--EPE 120
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAPDQR 186
Y + LVN+R+ + A G++ E E+++ AR+ + R + R+LS ++
Sbjct 121 TYKPLSEPLVNIRYNIGLAEEKGILNEEAKEKVLNIARSLYYPERDYERVLSIAEGEVEK 180
Query 187 GLAAQLRSL----RVDVKHADALLALRQL 211
G+ QL+ R D+K DA+ AL+++
Sbjct 181 GVLVQLKKFLSEGRRDLKREDAIGALKRI 209
>gi|262199466|ref|YP_003270675.1| TfuA domain protein core [Haliangium ochraceum DSM 14365]
gi|262082813|gb|ACY18782.1| TfuA domain protein core [Haliangium ochraceum DSM 14365]
Length=464
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/221 (41%), Positives = 119/221 (54%), Gaps = 7/221 (3%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
+ V GPT+SA R+ + DA PP G LR + I+DG F + P+V HKE
Sbjct 3 VYVFTGPTLSAERGRAEL-DAVFLPPCGQGDVYRAALRQPRVIAIIDGYFERVPAVWHKE 61
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L M+ GV V G++SMGALRAAEL FGM G G ++E G + DDEV V+HGDAD
Sbjct 62 ILWAMSRGVHVFGAASMGALRAAELAAFGMRGIGTIYEDLCSGAITRDDEVAVLHGDADS 121
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTW----ARLLSEVGA 182
G+ +ALVN+R TL A GV+ +E R+ E A A + R + AR + A
Sbjct 122 GFRPLSEALVNIRATLLAAEQAGVLGAEQRARLHELAAAMFYGDRGYPALLARAAEQGAA 181
Query 183 PDQ--RGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLR 221
P+ R L + RVD K DAL L + + EP R
Sbjct 182 PESTLRALGDFVSENRVDQKQQDALALLGAVREHLAGEPGR 222
>gi|162448811|ref|YP_001611178.1| hypothetical protein sce0541 [Sorangium cellulosum 'So ce 56']
gi|161159393|emb|CAN90698.1| hypothetical protein sce0541 [Sorangium cellulosum 'So ce 56']
Length=365
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/214 (42%), Positives = 119/214 (56%), Gaps = 6/214 (2%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHK 65
+I V GPT++ ++ R+ + DA PP A G S L + I+DG F + P+V HK
Sbjct 2 KIYVFTGPTLAPSEARAYL-DATYLPPAAQGDVYSATLDRPVAIGIIDGYFERVPAVWHK 60
Query 66 ELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDAD 125
E+L M+ G+ V+GS+SMGALRAAEL FGMEG G ++E++ G LE DDEV V H D
Sbjct 61 EVLWAMSQGIHVLGSASMGALRAAELAAFGMEGVGAIYEAFARGELEDDDEVAVAHRPPD 120
Query 126 DGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLS---EVGA 182
DGY +A+VN+R TL A A G V + + A+ + RTW LL G
Sbjct 121 DGYKACSEAMVNVRSTLRAAAAAGAVDEGTRDALERIAKRLFYAERTWPLLLEAGRAEGL 180
Query 183 PDQ--RGLAAQLRSLRVDVKHADALLALRQLGQR 214
P + L A L RVD K DA+ L Q+ R
Sbjct 181 PRETLEALRAFLPRGRVDQKRLDAIAMLEQMSAR 214
>gi|302531857|ref|ZP_07284199.1| hypothetical protein SSMG_08239 [Streptomyces sp. AA4]
gi|302440752|gb|EFL12568.1| hypothetical protein SSMG_08239 [Streptomyces sp. AA4]
Length=431
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/251 (37%), Positives = 126/251 (51%), Gaps = 28/251 (11%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
I V GPTI ++R +V + V PI G + D+ SGDT+L++DGL+ Q S+RHKE
Sbjct 2 IHVFVGPTIGEKEVRGIVGEVAVHRPIKHGDLFAPDIASGDTVLVLDGLYHQSLSLRHKE 61
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+ + +GVRVVG+SS+GALRAA+L FGM G G ++ +Y G + DDEV V HG +DD
Sbjct 62 VFHALDNGVRVVGASSVGALRAADLARFGMIGIGEIYRAYASGEIVGDDEVAVAHG-SDD 120
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRT------WARLLS-- 178
LVN+R L A A V+ + ++E R + RT WAR
Sbjct 121 DLSALTVPLVNIRAVLRAAAAEHVIPAAEQAALLELFRQLYYPQRTFRTCLRWARKHGRE 180
Query 179 ------EVGAPDQRGLAAQLRSLRVDVKHADALLALRQLG-----QRPRVEPLRPGPPPT 227
E D+R Q K ADA+ AL + Q E +R G T
Sbjct 181 DFADWWEAKTRDERHFGNQ--------KRADAIAALTWIQETRDWQESSGERVRLGDWHT 232
Query 228 VWSRRWRQRWA 238
+ R WR +A
Sbjct 233 GFYRDWRNHFA 243
>gi|310818640|ref|YP_003950998.1| hypothetical protein STAUR_1367 [Stigmatella aurantiaca DW4/3-1]
gi|309391712|gb|ADO69171.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length=447
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/222 (38%), Positives = 126/222 (57%), Gaps = 7/222 (3%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHK 65
+++V GPT+S + R + +A PP+A G+ L + I+DG F + P+V HK
Sbjct 2 KLIVFTGPTLSVDEAREEL-EALYRPPVAQGEVYRAALERPWGIGIIDGYFERVPAVWHK 60
Query 66 ELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDAD 125
E+L M+ G+ V GS+SMGALRAAEL FGMEG G ++E+++ G L+ DDEV V G A+
Sbjct 61 EILWAMSQGIHVFGSASMGALRAAELAAFGMEGVGAIYEAFQRGALQDDDEVAVAQGPAE 120
Query 126 DGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV---GA 182
G+ +A+VN+R TL A V+ + + A+ F R + R+L+ G
Sbjct 121 QGHRALSEAMVNIRATLRLAEEEAVISPAVGTGLERIAKRLFFPERVYPRILAAATREGW 180
Query 183 PDQRGLAAQ--LRSLRVDVKHADALLALRQLGQRPRVEPLRP 222
P+ A + + RV++K ADAL LR + +R V P RP
Sbjct 181 PEGELTAFREWVSQGRVNLKRADALAMLRVMRERREVAP-RP 221
>gi|333986642|ref|YP_004519249.1| TfuA-like core domain-containing protein [Methanobacterium sp.
