BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1378c Length=475 Score E Sequences producing significant alignments: (Bits) Value gi|15608518|ref|NP_215894.1| hypothetical protein Rv1378c [Mycob... 940 0.0 gi|308375447|ref|ZP_07443945.2| hypothetical protein TMGG_01948 ... 937 0.0 gi|121637308|ref|YP_977531.1| hypothetical protein BCG_1439c [My... 936 0.0 gi|289574045|ref|ZP_06454272.1| conserved hypothetical protein [... 935 0.0 gi|340626392|ref|YP_004744844.1| hypothetical protein MCAN_13941... 935 0.0 gi|31792572|ref|NP_855065.1| hypothetical protein Mb1413c [Mycob... 935 0.0 gi|339631445|ref|YP_004723087.1| hypothetical protein MAF_14000 ... 935 0.0 gi|15840836|ref|NP_335873.1| hypothetical protein MT1422 [Mycoba... 935 0.0 gi|289554832|ref|ZP_06444042.1| conserved hypothetical protein [... 872 0.0 gi|254550391|ref|ZP_05140838.1| hypothetical protein Mtube_08010... 845 0.0 gi|323720131|gb|EGB29235.1| hypothetical protein TMMG_02079 [Myc... 844 0.0 gi|308371953|ref|ZP_07667276.1| hypothetical protein TMDG_03491 ... 827 0.0 gi|307083945|ref|ZP_07493058.1| hypothetical protein TMLG_03064 ... 707 0.0 gi|108798576|ref|YP_638773.1| hypothetical protein Mmcs_1606 [My... 576 4e-162 gi|342860971|ref|ZP_08717620.1| hypothetical protein MCOL_18907 ... 558 5e-157 gi|183981600|ref|YP_001849891.1| hypothetical protein MMAR_1584 ... 552 5e-155 gi|126432903|ref|YP_001068594.1| hypothetical protein Mjls_0290 ... 550 3e-154 gi|339295909|gb|AEJ48020.1| hypothetical protein CCDC5079_2830 [... 549 4e-154 gi|254365702|ref|ZP_04981747.1| conserved hypothetical protein [... 547 1e-153 gi|15610211|ref|NP_217590.1| hypothetical protein Rv3074 [Mycoba... 539 5e-151 gi|340628065|ref|YP_004746517.1| hypothetical protein MCAN_31001... 538 6e-151 gi|167969679|ref|ZP_02551956.1| hypothetical protein MtubH3_1730... 537 1e-150 gi|108797279|ref|YP_637476.1| hypothetical protein Mmcs_0299 [My... 533 3e-149 gi|41409249|ref|NP_962085.1| hypothetical protein MAP3151 [Mycob... 533 3e-149 gi|108801662|ref|YP_641859.1| hypothetical protein Mmcs_4699 [My... 521 1e-145 gi|118464996|ref|YP_883136.1| hypothetical protein MAV_3980 [Myc... 521 1e-145 gi|126437648|ref|YP_001073339.1| hypothetical protein Mjls_5084 ... 520 2e-145 gi|296169248|ref|ZP_06850901.1| HNH nuclease [Mycobacterium para... 512 4e-143 gi|254776396|ref|ZP_05217912.1| hypothetical protein MaviaA2_172... 504 1e-140 gi|118469447|ref|YP_890248.1| hypothetical protein MSMEG_6025 [M... 496 4e-138 gi|120405676|ref|YP_955505.1| hypothetical protein Mvan_4725 [My... 493 4e-137 gi|254364267|ref|ZP_04980313.1| conserved hypothetical protein [... 487 2e-135 gi|289755191|ref|ZP_06514569.1| LOW QUALITY PROTEIN: conserved h... 477 2e-132 gi|254821166|ref|ZP_05226167.1| hypothetical protein MintA_14612... 473 3e-131 gi|315446192|ref|YP_004079071.1| hypothetical protein Mspyr1_469... 471 1e-130 gi|145223173|ref|YP_001133851.1| hypothetical protein Mflv_2586 ... 467 3e-129 gi|120406245|ref|YP_956074.1| hypothetical protein Mvan_5297 [My... 466 6e-129 gi|145224332|ref|YP_001135010.1| HNH nuclease [Mycobacterium gil... 464 1e-128 gi|315444664|ref|YP_004077543.1| hypothetical protein Mspyr1_309... 462 5e-128 gi|120404582|ref|YP_954411.1| hypothetical protein Mvan_3614 [My... 454 1e-125 gi|169628995|ref|YP_001702644.1| hypothetical protein MAB_1907 [... 447 2e-123 gi|145223484|ref|YP_001134162.1| HNH nuclease [Mycobacterium gil... 441 1e-121 gi|240168682|ref|ZP_04747341.1| hypothetical protein MkanA1_0517... 436 6e-120 gi|339294355|gb|AEJ46466.1| hypothetical protein CCDC5079_1276 [... 425 8e-117 gi|226361477|ref|YP_002779255.1| hypothetical protein ROP_20630 ... 397 2e-108 gi|119963190|ref|YP_946206.1| hypothetical protein AAur_0393 [Ar... 393 4e-107 gi|111019339|ref|YP_702311.1| hypothetical protein RHA1_ro02347 ... 387 3e-105 gi|298526546|ref|ZP_07013955.1| conserved hypothetical protein [... 382 6e-104 gi|111023031|ref|YP_706003.1| hypothetical protein RHA1_ro06068 ... 382 7e-104 gi|119962228|ref|YP_946315.1| HNH endonuclease domain-containing... 379 6e-103 >gi|15608518|ref|NP_215894.1| hypothetical protein Rv1378c [Mycobacterium tuberculosis H37Rv] gi|148661169|ref|YP_001282692.1| hypothetical protein MRA_1387 [Mycobacterium tuberculosis H37Ra] gi|167968430|ref|ZP_02550707.1| hypothetical protein MtubH3_10496 [Mycobacterium tuberculosis H37Ra] gi|1621260|emb|CAB02639.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505321|gb|ABQ73130.1| hypothetical protein MRA_1387 [Mycobacterium tuberculosis H37Ra] Length=475 Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/475 (100%), Positives = 475/475 (100%), Gaps = 0/475 (0%) Query 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD 60 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD Sbjct 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD 60 Query 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR Sbjct 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 Query 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL Sbjct 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 Query 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL Sbjct 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 Query 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL Sbjct 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 Query 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP Sbjct 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 Query 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR Sbjct 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 Query 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 >gi|308375447|ref|ZP_07443945.2| hypothetical protein TMGG_01948 [Mycobacterium tuberculosis SUMu007] gi|308346301|gb|EFP35152.1| hypothetical protein TMGG_01948 [Mycobacterium tuberculosis SUMu007] Length=503 Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/475 (99%), Positives = 474/475 (99%), Gaps = 0/475 (0%) Query 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD 60 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWP WPRPAILEHMFDLVSLAGVDSRD Sbjct 29 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRD 88 Query 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR Sbjct 89 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 148 Query 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL Sbjct 149 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 208 Query 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL Sbjct 209 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 268 Query 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL Sbjct 269 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 328 Query 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP Sbjct 329 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 388 Query 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR Sbjct 389 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 448 Query 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 449 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 503 >gi|121637308|ref|YP_977531.1| hypothetical protein BCG_1439c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822599|ref|YP_001287352.1| hypothetical protein TBFG_11407 [Mycobacterium tuberculosis F11] gi|224989783|ref|YP_002644470.1| hypothetical protein JTY_1414 [Mycobacterium bovis BCG str. Tokyo 172] 29 more sequence titles Length=475 Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/475 (99%), Positives = 474/475 (99%), Gaps = 0/475 (0%) Query 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD 60 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWP WPRPAILEHMFDLVSLAGVDSRD Sbjct 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRD 60 Query 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR Sbjct 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 Query 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL Sbjct 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 Query 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL Sbjct 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 Query 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL Sbjct 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 Query 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP Sbjct 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 Query 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR Sbjct 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 Query 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 >gi|289574045|ref|ZP_06454272.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289538476|gb|EFD43054.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=475 Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/475 (99%), Positives = 474/475 (99%), Gaps = 0/475 (0%) Query 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD 60 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWP WPRPAILEHMFDLVSLAGVDSRD Sbjct 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRD 60 Query 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAG+PARRRGRGVASEVALAR Sbjct 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGLPARRRGRGVASEVALAR 120 Query 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL Sbjct 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 Query 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL Sbjct 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 Query 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL Sbjct 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 Query 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP Sbjct 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 Query 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR Sbjct 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 Query 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 >gi|340626392|ref|YP_004744844.1| hypothetical protein MCAN_13941 [Mycobacterium canettii CIPT 140010059] gi|340004582|emb|CCC43726.