BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1382 Length=165 Score E Sequences producing significant alignments: (Bits) Value gi|15608522|ref|NP_215898.1| export or membrane protein [Mycobac... 327 4e-88 gi|183982210|ref|YP_001850501.1| secreted protein [Mycobacterium... 231 2e-59 gi|240170758|ref|ZP_04749417.1| hypothetical protein MkanA1_1570... 228 2e-58 gi|118617398|ref|YP_905730.1| secreted protein [Mycobacterium ul... 225 2e-57 gi|342858665|ref|ZP_08715320.1| hypothetical protein MCOL_07306 ... 223 6e-57 gi|41407215|ref|NP_960051.1| hypothetical protein MAP1117 [Mycob... 222 1e-56 gi|296170751|ref|ZP_06852323.1| integral membrane protein [Mycob... 222 1e-56 gi|254818274|ref|ZP_05223275.1| putative export or membrane prot... 222 1e-56 gi|118465714|ref|YP_882573.1| hypothetical protein MAV_3391 [Myc... 222 2e-56 gi|108799332|ref|YP_639529.1| hypothetical protein Mmcs_2365 [My... 212 1e-53 gi|126434990|ref|YP_001070681.1| hypothetical protein Mjls_2406 ... 211 4e-53 gi|120403646|ref|YP_953475.1| putative export or membrane protei... 208 2e-52 gi|145224327|ref|YP_001135005.1| hypothetical protein Mflv_3745 ... 207 3e-52 gi|333990953|ref|YP_004523567.1| hypothetical protein JDM601_231... 206 1e-51 gi|118470888|ref|YP_887361.1| integral membrane protein [Mycobac... 180 6e-44 gi|169629913|ref|YP_001703562.1| hypothetical protein MAB_2829c ... 167 3e-40 gi|226366340|ref|YP_002784123.1| hypothetical protein ROP_69310 ... 157 6e-37 gi|111024100|ref|YP_707072.1| hypothetical protein RHA1_ro07150 ... 155 1e-36 gi|54025591|ref|YP_119833.1| hypothetical protein nfa36210 [Noca... 152 1e-35 gi|312139567|ref|YP_004006903.1| membrane protein [Rhodococcus e... 151 3e-35 gi|226306489|ref|YP_002766449.1| hypothetical protein RER_30020 ... 149 2e-34 gi|229493437|ref|ZP_04387222.1| integral membrane protein [Rhodo... 149 2e-34 gi|326382158|ref|ZP_08203850.1| hypothetical protein SCNU_04401 ... 148 2e-34 gi|262202266|ref|YP_003273474.1| hypothetical protein Gbro_2338 ... 147 4e-34 gi|333919524|ref|YP_004493105.1| hypothetical protein AS9A_1856 ... 140 8e-32 gi|343924550|ref|ZP_08764098.1| hypothetical protein GOALK_017_0... 133 9e-30 gi|296140282|ref|YP_003647525.1| hypothetical protein Tpau_2583 ... 124 4e-27 gi|256379250|ref|YP_003102910.1| hypothetical protein Amir_5243 ... 120 6e-26 gi|134098652|ref|YP_001104313.1| integral membrane protein [Sacc... 110 7e-23 gi|255327151|ref|ZP_05368226.1| integral membrane protein [Rothi... 104 5e-21 gi|257055587|ref|YP_003133419.1| hypothetical protein Svir_15570... 99.4 2e-19 gi|116670811|ref|YP_831744.1| hypothetical protein Arth_2264 [Ar... 98.2 3e-19 gi|296394710|ref|YP_003659594.1| hypothetical protein Srot_2314 ... 97.8 5e-19 gi|328881133|emb|CCA54372.1| putative integral membrane protein ... 97.8 5e-19 gi|300784654|ref|YP_003764945.1| integral membrane protein [Amyc... 96.7 1e-18 gi|302525867|ref|ZP_07278209.1| hypothetical protein SSMG_02249 ... 95.9 2e-18 gi|319950543|ref|ZP_08024453.1| integral membrane protein [Dietz... 95.5 2e-18 gi|119963180|ref|YP_948007.1| hypothetical protein AAur_2267 [Ar... 95.1 3e-18 gi|220912755|ref|YP_002488064.1| hypothetical protein Achl_2001 ... 94.4 5e-18 gi|258654398|ref|YP_003203554.1| hypothetical protein Namu_4277 ... 93.6 9e-18 gi|317505980|ref|ZP_07963812.1| glucan endo-1,3-beta-glucosidase... 92.8 2e-17 gi|325963377|ref|YP_004241283.1| hypothetical protein Asphe3_199... 91.3 4e-17 gi|284032245|ref|YP_003382176.1| hypothetical protein Kfla_4343 ... 91.3 4e-17 gi|302550126|ref|ZP_07302468.1| integral membrane protein [Strep... 90.1 1e-16 gi|295839947|ref|ZP_06826880.1| integral membrane protein [Strep... 89.7 1e-16 gi|345010688|ref|YP_004813042.1| integral membrane protein [Stre... 89.7 1e-16 gi|318057068|ref|ZP_07975791.1| integral membrane protein [Strep... 89.4 2e-16 gi|311113660|ref|YP_003984882.1| hypothetical protein HMPREF0733... 89.0 2e-16 gi|297155771|gb|ADI05483.1| integral membrane protein [Streptomy... 88.6 3e-16 gi|290961853|ref|YP_003493035.1| protein [Streptomyces scabiei 8... 