SWAN-1]
gi|333824786|gb|AEG17448.1| TfuA-like core domain-containing protein [Methanobacterium sp.
SWAN-1]
Length=216
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/215 (33%), Positives = 120/215 (56%), Gaps = 5/215 (2%)
Query 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP 60
M +I+V G +I + R ++ DA+ PP+ G + + + I+DG+F ++P
Sbjct 1 MITSKKIIVFTGTSIHPDEARGIL-DADYRPPVGRGDVIKALNDKPELIAIIDGVFHKRP 59
Query 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV 120
+V HKE+L + +GV VVG +SMGALRA+EL FGM G G V+ Y++G++EADD+V VV
Sbjct 60 AVSHKEILKALNEGVTVVGGASMGALRASELEDFGMIGIGTVYRDYKEGIIEADDDVAVV 119
Query 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
+A ++M + A+ G++ + +R+IE+A++ + RT+ R+L +
Sbjct 120 FNPK--TLEQLSEAFISMIYNFKAALKKGLIDEDDFKRLIESAKSIYYPKRTYKRVLKDT 177
Query 181 GAPDQRGLAAQ--LRSLRVDVKHADALLALRQLGQ 213
+++ Q L D+K DAL L + +
Sbjct 178 NIDEEKKAVLQKFLDEKAKDIKREDALKVLEYIKE 212
>gi|119386183|ref|YP_917238.1| TfuA domain-containing protein [Paracoccus denitrificans PD1222]
gi|119376778|gb|ABL71542.1| TfuA domain protein, core [Paracoccus denitrificans PD1222]
Length=451
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/270 (35%), Positives = 143/270 (53%), Gaps = 13/270 (4%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
++V GP++ AD R+ PP+ G + + ++DG F P+V HKE
Sbjct 3 VIVFVGPSLRQAD-RAAFAQFRFLPPVQQGDLYRAARQRPRAIGLIDGYFDGVPAVWHKE 61
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L ++ G+ V G++SMGALRAAEL PFGM G G +F + +G L DDEV ++HG A+
Sbjct 62 VLWAISQGIAVFGAASMGALRAAELAPFGMRGVGRIFRDFHEGRLTDDDEVALLHGPAET 121
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLS---EVGAP 183
G+ + +VN+R T A A+A G++ + A ++ TA+A + R W +L+ +V A
Sbjct 122 GHAALSEPMVNIRATAAAALAAGILDAPAAAHLLATAKALFYQQRDWPAILAAAEQVPAT 181
Query 184 DQRGLAAQLRSLRVDVKHADALLALRQL-GQRPRVEPLRPGPPPTVWSRRWRQRWAPPTS 242
+ LAA L R+D K ADAL L L R EP PP ++ W + WA
Sbjct 182 MRDRLAAWLPDGRIDQKRADALEMLHVLQAHVARDEP----PPRAEFTFEWTEAWASAPW 237
Query 243 VAASADHGESFVDVTDLEVLSFLSVSSVDY 272
+AA HG+ ++ D +L L + Y
Sbjct 238 LAA---HGDG-IEAGDALMLDALRLQGEPY 263
>gi|88601827|ref|YP_502005.1| TfuA--like protein [Methanospirillum hungatei JF-1]
gi|88187289|gb|ABD40286.1| TfuA-like, core [Methanospirillum hungatei JF-1]
Length=213
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/210 (38%), Positives = 119/210 (57%), Gaps = 5/210 (2%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
+++ GP++S + ++ AE PP+ L + I+DG+FF+ +V H+E
Sbjct 4 VIIFLGPSLSIPEALRILA-AEYRPPVRRVDLLEIIHIRPRVVGIIDGVFFEDAAVGHRE 62
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L +M G+ V+G+SSMGALRAAEL PFGM G G +F YRDG +E+DDEV ++ +
Sbjct 63 VLEVMKHGITVIGASSMGALRAAELEPFGMIGIGEIFRMYRDGEIESDDEVALICDPTTN 122
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVG-APDQ 185
F +ALVN+R TL V TG + AE+I+ T ++ + R+W R+L E PD+
Sbjct 123 --MAFSEALVNIRITLRHGVRTGFFTEDEAEQILRTGQSLWYPDRSWPRILKECTFDPDR 180
Query 186 RG-LAAQLRSLRVDVKHADALLALRQLGQR 214
+ +R R+D K DA L + R
Sbjct 181 TDEMMKWIREHRIDQKQEDAKETLAYIRDR 210
>gi|116754699|ref|YP_843817.1| TfuA domain-containing protein [Methanosaeta thermophila PT]
gi|116666150|gb|ABK15177.1| TfuA domain protein, core [Methanosaeta thermophila PT]
Length=208
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/204 (39%), Positives = 119/204 (59%), Gaps = 15/204 (7%)
Query 21 RSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKELLTLMADGVRVVGS 80
RS++ DA+ PP G L+ D + ++DG+FFQ SV HKE+L + GVRV+G+
Sbjct 7 RSIL-DADYRPPARRGDVLAAARDGADLICLIDGVFFQDSSVAHKEILEALRMGVRVIGA 65
Query 81 SSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDGYPV----FVDALV 136
SSMGALRAAE+ +GMEG G ++ +YR G + ADDEV +V PV + LV
Sbjct 66 SSMGALRAAEMDVYGMEGVGEIYRAYRSGEIVADDEVALVFD------PVTLAPLSEPLV 119
Query 137 NMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGA--PDQRGLAAQ--L 192
N+RH L AV+ G + + A +++ AR+ F R++ L+ + P+++ L + L
Sbjct 120 NIRHNLRLAVSEGWIDKQTAADLLDIARSRYFPSRSYENLMKDAAGRVPEEKLLQFRRFL 179
Query 193 RSLRVDVKHADALLALRQLGQRPR 216
S R D+K DA+ ALR+ + R
Sbjct 180 ESRRADLKREDAIRALRRAAEVAR 203
>gi|312602563|ref|YP_004022408.1| NifS protein [Burkholderia rhizoxinica HKI 454]
gi|312169877|emb|CBW76889.1| NIFS PROTEIN [Burkholderia rhizoxinica HKI 454]
Length=482
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/204 (38%), Positives = 111/204 (55%), Gaps = 0/204 (0%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHK 65
+I V GP+ + R+ + DA+ PP A G ++++DG F+ + SV HK
Sbjct 20 QIAVFLGPSCPLDEARTHLADADYFPPAARGSFYDIINDGYQIIVLIDGFFYGKLSVWHK 79
Query 66 ELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDAD 125
E+L + G+ V+G+SSMGALRAAEL G+ G G +F YRDG+++ DDEV ++H
Sbjct 80 EILYALDSGIVVIGASSMGALRAAELQGTGIIGAGTIFGWYRDGLIDGDDEVALLHESTQ 139
Query 126 DGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAPDQ 185
D Y LVN+R L RAV G++ S II+ A+ FT RT +L +
Sbjct 140 DNYTGLTIPLVNLRWQLMRAVEDGLIDSRSEALIIDRAKQMCFTERTLEGILEPLRDVID 199
Query 186 RGLAAQLRSLRVDVKHADALLALR 209
G S D+K +DA+LAL+
Sbjct 200 IGAVKTTLSNGTDLKKSDAILALK 223
>gi|300863881|ref|ZP_07108802.1| hypothetical protein OSCI_380010 [Oscillatoria sp. PCC 6506]
gi|300338124|emb|CBN53948.1| hypothetical protein OSCI_380010 [Oscillatoria sp. PCC 6506]
Length=478
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/222 (31%), Positives = 122/222 (55%), Gaps = 6/222 (2%)
Query 9 VTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKELL 68
V GP++ + + ++ A PP+ G +T++++DG+F Q+ V +E+L
Sbjct 9 VFLGPSLRIDEAKKIL-HANYYPPVRRGDIYRIIPSGIETIILIDGVFHQERPVWQREIL 67
Query 69 TLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDGY 128
+ G++V G+S +GALRAAELH FGM+G G +FE YRDG+++ DDE+ + +GD +
Sbjct 68 DAINAGIKVYGASGVGALRAAELHEFGMKGCGTIFEWYRDGIIDGDDEIWLTYGDDSHNF 127
Query 129 PVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLS-----EVGAP 183
+ L+N+R+TL AV G + +E + +IE A+ + R++ +LL ++
Sbjct 128 CPISEPLINIRYTLLNAVKNGCLTAEKSAELIEFAKQLYYPDRSYQQLLKSPVLQQLSPL 187
Query 184 DQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPP 225
D + L + +VD+K DA+ L + + + + P
Sbjct 188 DFAEIKTYLMTQQVDLKRLDAMQVLNWQSESSQKQEIISSQP 229
>gi|254512749|ref|ZP_05124815.1| TfuA domain protein, core [Rhodobacteraceae bacterium KLH11]
gi|221532748|gb|EEE35743.1| TfuA domain protein, core [Rhodobacteraceae bacterium KLH11]
Length=445
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/305 (32%), Positives = 144/305 (48%), Gaps = 17/305 (5%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
+V+ GPT+ A ++ +P A + PP+ G + I+DG F PSV HKE
Sbjct 3 VVIFVGPTLRAEAVQEQLP-ATILPPVQQGDVYRVARDRPRAIGIIDGYFDGVPSVWHKE 61
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L + G+ V GS+SMGALRAAEL FGM G G VFE Y G +E DDEV V+HG A+
Sbjct 62 ILWALEHGIPVYGSASMGALRAAELAEFGMIGVGRVFEDYLTGAIEDDDEVAVLHGPAEL 121
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAPDQ- 185