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=475 Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/475 (99%), Positives = 473/475 (99%), Gaps = 0/475 (0%) Query 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD 60 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWP WPRPAILEH FDLVSLAGVDSRD Sbjct 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPCWPRPAILEHTFDLVSLAGVDSRD 60 Query 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR Sbjct 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 Query 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL Sbjct 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 Query 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL Sbjct 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 Query 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL Sbjct 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 Query 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP Sbjct 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 Query 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR Sbjct 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 Query 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 >gi|31792572|ref|NP_855065.1| hypothetical protein Mb1413c [Mycobacterium bovis AF2122/97] gi|31618161|emb|CAD94274.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] Length=475 Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/475 (99%), Positives = 473/475 (99%), Gaps = 0/475 (0%) Query 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD 60 MGNLDLLL LSGRIVKGCRPLGSVALARCGPAVRWP WPRPAILEHMFDLVSLAGVDSRD Sbjct 1 MGNLDLLLHLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRD 60 Query 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR Sbjct 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 Query 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL Sbjct 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 Query 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL Sbjct 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 Query 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL Sbjct 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 Query 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP Sbjct 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 Query 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR Sbjct 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 Query 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 >gi|339631445|ref|YP_004723087.1| hypothetical protein MAF_14000 [Mycobacterium africanum GM041182] gi|339330801|emb|CCC26472.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=475 Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/475 (99%), Positives = 474/475 (99%), Gaps = 0/475 (0%) Query 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD 60 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWP WPRPAILEHMFDLVSLAGVDSRD Sbjct 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRD 60 Query 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR Sbjct 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 Query 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACL+VEDRRALDAEL Sbjct 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLEVEDRRALDAEL 180 Query 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL Sbjct 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 Query 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL Sbjct 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 Query 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP Sbjct 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 Query 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR Sbjct 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 Query 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 >gi|15840836|ref|NP_335873.1| hypothetical protein MT1422 [Mycobacterium tuberculosis CDC1551] gi|13881034|gb|AAK45687.1| hypothetical protein MT1422 [Mycobacterium tuberculosis CDC1551] Length=475 Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/475 (99%), Positives = 474/475 (99%), Gaps = 0/475 (0%) Query 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPRWPRPAILEHMFDLVSLAGVDSRD 60 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWP WPRPAILEHMFDLVSLAGVDSRD Sbjct 1 MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRD 60 Query 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR Sbjct 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 Query 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL Sbjct 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 Query 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL Sbjct 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 Query 241 PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 PVARGVSVYAALKRAA+TTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL Sbjct 241 PVARGVSVYAALKRAAETTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL 300 Query 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP Sbjct 301 AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP 360 Query 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR Sbjct 361 KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR 420 Query 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 421 VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 >gi|289554832|ref|ZP_06444042.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289439464|gb|EFD21957.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length=443 Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/443 (99%), Positives = 442/443 (99%), Gaps = 0/443 (0%) Query 33 VRWPRWPRPAILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDK 92 +RWP WPRPAILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDK Sbjct 1 MRWPWWPRPAILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDK 60 Query 93 LRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGR 152 LRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGR Sbjct 61 LRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGR 120 Query 153 LSEWRATLIVRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVV 212 LSEWRATLIVRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVV Sbjct 121 LSEWRATLIVRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVV 180 Query 213 ERAARAETERTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADT 272 ERAARAETERTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADT Sbjct 181 ERAARAETERTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADT 240 Query 273 LVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTR 332 LVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTR Sbjct 241 LVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTR 300 Query 333 SRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPH 392 SRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPH Sbjct 301 SRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPH 360 Query 393 HRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG 452 HRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG Sbjct 361 HRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG 420 Query 453 PLEIDVSQVEARIGVALTHLHAA 475 PLEIDVSQVEARIGVALTHLHAA Sbjct 421 PLEIDVSQVEARIGVALTHLHAA 443 >gi|254550391|ref|ZP_05140838.1| hypothetical protein Mtube_08010 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308231826|ref|ZP_07663944.1| hypothetical protein TMAG_03382 [Mycobacterium tuberculosis SUMu001] gi|308369785|ref|ZP_07666807.1| hypothetical protein TMBG_01206 [Mycobacterium tuberculosis SUMu002] 11 more sequence titles Length=429 Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/429 (100%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR Sbjct 1 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 60 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA Sbjct 61 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 120 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI Sbjct 121 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 180 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ Sbjct 181 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 240 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS Sbjct 241 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 300 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS Sbjct 301 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 360 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIG 466 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIG Sbjct 361 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIG 420 Query 467 VALTHLHAA 475 VALTHLHAA Sbjct 421 VALTHLHAA 429 >gi|323720131|gb|EGB29235.1| hypothetical protein TMMG_02079 [Mycobacterium tuberculosis CDC1551A] Length=429 Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/429 (99%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR Sbjct 1 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 60 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA Sbjct 61 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 120 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI Sbjct 121 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 180 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAPDTMTWVTALLPVARGVSVYAALKRAA+TTFDDRTRGQVMADTLVERVTGQPAEAAQ Sbjct 181 RPAPDTMTWVTALLPVARGVSVYAALKRAAETTFDDRTRGQVMADTLVERVTGQPAEAAQ 240 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS Sbjct 241 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 300 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS Sbjct 301 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 360 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIG 466 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIG Sbjct 361 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIG 420 Query 467 VALTHLHAA 475 VALTHLHAA Sbjct 421 VALTHLHAA 429 >gi|308371953|ref|ZP_07667276.1| hypothetical protein TMDG_03491 [Mycobacterium tuberculosis SUMu004] gi|308377714|ref|ZP_07668578.1| hypothetical protein TMIG_03060 [Mycobacterium tuberculosis SUMu009] gi|308380062|ref|ZP_07669111.1| hypothetical protein TMKG_01882 [Mycobacterium tuberculosis SUMu011] gi|308334956|gb|EFP23807.1| hypothetical protein TMDG_03491 [Mycobacterium tuberculosis SUMu004] gi|308354872|gb|EFP43723.1| hypothetical protein TMIG_03060 [Mycobacterium tuberculosis SUMu009] gi|308362760|gb|EFP51611.1| hypothetical protein TMKG_01882 [Mycobacterium tuberculosis SUMu011] Length=420 Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/420 (99%), Positives = 420/420 (100%), Gaps = 0/420 (0%) Query 56 VDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASE 115 +DSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASE Sbjct 1 MDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASE 60 Query 116 VALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRA 175 VALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRA Sbjct 61 VALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRA 120 Query 176 LDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTW 235 LDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTW Sbjct 121 LDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTW 180 Query 236 VTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS 295 VTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS Sbjct 181 VTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS 240 Query 296 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR 355 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR Sbjct 241 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR 300 Query 356 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE 415 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE Sbjct 301 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE 360 Query 416 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 361 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 420 >gi|307083945|ref|ZP_07493058.1| hypothetical protein TMLG_03064 [Mycobacterium tuberculosis SUMu012] gi|308366414|gb|EFP55265.1| hypothetical protein TMLG_03064 [Mycobacterium tuberculosis SUMu012] Length=353 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/353 (100%), Positives = 353/353 (100%), Gaps = 0/353 (0%) Query 123 SPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCA 182 SPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCA Sbjct 1 SPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCA 60 Query 183 DMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPV 242 DMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPV Sbjct 61 DMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPV 120 Query 243 ARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAG 302 ARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAG Sbjct 121 ARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAG 180 Query 303 DRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKG 362 DRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKG Sbjct 181 DRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKG 240 Query 363 LAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVS 422 LAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVS Sbjct 241 LAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVS 300 Query 423 TDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 TDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 301 TDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 353 >gi|108798576|ref|YP_638773.1| hypothetical protein Mmcs_1606 [Mycobacterium sp. MCS] gi|119867676|ref|YP_937628.1| hypothetical protein Mkms_1631 [Mycobacterium sp. KMS] gi|108768995|gb|ABG07717.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119693765|gb|ABL90838.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=430 Score = 576 bits (1484), Expect = 4e-162, Method: Compositional matrix adjust. Identities = 312/434 (72%), Positives = 346/434 (80%), Gaps = 11/434 (2%) Query 43 ILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAG 102 ILEHMF+ E +L RIA LER KSAAAA QARA A LD+ RR EA AG Sbjct 7 ILEHMFEA----------SETALIERIAALERAKSAAAAAQARATALLDEKRRAAEAAAG 56 Query 103 VPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIV 162 VPA +RGRG+ASEVALAR D P +GGRHLGFA+ALV+EMPHTLAALE G LSEWRATLIV Sbjct 57 VPANKRGRGLASEVALARHDCPNKGGRHLGFARALVHEMPHTLAALECGALSEWRATLIV 116 Query 163 RESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETER 222 RESACL VEDRR LDAELC D+S L+G+GD RI A A+ IAYRLD QAVV+RAA+A +ER Sbjct 117 RESACLSVEDRRMLDAELCRDVSRLEGLGDKRIEAEAKRIAYRLDPQAVVDRAAKAASER 176 Query 223 TVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPA 282 TVT RPAPDTMT+VTALLPVA+GV+VYAALKR+ADTTFDDR+RGQVMADTLVERVTG PA Sbjct 177 TVTCRPAPDTMTYVTALLPVAQGVAVYAALKRSADTTFDDRSRGQVMADTLVERVTGCPA 236 Query 283 EAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYR 342 E A PVAVNLV++DE LL GD PAV+ GYGP+PAAV R LV AV D RS+ATLRRLYR Sbjct 237 EVAVPVAVNLVITDEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVTDKRSKATLRRLYR 296 Query 343 HPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATN 402 PRSGALVAMESR+R FPKGLAAFI LRDQ CR PYCDAPIRH DHA+PH GGPT+A N Sbjct 297 RPRSGALVAMESRSRCFPKGLAAFIDLRDQTCRTPYCDAPIRHHDHARPHRAGGPTSAAN 356 Query 403 GLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVE 462 GLG C CNY KEAPGWRV+T D GRH A FTTPTG YH TAPP PG +++S +E Sbjct 357 GLGECAACNYAKEAPGWRVATSCDAEGRHRATFTTPTGTQYHSTAPPSPGMTVVNLSDLE 416 Query 463 ARIGVALTHL-HAA 475 RIG+ L HAA Sbjct 417 VRIGIELAAFRHAA 430 >gi|342860971|ref|ZP_08717620.1| hypothetical protein MCOL_18907 [Mycobacterium colombiense CECT 3035] gi|342131415|gb|EGT84685.1| hypothetical protein MCOL_18907 [Mycobacterium colombiense CECT 3035] Length=424 Score = 558 bits (1439), Expect = 5e-157, Method: Compositional matrix adjust. Identities = 322/429 (76%), Positives = 350/429 (82%), Gaps = 5/429 (1%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MF+ LA VD DE++L RIAELE KSAAAAGQARAAA LD LRR EA AGVPA Sbjct 1 MFE--ELATVDPAADESALIERIAELETAKSAAAAGQARAAAELDALRRATEAAAGVPAT 58 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRGRGVA EVALARRD+P+RGGRHLGFA ALV+EMPHTLAALE G LSEWRATLIVRESA Sbjct 59 RRGRGVAGEVALARRDAPSRGGRHLGFATALVHEMPHTLAALECGALSEWRATLIVRESA 118 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CLDVEDRRALDAELCAD+++L G+GDAR+AAAA+AIAYRLD AVVERAA+AE ERTVTI Sbjct 119 CLDVEDRRALDAELCADLASLSGLGDARVAAAAKAIAYRLDPHAVVERAAKAENERTVTI 178 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAPDTMT++TALLPVA+GVSVYAAL+R ADT D R RGQVMADTLVER+TG+ A Sbjct 179 RPAPDTMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERITGRSASVPV 238 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 P AVNLVLSDETLL GD APA + GYGP+PA VAR +V AV D RSRATLRRLY HPR+ Sbjct 239 PTAVNLVLSDETLLGGDDAPATISGYGPVPAPVARAMVAGAVTDRRSRATLRRLYAHPRA 298 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 GALVAMESRAR FP+GLA FIGLRDQ CR PYCDAP+RHRDHA+P RGG TTA NGLG Sbjct 299 GALVAMESRARIFPRGLAEFIGLRDQSCRTPYCDAPVRHRDHAKPWARGGRTTADNGLGL 358 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIG 466 CE CNYVKE GWRVST DE HTA FTTPTG Y TAP P L I VS+VE RIG Sbjct 359 CEACNYVKENAGWRVSTAVDENHTHTALFTTPTGKSYRSTAP--PPVLRITVSEVELRIG 416 Query 467 VALTHLHAA 475 V+L HAA Sbjct 417 VSLAR-HAA 424 >gi|183981600|ref|YP_001849891.1| hypothetical protein MMAR_1584 [Mycobacterium marinum M] gi|183174926|gb|ACC40036.1| conserved hypothetical protein [Mycobacterium marinum M] Length=424 Score = 552 bits (1423), Expect = 5e-155, Method: Compositional matrix adjust. Identities = 320/429 (75%), Positives = 355/429 (83%), Gaps = 5/429 (1%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MF+ SLA VD D+A+L RIAELE VKSAAAAGQARAAAALD RR E+ AGVPA Sbjct 1 MFE--SLAAVDPAADQAALVERIAELETVKSAAAAGQARAAAALDTARRAAESAAGVPAA 58 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRGRG+A+E+ALARRDSPARG RHLGFAKALV+EMPHTLAALE G LSEWRATLIVRESA Sbjct 59 RRGRGLANEIALARRDSPARGSRHLGFAKALVHEMPHTLAALECGLLSEWRATLIVRESA 118 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CLD+E RR LDAELC D S L+GMGDAR+AAAA+AIAYRLD AVV+RAA+AE ERTVTI Sbjct 119 CLDIEHRRELDAELCGDPSGLEGMGDARVAAAAKAIAYRLDPHAVVDRAAKAERERTVTI 178 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAPDTMT++TALLPVA+G+SVYAAL+RAADT D R+RGQVMADTLVERVTG+ A Sbjct 179 RPAPDTMTYLTALLPVAQGISVYAALRRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 P+AVNLVL+DE+LL D APA V GYGPIPAAVAR +V DAVAD RSRATLRRLY HPR+ Sbjct 239 PIAVNLVLTDESLLGADSAPADVCGYGPIPAAVARTMVADAVADGRSRATLRRLYAHPRA 298 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 GALVAMESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA+P +GGPTTA NGLGS Sbjct 299 GALVAMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHARPWAKGGPTTADNGLGS 358 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIG 466 CERCNY KEA GWRV T ET HTAEFTTPTG Y APP + S++E R+G Sbjct 359 CERCNYAKEAYGWRVETSMHETHTHTAEFTTPTGTSYRSGAPPRVQ--TVTASELEVRVG 416 Query 467 VALTHLHAA 475 ++L HAA Sbjct 417 ISLAR-HAA 424 >gi|126432903|ref|YP_001068594.1| hypothetical protein Mjls_0290 [Mycobacterium sp. JLS] gi|126232703|gb|ABN96103.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=411 Score = 550 bits (1416), Expect = 3e-154, Method: Compositional matrix adjust. Identities = 300/397 (76%), Positives = 332/397 (84%), Gaps = 0/397 (0%) Query 56 VDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASE 115 VD+ DEA+L RIA LER KSAAAA QARA A LD+ RR EA AGVPA +RGRG+ASE Sbjct 2 VDTEIDEAALIERIAALERAKSAAAAAQARATALLDEKRRAAEAAAGVPANKRGRGLASE 61 Query 116 VALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRA 175 VALAR D P +GGRHLGFA+ LV+EMPHTLAALE G LSEWRATLIVRESACL VEDRR+ Sbjct 62 VALARHDCPNKGGRHLGFARVLVHEMPHTLAALECGALSEWRATLIVRESACLSVEDRRS 121 Query 176 LDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTW 235 LD ELC D+S+L+G+GD RI A A+ IAYRLD QAVV+RAARA +ERTVT RPAPDTMT+ Sbjct 122 LDTELCRDVSSLEGLGDKRIEAEAKKIAYRLDPQAVVDRAARAASERTVTCRPAPDTMTY 181 Query 236 VTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS 295 VTALLPVA+GV+VYAALKR+ADTTFDDR+RGQVMADTLVERVTG PAE A PVAVNLV++ Sbjct 182 VTALLPVAQGVAVYAALKRSADTTFDDRSRGQVMADTLVERVTGCPAEVAVPVAVNLVIT 241 Query 296 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR 355 DE LL GD PAV+ GYGP+PAAV R LV AV D RS+ATLRRLYR PRSGALVAMESR Sbjct 242 DEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVTDKRSKATLRRLYRRPRSGALVAMESR 301 Query 356 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE 415 AR FPKGLAAFI LRDQ CR PYC+APIRH DHA+PH GGPT+A NGLG CE+CNY KE Sbjct 302 ARCFPKGLAAFIDLRDQTCRTPYCNAPIRHHDHARPHRAGGPTSAANGLGECEQCNYAKE 361 Query 416 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG 452 APGW+V+ DETG HTAEFTTPTG Y TAP PG Sbjct 362 APGWQVTAAIDETGTHTAEFTTPTGAVYRSTAPSPPG 398 >gi|339295909|gb|AEJ48020.1| hypothetical protein CCDC5079_2830 [Mycobacterium tuberculosis CCDC5079] Length=432 Score = 549 bits (1415), Expect = 4e-154, Method: Compositional matrix adjust. Identities = 317/429 (74%), Positives = 352/429 (83%), Gaps = 6/429 (1%) Query 42 AILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADA 101 AILEHMF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E A Sbjct 4 AILEHMFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAA 61 Query 102 GVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLI 161 GVPA RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLI Sbjct 62 GVPAARRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLI 121 Query 162 VRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETE 221 VRESACLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE + Sbjct 122 VRESACLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAEND 181 Query 222 RTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQP 281 RTVTIRPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ Sbjct 182 RTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRD 241 Query 282 AEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLY 341 A P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY Sbjct 242 AAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLY 301 Query 342 RHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTAT 401 HP++GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A Sbjct 302 AHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAH 361 Query 402 NGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQ 460 NGLG+CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS+ Sbjct 362 NGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSE 418 Query 461 VEARIGVAL 469 +E RIG+AL Sbjct 419 LEVRIGIAL 427 >gi|254365702|ref|ZP_04981747.