88.6 3e-16 >gi|15608522|ref|NP_215898.1| export or membrane protein [Mycobacterium tuberculosis H37Rv] gi|15840840|ref|NP_335877.1| hypothetical protein MT1426 [Mycobacterium tuberculosis CDC1551] gi|31792576|ref|NP_855069.1| export or membrane protein [Mycobacterium bovis AF2122/97] 80 more sequence titles Length=165 Score = 327 bits (837), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 165/165 (100%), Positives = 165/165 (100%), Gaps = 0/165 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR Sbjct 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 Query 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER Sbjct 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 Query 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEEPV 165 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEEPV Sbjct 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEEPV 165 >gi|183982210|ref|YP_001850501.1| secreted protein [Mycobacterium marinum M] gi|183175536|gb|ACC40646.1| secreted protein [Mycobacterium marinum M] Length=173 Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 114/161 (71%), Positives = 133/161 (83%), Gaps = 0/161 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 MNSGTL GSLIFAAVL +LIA++ LM+RGWRRR+ Q+EL+G LPD+P V A+V T Sbjct 1 MNSGTLIGSLIFAAVLAVLIAMVIALMIRGWRRRARLQSELIGALPDLPAAVGPASVITC 60 Query 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 G+YVG TL+PA N RV VGDLGYRS+A LTR+P GI+V+RARAQPIWIP +SI A+R ER Sbjct 61 GMYVGCTLAPASNHRVVVGDLGYRSRAELTRHPDGILVKRARAQPIWIPQDSITAVRTER 120 Query 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWL 161 G+AGK+ A GILAIRWRLPSGTEID GFRADNRDEY WL Sbjct 121 GIAGKIAARDGILAIRWRLPSGTEIDTGFRADNRDEYDGWL 161 >gi|240170758|ref|ZP_04749417.1| hypothetical protein MkanA1_15702 [Mycobacterium kansasii ATCC 12478] Length=169 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 110/162 (68%), Positives = 132/162 (82%), Gaps = 0/162 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 MNSGTL GSLIFA VLV+ IA + LMMRGWRRR+++QAE +G+LPDVP V +AT T R Sbjct 1 MNSGTLVGSLIFATVLVVTIAAVLALMMRGWRRRAQQQAERIGELPDVPGQVGAATATLR 60 Query 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 G+YVG TLSPAWN+RV GDLGYRSKAVLTR+ GI++ER AQP+WIP +SI A+R ER Sbjct 61 GVYVGCTLSPAWNDRVNAGDLGYRSKAVLTRHQDGILLERIGAQPLWIPWQSITALRAER 120 Query 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 G+AGKV A GILA+RW+LPSG EID GFRADNRD+ W++ Sbjct 121 GIAGKVAARDGILAVRWQLPSGVEIDTGFRADNRDDLDGWVD 162 >gi|118617398|ref|YP_905730.1| secreted protein [Mycobacterium ulcerans Agy99] gi|118569508|gb|ABL04259.1| secreted protein [Mycobacterium ulcerans Agy99] Length=169 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 113/161 (71%), Positives = 130/161 (81%), Gaps = 4/161 (2%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 MNSGTL GSL FAAVL +LIA LM+RGWRRR+ Q+EL+G LPD+P V A+V T Sbjct 1 MNSGTLIGSLFFAAVLAVLIA----LMIRGWRRRARLQSELIGALPDLPTAVGPASVITC 56 Query 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 G+YVG TL+PA N RV VGDLGYRS+A LTR+P GI+V+RARAQPIWIP +SI A+R ER Sbjct 57 GMYVGCTLAPASNHRVVVGDLGYRSRAELTRHPDGILVKRARAQPIWIPQDSITAVRTER 116 Query 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWL 161 G+AGK+ A GILAIRWRLPSGTEID GFRADNRDEY WL Sbjct 117 GIAGKIAARDGILAIRWRLPSGTEIDTGFRADNRDEYDGWL 157 >gi|342858665|ref|ZP_08715320.1| hypothetical protein MCOL_07306 [Mycobacterium colombiense CECT 3035] gi|342134369|gb|EGT87549.1| hypothetical protein MCOL_07306 [Mycobacterium colombiense CECT 3035] Length=167 Score = 223 bits (568), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 107/162 (67%), Positives = 129/162 (80%), Gaps = 4/162 (2%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 MNSGTL GSLIFAA +V++I V+ +LMMR W RRS+RQAEL+G+LP++P+ V +AT+TTR Sbjct 1 MNSGTLVGSLIFAAAMVVVITVVIQLMMRSWHRRSQRQAELIGELPEIPDQVGAATITTR 60 Query 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 G Y G+ ++P W ER+ GDLGYRSKAVLTRY GIMVER RA PIWIP +SI IRMER Sbjct 61 GHYCGSMMAPGWAERIAAGDLGYRSKAVLTRYAGGIMVERVRAHPIWIPRDSIKQIRMER 120 Query 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 + G+ IGILAIRWRLPSG EID GFRA++R EY WLE Sbjct 121 RMTGR----IGILAIRWRLPSGVEIDTGFRANDRGEYDRWLE 158 >gi|41407215|ref|NP_960051.1| hypothetical protein MAP1117 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395566|gb|AAS03434.1| hypothetical protein MAP_1117 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461638|gb|EGO40503.1| hypothetical protein MAPs_28960 [Mycobacterium avium subsp. paratuberculosis S397] Length=170 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 116/162 (72%), Positives = 136/162 (84%), Gaps = 0/162 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 MNSGTL GSLIFAAVLV++IAV+ +LMMRGW RR+ RQAEL+G+LP VP+ V +AT T + Sbjct 1 MNSGTLVGSLIFAAVLVVVIAVVIQLMMRGWMRRARRQAELIGELPGVPDKVGTATATLQ 60 Query 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 G+YVG TLSPAWN+RVT GDLGYRSKA LTRYP GI++ER RA PIWIP +SI+A+R ER Sbjct 61 GVYVGCTLSPAWNDRVTAGDLGYRSKAALTRYPEGILLERIRATPIWIPQQSISAVRTER 120 Query 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 G+AGKV A ILAIRWRLPSG EID GFRA+NR EY WL+ Sbjct 121 GMAGKVAARNSILAIRWRLPSGVEIDTGFRANNRGEYDGWLQ 162 >gi|296170751|ref|ZP_06852323.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894566|gb|EFG74303.