G+ + +V++R T+ RA GV+ + A ++ TA+ + R W R+++ P +
Sbjct 122 GFLPLSEPMVSIRATVDRAQTQGVLDPKAASALLGTAKDLHYRDRMWDRIIAAADMPSEL 181
Query 186 RGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQRWAPPTSVAA 245
G L + +VD K DA + L + Q +P + WR+ A
Sbjct 182 DGFQRWLPAGQVDAKGDDARMMLDLMAQHLAEDPAERSVQRVERTLAWRELCARVDGEVV 241
Query 246 SADHGESFVDVTDLE-----------VLSFLSVSSVDYWAYRP----ALQQVAAWYWTLK 290
+ G VD L+ LS LS + + P LQQ++A +
Sbjct 242 QQNSGAEVVDELRLDPELYARLRNRAALSLLSKDAAHRFGQEPDKDALLQQMSAHRLDAR 301
Query 291 HPEQS 295
P +
Sbjct 302 LPRHA 306
>gi|340028845|ref|ZP_08664908.1| TfuA domain-containing protein [Paracoccus sp. TRP]
Length=429
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/199 (40%), Positives = 113/199 (57%), Gaps = 3/199 (1%)
Query 8 VVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKEL 67
++ AGP++ +D R+ P + PP+ G + + ++DG F P+V HKE+
Sbjct 4 IIFAGPSLDDSD-RAAWPGLQFQPPVRQGALYAAACLRPRAIGVIDGYFDGVPAVLHKEI 62
Query 68 LTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDG 127
L ++ G+ V G+SSMGALRAAELH FGM G G +FE YRDG L DDEV ++HG +
Sbjct 63 LWALSQGIAVFGASSMGALRAAELHHFGMRGIGRIFEDYRDGRLTDDDEVALLHGPPETA 122
Query 128 YPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV--GAPDQ 185
YP + +VN+R T+ RA A GV+ + A + A+A + R+W +L+ V AP
Sbjct 123 YPALSEPMVNIRATITRAQAEGVLDAAEASALTAAAKALFYQDRSWPEVLAAVPLPAPAC 182
Query 186 RGLAAQLRSLRVDVKHADA 204
L L RVD K DA
Sbjct 183 ERLRDWLPRGRVDRKREDA 201
>gi|126179279|ref|YP_001047244.1| TfuA domain-containing protein [Methanoculleus marisnigri JR1]
gi|125862073|gb|ABN57262.1| TfuA domain protein, core [Methanoculleus marisnigri JR1]
Length=217
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/213 (41%), Positives = 122/213 (58%), Gaps = 7/213 (3%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
+VV GP+ A R+++ DAE PP G L + ++DG+FFQ +V H+E
Sbjct 5 VVVFLGPSCDLAAARAIL-DAEYRPPAKRGDILEAARAGARIIGLIDGVFFQDCAVAHRE 63
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L + GVRVVG+SSMGALRAAEL GMEG G ++ +YR+G L ADDEV ++ D +
Sbjct 64 VLAALRAGVRVVGASSMGALRAAELDSLGMEGVGEIYRAYREGRLVADDEVALLF-DPET 122
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV-GAPDQ 185
P+ + LVN+R T+ RA+ GV+ ++ A ++E ARA F RT+ ++ G D
Sbjct 123 FVPL-SEPLVNIRATIQRALECGVIGADAAGSLLEAARALYFPERTYDAVVEAAEGKADP 181
Query 186 RGLAAQL---RSLRVDVKHADALLALRQLGQRP 215
LA L VD K DALLAL + P
Sbjct 182 DDLARFLAFADEHAVDRKREDALLALEYIRDLP 214
>gi|326795594|ref|YP_004313414.1| TfuA-like core domain-containing protein [Marinomonas mediterranea
MMB-1]
gi|326546358|gb|ADZ91578.1| TfuA-like core domain-containing protein [Marinomonas mediterranea
MMB-1]
Length=370
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/210 (37%), Positives = 112/210 (54%), Gaps = 4/210 (1%)
Query 4 CGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVR 63
++V AGP+I I +P+A+V PP G +L++DG F P+V
Sbjct 2 SSNMIVFAGPSIRKEKILETLPEADVRPPAKQGDVYLATRDKPQVILLIDGFFESVPAVW 61
Query 64 HKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGD 123
HKE+L M++G+ V GSSSMGALRAAEL PFGM G G +FE+Y E DDEV + HG
Sbjct 62 HKEVLYAMSNGIHVYGSSSMGALRAAELVPFGMVGVGDIFENYASLTFEDDDEVALTHGP 121
Query 124 ADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGA- 182
A+ G+ A+ ++RH L A G++ E A+ I ++ + R A L++
Sbjct 122 AELGFMPISRAMADLRHDLTCAKNNGILTEEHAQAIETHLKSLWYPERNHAALITFANTL 181
Query 183 PDQRGLA---AQLRSLRVDVKHADALLALR 209