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|134151215|gb|EBA43260.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length=432 Score = 547 bits (1410), Expect = 1e-153, Method: Compositional matrix adjust. Identities = 316/429 (74%), Positives = 352/429 (83%), Gaps = 6/429 (1%) Query 42 AILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADA 101 AILEH+F+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E A Sbjct 4 AILEHIFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAA 61 Query 102 GVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLI 161 GVPA RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLI Sbjct 62 GVPAARRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLI 121 Query 162 VRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETE 221 VRESACLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE + Sbjct 122 VRESACLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAEND 181 Query 222 RTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQP 281 RTVTIRPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ Sbjct 182 RTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRD 241 Query 282 AEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLY 341 A P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY Sbjct 242 AAVPTPIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLY 301 Query 342 RHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTAT 401 HP++GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A Sbjct 302 AHPQAGALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAH 361 Query 402 NGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQ 460 NGLG+CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS+ Sbjct 362 NGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSE 418 Query 461 VEARIGVAL 469 +E RIG+AL Sbjct 419 LEVRIGIAL 427 >gi|15610211|ref|NP_217590.1| hypothetical protein Rv3074 [Mycobacterium tuberculosis H37Rv] gi|15842644|ref|NP_337681.1| hypothetical protein MT3159 [Mycobacterium tuberculosis CDC1551] gi|31794253|ref|NP_856746.1| hypothetical protein Mb3101 [Mycobacterium bovis AF2122/97] 62 more sequence titles Length=424 Score = 539 bits (1388), Expect = 5e-151, Method: Compositional matrix adjust. Identities = 312/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 465 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 Query 466 GVAL 469 G+AL Sbjct 416 GIAL 419 >gi|340628065|ref|YP_004746517.1| hypothetical protein MCAN_31001 [Mycobacterium canettii CIPT 140010059] gi|340006255|emb|CCC45431.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=424 Score = 538 bits (1387), Expect = 6e-151, Method: Compositional matrix adjust. Identities = 312/424 (74%), Positives = 346/424 (82%), Gaps = 6/424 (1%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MFD +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 1 MFD--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ Sbjct 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDTAVPT 238 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 P+AVNLV+SDETLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 239 PIAVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 465 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 Query 466 GVAL 469 G+AL Sbjct 416 GIAL 419 >gi|167969679|ref|ZP_02551956.1| hypothetical protein MtubH3_17308 [Mycobacterium tuberculosis H37Ra] Length=424 Score = 537 bits (1384), Expect = 1e-150, Method: Compositional matrix adjust. Identities = 311/424 (74%), Positives = 347/424 (82%), Gaps = 6/424 (1%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MF+ +L +D +EA+L RIAELER+KSAAAAGQARAAAA+D RR E AGVPA Sbjct 1 MFE--TLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAA 58 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRGRG+ASE+ALARRDSPARG RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESA Sbjct 59 RRGRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESA 118 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CLDV DRRALDAELC D L+GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTI Sbjct 119 CLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTI 178 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAPDTMT++TALLPVA+GVSVYAAL RAADT D R+RGQVMADTLVERVTG+ A Sbjct 179 RPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPT 238 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 P+AVNLV+SD+TLL PA + GYGPIPAAVAR +V AV D RSRATLRRLY HP++ Sbjct 239 PIAVNLVMSDDTLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQA 298 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 GALV+MESRAR FP+GLAAFI LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+ Sbjct 299 GALVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGT 358 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARI 465 CERCNY K+APGWRVST DE HTAEF TPTG + APP LP + VS++E RI Sbjct 359 CERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRI 415 Query 466 GVAL 469 G+AL Sbjct 416 GIAL 419 >gi|108797279|ref|YP_637476.1| hypothetical protein Mmcs_0299 [Mycobacterium sp. MCS] gi|119866364|ref|YP_936316.1| hypothetical protein Mkms_0309 [Mycobacterium sp. KMS] gi|108767698|gb|ABG06420.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692453|gb|ABL89526.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=377 Score = 533 bits (1373), Expect = 3e-149, Method: Compositional matrix adjust. Identities = 277/363 (77%), Positives = 307/363 (85%), Gaps = 0/363 (0%) Query 90 LDKLRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALE 149 LD+ RR EA AGVPA +RGRG+ASEVALAR D P +GGRHLGFA+ LV+EMPHTLAALE Sbjct 2 LDEKRRAAEAAAGVPANKRGRGLASEVALARHDCPNKGGRHLGFARVLVHEMPHTLAALE 61 Query 150 VGRLSEWRATLIVRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQ 209 G LSEWRATLIVRESACL VEDRR+LD ELC D+S+L+G+GD RI A A+ IAYRLD Q Sbjct 62 CGALSEWRATLIVRESACLSVEDRRSLDTELCRDVSSLEGLGDKRIEAEAKKIAYRLDPQ 121 Query 210 AVVERAARAETERTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVM 269 AVV+RAARA +ERTVT RPAPDTMT+VTALLPVA+GV+VYAALKR+ADTTFDDR+RGQVM Sbjct 122 AVVDRAARAASERTVTCRPAPDTMTYVTALLPVAQGVAVYAALKRSADTTFDDRSRGQVM 181 Query 270 ADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVA 329 ADTLVERVTG PAE A PVAVNLV++DE LL GD PAV+ GYGP+PAAV R LV AV Sbjct 182 ADTLVERVTGCPAEVAVPVAVNLVITDEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVT 241 Query 330 DTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHA 389 D RS+ATLRRLYR PRSGALVAMESRAR FPKGLAAFI LRDQ CR PYC+APIRH DHA Sbjct 242 DKRSKATLRRLYRRPRSGALVAMESRARCFPKGLAAFIDLRDQTCRTPYCNAPIRHHDHA 301 Query 390 QPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP 449 +PH GGPT+A NGLG CE+CNY KEAPGW+V+ DETG HTAEFTTPTG Y TAP Sbjct 302 RPHRAGGPTSAANGLGECEQCNYAKEAPGWQVTAAIDETGTHTAEFTTPTGAVYRSTAPS 361 Query 450 LPG 452 PG Sbjct 362 PPG 364 >gi|41409249|ref|NP_962085.1| hypothetical protein MAP3151 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398069|gb|AAS05699.1| hypothetical protein MAP_3151 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459196|gb|EGO38141.1| hypothetical protein MAPs_04970 [Mycobacterium avium subsp. paratuberculosis S397] Length=428 Score = 533 bits (1372), Expect = 3e-149, Method: Compositional matrix adjust. Identities = 322/434 (75%), Positives = 349/434 (81%), Gaps = 7/434 (1%) Query 43 ILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAG 102 ++EH+F+ SL VD E++L RI+ELE +K AAAA QARAAAALD RR EA AG Sbjct 1 MIEHVFE--SLMAVDPAAGESALIERISELEMLKCAAAAAQARAAAALDAARRAAEAAAG 58 Query 103 VPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIV 162 VPA RRGRGVASEVALARRDSPARGGRHLGFAKALV+EMPHTLAALE G LSEWRATLIV Sbjct 59 VPAARRGRGVASEVALARRDSPARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIV 118 Query 163 RESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETER 222 RESACLD EDRRALDAELCAD + L GMGDAR+AAAA+AIAYRLD AVVERAA+AE +R Sbjct 119 RESACLDAEDRRALDAELCADPAGLSGMGDARVAAAAKAIAYRLDPHAVVERAAKAENDR 178 Query 223 TVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPA 282 TVTIRPAPDTMT++TALLPVA+GVSVYAAL+R ADT D R RGQVMADTLVERVTG+ A Sbjct 179 TVTIRPAPDTMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRA 238 Query 283 EAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYR 342 PVAVNLVLSDETLL G AP + GYGPIPAAVAR +V +A AD RSRATLRRLY Sbjct 239 TVPTPVAVNLVLSDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYA 298 Query 343 HPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATN 402 HPR+GALVAMESRAR FP+GLA FIGLRDQRCR PYCDAPIRHRDHAQP GG T+A N Sbjct 299 HPRAGALVAMESRARLFPQGLARFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGN 358 Query 403 GLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQV 461 GLG CE CNYVKE PGW VS DET HTA FTTPTG Y TAPP P I +S V Sbjct 359 GLGLCEHCNYVKETPGWTVSAGVDETHTHTALFTTPTGQTYRSTAPPRAPA---ITMSTV 415 Query 462 EARIGVALTHLHAA 475 E R+ VA HAA Sbjct 416 EVRVTVAFAR-HAA 428 >gi|108801662|ref|YP_641859.1| hypothetical protein Mmcs_4699 [Mycobacterium sp. MCS] gi|119870813|ref|YP_940765.1| hypothetical protein Mkms_4785 [Mycobacterium sp. KMS] gi|108772081|gb|ABG10803.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696902|gb|ABL93975.