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=166 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 112/163 (69%), Positives = 135/163 (83%), Gaps = 0/163 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 MNSGTL GSLIFAAVLV++IAV+ +LMMR W+RRS+RQ EL+GDLP+VP+ V +A +TT Sbjct 1 MNSGTLVGSLIFAAVLVVVIAVVIQLMMRSWQRRSQRQTELIGDLPEVPDQVGAAIITTH 60 Query 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 G Y G+ + P W ER+ GDLG+RSKAVLTRY GI+VER RAQPIWIP ++I IRMER Sbjct 61 GHYCGSMMGPDWKERIAAGDLGFRSKAVLTRYSGGILVERQRAQPIWIPKDAITDIRMER 120 Query 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 G+ G+ VA IGILAIRWRLPSG E+D GFRA++RDEY EWLEE Sbjct 121 GMGGRAVARIGILAIRWRLPSGVELDTGFRANHRDEYAEWLEE 163 >gi|254818274|ref|ZP_05223275.1| putative export or membrane protein [Mycobacterium intracellulare ATCC 13950] Length=174 Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 113/163 (70%), Positives = 135/163 (83%), Gaps = 1/163 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 MNSGTL GSLIFAAVLV++I V+ +LMMR W+RR++RQAEL+GDLP +P+ V +A++TTR Sbjct 4 MNSGTLVGSLIFAAVLVVVITVVIQLMMRSWQRRAQRQAELIGDLPQIPDQVGAASITTR 63 Query 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 G Y G+ ++P WNER+ GDLGYRSKAVLTRY GIMVER RA PIWIP +SI AIRMER Sbjct 64 GHYCGSMMAPGWNERIAAGDLGYRSKAVLTRYAGGIMVERLRAHPIWIPQDSITAIRMER 123 Query 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 G+A + A IGILAIRWRLPSG EID GFRAD+R +Y WLEE Sbjct 124 GMAVR-PARIGILAIRWRLPSGVEIDTGFRADHRHDYDPWLEE 165 >gi|118465714|ref|YP_882573.1| hypothetical protein MAV_3391 [Mycobacterium avium 104] gi|254775837|ref|ZP_05217353.1| hypothetical protein MaviaA2_14365 [Mycobacterium avium subsp. avium ATCC 25291] gi|118167001|gb|ABK67898.1| conserved hypothetical protein [Mycobacterium avium 104] Length=170 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 116/162 (72%), Positives = 136/162 (84%), Gaps = 0/162 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR 60 MNSGTL GSLIFAAVLV++IAV+ +LMMRGW RR+ RQAEL+G+LP VP+ V +AT T + Sbjct 1 MNSGTLVGSLIFAAVLVVVIAVVIQLMMRGWVRRARRQAELIGELPGVPDKVGTATATLQ 60 Query 61 GLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMER 120 G+YVG TLSPAWN+RVT GDLGYRSKA LTRYP GI++ER RA PIWIP +SI+A+R ER Sbjct 61 GVYVGCTLSPAWNDRVTAGDLGYRSKAALTRYPEGILLERIRATPIWIPQQSISAVRTER 120 Query 121 GVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 G+AGKV A ILAIRWRLPSG EID GFRA+NR EY WL+ Sbjct 121 GMAGKVAARNSILAIRWRLPSGVEIDTGFRANNRGEYDGWLQ 162 >gi|108799332|ref|YP_639529.1| hypothetical protein Mmcs_2365 [Mycobacterium sp. MCS] gi|119868448|ref|YP_938400.1| hypothetical protein Mkms_2412 [Mycobacterium sp. KMS] gi|108769751|gb|ABG08473.1| putative export or membrane protein [Mycobacterium sp. MCS] gi|119694537|gb|ABL91610.1| putative export or membrane protein [Mycobacterium sp. KMS] Length=166 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 101/164 (62%), Positives = 126/164 (77%), Gaps = 1/164 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVT-T 59 MN+GTL SL+ AAV+V+ I +L R MMRGW R++RQ EL+G LP +P+ VS A + Sbjct 1 MNTGTLVTSLVLAAVIVVAIGLLIRAMMRGWHSRAQRQVELIGKLPPLPDTVSQAVIPPM 60 Query 60 RGLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRME 119 +GLYVG TL+P W++R+ VGDLGYR+KAVLTR+P GIMV+R+ A IWIP ES+ AIR E Sbjct 61 KGLYVGCTLAPNWHDRIVVGDLGYRTKAVLTRFPEGIMVQRSGAHSIWIPAESVTAIRTE 120 Query 120 RGVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 RG+ GK + GILAIRWRLPSGTEID GFR D+R +Y WLEE Sbjct 121 RGMVGKALTHDGILAIRWRLPSGTEIDTGFRGDDRTKYDRWLEE 164 >gi|126434990|ref|YP_001070681.1| hypothetical protein Mjls_2406 [Mycobacterium sp. JLS] gi|126234790|gb|ABN98190.1| putative export or membrane protein [Mycobacterium sp. JLS] Length=166 Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 100/164 (61%), Positives = 126/164 (77%), Gaps = 1/164 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVT-T 59 MN+GTL SL+ AAV+V+ I +L R MMRGW R++RQ +L+G LP +P+ VS A + Sbjct 1 MNTGTLVTSLVLAAVIVVAIGLLIRAMMRGWHSRAQRQVKLIGKLPPLPDTVSQAVIPPM 60 Query 60 RGLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRME 119 +GLYVG TL+P W++R+ VGDLGYR+KAVLTR+P GIMV+R+ A IWIP ES+ AIR E Sbjct 61 KGLYVGCTLAPNWHDRIVVGDLGYRTKAVLTRFPEGIMVQRSGAHSIWIPAESVTAIRTE 120 Query 120 RGVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 RG+ GK + GILAIRWRLPSGTEID GFR D+R +Y WLEE Sbjct 121 RGMVGKALTHDGILAIRWRLPSGTEIDTGFRGDDRTKYDRWLEE 164 >gi|120403646|ref|YP_953475.1| putative export or membrane protein [Mycobacterium vanbaalenii PYR-1] gi|119956464|gb|ABM13469.1| putative export or membrane protein [Mycobacterium vanbaalenii PYR-1] Length=167 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 103/164 (63%), Positives = 127/164 (78%), Gaps = 1/164 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATV-TT 59 MN+ TL SL+ AA+L +LIAVL + MMRGWRRR ERQA+++G LP +P+ V A V T Sbjct 1 MNTPTLVASLVMAAILAVLIAVLIQAMMRGWRRRVERQAKIIGALPPLPDTVGPALVPAT 60 Query 60 RGLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRME 119 +GLYVG+TL P WN+RV GDLG+R+KAVLTRYP GIM++R A PIWIP ++IA IR E Sbjct 61 KGLYVGSTLVPHWNDRVAAGDLGFRAKAVLTRYPEGIMLQRTGAGPIWIPDDAIAEIRTE 120 Query 120 RGVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 + +AGK + GILAIRWRLPSGTEID GFRAD+R +Y WL E Sbjct 121 KNLAGKALTHEGILAIRWRLPSGTEIDTGFRADDRRDYVRWLPE 164 >gi|145224327|ref|YP_001135005.1| hypothetical protein Mflv_3745 [Mycobacterium gilvum PYR-GCK] gi|315444659|ref|YP_004077538.1| hypothetical protein Mspyr1_30860 [Mycobacterium sp. Spyr1] gi|145216813|gb|ABP46217.1| putative export or membrane protein [Mycobacterium gilvum PYR-GCK] gi|315262962|gb|ADT99703.1| hypothetical protein Mspyr1_30860 [Mycobacterium sp. Spyr1] Length=167 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 102/166 (62%), Positives = 127/166 (77%), Gaps = 1/166 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATV-TT 59 MN+ TL SL+ AAV+ +LIAVL + MMRGWR R RQ +++G+LP +P+ V V T Sbjct 1 MNTPTLVTSLVMAAVVAILIAVLIQAMMRGWRHRVARQMQIIGNLPPLPDTVGPTLVPAT 60 Query 60 RGLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRME 119 +GLYVG+TL+P WN+RV GDLG+R+KAVLTRYP GIM++R A PIWIP ESIA IR E Sbjct 61 KGLYVGSTLAPHWNDRVAAGDLGFRAKAVLTRYPEGIMLQRTGAGPIWIPDESIAEIRTE 120 Query 120 RGVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEEPV 165 + +AGK + GILAIRWRLPSGTEID GFRAD+R +Y +WL E V Sbjct 121 KSLAGKALTHEGILAIRWRLPSGTEIDTGFRADDRRDYSKWLPEEV 166 >gi|333990953|ref|YP_004523567.1| hypothetical protein JDM601_2313 [Mycobacterium sp. JDM601] gi|333486921|gb|AEF36313.1| secreted protein [Mycobacterium sp. JDM601] Length=170 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 103/166 (63%), Positives = 126/166 (76%), Gaps = 4/166 (2%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVT-T 59 MN+ T+ SLIFA VLV++I L RLMMRGWRRR + Q L+G LP VP+ V V T Sbjct 1 MNTPTMVASLIFAVVLVLVIGWLIRLMMRGWRRRGQLQETLIGTLPAVPDMVGPPIVAAT 60 Query 60 RGLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRME 119 RG Y+G TL+P WN+RV GDLGYR+KAVLTRYP GIMV+R+ A+PIWIP ++I A+R E Sbjct 61 RGQYLGCTLAPKWNDRVVAGDLGYRTKAVLTRYPEGIMVQRSGARPIWIPQDAILAVRTE 120 Query 120 RGVAGKVV---AGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 RG+AG+ + A G+LAIRWRLPSGTEID GFRAD+R E+ WLE Sbjct 121 RGIAGRAIPTRAHDGVLAIRWRLPSGTEIDTGFRADDRSEHTRWLE 166 >gi|118470888|ref|YP_887361.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118172175|gb|ABK73071.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length=166 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 102/164 (63%), Positives = 121/164 (74%), Gaps = 1/164 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVT-T 59 MN+ TL SL+ AA+LV+LIA L R M+RGW R++RQ EL+G LP +P+ V A V T Sbjct 1 MNTPTLVASLVLAALLVVLIAFLIRQMLRGWVHRAQRQVELIGRLPALPDSVGPALVAPT 60 Query 60 RGLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRME 119 +GLYVG TL P WN++V VGDLG+R+KAVLTR+P GIMV+R A PIWIP ESI IR E Sbjct 61 KGLYVGTTLVPHWNDKVAVGDLGFRAKAVLTRFPEGIMVQRTGAGPIWIPDESIVVIRTE 120 Query 120 RGVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 R +AGK + GIL IRWRLPSG EID GFRAD R E WLEE Sbjct 121 RAIAGKALTHDGILVIRWRLPSGVEIDTGFRADVRAELNRWLEE 164 >gi|169629913|ref|YP_001703562.1| hypothetical protein MAB_2829c [Mycobacterium abscessus ATCC 19977] gi|169241880|emb|CAM62908.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=165 Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 83/161 (52%), Positives = 108/161 (68%), Gaps = 1/161 (0%) Query 1 MNSGTLAGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVT-T 59 MN G G+LI A + L +L RLM RGWR R++RQ +++G+LP P + Sbjct 1 MNHGDFIGALIMAGASLTLAVLLFRLMWRGWRARAQRQTDVVGELPVTPAERGDMVIEPV 60 Query 60 RGLYVGATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRME 119 GLYVG+T++P W +R+ VGDLGYR+ A LTRY GI++ER+ IWIP ++I IR Sbjct 61 EGLYVGSTIAPDWQDRIAVGDLGYRAAATLTRYSRGILLERSGTGEIWIPADAITEIRTA 120 Query 120 RGVAGKVVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEW 160 + +AGKV+ GILAIRWRLPSGTEID GF A R EY+EW Sbjct 121 KALAGKVLTHDGILAIRWRLPSGTEIDTGFLARPRSEYEEW 161 >gi|226366340|ref|YP_002784123.1| hypothetical protein ROP_69310 [Rhodococcus opacus B4] gi|226244830|dbj|BAH55178.1| hypothetical protein [Rhodococcus opacus B4] Length=188 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 73/147 (50%), Positives = 105/147 (72%), Gaps = 1/147 (0%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVT-TRGLYVGATLSPAWNE 74 LV A+ LM GWR R+ RQA+ +G LP VP H+ + T+ GLYVG+TL+P+W + Sbjct 12 LVAFWALAIFLMYVGWRGRARRQADRIGQLPGVPAHLGAQTIAPATGLYVGSTLAPSWQD 71 Query 75 RVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILA 134 R+ VGDLG+R+ ++RY +GI++ER A IWIP +++ A+R ERG+AGKV++ G+L Sbjct 72 RIAVGDLGFRATGEISRYDTGILLERDGASAIWIPQDAVRAVRTERGLAGKVMSKDGVLV 131 Query 135 IRWRLPSGTEIDVGFRADNRDEYQEWL 161 IRW LP+GTEID GFR+D++ Y W+ Sbjct 132 IRWELPTGTEIDTGFRSDDKSVYPAWV 158 >gi|111024100|ref|YP_707072.1| hypothetical protein RHA1_ro07150 [Rhodococcus jostii RHA1] gi|110823630|gb|ABG98914.