D R L + L++ V +K DA +R
Sbjct 182 LDSRTLTLLESFLKNEAVSLKEQDAEQLIR 211
>gi|115375279|ref|ZP_01462544.1| hypothetical protein STIAU_4273 [Stigmatella aurantiaca DW4/3-1]
gi|310820218|ref|YP_003952576.1| hypothetical protein STAUR_2957 [Stigmatella aurantiaca DW4/3-1]
gi|115367746|gb|EAU66716.1| hypothetical protein STIAU_4273 [Stigmatella aurantiaca DW4/3-1]
gi|309393290|gb|ADO70749.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length=390
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/177 (44%), Positives = 103/177 (59%), Gaps = 7/177 (3%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFG---QALSYDLRSGDTLLIVDGLFFQQPSVR 63
+VV GP++SA++ R +VP V PP G +ALS R + +VDG+F QPSV
Sbjct 8 LVVFLGPSLSASEARRLVP-CHVLPPARQGDVWRALSLRPR---VIALVDGVFEAQPSVW 63
Query 64 HKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGD 123
H ELL + GV V G +SMGALRAAEL GM G G +FE YRDGV+ D EV ++H
Sbjct 64 HHELLAALEAGVAVFGGASMGALRAAELASHGMVGVGRIFEWYRDGVVADDAEVALLHAT 123
Query 124 ADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
A+ GY LVN+RH A+A V+ A +++ A + RTW R+L+ V
Sbjct 124 AEHGYRPLTVPLVNVRHVAAKAREAKVLSMSQARALVKAAAGIFYQERTWKRVLASV 180
>gi|298675954|ref|YP_003727704.1| TfuA domain-containing protein core [Methanohalobium evestigatum
Z-7303]
gi|298288942|gb|ADI74908.1| TfuA domain protein core [Methanohalobium evestigatum Z-7303]
Length=230
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/213 (33%), Positives = 116/213 (55%), Gaps = 11/213 (5%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLL-IVDGLFFQQPSVRH 64
RI V AG +I+ D + ++ +A+ PP+ + + ++ G ++ I+DG+FF + +V H
Sbjct 16 RITVFAGTSITHEDAKEIL-NADYKPPV-YRCNIDKAMKEGYNIIGIIDGVFFDKAAVSH 73
Query 65 KELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDA 124
KE++ + + V VVG SMGALRA+EL +GM G G ++E YRDGV+EADDEV V
Sbjct 74 KEIIKALKNNVIVVGGCSMGALRASELDDYGMIGAGKIYEQYRDGVIEADDEVAVATN-- 131
Query 125 DDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSE----- 179
D + L+N+R TL A ++ + +IE A+ T + R++ ++ +
Sbjct 132 PDTFEPVSKPLINIRQTLKAAYEDDIIDDKTYSNLIEIAKHTYYPYRSYTGIIKQAVKNN 191
Query 180 -VGAPDQRGLAAQLRSLRVDVKHADALLALRQL 211
+ D + R +D+K DA+ L +
Sbjct 192 ILTKKDSNNILRYCRENEIDIKRQDAIAVLNTI 224
>gi|219851839|ref|YP_002466271.1| TfuA domain protein core [Methanosphaerula palustris E1-9c]
gi|219546098|gb|ACL16548.1| TfuA domain protein core [Methanosphaerula palustris E1-9c]
Length=208
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/205 (38%), Positives = 116/205 (57%), Gaps = 4/205 (1%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKE 66
I+V GP++ R+++ DAE PP G L T++++DG+FFQ SV H+E
Sbjct 4 IIVFLGPSLDLTTARAIL-DAEYRPPARRGDLLQAAKEGAKTIVLIDGVFFQDCSVGHRE 62
Query 67 LLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADD 126
+L + G V+G+SSMGALRA+EL FGM G G V+ YRDG++ +DDEV +++ +
Sbjct 63 VLAAIKLGTTVIGASSMGALRASELDTFGMIGIGEVYRLYRDGIVVSDDEVALIYD--PE 120
Query 127 GYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAPDQR 186
Y + LVN+RH L AV G++ E A I+ R F RT+A +++ G +
Sbjct 121 TYLHLSEPLVNIRHNLDLAVKAGILLPEAAAAILACGRGMYFPDRTYASIIAGSGESGEA 180
Query 187 GLAAQLRSLRVDVKHADALLALRQL 211
L+ ++ D K DA+ AL L
Sbjct 181 FLSFVQKNGE-DQKRLDAIEALTTL 204
>gi|325959955|ref|YP_004291421.1| TfuA-like core domain-containing protein [Methanobacterium sp.
AL-21]
gi|325331387|gb|ADZ10449.1| TfuA-like core domain-containing protein [Methanobacterium sp.