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=434 Score = 521 bits (1341), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 278/434 (65%), Positives = 328/434 (76%), Gaps = 7/434 (1%) Query 42 AILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADA 101 A+ E +FD VD EA L A++ +LER+KS+AAA QARA A RR EA + Sbjct 8 AMFESVFD------VDPDAGEAELRAQVEQLERLKSSAAAAQARATALWAAKRRATEAAS 61 Query 102 GVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLI 161 G+P R+RGRG+A+EVALAR+D+P G HLG A+ALV+EMPHTLAALE G LSEWRATLI Sbjct 62 GMPKRKRGRGLATEVALARKDAPVCGNTHLGMARALVHEMPHTLAALECGALSEWRATLI 121 Query 162 VRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETE 221 V++SACL VE RR LDAELCAD+S LDG G+ RI A A+ I RLDA AVV R+A+A + Sbjct 122 VKQSACLSVEHRRHLDAELCADVSKLDGWGNRRIEAEAKKITTRLDAAAVVARSAKAAGD 181 Query 222 RTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQP 281 R VTIRPAP TM +VTALLPVA+GV+VYAALKR ADTTFDDR+RGQVMADTLVERVTG+P Sbjct 182 RCVTIRPAPGTMAYVTALLPVAQGVAVYAALKREADTTFDDRSRGQVMADTLVERVTGRP 241 Query 282 AEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLY 341 AE PV++NL L+D TL+ D P +GYGP+PA V R LV DAVAD ++ATLRRLY Sbjct 242 AEKPVPVSLNLALADTTLVGDDDEPGWCEGYGPVPAGVVRALVSDAVADEAAKATLRRLY 301 Query 342 RHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTAT 401 RHP SG LVAMES+AR FPKGLAAFI +RDQ CR PYC+APIRH DHA+PH +GGPT+A Sbjct 302 RHPASGQLVAMESKARTFPKGLAAFIDIRDQTCRTPYCNAPIRHHDHAEPHRQGGPTSAR 361 Query 402 NGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQV 461 NGLG CE CNY KEAPGW V+T +D+ G H AEF TPTG Y TAPPLPGP S + Sbjct 362 NGLGECEGCNYAKEAPGWTVTT-SDDGGEHRAEFRTPTGATYRSTAPPLPGPPVYARSII 420 Query 462 EARIGVALTHLHAA 475 E + + + AA Sbjct 421 EGGLSIDIVRFAAA 434 >gi|118464996|ref|YP_883136.1| hypothetical protein MAV_3980 [Mycobacterium avium 104] gi|118166283|gb|ABK67180.1| conserved hypothetical protein [Mycobacterium avium 104] Length=419 Score = 521 bits (1341), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 315/421 (75%), Positives = 339/421 (81%), Gaps = 5/421 (1%) Query 56 VDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASE 115 VD E++L RI+ELE +K AAAA QARAAAALD RR EA AGVPA RRGRGVASE Sbjct 3 VDPAAGESALIERISELETLKCAAAAAQARAAAALDAARRAAEAAAGVPAARRGRGVASE 62 Query 116 VALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRA 175 VALARRDSPARGGRHLGFAKALV+EMPHTLAALE G LSEWRATLIVRESACLD EDRRA Sbjct 63 VALARRDSPARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRESACLDAEDRRA 122 Query 176 LDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTW 235 LDAELCAD + L GMGDAR+AAAA+AIAYRLD AVVERAA+AE +RTVTIRPAPDTMT+ Sbjct 123 LDAELCADPAGLSGMGDARVAAAAKAIAYRLDPHAVVERAAKAENDRTVTIRPAPDTMTY 182 Query 236 VTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS 295 +TALLPVA+GVSVYAAL+R ADT D R RGQVMADTLVERVTG+ + PVAVNLVLS Sbjct 183 LTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRSTVPTPVAVNLVLS 242 Query 296 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR 355 DETLL G AP + GYGPIPAAVAR +V +A AD RSRATLRRLY HPR+GALVAMESR Sbjct 243 DETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHPRAGALVAMESR 302 Query 356 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE 415 AR FP+GLA FIGLRDQRCR PYCDAPIRHRDHAQP GG T+A NGLG CE CNYVKE Sbjct 303 ARLFPQGLARFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGLGLCEHCNYVKE 362 Query 416 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARIGVALTHLHA 474 GW VS DET HTA FTTPTG Y TAPP P I +S VE R+ VA HA Sbjct 363 TSGWTVSAGVDETHTHTALFTTPTGQTYRSTAPPRAPA---ITMSTVEVRVAVAFAR-HA 418 Query 475 A 475 A Sbjct 419 A 419 >gi|126437648|ref|YP_001073339.1| hypothetical protein Mjls_5084 [Mycobacterium sp. JLS] gi|126237448|gb|ABO00849.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=434 Score = 520 bits (1340), Expect = 2e-145, Method: Compositional matrix adjust. Identities = 278/434 (65%), Positives = 327/434 (76%), Gaps = 7/434 (1%) Query 42 AILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADA 101 A+ E FD VD EA L A++ +LER+KS+AAA QARA A RR EA + Sbjct 8 AMFESAFD------VDPDAGEAELRAQVEQLERLKSSAAAAQARATALWAAKRRATEAAS 61 Query 102 GVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLI 161 G+P R+RGRG+A+EVALAR+D+P G HLG A+ALV+EMPHTLAALE G LSEWRATLI Sbjct 62 GMPKRKRGRGLATEVALARKDAPVCGNTHLGMARALVHEMPHTLAALECGALSEWRATLI 121 Query 162 VRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETE 221 V++SACL VE RR LDAELCAD+S LDG G+ RI A A+ I RLDA AVV R+A+A + Sbjct 122 VKQSACLSVEHRRHLDAELCADVSKLDGWGNRRIEAEAKKITTRLDAAAVVARSAKAAGD 181 Query 222 RTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQP 281 R VTIRPAPDTM +VTALLPVA+GV+VYAALKR ADTTFDDR+RGQVMADTLVERVTG+P Sbjct 182 RCVTIRPAPDTMAYVTALLPVAQGVAVYAALKREADTTFDDRSRGQVMADTLVERVTGRP 241 Query 282 AEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLY 341 AE PV++NL L+D TL+ D P +GYGP+PA V R LV DAVAD ++ATLRRLY Sbjct 242 AEKPVPVSLNLALADTTLVGDDDEPGWCEGYGPVPAGVVRALVGDAVADEAAKATLRRLY 301 Query 342 RHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTAT 401 RHP SG LVAMES+AR FPKGLAAFI +RDQ CR PYC+APIRH DHA+PH +GGPT+A Sbjct 302 RHPASGQLVAMESKARTFPKGLAAFIDIRDQTCRTPYCNAPIRHHDHAEPHRQGGPTSAR 361 Query 402 NGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQV 461 NGLG CE CNY KE PGW V+T +D+ G H AEF TPTG Y TAPPLPGP S + Sbjct 362 NGLGECEGCNYAKETPGWTVTT-SDDGGEHRAEFRTPTGATYRSTAPPLPGPPVYARSII 420 Query 462 EARIGVALTHLHAA 475 E + + + AA Sbjct 421 EGGLSIDIVRFAAA 434 >gi|296169248|ref|ZP_06850901.1| HNH nuclease [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896146|gb|EFG75813.1| HNH nuclease [Mycobacterium parascrofulaceum ATCC BAA-614] Length=358 Score = 512 bits (1319), Expect = 4e-143, Method: Compositional matrix adjust. Identities = 279/361 (78%), Positives = 303/361 (84%), Gaps = 3/361 (0%) Query 115 EVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRR 174 EVALARRDSPARGGRHLGFAKALV EMPHTLAALE G LSEWRATLIVRESACLDVEDRR Sbjct 1 EVALARRDSPARGGRHLGFAKALVCEMPHTLAALERGALSEWRATLIVRESACLDVEDRR 60 Query 175 ALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMT 234 ALDAELCAD ++L GMGDAR+AAAA+AIAYRLD AVVERAARAE ERTVTIRPAPDTMT Sbjct 61 ALDAELCADPASLSGMGDARVAAAAKAIAYRLDPHAVVERAARAEQERTVTIRPAPDTMT 120 Query 235 WVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVL 294 ++TALLPVA+GVSVYAAL+R ADT D R+RGQVMADTLVERVTG+ A P+AVNLVL Sbjct 121 YLTALLPVAQGVSVYAALRREADTRGDGRSRGQVMADTLVERVTGRSAAVPSPIAVNLVL 180 Query 295 SDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMES 354 SD+TLL GD APA + GYGPIPAAVAR +V AVAD RSRATLRRLY HPR+GALVAMES Sbjct 181 SDQTLLGGDHAPADIAGYGPIPAAVARAMVGSAVADRRSRATLRRLYAHPRTGALVAMES 240 Query 355 RARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVK 414 R+R FP+GLAAFIGLRDQRCR PYCDAP+RHRDHAQP GG TTA NGLG CE CNYVK Sbjct 241 RSRIFPRGLAAFIGLRDQRCRTPYCDAPVRHRDHAQPWADGGATTADNGLGLCENCNYVK 300 Query 415 EAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHA 474 E+ GWRV+T DE HTA FTTPTG Y APP I VS++E R+GV+L HA Sbjct 301 ESAGWRVTTTVDENRTHTALFTTPTGKSYRSAAPPRAP--TITVSELEIRVGVSLAR-HA 357 Query 475 A 475 A Sbjct 358 A 358 >gi|254776396|ref|ZP_05217912.1| hypothetical protein MaviaA2_17254 [Mycobacterium avium subsp. avium ATCC 25291] Length=361 Score = 504 bits (1298), Expect = 1e-140, Method: Compositional matrix adjust. Identities = 278/365 (77%), Positives = 299/365 (82%), Gaps = 5/365 (1%) Query 112 VASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVE 171 +ASEVALARRDSPARGGRHLGFAKALV+EMPHTLAALE G LSEWRATLIVRESACLD E Sbjct 1 MASEVALARRDSPARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRESACLDAE 60 Query 172 DRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPD 231 DRRALDAELCAD + L GMGDAR+AAAA+AIAYRLD AVVERAA+AE +RTVTIRPAPD Sbjct 61 DRRALDAELCADPAGLSGMGDARVAAAAKAIAYRLDPHAVVERAAKAENDRTVTIRPAPD 120 Query 232 TMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVN 291 TMT++TALLPVA+GVSVYAAL+R ADT D R RGQVMADTLVERVTG+ A PVAVN Sbjct 121 TMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRATVPTPVAVN 180 Query 292 LVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVA 351 LVLSDETLL G AP + GYGPIPAAVAR +V +A AD RSRATLRRLY HPR+GALVA Sbjct 181 LVLSDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHPRAGALVA 240 Query 352 MESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCN 411 MESRAR FP+GLA FIGLRDQRCR PYCDAPIRHRDHAQP GG T+A NGLG CE CN Sbjct 241 MESRARLFPQGLARFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGLGLCEHCN 300 Query 412 YVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARIGVALT 470 YVKE GW VS DET HTA FTTPTG Y TAPP P I +S+VE R+ VA Sbjct 301 YVKETAGWTVSAGVDETHIHTALFTTPTGQTYRSTAPPRAPA---ITMSKVEVRVAVAFA 357 Query 471 HLHAA 475 HAA Sbjct 358 R-HAA 361 >gi|118469447|ref|YP_890248.1| hypothetical protein MSMEG_6025 [Mycobacterium smegmatis str. MC2 155] gi|118170734|gb|ABK71630.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=438 Score = 496 bits (1277), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 270/431 (63%), Positives = 314/431 (73%), Gaps = 3/431 (0%) Query 46 HMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPA 105 HMF+ SL +D + EA L RI + ER+KSAAAA QA A+ ++ RR EA AG+PA Sbjct 10 HMFE--SLFDIDPQASEAELRDRIEQFERMKSAAAAAQATASVLWEQKRRAAEAAAGIPA 67 Query 106 RRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRES 165 RRGRG+A+EVALARR+SP GGRHLG A ALV E+PHTLAAL G LSEWRATLI RES Sbjct 68 SRRGRGLATEVALARRESPNAGGRHLGLAHALVDELPHTLAALRCGALSEWRATLIARES 127 Query 166 ACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVT 225 ACL E RR LDAEL AD S DG GDAR+AA A+ IA RL+ AV++R+A+AE +R VT Sbjct 128 ACLSPELRRELDAELSADPSRFDGWGDARVAAEAKKIACRLNIDAVLDRSAKAEKDRRVT 187 Query 226 IRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAA 285 IRPAPD MT +T LLP+ +GV+VYAAL +AA DDR RGQVMADTLVERVTG+PA A Sbjct 188 IRPAPDAMTKLTVLLPLKQGVAVYAALHQAAMVNADDRNRGQVMADTLVERVTGRPAHAP 247 Query 286 QPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPR 345 PV +NLV++D TL D P V GYGP+PA VAR +V DA D ++A +RRL+RHP+ Sbjct 248 VPVNLNLVMADTTLFGEDDQPGWVQGYGPVPAEVARRMVADATLDENTKAAVRRLFRHPK 307 Query 346 SGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLG 405 SG LVAMESR+R FPKGLA FIGLRDQ CR PYCDA IRHRDHA PHH GGPTTA NGLG Sbjct 308 SGQLVAMESRSRIFPKGLATFIGLRDQTCRTPYCDALIRHRDHAVPHHDGGPTTAHNGLG 367 Query 406 SCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG-PLEIDVSQVEAR 464 +CE CNY KEAPGW V G H AE+ TPTG Y TAPPLPG P+ +S VE Sbjct 368 TCEACNYAKEAPGWSVIITETSDGEHIAEYVTPTGAVYRSTAPPLPGRPVRHTLSLVETG 427 Query 465 IGVALTHLHAA 475 + + L AA Sbjct 428 LTIDLVTFDAA 438 >gi|120405676|ref|YP_955505.1| hypothetical protein Mvan_4725 [Mycobacterium vanbaalenii PYR-1] gi|119958494|gb|ABM15499.