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=186 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 73/147 (50%), Positives = 104/147 (71%), Gaps = 1/147 (0%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVT-TRGLYVGATLSPAWNE 74 LV A+ LM GWR R+ RQA+ +G LP VP H+ T+ GLYVG+TL+P+W + Sbjct 10 LVAFWALAIFLMYIGWRGRARRQADRVGQLPAVPAHLGKQTIAPATGLYVGSTLAPSWQD 69 Query 75 RVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILA 134 R+ VGDLG+R+ ++RY +GI++ER A IWIP +++ A+R ERG+AGKV++ G+L Sbjct 70 RIAVGDLGFRATGEISRYATGILLERDGASAIWIPQDAVRAVRTERGLAGKVMSKDGVLV 129 Query 135 IRWRLPSGTEIDVGFRADNRDEYQEWL 161 IRW LP+GTEID GFR+D++ Y W+ Sbjct 130 IRWELPTGTEIDTGFRSDDKSVYPAWV 156 >gi|54025591|ref|YP_119833.1| hypothetical protein nfa36210 [Nocardia farcinica IFM 10152] gi|54017099|dbj|BAD58469.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=166 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 70/135 (52%), Positives = 100/135 (75%), Gaps = 1/135 (0%) Query 27 MMRGWRRRSERQAELLGDLPDVPEHVSSATVT-TRGLYVGATLSPAWNERVTVGDLGYRS 85 M RGW+ R+ RQAE +G+LP VP + + + T GLY+G+T++P+W +R+ VGDLG+R+ Sbjct 22 MYRGWQNRAARQAERIGELPPVPAELGAQLLEPTTGLYLGSTIAPSWQDRIAVGDLGFRA 81 Query 86 KAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAIRWRLPSGTEI 145 A LT++ GI++ER+ A IWIP+ES+ A+R ERG AGKV+ G+L IRW+LP+GTEI Sbjct 82 TAELTKFERGILLERSGAAAIWIPSESVTAVRTERGHAGKVMTEDGVLVIRWKLPTGTEI 141 Query 146 DVGFRADNRDEYQEW 160 D GFR D++ Y W Sbjct 142 DTGFRGDDKTVYPAW 156 >gi|312139567|ref|YP_004006903.1| membrane protein [Rhodococcus equi 103S] gi|325672549|ref|ZP_08152245.1| membrane protein [Rhodococcus equi ATCC 33707] gi|311888906|emb|CBH48219.1| putative membrane protein [Rhodococcus equi 103S] gi|325556426|gb|EGD26092.1| membrane protein [Rhodococcus equi ATCC 33707] Length=180 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 71/155 (46%), Positives = 107/155 (70%), Gaps = 1/155 (0%) Query 10 LIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVT-TRGLYVGATL 68 +++ + + A+L LM RGW+ R+ RQA+ +G+LP VP + + + GLYVG+T+ Sbjct 4 ILWVVGCIAVWALLVFLMYRGWKGRARRQADRIGELPQVPADLGERLIAPSTGLYVGSTI 63 Query 69 SPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVA 128 +P+W +RV VGDLG+R+ ++R+ GI++ER A +WIP +I AIR ERG+AGKV+ Sbjct 64 APSWQDRVAVGDLGFRATGEISRWTGGILLERDGASTLWIPEAAIRAIRTERGLAGKVMT 123 Query 129 GIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 G+L IRW LP+GTEID GFR D++ Y +W+ E Sbjct 124 KDGVLVIRWELPTGTEIDTGFRGDDKTVYPQWVRE 158 >gi|226306489|ref|YP_002766449.1| hypothetical protein RER_30020 [Rhodococcus erythropolis PR4] gi|226185606|dbj|BAH33710.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=193 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 72/148 (49%), Positives = 100/148 (68%), Gaps = 1/148 (0%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATV-TTRGLYVGATLSPAWNE 74 L + + LM GWR R+ RQ + +G+LP VP + V T GLYVG+T++P+W + Sbjct 10 LAIFWVAMIGLMYVGWRGRARRQKDKIGELPTVPATLGELLVLPTTGLYVGSTIAPSWQD 69 Query 75 RVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILA 134 R+ VGDLG+R+ ++RY GI+VER A IWIP +SI AIR E G+AGKV++ G+L Sbjct 70 RIAVGDLGFRATCEISRYSGGILVERDGASAIWIPEKSIRAIRTENGLAGKVMSKDGVLV 129 Query 135 IRWRLPSGTEIDVGFRADNRDEYQEWLE 162 IRW LPSGTEID G R D++ Y +W++ Sbjct 130 IRWELPSGTEIDTGVRGDDKTVYPDWVK 157 >gi|229493437|ref|ZP_04387222.1| integral membrane protein [Rhodococcus erythropolis SK121] gi|229319398|gb|EEN85234.1| integral membrane protein [Rhodococcus erythropolis SK121] Length=188 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 72/148 (49%), Positives = 100/148 (68%), Gaps = 1/148 (0%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATV-TTRGLYVGATLSPAWNE 74 L + + LM GWR R+ RQ + +G+LP VP + V T GLYVG+T++P+W + Sbjct 10 LAIFWVAMIGLMYVGWRGRARRQKDKIGELPTVPATLGELLVLPTTGLYVGSTIAPSWQD 69 Query 75 RVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILA 134 R+ VGDLG+R+ ++RY GI+VER A IWIP +SI AIR E G+AGKV++ G+L Sbjct 70 RIAVGDLGFRATCEISRYSGGILVERDGASAIWIPEKSIRAIRTENGLAGKVMSKDGVLV 129 Query 135 IRWRLPSGTEIDVGFRADNRDEYQEWLE 162 IRW LPSGTEID G R D++ Y +W++ Sbjct 130 IRWELPSGTEIDTGVRGDDKTVYPDWVK 157 >gi|326382158|ref|ZP_08203850.1| hypothetical protein SCNU_04401 [Gordonia neofelifaecis NRRL B-59395] gi|326198888|gb|EGD56070.1| hypothetical protein SCNU_04401 [Gordonia neofelifaecis NRRL B-59395] Length=192 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 75/155 (49%), Positives = 106/155 (69%), Gaps = 5/155 (3%) Query 9 SLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTR-GLYVGAT 67 +LI AV + L+A L++RGWR R RQ+E++G+LP P + GLY+G+T Sbjct 11 TLIALAVWLTLVA----LVVRGWRNRGRRQSEIVGELPVAPAVLGERLRGPHTGLYLGST 