AL-21]
Length=215
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/210 (34%), Positives = 118/210 (57%), Gaps = 5/210 (2%)
Query 1 MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP 60
M +I++ GP++ + +++ A+ PPIA G + D + I+DG+F ++P
Sbjct 1 MVTNKKIIIFTGPSLQPKEAETILK-ADYRPPIARGDIIQALTDEPDIIGIIDGVFHKEP 59
Query 61 SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV 120
+V HKE+L + V VVG +SMGALRA+EL FGM G G V+ Y+ GV+E+DD+V VV
Sbjct 60 AVSHKEILEALKKDVTVVGGASMGALRASELDDFGMVGVGQVYMDYKTGVIESDDDVAVV 119
Query 121 HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
D +AL+++ +T A+ GV+ + +I+TA++ + R+++++ +E
Sbjct 120 IN--PDTMEQLSEALISINYTFKAALKQGVINRSDYDLLIKTAKSIYYPKRSYSKVFAES 177
Query 181 GAPDQRGLAAQ--LRSLRVDVKHADALLAL 208
G + Q L +DVK DAL L
Sbjct 178 GLEKSKVELLQKFLEVHAIDVKRMDALAVL 207
>gi|150378084|ref|YP_001314679.1| TfuA domain-containing protein [Sinorhizobium medicae WSM419]
gi|150032631|gb|ABR64746.1| TfuA domain protein core [Sinorhizobium medicae WSM419]
Length=456
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/223 (35%), Positives = 118/223 (53%), Gaps = 3/223 (1%)
Query 5 GRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRH 64
I V GP+ S + +S++P+A+ PP A G ++++DGLF+ Q SV H
Sbjct 7 NEIAVFLGPSCSIEEAKSILPEADYFPPAARGSIYGIINDGYRMIVLLDGLFYGQYSVWH 66
Query 65 KELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDA 124
KELL + G+ V+G++SMGALRAAEL G+ G G +++ +RDG ++ DDEV ++H +
Sbjct 67 KELLFALDCGIEVIGATSMGALRAAELDCEGVTGVGQIYQWFRDGEIDGDDEVALLHQSS 126
Query 125 DDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAP- 183
+ Y L N+R L A ++ + RI++ A+A F R +LS +
Sbjct 127 EGAYAPLSIPLANLRWNLRLARRECMIDEQQEARILDHAKALCFQDRMMEVVLSPLAKEL 186
Query 184 DQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPP 226
D GL L + D+K D L ALR R+ L P PP
Sbjct 187 DVSGLQKWLETHGEDLKKRDCLEALRFAAS--RIATLGPAQPP 227
>gi|334318880|ref|YP_004551439.1| TfuA-like core domain-containing protein [Sinorhizobium meliloti
AK83]
gi|334099307|gb|AEG57316.1| TfuA-like core domain-containing protein [Sinorhizobium meliloti
AK83]
Length=358
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/207 (38%), Positives = 115/207 (56%), Gaps = 4/207 (1%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHK 65
R+ V GP++ S D + P + G ++ + ++++DG F P+V HK
Sbjct 4 RVTVFVGPSLGQDRPTSPGIDVDYRAPASQGDFIAAAVELPKAMVLIDGYFEHVPAVHHK 63
Query 66 ELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDAD 125
E+L + G+ V G+SS+GALRAAEL FGM G G +++S+ G LE DDEV +VHG A+
Sbjct 64 EILWALDQGIPVYGASSIGALRAAELSRFGMIGVGKIYQSFESGELERDDEVALVHGPAE 123
Query 126 DGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAP-- 183
Y + LVN+R TL+ A+ V+ AE +I A+A + RT+ RLLSE+ +
Sbjct 124 LHYKPLSEPLVNIRSTLSFAIDARVIDEHFAESLINRAKAVFYPERTFGRLLSELDSQAD 183
Query 184 --DQRGLAAQLRSLRVDVKHADALLAL 208
LA+ L S R D K DAL +
Sbjct 184 LVQAERLASWLPSGRRDQKRMDALACI 210
>gi|115377621|ref|ZP_01464817.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310822769|ref|YP_003955127.1| hypothetical protein STAUR_5530 [Stigmatella aurantiaca DW4/3-1]
gi|115365372|gb|EAU64411.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309395841|gb|ADO73300.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length=250
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/217 (38%), Positives = 123/217 (57%), Gaps = 12/217 (5%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHK 65
R++V GP++S + R+VV DA PP G + +VDGLF Q SV HK
Sbjct 3 RLIVFCGPSLSPEEGRAVV-DAVFLPPARQGDLYLAAREKPTAIGLVDGLFDQVNSVAHK 61
Query 66 ELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDAD 125
E+ M+ + V+G ++MGALRA EL FGMEG G +F Y+ G++E DDEV ++HG A+
Sbjct 62 EIRWAMSQEIHVLGGANMGALRAVELAAFGMEGVGTIFGWYQRGLIEDDDEVALIHGAAE 121