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=426 Score = 493 bits (1268), Expect = 4e-137, Method: Compositional matrix adjust. Identities = 268/433 (62%), Positives = 306/433 (71%), Gaps = 7/433 (1%) Query 43 ILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAG 102 + E MFD VD +A L A + LER+KS AAA QARA A R+ E AG Sbjct 1 MFESMFD------VDETASQAELRAAVERLERLKSQAAAAQARATALWAAKRQLAEESAG 54 Query 103 VPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIV 162 V A RG+G+ASEVALARRD+P +G +HLGFAKALV EMPHTLAALE G LSEWRA LIV Sbjct 55 VRAHHRGKGLASEVALARRDAPVKGNQHLGFAKALVNEMPHTLAALESGVLSEWRANLIV 114 Query 163 RESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETER 222 RESACL VE RR LDAELCAD S L+G G+ RI A A+ IA RLDA A+VERA +A +R Sbjct 115 RESACLSVEHRRQLDAELCADASGLEGWGNRRIEAEAKKIAARLDAAALVERARKAPEQR 174 Query 223 TVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPA 282 V+ RPAPD M +VT LLP+ GV+VYAA RAADTTFD RTR QVMADT+ ERVTG+ A Sbjct 175 CVSCRPAPDNMLYVTVLLPMTHGVAVYAACNRAADTTFDGRTRDQVMADTIYERVTGRSA 234 Query 283 EAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYR 342 VA+NLV++D TL D AP GYGP+PAAV R+LV DAV D +++ATLRRLYR Sbjct 235 AEPVSVALNLVMADTTLFGDDEAPGWAQGYGPVPAAVVRDLVSDAVTDAKAKATLRRLYR 294 Query 343 HPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATN 402 HP+SG LVAMESR+ FPKGLA FIGLRDQ CR PYCDAPIRH DHA P GGPT+A N Sbjct 295 HPKSGQLVAMESRSWLFPKGLATFIGLRDQSCRTPYCDAPIRHHDHAVPDREGGPTSALN 354 Query 403 GLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVE 462 GLG C+ CNY KEAPGW V+T TD G HTA F TPTG Y APP PG S VE Sbjct 355 GLGECQACNYAKEAPGWHVTT-TDTDGEHTATFCTPTGAKYFSIAPPAPGTPVSRRSIVE 413 Query 463 ARIGVALTHLHAA 475 + + + AA Sbjct 414 GELSIDIVTFLAA 426 >gi|254364267|ref|ZP_04980313.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|134149781|gb|EBA41826.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length=240 Score = 487 bits (1253), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 239/240 (99%), Positives = 240/240 (100%), Gaps = 0/240 (0%) Query 236 VTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS 295 +TALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS Sbjct 1 MTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS 60 Query 296 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR 355 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR Sbjct 61 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR 120 Query 356 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE 415 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE Sbjct 121 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE 180 Query 416 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 181 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 240 >gi|289755191|ref|ZP_06514569.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289695778|gb|EFD63207.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=407 Score = 477 bits (1228), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 256/342 (75%), Positives = 282/342 (83%), Gaps = 4/342 (1%) Query 129 RHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCADMSALD 188 RHLGFAKALVYEMPHTLAAL+ G LSEWRATLIVRESACLDV DRRALDAELC D L+ Sbjct 64 RHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDLE 123 Query 189 GMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPVARGVSV 248 GMGDAR+ AAARAIAYRLD QAVV+RAA AE +RTVTIRPAPDTMT++TALLPVA+GVSV Sbjct 124 GMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSV 183 Query 249 YAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAV 308 YAAL RAADT D R+RGQVMADTLVERVTG+ A P+AVNLV+SDETLL PA Sbjct 184 YAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPAQ 243 Query 309 VDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIG 368 + GYGPIPAAVAR +V AV D RSRATLRRLY HP++GALV+MESRAR FP+GLAAFI Sbjct 244 LCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIE 303 Query 369 LRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDET 428 LRDQRCR PYCDAPIRHRDHA P GGPT+A NGLG+CERCNY K+APGWRVST DE Sbjct 304 LRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDEN 363 Query 429 GRHTAEFTTPTGMYYHCTAPP-LPGPLEIDVSQVEARIGVAL 469 HTAEF TPTG + APP LP + VS++E RIG+AL Sbjct 364 HTHTAEFITPTGSRHRSGAPPHLPA---VTVSELEVRIGIAL 402 >gi|254821166|ref|ZP_05226167.1| hypothetical protein MintA_14612 [Mycobacterium intracellulare ATCC 13950] Length=335 Score = 473 bits (1217), Expect = 3e-131, Method: Compositional matrix adjust. Identities = 257/338 (77%), Positives = 282/338 (84%), Gaps = 3/338 (0%) Query 138 VYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCADMSALDGMGDARIAA 197 ++EMPHTLAALE G LSEWRATLIVRESACLDVEDRRALDAE+CAD S+L GMGDAR+AA Sbjct 1 MHEMPHTLAALECGALSEWRATLIVRESACLDVEDRRALDAEMCADPSSLSGMGDARVAA 60 Query 198 AARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAAD 257 AA+AIAYRLD A+VERAA+AE RTVTIRPAPDTM++VTALLPVA+GVSVYA L+R AD Sbjct 61 AAKAIAYRLDPHAIVERAAKAEEGRTVTIRPAPDTMSYVTALLPVAQGVSVYATLRREAD 120 Query 258 TTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPA 317 T D RTRGQVMADTLVERVTG+ A PVAVNL L+DETLL GD APA V GYGPIPA Sbjct 121 TCGDGRTRGQVMADTLVERVTGRSATVPTPVAVNLALTDETLLGGDDAPADVAGYGPIPA 180 Query 318 AVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMP 377 +VAR++V +A AD RSRATLRRLY HP+SGALVAMESRAR FP+GLAAFIGLRDQ CR P Sbjct 181 SVARSMVAEAAADRRSRATLRRLYTHPQSGALVAMESRARLFPQGLAAFIGLRDQHCRTP 240 Query 378 YCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTT 437 YCDAPIRHRDHAQP GGPTTA NGLG CE+CNYVKE GWRVST DE HTA FTT Sbjct 241 YCDAPIRHRDHAQPWADGGPTTAGNGLGLCEQCNYVKENAGWRVSTSVDENHTHTALFTT 300 Query 438 PTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 PTG Y TAPP GP I +S++E R+GVAL HAA Sbjct 301 PTGTTYRSTAPPR-GP-TITMSKLEVRVGVALAR-HAA 335 >gi|315446192|ref|YP_004079071.1| hypothetical protein Mspyr1_46930 [Mycobacterium sp. Spyr1] gi|315264495|gb|ADU01237.1| hypothetical protein Mspyr1_46930 [Mycobacterium sp. Spyr1] Length=430 Score = 471 bits (1212), Expect = 1e-130, Method: Compositional matrix adjust. Identities = 260/424 (62%), Positives = 304/424 (72%), Gaps = 4/424 (0%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MF+ SL +D +A L A + ER+KSAAAA QARA A R E AGVP R Sbjct 1 MFE--SLFDIDEGASQAELRAVVERCERLKSAAAAAQARATALWAAKRAAAEEAAGVPVR 58 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRG+G+ASEVALARRD+P +GG+HLGFAKALV+EMPHT AALE G LSEWRATLIVRESA Sbjct 59 RRGKGLASEVALARRDAPVKGGQHLGFAKALVHEMPHTWAALECGALSEWRATLIVRESA 118 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CL VEDRR LD ELCAD+S L+G G+ R+ A A+ IA RLD AVVERA +A + V+ Sbjct 119 CLSVEDRRRLDEELCADVSTLEGWGNKRVEAEAKKIAARLDVAAVVERADKAAAQARVSC 178 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAP+ M + T LLP+A+G+ +YAALK ADTTFD R+RGQVM DT ER+TG+ A A Sbjct 179 RPAPNGMVYFTVLLPLAQGIGMYAALKHHADTTFDGRSRGQVMTDTAFERITGRSAGTAV 238 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 PVA+NLV++D TL D P +DGYGP+PA R L DAVAD +RATLRRLYRHPRS Sbjct 239 PVALNLVMADTTLAGDDDCPGWLDGYGPVPAGFCRALTGDAVADKGARATLRRLYRHPRS 298 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 G LVAMESRAR FPKGLA I RDQ CR PYCDAPIRH DHA P GG T+A NGLG Sbjct 299 GQLVAMESRARIFPKGLATLIDRRDQTCRTPYCDAPIRHHDHATPDRAGGKTSAENGLGE 358 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG-PLEIDVSQVEARI 465 C CNY KEAPGW+VS T + G HTA + TPTG ++ AP LPG P+ +S E R+ Sbjct 359 CAACNYAKEAPGWQVSAGTQD-GSHTARWVTPTGAVHYSIAPTLPGPPVRRRISDTEGRL 417 Query 466 GVAL 469 + L Sbjct 418 SIDL 421 >gi|145223173|ref|YP_001133851.1| hypothetical protein Mflv_2586 [Mycobacterium gilvum PYR-GCK] gi|145215659|gb|ABP45063.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=430 Score = 467 bits (1201), Expect = 3e-129, Method: Compositional matrix adjust. Identities = 259/424 (62%), Positives = 302/424 (72%), Gaps = 4/424 (0%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MF+ SL +D +A L A + ER+KSAAAA QARA A R E AGVP R Sbjct 1 MFE--SLFDIDEGASQAELRAVVERCERLKSAAAAAQARATALWAAKRAAAEEAAGVPVR 58 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRG+G+ASEVALARRD+P +GG+HLGFAKAL+ EMPHT AALE G LSEWRATLIVRESA Sbjct 59 RRGKGLASEVALARRDAPVKGGQHLGFAKALMGEMPHTWAALECGALSEWRATLIVRESA 118 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CL VEDRR LD ELCAD+S +G G+ R+ A A+ IA RLD AVVER RA + V+ Sbjct 119 CLSVEDRRRLDEELCADVSRFEGWGNKRVEAEAKKIAARLDVAAVVERVDRAAAQARVSC 178 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAP+ M + T LLP+A+G+ +YAALK ADTTFD R+RGQVMADT ER+TG+ A A Sbjct 179 RPAPNGMVYFTVLLPLAQGIGMYAALKHHADTTFDGRSRGQVMADTAFERITGRSAGTAV 238 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 PVA+NLV++D TL D P +DGYGP+PA R L DAVAD +RATLRRLYRHPRS Sbjct 239 PVALNLVMADTTLAGDDDCPGWLDGYGPVPAGFCRALTGDAVADKGARATLRRLYRHPRS 298 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 G LVAMESRAR FPKGLA I RDQ CR PYCDAPIRH DHA P GG T+A NGLG Sbjct 299 GQLVAMESRARLFPKGLATLIDRRDQTCRTPYCDAPIRHHDHATPDRAGGKTSAENGLGE 358 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG-PLEIDVSQVEARI 465 C CNY KEAPGW+VS T + G HTA + TPTG ++ AP LPG P+ +S E R+ Sbjct 359 CAACNYAKEAPGWQVSAGTQD-GSHTARWVTPTGAVHYSIAPALPGPPVRRRISDTEGRL 417 Query 466 GVAL 469 + L Sbjct 418 SIDL 421 >gi|120406245|ref|YP_956074.1| hypothetical protein Mvan_5297 [Mycobacterium vanbaalenii PYR-1] gi|119959063|gb|ABM16068.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=430 Score = 466 bits (1198), Expect = 6e-129, Method: Compositional matrix adjust. Identities = 262/433 (61%), Positives = 302/433 (70%), Gaps = 7/433 (1%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MF+ SL VD EA L A + ER+KS AAA QARA A RR E GVPA Sbjct 1 MFE--SLFDVDVGASEAELRAAVERCERLKSQAAAAQARATALWAAKRRAAEQARGVPAA 58 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 RRG+G+ASEVALAR D+P G RHLGFA ALV EMPHTLAALE G LSEWRATLIVRESA Sbjct 59 RRGKGLASEVALARHDAPVLGNRHLGFATALVEEMPHTLAALECGALSEWRATLIVRESA 118 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CL VE RRALD ELC D+S L G G+ R+ A A+ IA RLDA A+VER+ +A + VT Sbjct 119 CLSVEHRRALDEELCGDVSRLAGWGNKRVEAEAKTIAARLDAAAIVERSEKAAADCAVTC 178 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAP+ M +VT LP+ RGV +YAA KRAADTTFD R RGQVM DT+ ERVTG+PA+ Sbjct 179 RPAPNNMVYVTLRLPLTRGVGIYAACKRAADTTFDGRPRGQVMTDTVYERVTGRPADTPV 238 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLV---RDAVADTRSRATLRRLYRH 343 PVA+NLV++D TL D +DGYGP+PA R L+ DA A+ +ATLRRLYRH Sbjct 239 PVALNLVMADTTLAGDDDELGWLDGYGPVPAGFCRTLIGNADDAEAEAEVKATLRRLYRH 298 Query 344 PRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNG 403 P SG LVAMESRAR FPKGL + RD+ CR PYCDAPIRH DHA P +GGPT+A NG Sbjct 299 PTSGQLVAMESRARIFPKGLGMLLQRRDRTCRTPYCDAPIRHHDHATPDRQGGPTSALNG 358 Query 404 LGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG-PLEIDVSQVE 462 LG CE CNY KEAPGW V+T D G HTA+F TPTG Y TAPPLPG P+ +S +E Sbjct 359 LGECEACNYAKEAPGWTVTTG-DVDGAHTADFETPTGAVYRSTAPPLPGPPVRRRLSLLE 417 Query 463 ARIGVALTHLHAA 475 R+ + L AA Sbjct 418 GRLSIDLVTFDAA 430 >gi|145224332|ref|YP_001135010.1| HNH nuclease [Mycobacterium gilvum PYR-GCK] gi|145216818|gb|ABP46222.1| HNH nuclease [Mycobacterium gilvum PYR-GCK] Length=436 Score = 464 bits (1194), Expect = 1e-128, Method: Compositional matrix adjust. Identities = 254/435 (59%), Positives = 300/435 (69%), Gaps = 7/435 (1%) Query 41 PAILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEAD 100 P + E +FD D+ E L + + E +KS AAA QAR A R E Sbjct 9 PDMFESLFDY------DTEASEKELRVLVEQYEALKSRAAAAQARVTALWAAKRAAAERA 62 Query 101 AGVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATL 160 AG+ R+RG+G+ASE+ALAR D+P +G +HLGFA ALV+EMPHTLAALE G LSE+RATL Sbjct 63 AGIGTRKRGKGLASEIALARHDAPVKGNQHLGFANALVHEMPHTLAALECGVLSEYRATL 122 Query 161 IVRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAET 220 IVRESACL E RR LD ELC+D S L G G+ R+ A A+ I RLDA AVVER+A+AE Sbjct 123 IVRESACLSAEHRRRLDEELCSDPSKLAGWGNNRVEAEAKRITARLDAAAVVERSAKAEQ 182 Query 221 ERTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQ 280 +R VT RPAP+ M +VT LLPVA+GV +YAALKRAADTTFD+R+RGQVMADT R+TG+ Sbjct 183 DRCVTTRPAPNCMVYVTVLLPVAQGVGMYAALKRAADTTFDERSRGQVMADTAYARITGK 242 Query 281 PAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRL 340 A V++NLV++D TL D PA +DGYGP+PA A L DAVAD +ATLRRL Sbjct 243 VATQPVSVSLNLVMADTTLAGDDTEPAWLDGYGPVPAGFACKLTGDAVADEDVKATLRRL 302 Query 341 YRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTA 400 YRHP SG LVAMESR+R FPKGLAAFIG+RD+ CR PYC+APIRH DHA P GG T+A Sbjct 303 YRHPGSGQLVAMESRSRAFPKGLAAFIGIRDRTCRTPYCNAPIRHHDHATPDRDGGRTSA 362 Query 401 TNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQ 460 NGLG CE CNY KEAPGW V+T G H AEF TPT Y+ APPLPG S Sbjct 363 VNGLGLCEACNYAKEAPGWTVTTSV-RAGEHRAEFVTPTHATYYSIAPPLPGTRISRRSI 421 Query 461 VEARIGVALTHLHAA 475 VE R + L AA Sbjct 422 VEDRFSIDLVTFEAA 436 >gi|315444664|ref|YP_004077543.1| hypothetical protein Mspyr1_30910 [Mycobacterium sp. Spyr1] gi|315262967|gb|ADT99708.1| hypothetical protein Mspyr1_30910 [Mycobacterium sp. Spyr1] Length=426 Score = 462 bits (1189), Expect = 5e-128, Method: Compositional matrix adjust. Identities = 254/429 (60%), Positives = 299/429 (70%), Gaps = 3/429 (0%) Query 47 MFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPAR 106 MF+ SL D+ E L + + E +KS AAA QAR A R E AG+ R Sbjct 1 MFE--SLFDYDTEASEKELRVLVEQYEALKSRAAAAQARVTALWAAKRAAAERAAGIGTR 58 Query 107 RRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESA 166 +RG+G+ASE+ALAR D+P +G +HLGFA ALV+EMPHTLAALE G LSE+RATLIVRESA Sbjct 59 KRGKGLASEIALARHDAPVKGNQHLGFANALVHEMPHTLAALECGVLSEYRATLIVRESA 118 Query 167 CLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTI 226 CL E RR LD ELC+D S L G G+ R+ A A+ I RLDA AVVER+A+AE +R VT Sbjct 119 CLSTEHRRRLDEELCSDPSKLAGWGNNRVEAEAKRITARLDAAAVVERSAKAEQDRCVTT 178 Query 227 RPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQ 286 RPAP+ M +VT LLPVA+GV +YAALKRAADTTFD+R+RGQVMADT R+TG+ A Sbjct 179 RPAPNCMVYVTVLLPVAQGVGMYAALKRAADTTFDERSRGQVMADTAYARITGKVATQPV 238 Query 287 PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRS 346 V++NLV++D TL D PA +DGYGP+PA A L DAVAD +ATLRRLYRHP S Sbjct 239 SVSLNLVMADTTLAGDDTEPAWLDGYGPVPAGFACKLTGDAVADEDVKATLRRLYRHPGS 298 Query 347 GALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGS 406 G LVAMESR+R FPKGLAAFIG+RD+ CR PYC+APIRH DHA P GG T+A NGLG Sbjct 299 GQLVAMESRSRAFPKGLAAFIGIRDRTCRTPYCNAPIRHHDHATPDRDGGRTSAVNGLGL 358 Query 407 CERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIG 466 CE CNY KEAPGW V+T G H AEF TPT Y+ APPLPG S VE R Sbjct 359 CEACNYAKEAPGWTVTTSV-RAGEHRAEFVTPTHATYYSIAPPLPGTRISRRSIVEDRFS 417 Query 467 VALTHLHAA 475 + L AA Sbjct 418 IDLVTFEAA 426 >gi|120404582|ref|YP_954411.1| hypothetical protein Mvan_3614 [Mycobacterium vanbaalenii PYR-1] gi|119957400|gb|ABM14405.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=466 Score = 454 bits (1168), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 260/446 (59%), Positives = 302/446 (68%), Gaps = 20/446 (4%) Query 43 ILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAG 102 + E +FD+ GV + EA L A + ER+KS AAA QARA A RR E G Sbjct 28 MFESLFDV----GVGA--SEAELRAAVERCERLKSQAAAAQARATALWAAKRRAAEQAGG 81 Query 103 VPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIV 162 VPA +RG+G+ASEVALAR D+P G RHLGFA+ALV EMPHTLAALE G LSEWRATLIV Sbjct 82 VPAAKRGKGLASEVALARHDAPVLGNRHLGFAQALVEEMPHTLAALECGALSEWRATLIV 141 Query 163 RESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETER 222 RESACL VE RRALD ELC D+S L G G+ RI A A+ IA RLDA AVV+ +A + Sbjct 142 RESACLSVEHRRALDEELCGDVSRLAGWGNKRIEAEAKTIAARLDAAAVVDHTEKAAADC 201 Query 223 TVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPA 282 VT RPAP+ M +VT LP+ RGV +YAA KRAADTTFD R RGQVM DT+ ERVTG+PA Sbjct 202 AVTCRPAPNNMVYVTLRLPLTRGVGIYAACKRAADTTFDGRPRGQVMTDTVYERVTGRPA 261 Query 283 EAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAV------------AD 330 + PVA+NLV++D TL D +DGYGP+PA R L+ +AV D Sbjct 262 DTPVPVALNLVMADTTLAGDDDELGWLDGYGPVPAGFCRALIGNAVADAHAHADADAEVD 321 Query 331 TRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQ 390 +ATLRRLYRHP SG LVAMESRAR FPKGL + RD+ CR PYCDAPIRH DHA Sbjct 322 AEVKATLRRLYRHPTSGQLVAMESRARIFPKGLGMLLQRRDRTCRTPYCDAPIRHHDHAT 381 Query 391 PHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPL 450 P GGPT+A NGLG CE CNY KEAPGW V+T D G HTA+F TPTG Y TAPPL Sbjct 382 PDRAGGPTSALNGLGECEACNYAKEAPGWTVTTG-DVDGAHTADFETPTGAVYRSTAPPL 440 Query 451 PG-PLEIDVSQVEARIGVALTHLHAA 475 PG P+ +S +E R+ + L AA Sbjct 441 PGPPVRRRLSLLEGRLSIDLVTFDAA 466 >gi|169628995|ref|YP_001702644.1| hypothetical protein MAB_1907 [Mycobacterium abscessus ATCC 19977] gi|169240962|emb|CAM61990.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=398 Score = 447 bits (1149), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 252/390 (65%), Positives = 294/390 (76%), Gaps = 3/390 (0%) Query 63 ASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALARRD 122 A L RIAELERVK+AAAA QA AA LD+ RR EA GVP RR+G GVA+E+ALAR+D Sbjct 11 AQLVDRIAELERVKAAAAAEQAHAAVLLDRARREEEAANGVPRRRQGAGVATEIALARQD 70 Query 123 SPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCA 182 SPARG RHLGFAKALV EMPHTLAALE G LSEWRAT++VRE+A L VEDR+ +D E+CA Sbjct 71 SPARGSRHLGFAKALVNEMPHTLAALECGALSEWRATILVRETAYLAVEDRQKIDVEMCA 130 Query 183 DMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPV 242 + S L G+GD R+AA A+ +AYRLDAQAVV RA RAE+ER V++RPAPDTMT++TALLPV Sbjct 131 ETSRLRGLGDTRLAAEAKRLAYRLDAQAVVRRARRAESERRVSLRPAPDTMTYLTALLPV 190 Query 243 ARGVSVYAALKRAADTTFDD-RTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLA 301 +GV+VYAALKR AD + D R +GQ+MADTLVERVTG A AA PV VN+ +SDE LL Sbjct 191 KQGVAVYAALKRTADASMDPVRGQGQIMADTLVERVTGVSAAAAVPVGVNITVSDEALLG 250 Query 302 GDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPK 361 G PA + G+G +PAAVAR L+ +AV+ ++ +RRLYR +GALV ESR+R FP+ Sbjct 251 GGDEPATITGHGLVPAAVARRLISEAVS-AEAKVLVRRLYRRCTTGALVKAESRSRLFPR 309 Query 362 GLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRV 421 GLA I LRDQ CR PYCDAPIRH DH RGGPT NG G CERCNYVKE GW V Sbjct 310 GLAELIDLRDQTCRTPYCDAPIRHHDHVVGSMRGGPTALDNGQGLCERCNYVKETAGWNV 369 Query 422 STDTDETGRHTAEFTTPTGMYYHCTAPPLP 451 + RHT EFTTPTG Y TAPPLP Sbjct 370 AP-VPGADRHTVEFTTPTGTAYRSTAPPLP 398 >gi|145223484|ref|YP_001134162.1| HNH nuclease [Mycobacterium gilvum PYR-GCK] gi|145215970|gb|ABP45374.1| HNH nuclease [Mycobacterium gilvum PYR-GCK] Length=426 Score = 441 bits (1135), Expect = 1e-121, Method: Compositional matrix adjust. Identities = 245/415 (60%), Positives = 289/415 (70%), Gaps = 2/415 (0%) Query 56 VDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASE 115 VD +A L A + E ER+KS AAA QARA R E AGVPA RRG+G+ASE Sbjct 4 VDEGASQAELRAVVEECERLKSRAAAAQARATVLWAAQRAAAERAAGVPASRRGKGLASE 63 Query 116 VALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRA 175 VALARR++P +G +HLGFAKAL+ EMPHTLAALE G LSEWRATLIVRESACL VE RR Sbjct 64 VALARREAPVKGNQHLGFAKALMQEMPHTLAALEGGVLSEWRATLIVRESACLSVEHRRQ 123 Query 176 LDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTW 235 LDAELC D S + G G+ R+ A A+ IA RLD AVVER RA +R V+ RPAP M + Sbjct 124 LDAELCGDPSRVAGWGNKRVEAEAKRIAARLDVAAVVERNDRAVKDRCVSTRPAPHNMVY 183 Query 236 VTALLPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLS 295 VT L+P+A+G+ +YAAL+R + T D R+ GQVM DT ER+TG+ A A PV +NLV++ Sbjct 184 VTLLMPLAQGIGMYAALRRHGEMTVDGRSLGQVMTDTAFERITGRSAAAPVPVELNLVMA 243 Query 296 DETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESR 355 D TL D P +DGYGP+PA R LV DAVAD +A LRRLYRHPRSG LVAMES Sbjct 244 DTTLAGDDDCPGWLDGYGPVPAGFCRGLVGDAVADAEPKAALRRLYRHPRSGQLVAMESS 303 Query 356 ARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKE 415 AR FPKGLA I RDQ CR PYCDAPIRH DHA P GG T+A NGLG+C CNY KE Sbjct 304 ARVFPKGLATLIDRRDQTCRTPYCDAPIRHHDHAVPDRAGGQTSADNGLGACAGCNYAKE 363 Query 416 APGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG-PLEIDVSQVEARIGVAL 469 APGW+V T E G HTA + TPTG ++ AP LPG P+ +S E+R+ + L Sbjct 364 APGWKV-TAGGEDGVHTARWVTPTGAVHYSIAPTLPGPPVYRRISSTESRLSIDL 417 >gi|240168682|ref|ZP_04747341.1| hypothetical protein MkanA1_05175 [Mycobacterium kansasii ATCC 12478] Length=333 Score = 436 bits (1120), Expect = 6e-120, Method: Compositional matrix adjust. Identities = 251/336 (75%), Positives = 270/336 (81%), Gaps = 4/336 (1%) Query 140 EMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCADMSALDGMGDARIAAAA 199 EMPHTLAALE G LSEWRATLIVRESACLDV DRR LDAELC D + LDG+GDAR+AAAA Sbjct 2 EMPHTLAALERGALSEWRATLIVRESACLDVADRRTLDAELCGDPANLDGLGDARVAAAA 61 Query 200 RAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPVARGVSVYAALKRAADTT 259 +AIA RLD AV +RAA A ER VTIRPAPDTM++VTALLPVA+GVSVYAAL R AD Sbjct 62 KAIACRLDPHAVADRAATAAEERRVTIRPAPDTMSYVTALLPVAQGVSVYAALCREADAC 121 Query 260 FDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAV 319 D R RGQVMADTLVERVTG+ A P+AVNLVLSDETLL D APA V GYGPIPAAV Sbjct 122 RDGRPRGQVMADTLVERVTGRAATVPAPIAVNLVLSDETLLGADSAPADVCGYGPIPAAV 181 Query 320 ARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYC 379 AR +V D VAD RSRATLRRLY HPRSGALVAMESR+R FP+GLAAFI LRDQRCR PYC Sbjct 182 ARAMVADTVADPRSRATLRRLYAHPRSGALVAMESRSRLFPRGLAAFIELRDQRCRTPYC 241 Query 380 DAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPT 439 DAPIRHRDHA+P GG TTA NGLGSCERCNY K+APGW+V+T+ DE HTAEFTTPT Sbjct 242 DAPIRHRDHARPWAEGGATTANNGLGSCERCNYAKQAPGWQVTTN-DENHTHTAEFTTPT 300 Query 440 GMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA 475 G Y APP P I VS VE RIG+AL HAA Sbjct 301 GKRYRSGAPPRIPP--ITVSDVEVRIGIALAR-HAA 333 >gi|339294355|gb|AEJ46466.1| hypothetical protein CCDC5079_1276 [Mycobacterium tuberculosis CCDC5079] Length=207 Score = 425 bits (1093), Expect = 8e-117, Method: Compositional matrix adjust. Identities = 207/207 (100%), Positives = 207/207 (100%), Gaps = 0/207 (0%) Query 269 MADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAV 328 MADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAV Sbjct 1 MADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAV 60 Query 329 ADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDH 388 ADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDH Sbjct 61 ADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDH 120 Query 389 AQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAP 448 AQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAP Sbjct 121 AQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAP 180 Query 449 PLPGPLEIDVSQVEARIGVALTHLHAA 475 PLPGPLEIDVSQVEARIGVALTHLHAA Sbjct 181 PLPGPLEIDVSQVEARIGVALTHLHAA 207 >gi|226361477|ref|YP_002779255.1| hypothetical protein ROP_20630 [Rhodococcus opacus B4] gi|226239962|dbj|BAH50310.1| hypothetical protein [Rhodococcus opacus B4] Length=447 Score = 397 bits (1020), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 235/438 (54%), Positives = 281/438 (65%), Gaps = 12/438 (2%) Query 50 LVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRG 109 L L +D D+A+ + LE VK+A A QAR A LD R + AD VP +RG Sbjct 10 LAELPKLDRDIDDATRIDVLRALEEVKAACAGVQARVTADLDASIRASRADRDVPVSQRG 69 Query 110 RGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLD 169 RG+A++VALARRDSP RGGRHLG A AL +EMPHTLA LE G LSEWRAT++VRE+ACL Sbjct 70 RGIANQVALARRDSPFRGGRHLGMATALAHEMPHTLALLERGLLSEWRATILVRETACLT 129 Query 170 VEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPA 229 EDR ALD LC D + LDG+GD + A RA A +DA+AVV RA +A ++R VT RPA Sbjct 130 REDRTALDYLLCGDPATLDGLGDQAVCAKVRAAAAEVDAEAVVRRARKAVSDRRVTSRPA 189 Query 230 PDTMTWVTALLPVARGVSVYAALKRAADTTF---DDRTRGQVMADTLVERVTGQPAEAAQ 286 PDTM +V+ALLPVA GV+V+A L R AD+ DDRTR Q+MAD LV RVTG A Sbjct 190 PDTMAYVSALLPVAEGVAVHATLARDADSILAAGDDRTRSQIMADLLVSRVTGTHHTATT 249 Query 287 -PVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVAD-------TRSRATLR 338 P+ VNLV+SD LL G PA V GYGP+PA +AR+ + +AV D +R LR Sbjct 250 PPITVNLVISDRALLDGGSEPAHVQGYGPVPADLARHWIAEAVQDAIDPNTGNATRVNLR 309 Query 339 RLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPT 398 RLY +P SGAL A ES+AR FP GLA I LRD+ CR P+CDAPIRH DH Q GGPT Sbjct 310 RLYANPASGALTATESQARCFPAGLARLIDLRDRTCRTPWCDAPIRHHDHIQSREFGGPT 369 Query 399 TATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDV 458 TA NG G C CNY K+ GW + G H E TPTG Y TAPPLP PL Sbjct 370 TAHNGAGLCAACNYAKQGAGWNATPRQRSGGLHHIEIYTPTGHRYRSTAPPLPKPLPFHE 429 Query 459 SQVEARIG-VALTHLHAA 475 Q ++ + + L L AA Sbjct 430 VQTDSPVERILLEFLQAA 447 >gi|119963190|ref|YP_946206.1| hypothetical protein AAur_0393 [Arthrobacter aurescens TC1] gi|119950049|gb|ABM08960.1| conserved hypothetical protein [Arthrobacter aurescens TC1] Length=481 Score = 393 bits (1009), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 220/409 (54%), Positives = 273/409 (67%), Gaps = 20/409 (4%) Query 61 DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR 120 D ++L + +LE +KSA +A QAR A A D +R +A AGVPA RG GVA++VALAR Sbjct 68 DSSALIDELRDLEDLKSAISARQARVAVAFDLAQRAEQAQAGVPAAERGMGVAAQVALAR 127 Query 121 RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL 180 R+SP +G R GFAKALV EMP T+AALE G+L+EWRATL+V+E+ACL VEDR A+D EL Sbjct 128 RESPNKGSRLFGFAKALVTEMPRTMAALESGQLNEWRATLLVKETACLSVEDRAAVDEEL 187 Query 181 CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL 240 D DG GD I AAA+A AYR D ++V +RA+RA TERTV++RPAPDTMT++TALL Sbjct 188 APDAGTFDGTGDKAIIAAAKAAAYRRDPRSVAQRASRAATERTVSLRPAPDTMTYLTALL 247 Query 241 PVARGVSVYAALKRAAD---TTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDE 297 PVA+GV+VYAAL R AD ++ D RTRGQVMADTL ERVTG + A + +NLV++D Sbjct 248 PVAQGVAVYAALTRTADSVRSSGDARTRGQVMADTLTERVTGTSSGVAG-INLNLVMTDR 306 Query 298 TLLAGDRAPAVVDGYGPIPAAVARNLVRDAVAD--------------TRSRATLRRLYRH 343 TL GD PA ++GYG +PA AR L+ + + + R LRRLY Sbjct 307 TLFQGDPEPARLEGYGIVPAEWARALLVEEQSGYEDQLHWNLESADRSELRVLLRRLYTA 366 Query 344 PRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNG 403 PRSG L+ M+S+AR FP+ L FI +RD CR PYCDAPIRH DH P H G T NG Sbjct 367 PRSGELLTMDSKARFFPQKLRRFIHIRDNTCRTPYCDAPIRHIDHVIPWHSEGSTHLNNG 426 Query 404 LGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG 452 G C CN+ KE PGW + + HT +TPTG Y APPLPG Sbjct 427 AGLCGACNHTKENPGWTAKSMPGDV--HTIRVSTPTGHSYKSKAPPLPG 473 >gi|111019339|ref|YP_702311.1| hypothetical protein RHA1_ro02347 [Rhodococcus jostii RHA1] gi|110818869|gb|ABG94153.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=573 Score = 387 bits (993), Expect = 3e-105, Method: Compositional matrix adjust. Identities = 239/440 (55%), Positives = 285/440 (65%), Gaps = 16/440 (3%) Query 50 LVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRG 109 L L +D D+A+ + LE VK+A A QAR A LD R AD VP RG Sbjct 136 LAELPKLDLDIDDATRIDVLRTLEEVKAACAGVQARVTADLDASIRTARADRQVPVAHRG 195 Query 110 RGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLD 169 RG+A++VALARRDSP RGGRHLG A ALV+EMP TLA LE G LSEWRAT++VRE+ACL Sbjct 196 RGIANQVALARRDSPFRGGRHLGMATALVHEMPRTLALLERGVLSEWRATILVRETACLT 255 Query 170 VEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPA 229 EDR ALD LCAD + LDG+GD + A RA A +DA+A+V RA +A ++R VT RPA Sbjct 256 REDRTALDYLLCADPATLDGLGDQAVCAKVRAAAAEVDAEAMVRRARKAVSDRRVTSRPA 315 Query 230 PDTMTWVTALLPVARGVSVYAALKRAADTTF---DDRTRGQVMADTLVERVTGQPAEA-A 285 PDTM +V+ALLPVA+GV+V+A L R AD+ D+RTR Q+MAD LV RVTG P A A Sbjct 316 PDTMAYVSALLPVAQGVAVHATLTRDADSILAAGDERTRSQIMADLLVSRVTGAPHTATA 375 Query 286 QPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADT-------RSRATLR 338 P+ VNLV+SD LL PA V GYGP+PAA+A + + +AV T +R TLR Sbjct 376 PPITVNLVISDRALLDRGSEPAYVQGYGPVPAALAGHWIHEAVQATIDPETGNEARVTLR 435 Query 339 RLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPT 398 RLY +P SGAL A ES+ARRFP GLA I LRD+ CR P+CDAPIRH DH QP GPT Sbjct 436 RLYANPHSGALTATESQARRFPAGLARMIDLRDRTCRTPWCDAPIRHHDHIQPREYEGPT 495 Query 399 TATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPL---E 455 TA NG G C CNY K+ GW G H E TPTG Y T PPLP PL E Sbjct 496 TAHNGAGLCAACNYAKQGAGWNARPHQLPGGLHKIEICTPTGHRYRSTEPPLPKPLPLRE 555 Query 456 IDVSQVEARIGVALTHLHAA 475 + +S RI + +LHAA Sbjct 556 VQISSPVERI--LIEYLHAA 573 >gi|298526546|ref|ZP_07013955.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298496340|gb|EFI31634.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=296 Score = 382 bits (982), Expect = 6e-104, Method: Compositional matrix adjust. Identities = 198/276 (72%), Positives = 223/276 (81%), Gaps = 4/276 (1%) Query 195 IAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPVARGVSVYAALKR 254 + AAARAIA+RLD QAVV+RAA AE +RTVTIRPAPDTMT++TALLPVA+GVSVYAAL R Sbjct 19 VVAAARAIAHRLDPQAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTR 78 Query 255 AADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGP 314 AADT D R+RGQVMADTLVERVTG+ A P+AVNLV+SDETLL PA + GYGP Sbjct 79 AADTRCDGRSRGQVMADTLVERVTGRDAAVPTPIAVNLVMSDETLLGAANTPAQLCGYGP 138 Query 315 IPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRC 374 IPAAVAR +V AV D RSRATLRRLY HP++GALV+MESRAR FP+GLAAFI LRDQRC Sbjct 139 IPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIELRDQRC 198 Query 375 RMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAE 434 R PYCDAPIRHRDHA P GGPT+A NGLG+CERCNY K+APGWRVST DE HTAE Sbjct 199 RTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAE 258 Query 435 FTTPTGMYYHCTAPP-LPGPLEIDVSQVEARIGVAL 469 F TPTG + APP LP + VS++E RIG+AL Sbjct 259 FITPTGSRHRSGAPPHLPA---VTVSELEVRIGIAL 291 >gi|111023031|ref|YP_706003.1| hypothetical protein RHA1_ro06068 [Rhodococcus jostii RHA1] gi|110822561|gb|ABG97845.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=429 Score = 382 bits (981), Expect = 7e-104, Method: Compositional matrix adjust. Identities = 204/390 (53%), Positives = 256/390 (66%), Gaps = 6/390 (1%) Query 72 LERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHL 131 +E +KS A QA + R + G+P RG+AS++ALARR+SP RGGRHL Sbjct 38 IEALKSVGCAVQAVITDDVATQIRADRRARGLPRVEWDRGIASQIALARRESPNRGGRHL 97 Query 132 GFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCADMSALDGMG 191 GFA+ALV+EMPHTLA L GRL+EWRATL+VRE+ACL DR +D LC+D + LDG+G Sbjct 98 GFARALVHEMPHTLAMLRSGRLNEWRATLLVRETACLSAADRGIVDRRLCSDPATLDGVG 157 Query 192 DARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPVARGVSVYAA 251 D R+ A A+A+A LDA AVV R +A +ER VT RPAPD+M +++ L+PV + V + A Sbjct 158 DRRLIARAKALAVELDAAAVVARHRKAVSERRVTSRPAPDSMAYLSVLMPVEQAVCLQAT 217 Query 252 LKRAADTTF-----DDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAP 306 L R AD+ RTR Q+M D L +R TGQ + PVAVNLVLSDETLLAG Sbjct 218 LGRDADSLIATGNSGGRTRNQLMVDLLFDRGTGQAVASGVPVAVNLVLSDETLLAGGHEA 277 Query 307 AVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAF 366 A + G+GP+PA +AR LV DAV D+ + +LRR+Y P+SG L AMES++R FPK LA Sbjct 278 AQLQGFGPVPAGIARQLVADAV-DSDTETSLRRVYACPQSGVLTAMESQSRTFPKSLATL 336 Query 367 IGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTD 426 I LRD+ CR P+CDAPIRH DH + H G TTA NG G CE CNY KE GW + Sbjct 337 IDLRDRTCRTPWCDAPIRHHDHIRSHRESGATTADNGTGLCEACNYAKEGDGWSARPVRN 396 Query 427 ETGRHTAEFTTPTGMYYHCTAPPLPGPLEI 456 G H + TPTG +Y TAPPLP P + Sbjct 397 PGGTHLIDLGTPTGHHYRSTAPPLPTPAHL 426 >gi|119962228|ref|YP_946315.1| HNH endonuclease domain-containing protein [Arthrobacter aurescens TC1] gi|119949087|gb|ABM07998.1| putative HNH endonuclease domain protein [Arthrobacter aurescens TC1] Length=398 Score = 379 bits (973), Expect = 6e-103, Method: Compositional matrix adjust. Identities = 215/395 (55%), Positives = 261/395 (67%), Gaps = 20/395 (5%) Query 75 VKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHLGFA 134 +KSA A QAR A A D +R +A+AGVPA RGRGV ++VALARR+SP RGGR LG A Sbjct 1 MKSAITALQARVAVAFDLAQRAEQAEAGVPASERGRGVGAQVALARRESPNRGGRLLGLA 60 Query 135 KALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCADMSALDGMGDAR 194 KALV EMP TLAAL+ G L+EWRATL+V+E+ACL EDR A+D EL D DG GD Sbjct 61 KALVTEMPRTLAALQSGYLNEWRATLLVKETACLSAEDRCAVDEELAPDAGTFDGKGDKA 120 Query 195 IAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLPVARGVSVYAALKR 254 I AAA+A AYR D ++VV RA+RA ERTV++RPAPDTM+++TALLPVA+GV+VY AL + Sbjct 121 IIAAAKAAAYRRDPRSVVGRASRAAAERTVSLRPAPDTMSYLTALLPVAQGVAVYKALTQ 180 Query 255 AADT--------TFDD-------RTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETL 299 AAD+ +F+D R RGQ+MADTLVER+TG P + ++LV++D TL Sbjct 181 AADSARSSGKAKSFEDVGSGRVVRPRGQIMADTLVERITGTPG-GISGITIDLVMTDRTL 239 Query 300 LAGDRAPAVVDGYGPIPAAVARNLV--RDAVADTRSRATLRRLYRHPRSGALVAMESRAR 357 GD PA + GYG +PA AR +V + D LRRLY P +G L+A +S+AR Sbjct 240 FQGDSEPARLQGYGVVPAEWARTVVGEEQSARDREFSVWLRRLYTAPATGDLLATDSKAR 299 Query 358 RFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAP 417 F L FI RD CR PYCDAPIRH DH P H GG T NG G CE CN+ KE P Sbjct 300 LFSGRLRRFIETRDDSCRTPYCDAPIRHIDHVIPWHSGGQTNLGNGAGLCEACNHTKENP 359 Query 418 GWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPG 452 GW ST + HT E +TPTG Y APPLPG Sbjct 360 GW--STRAVDADVHTLEISTPTGHTYQSKAPPLPG 392 Lambda K H 0.321 0.133 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1009956255448 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40