66 Query 68 LSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVV 127 L+P+W RV VGD G R+ A L+ YP G+++ER+ A IWIP ESI A+R ERG+AGK + Sbjct 67 LAPSWQNRVAVGDFGDRASAQLSAYPDGLLIERSGASQIWIPEESIVAVRTERGLAGKAM 126 Query 128 AGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 + G+L IRW LP+GT++D G RAD++ Y EW+E Sbjct 127 SRDGVLVIRWTLPTGTQVDSGLRADDKSIYPEWVE 161 >gi|262202266|ref|YP_003273474.1| hypothetical protein Gbro_2338 [Gordonia bronchialis DSM 43247] gi|262085613|gb|ACY21581.1| hypothetical protein Gbro_2338 [Gordonia bronchialis DSM 43247] Length=184 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 71/143 (50%), Positives = 98/143 (69%), Gaps = 1/143 (0%) Query 21 AVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATV-TTRGLYVGATLSPAWNERVTVG 79 A L L +RGWR R RQA+ +G+LP P+ + + GLYVG+TL+P+W +RV VG Sbjct 19 ASLVALALRGWRNRGRRQADSIGELPTAPDDLGQRQLGPYTGLYVGSTLAPSWQDRVAVG 78 Query 80 DLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAIRWRL 139 D G R+ A ++ Y +GI++ER A IWIP +SI A+R ERG+AGKV+ G+L IRW L Sbjct 79 DFGDRASATMSAYDAGILLERKGASTIWIPRDSITAVRTERGLAGKVMTADGLLVIRWVL 138 Query 140 PSGTEIDVGFRADNRDEYQEWLE 162 P+GTEID G RAD++ Y +W+ Sbjct 139 PTGTEIDSGLRADDKTIYPDWVH 161 >gi|333919524|ref|YP_004493105.1| hypothetical protein AS9A_1856 [Amycolicicoccus subflavus DQS3-9A1] gi|333481745|gb|AEF40305.1| hypothetical protein AS9A_1856 [Amycolicicoccus subflavus DQS3-9A1] Length=187 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 69/152 (46%), Positives = 100/152 (66%), Gaps = 1/152 (0%) Query 11 IFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATV-TTRGLYVGATLS 69 + +L + +L LM+R WRRR ERQ+ L+G LP+VP+ + + + + GLYVG+TL+ Sbjct 5 LLTVLLFAIWVLLVWLMIRSWRRRGERQSALVGPLPEVPDALGAPLLGPSYGLYVGSTLA 64 Query 70 PAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAG 129 P+W RV VGD G R+ L+ + G+++ R A IWIP + + IR +RG+AGKV+ Sbjct 65 PSWINRVAVGDFGNRADGELSAFDEGLLLTREGASTIWIPRDLVLHIRTDRGLAGKVITR 124 Query 130 IGILAIRWRLPSGTEIDVGFRADNRDEYQEWL 161 G+L IRWR +G EID GFRA ++ EY EWL Sbjct 125 DGLLVIRWRTSTGAEIDTGFRAVDKYEYDEWL 156 >gi|343924550|ref|ZP_08764098.1| hypothetical protein GOALK_017_00080 [Gordonia alkanivorans NBRC 16433] gi|343765485|dbj|GAA11024.1| hypothetical protein GOALK_017_00080 [Gordonia alkanivorans NBRC 16433] Length=206 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 66/155 (43%), Positives = 100/155 (65%), Gaps = 2/155 (1%) Query 10 LIFAAVLVML-IAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSAT-VTTRGLYVGAT 67 I VL++L + + L++ G +++ QAEL+G+LP P + + GLY+G+T Sbjct 38 FIGVCVLIVLGLLSMFYLLITGNKKKQAAQAELIGELPPTPADLGAEQRGPDTGLYLGST 97 Query 68 LSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVV 127 ++P+W RV VGD+ R+ A + + +GI++ R A IWIP E+I A+R ERG+AGKV+ Sbjct 98 MAPSWQNRVAVGDISDRASATIAEFAAGILITRQGASDIWIPREAITAVRTERGIAGKVM 157 Query 128 AGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 + G+L IRW LPSGTEID G RAD++ Y W+ Sbjct 158 SADGVLVIRWVLPSGTEIDSGIRADDKSIYPGWVN 192 >gi|296140282|ref|YP_003647525.1| hypothetical protein Tpau_2583 [Tsukamurella paurometabola DSM 20162] gi|296028416|gb|ADG79186.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=163 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/143 (47%), Positives = 94/143 (66%), Gaps = 1/143 (0%) Query 21 AVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATV-TTRGLYVGATLSPAWNERVTVG 79 A L LM GWRRR RQA +G++P PE ++ G+YVG+T++P W +RV VG Sbjct 17 AGLFSLMALGWRRRGRRQAAAVGEIPSTPEQLTDLVFGPVSGVYVGSTIAPHWQDRVAVG 76 Query 80 DLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAIRWRL 139 D GYR+ L+RY G ++ERAR P+WI ++I +R +AGKV+ G G+L IRW L Sbjct 77 DWGYRATVNLSRYEDGYLMERARGNPMWIADDAIVEVRRAAKLAGKVMPGDGLLVIRWEL 136 Query 140 PSGTEIDVGFRADNRDEYQEWLE 162 P+GT ID GFRAD++ Y++ ++ Sbjct 137 PTGTVIDSGFRADDKTTYRKLMD 159 >gi|256379250|ref|YP_003102910.1| hypothetical protein Amir_5243 [Actinosynnema mirum DSM 43827] gi|255923553|gb|ACU39064.1| hypothetical protein Amir_5243 [Actinosynnema mirum DSM 43827] Length=163 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 55/152 (37%), Positives = 90/152 (60%), Gaps = 1/152 (0%) Query 11 IFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLSP 70 + A + + + ++A M GWR+R+ Q ++L P P + T G+YVG T+ Sbjct 5 LLALLCLAVFVLIAYGMWHGWRKRARAQEQVLAQFPAPPAEQGEPVLETTGVYVGTTIGD 64 Query 71 AWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGI 130 W +RV +GD+G+R++AVL G++VER A P+WIP + R RG+A KV+ Sbjct 65 DWQDRVAIGDIGHRAEAVLRLTGQGVLVERDGASPLWIPAADVRGARTARGLANKVMTAD 124 Query 131 GILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 G+L +RW+L +D GFR D++D Y++W++ Sbjct 125 GLLVVRWQLGDKV-LDTGFRGDDKDVYEQWVD 155 >gi|134098652|ref|YP_001104313.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|291003662|ref|ZP_06561635.