Query 126 DGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAPDQ 185
DG+ + +VN+R TL+ A A+GV+ S L ++ + + + R++ +L+ +
Sbjct 122 DGHRPLSEPMVNIRATLSAAEASGVISSTLHGALLGIVKESFYPDRSYPMMLARA---RE 178
Query 186 RGL-AAQLRSLR-------VDVKHADALLALRQLGQR 214
RGL A +L +LR VD K DAL L + R
Sbjct 179 RGLGAGELEALRDFIGTRKVDQKRLDALRLLEVMRDR 215
>gi|336035261|gb|AEH81192.1| TfuA domain protein core [Sinorhizobium meliloti SM11]
Length=456
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/223 (35%), Positives = 117/223 (53%), Gaps = 3/223 (1%)
Query 5 GRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRH 64
I V GP+ S + +S++P+A+ PP A G ++++DGLF+ Q SV H
Sbjct 7 NEIAVFLGPSCSIEEAKSILPEADYFPPAARGSIYGIINDGYRMIVLLDGLFYGQYSVWH 66
Query 65 KELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDA 124
KELL + G+ V+G++SMGALRAAEL G+ G G +++ +RDG ++ DDEV ++H +
Sbjct 67 KELLFALDCGIEVIGATSMGALRAAELDCEGVTGVGQIYQWFRDGEIDGDDEVALLHQSS 126
Query 125 DDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAP- 183
+ Y L N+R L A ++ + RI++ A+A F R +LS +
Sbjct 127 EGAYAPLSIPLANLRWNLRLARRECMIDEQQEARILDHAKALCFQDRMMEVVLSPLAKEL 186
Query 184 DQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPP 226
D GL L + D+K D L AL R+ L P PP
Sbjct 187 DVSGLQKWLETHGEDLKKRDCLEALHFAAS--RIATLGPAQPP 227
>gi|91774003|ref|YP_566695.1| TfuA-like protein [Methanococcoides burtonii DSM 6242]
gi|91713018|gb|ABE52945.1| Hypothetical protein Mbur_2070 [Methanococcoides burtonii DSM
6242]
Length=214
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/212 (39%), Positives = 118/212 (56%), Gaps = 7/212 (3%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHK 65
R VV AG +I D + V+ DA PP+A G + D + I+DG+FF + +V HK
Sbjct 2 RAVVFAGTSICHEDAK-VILDAVYLPPVARGDVDKVVSQGYDIIGIIDGMFFDRAAVAHK 60
Query 66 ELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDAD 125
E+L M G+ VVG SMGALRA+EL GM G G V+E YRDGVLE+DDEV V+ + +
Sbjct 61 EILHAMNKGIIVVGGCSMGALRASELDVHGMIGVGKVYEWYRDGVLESDDEVAVI-TNPE 119
Query 126 DGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLS---EVGA 182
PV V +LVN+R TL A G++ ++ A + +R++ ++ + G
Sbjct 120 TFEPVSV-SLVNIRETLQAACDEGIIDESTRISLLNIAMELHYPLRSYLGIIKTAVDKGV 178
Query 183 -PDQRGLAAQLRSLRVDVKHADALLALRQLGQ 213
P++ L + DVK ADA+L L + +
Sbjct 179 LPEKEPLLNYCLNNETDVKRADAILVLETIKE 210
>gi|338533582|ref|YP_004666916.1| hypothetical protein LILAB_19680 [Myxococcus fulvus HW-1]
gi|337259678|gb|AEI65838.1| hypothetical protein LILAB_19680 [Myxococcus fulvus HW-1]
Length=439
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/177 (42%), Positives = 103/177 (59%), Gaps = 7/177 (3%)
Query 7 IVVTAGPTISAADIRSVVPDAEVAPPIAFG---QALSYDLRSGDTLLIVDGLFFQQPSVR 63
+VV GP++ A+ + + P V PP G +ALS R+ + +VDG+F QPSV
Sbjct 8 LVVFLGPSLPEAEAKRLAP-CTVLPPARQGDVWRALSLRPRA---IALVDGVFEAQPSVW 63
Query 64 HKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGD 123
H ELL + GV V G SMGALRAAEL P G+ G G +FE YRDGV+ D EV ++H D
Sbjct 64 HHELLAALEAGVAVFGGGSMGALRAAELTPHGVVGVGRIFEWYRDGVVVDDSEVALLHAD 123
Query 124 ADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV 180
A+ G+ LVN+R+ RA V+ A+ +++ +A + RTWAR+L V
Sbjct 124 AEHGWRPLTVPLVNVRYAAERAAQARVLGRAAAQALVDAGQAVFYQERTWARVLEAV 180
>gi|20089062|ref|NP_615137.1| hypothetical protein MA0164 [Methanosarcina acetivorans C2A]
gi|19913922|gb|AAM03617.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length=223
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/215 (38%), Positives = 122/215 (57%), Gaps = 11/215 (5%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHK 65
R V+ G +IS D + ++ A PP+ Q + + + I+DG+FF + +V H+
Sbjct 8 RAVIFTGNSISHEDAKKILR-ANYQPPVRRFQLEKFVQQGYKVIGIIDGIFFDRAAVGHR 66
Query 66 ELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDAD 125
E+L+ + GV+VVG +SMGALRA+EL GM G G V+E YRDGV+E+DDEV V + D
Sbjct 67 EILSALNAGVKVVGGASMGALRASELDTHGMVGVGKVYEWYRDGVIESDDEVA-VSTNPD 125
Query 126 DGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGA--- 182
P+ V LVN+R TL A+ TG+V + +++ A T + R++ L E G
Sbjct 126 TFEPISV-PLVNIRETLKAALDTGLVSEKEHNALLDLAINTYYPDRSYLGLTKEGGKKGL 184
Query 183 -PDQRG---LAAQLRSLRVDVKHADALLALRQLGQ 213
P ++G L L S VD+K DA+L L + +
Sbjct 185 IPKEKGKQLLDFCLNS-EVDIKRQDAVLVLETVKK 218
>gi|218682699|ref|ZP_03530300.1| hypothetical protein RetlC8_28168 [Rhizobium etli CIAT 894]
Length=224
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/210 (37%), Positives = 120/210 (58%), Gaps = 6/210 (2%)
Query 2 TACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQAL--SYDLRSGDTLLIVDGLFFQQ 59
A G I+V GPT+ + ++ DA P++ G + ++ R ++++DGLF +
Sbjct 4 KADGPILVFLGPTLGLPQAQRIL-DAVYLQPVSQGDIILAAHAFRP-KAMVLIDGLFEDR 61
Query 60 PSVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGV 119
P+VRHKE+L ++ G+ V+G++SMGALRAAELHPFGM G G ++ YR L A+D V V
Sbjct 62 PAVRHKEILWALSQGIVVIGAASMGALRAAELHPFGMIGVGLIYRWYRRWPLTAEDAVAV 121
Query 120 VHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSE 179
G A+ G+ +ALV+++ + G++ E I AR F R+ ++L+
Sbjct 122 QCGPAELGFTALTEALVDLQRSFTALFRRGLIAKAEMEAGITAARRLNFRDRSLRKVLAA 181
Query 180 VGAPDQRGLAAQLRSLRVDVKHADALLALR 209
P ++ +A LRS + K ADA LALR
Sbjct 182 AQWPAEK--SALLRSHWIAQKKADARLALR 209
>gi|254465774|ref|ZP_05079185.1| TfuA domain protein, core [Rhodobacterales bacterium Y4I]
gi|206686682|gb|EDZ47164.1| TfuA domain protein, core [Rhodobacterales bacterium Y4I]
Length=448
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/224 (38%), Positives = 125/224 (56%), Gaps = 5/224 (2%)
Query 8 VVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKEL 67
VV AGP+I A ++++ +A V PP G + + ++DG F PSV HKE+
Sbjct 4 VVFAGPSIRAEEVQAYF-EATVLPPAGQGDIYRAARQGAKAIGLIDGYFQGVPSVWHKEI 62
Query 68 LTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDG 127
L + G+ V GS+SMGALRAAEL FGM G G ++E+Y G L DDEV V+H A+ G
Sbjct 63 LWALEQGIAVFGSASMGALRAAELSAFGMVGAGSIYEAYASGALIDDDEVAVLHSPAELG 122
Query 128 YPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV-GAPDQR 186
+ + +V++R T+ARA+ V+ ++ A ++ A+A + R W +L++ AP
Sbjct 123 FAPLSEPMVSIRATVARALGDAVLDADQAAAVLNAAKARFYQHRVWDLILADFQAAPWCE 182
Query 187 GLAAQLRSLRVDVKHADA--LLALRQLGQRPRVEPLRPGPPPTV 228
A L+S RVD K DA +LA+ +PL P PP V
Sbjct 183 RFRAWLKSGRVDAKRDDAREMLAVMAAYLNGGRDPL-PAPPLKV 225
>gi|21227559|ref|NP_633481.1| hypothetical protein MM_1457 [Methanosarcina mazei Go1]
gi|20905940|gb|AAM31153.1| conserved protein [Methanosarcina mazei Go1]
Length=225
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/215 (36%), Positives = 124/215 (58%), Gaps = 15/215 (6%)
Query 6 RIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHK 65
+ V+ G +IS D + ++ A PP+ Q + + + I+DG+FF + +V H+
Sbjct 8 KAVIFTGNSISHEDAKKILL-ANYQPPVRRFQLEKFIQQGYKVMGIIDGIFFDRAAVGHR 66
Query 66 ELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDAD 125
E+++ + GVRVVG +SMGALRA+EL GM G G V+E YRDGV+E+DDEV + + +
Sbjct 67 EIISALNAGVRVVGGASMGALRASELDTHGMIGVGKVYEWYRDGVIESDDEVA-ISTNPE 125
Query 126 DGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEVGAPDQ 185
P+ V LVN+R TL A+ G++ + E I+E A +T + R++ L E GA +
Sbjct 126 TFEPISV-PLVNIRETLKAALGAGILSEKEYEDILELAISTYYPDRSYLGLTKE-GA--K 181
Query 186 RGLAAQLR---------SLRVDVKHADALLALRQL 211
+GL ++ + + VDVK DA+L + +
Sbjct 182 KGLISEEKRKLLLDFCINSEVDVKKRDAVLVIETV 216
Lambda K H
0.321 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1068463081388
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40