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133911275|emb|CAM01388.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length=178 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 55/154 (36%), Positives = 91/154 (60%), Gaps = 2/154 (1%) Query 10 LIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTT-RGLYVGATL 68 L++ ++ L A++ M RGW R+ RQA L P+ PE + + G+YVG T Sbjct 6 LLWVLGMLALAALVFFGMRRGWVNRARRQAAELPGFPEAPEDAGAELLAAATGMYVGTTT 65 Query 69 SPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVA 128 + W +R+ VGD+G+R+ + + SG+ ++R A P+WIP S+ R++ +A KVV Sbjct 66 AGDWQDRIAVGDVGHRANGTVHLHRSGLRIDRDGASPLWIPAASVQDARVDHKLANKVVP 125 Query 129 GIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 G G+L + WRL + +D GFR D+++ + EW+E Sbjct 126 GAGLLVVTWRLGERS-LDTGFRCDDKEVHNEWVE 158 >gi|255327151|ref|ZP_05368226.1| integral membrane protein [Rothia mucilaginosa ATCC 25296] gi|283458033|ref|YP_003362643.1| thiamine biosynthesis lipoprotein [Rothia mucilaginosa DY-18] gi|255295769|gb|EET75111.1| integral membrane protein [Rothia mucilaginosa ATCC 25296] gi|283134058|dbj|BAI64823.1| membrane-associated lipoprotein involved in thiamine biosynthesis [Rothia mucilaginosa DY-18] Length=179 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/158 (37%), Positives = 83/158 (53%), Gaps = 3/158 (1%) Query 8 GSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVS--SATVTTRGLYVG 65 G + A + + L+A+ M GWR R RQA + G L +VPE +A G YV Sbjct 2 GKFLTAVICIALVALCIYGMWHGWRSRLARQANMFGSLKEVPERYEGMTADAAFEGEYVS 61 Query 66 ATLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGK 125 T+ W +RV LG++SK+ L YP I+ R A+ +WIP + +A I +RG+AGK Sbjct 62 TTIFGNWLDRVGFDSLGFKSKSTLLIYPDSIIFTRNGAKDLWIPAKKLAVITTDRGMAGK 121 Query 126 VVAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 VV G++ I W L G + GFR ++ Q L E Sbjct 122 VVEKNGLVVIGWTL-DGHRVQTGFRTRYAEDKQAVLRE 158 >gi|257055587|ref|YP_003133419.1| hypothetical protein Svir_15570 [Saccharomonospora viridis DSM 43017] gi|256585459|gb|ACU96592.1| hypothetical protein Svir_15570 [Saccharomonospora viridis DSM 43017] Length=163 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/154 (34%), Positives = 79/154 (52%), Gaps = 1/154 (0%) Query 10 LIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLS 69 L+ ++ A+ M RGWRR++ Q+ + VP+ + TRG+YV T+S Sbjct 4 LLLTLLVFAFFALCVYGMWRGWRRQARAQSVRIPPFSPVPDDPGEPELETRGIYVSTTMS 63 Query 70 PAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAG 129 W ER+ G R AV+ Y GI ++R+ A WIP +SI + +G+AGKV+ Sbjct 64 GRWQERIVTRGAGLRGPAVVRLYADGIEIDRSGAPSFWIPRDSIVDVHTAKGMAGKVMGT 123 Query 130 IGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 +L WRL E+D G R D+ Y W+E+ Sbjct 124 DSLLVFTWRL-GDVELDTGLRGDDLSVYPRWIEQ 156 >gi|116670811|ref|YP_831744.1| hypothetical protein Arth_2264 [Arthrobacter sp. FB24] gi|116610920|gb|ABK03644.1| conserved hypothetical protein [Arthrobacter sp. FB24] Length=172 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 78/135 (58%), Gaps = 2/135 (1%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLSPAWNER 75 ++ +IAV L+ GWR R RQ+++ LP VP +S T G YV T + W +R Sbjct 10 MLAIIAVAFVLLGIGWRNRLRRQSDV-EQLPAVPAELSQPLATADGQYVATTTAGDWLDR 68 Query 76 VTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAI 135 + V LG R+ A LT +P G++ ER+ A P++IP + IR + G+AGK V G+L + Sbjct 69 IAVHGLGIRTNAELTVHPEGVLFERSGAGPVFIPANRLTGIRQDSGMAGKFVEKDGLLVV 128 Query 136 RWRLPSGTEIDVGFR 150 W L G E+D GFR Sbjct 129 SWTL-GGRELDTGFR 142 >gi|296394710|ref|YP_003659594.1| hypothetical protein Srot_2314 [Segniliparus rotundus DSM 44985] gi|296181857|gb|ADG98763.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=173 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/143 (37%), Positives = 73/143 (52%), Gaps = 6/143 (4%) Query 27 MMRGWRRRSERQAELLGDLPDVPEHVSSATV---TTRGLYVGATLSPAWNERVTVGDLGY 83 M RGW RR Q G LP VP +G+Y+G+ +P W +RV G LG Sbjct 23 MRRGWSRRKMAQRVRFGALPPVPAAADRGEALVGPVKGMYIGSAFAPNWQDRVAWGSLGL 82 Query 84 RSKAVLTRYPSGIMVE---RARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAIRWRLP 140 R++A L + G +++ RA+ +WIP ++ A+R ER AGKV IRW LP Sbjct 83 RARATLVSHMEGFLLDIPSPGRAEGLWIPAAAVVAVRSERAAAGKVARENAFGVIRWTLP 142 Query 141 SGTEIDVGFRADNRDEYQEWLEE 163 +GT +D FRAD+ W+ Sbjct 143 NGTLLDTAFRADDPAAQAAWISS 165 >gi|328881133|emb|CCA54372.1| putative integral membrane protein [Streptomyces venezuelae ATCC 10712] Length=172 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/156 (37%), Positives = 89/156 (58%), Gaps = 2/156 (1%) Query 7 AGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGA 66 AG L + A L++ IA + LM +GW+ R Q++L LP PE +A +T G Y G+ Sbjct 5 AGRLGWVAGLLLFIAFVYWLMRQGWKWRGSLQSDLPA-LPTAPETAGTAKLTLSGRYHGS 63 Query 67 TLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKV 126 T + W +R+ LG RS+ LT +G+ V R A ++P E++ R+++G+AGKV Sbjct 64 TTAGQWLDRIVAHGLGTRSRVELTLTDAGLSVVRPGANDFFVPAEALREARLDKGIAGKV 123 Query 127 VAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 +A G+L + W T +D GFR+D E+ W+E Sbjct 124 LAEGGLLIVTWA-HGDTLLDSGFRSDRAAEHTAWVE 158 >gi|300784654|ref|YP_003764945.1| integral membrane protein [Amycolatopsis mediterranei U32] gi|299794168|gb|ADJ44543.1| integral membrane protein [Amycolatopsis mediterranei U32] gi|340526077|gb|AEK41282.1| integral membrane protein [Amycolatopsis mediterranei S699] Length=164 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/154 (33%), Positives = 78/154 (51%), Gaps = 3/154 (1%) Query 10 LIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLS 69 L+ A L+ V M GWRR++ Q+ + P +P + + G+Y+ T + Sbjct 6 LVLAIFAFFLLCVWG--MYVGWRRKARSQSVQVPPFPAIPSDAGDVLLESTGVYLATTFA 63 Query 70 PAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAG 129 W R+ G R+ AV + G+ VER A WIP E++ IR + +AGKV+ Sbjct 64 GEWQNRIVTRGAGLRTGAVWRLHDGGVAVERGGAPDFWIPREAVTGIRRDTKIAGKVMGT 123 Query 130 IGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 +L I WRL +D GFR D+ D+Y +W+E+ Sbjct 124 DALLVITWRLGD-AGLDTGFRGDDLDDYPQWIEQ 156 >gi|302525867|ref|ZP_07278209.1| hypothetical protein SSMG_02249 [Streptomyces sp. AA4] gi|302434762|gb|EFL06578.1| hypothetical protein SSMG_02249 [Streptomyces sp. AA4] Length=167 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/154 (34%), Positives = 77/154 (50%), Gaps = 3/154 (1%) Query 10 LIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLS 69 L V L+ + M GWRR++ Q+ + P++P + + G+YVG T + Sbjct 6 LTLGIVAFFLLCLFG--MWIGWRRKARSQSARIAPFPEIPADPGEFQLESTGVYVGTTTA 63 Query 70 PAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAG 129 W +RV G RS AV +P G+ VER WIP SI IR + +AGKV Sbjct 64 GNWQDRVVTRGAGPRSGAVWRLHPDGVAVERGGLPDFWIPRASITGIRRDSRLAGKVTGT 123 Query 130 IGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 +L + W+L +D GFR D+ D+Y +W+ E Sbjct 124 DVLLVLTWQL-GDVALDTGFRGDDLDDYPQWINE 156 >gi|319950543|ref|ZP_08024453.1| integral membrane protein [Dietzia cinnamea P4] gi|319435793|gb|EFV91003.1| integral membrane protein [Dietzia cinnamea P4] Length=179 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/155 (39%), Positives = 82/155 (53%), Gaps = 9/155 (5%) Query 10 LIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATV-TTRGLYVGATL 68 ++ AVL+ LI LM GWR RS QA L DLP P + G+Y+G+T+ Sbjct 9 IVVIAVLLGLIG----LMTVGWRNRSRSQAGLFDDLPAPPADPGEIVLGPLSGVYIGSTI 64 Query 69 SPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVA 128 + W R+ LG+RS LT + G+ ++ A A IWIP E + +R +A K V Sbjct 65 AGDWQARIARPPLGHRSAGTLTAHTGGLRLDLADAT-IWIPREDLVDVRRASALANKTVP 123 Query 129 GIGILAIRWRLPSG---TEIDVGFRADNRDEYQEW 160 G GIL RW++ T +D GFRAD++D Y W Sbjct 124 GGGILVARWQVTGADGRTLVDSGFRADDKDGYPRW 158 >gi|119963180|ref|YP_948007.1| hypothetical protein AAur_2267 [Arthrobacter aurescens TC1] gi|119950039|gb|ABM08950.1| conserved hypothetical protein [Arthrobacter aurescens TC1] Length=173 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/137 (39%), Positives = 82/137 (60%), Gaps = 2/137 (1%) Query 15 VLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLSPAWNE 74 + V LI ++ ++ GWR R RQA++ LP+VPE ++ ATV + G YV T + W + Sbjct 10 ITVPLIVIVLAMIWLGWRNRLRRQADV-ERLPEVPEQLTPATVVSDGQYVATTTAGDWLD 68 Query 75 RVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILA 134 R+ V LG R+ A L+ + G + +R+ A P++IP ++ R G+AGK V G+L Sbjct 69 RIAVQGLGIRTNAELSIHAEGALFDRSGAAPVFIPRSALVDSREANGMAGKFVEKDGLLV 128 Query 135 IRWRLPSGTEIDVGFRA 151 I W+L S E+D GFR+ Sbjct 129 INWKLGS-RELDTGFRS 144 >gi|220912755|ref|YP_002488064.1| hypothetical protein Achl_2001 [Arthrobacter chlorophenolicus A6] gi|219859633|gb|ACL39975.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6] Length=172 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/135 (38%), Positives = 75/135 (56%), Gaps = 2/135 (1%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLSPAWNER 75 ++ +IA++ L+ GWR R +RQ+++ G LP P + G YV T W +R Sbjct 10 MLAIIAIVFVLLGIGWRNRLKRQSDV-GPLPQAPAEPGEPSAEAEGQYVATTTGGDWLDR 68 Query 76 VTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAI 135 V V LG R+ A L YP G++ +RA A ++IP S+ +R E G+AGK V G+L + Sbjct 69 VAVHSLGIRTNATLAVYPGGVLFDRAGAPALYIPAASLTGVRQESGMAGKFVEKDGLLVL 128 Query 136 RWRLPSGTEIDVGFR 150 W L E+D GFR Sbjct 129 TW-LHGPHELDTGFR 142 >gi|258654398|ref|YP_003203554.1| hypothetical protein Namu_4277 [Nakamurella multipartita DSM 44233] gi|258557623|gb|ACV80565.1| hypothetical protein Namu_4277 [Nakamurella multipartita DSM 44233] Length=174 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 60/146 (42%), Positives = 84/146 (58%), Gaps = 5/146 (3%) Query 19 LIAVLARL-MMRGWRRRSERQAELLGDLPDVPEHVSSA-TVTTRGLYVGATLSPAWNERV 76 L+ VLA M GWR R RQ+ L +LP VP + T GLYV T + W +R+ Sbjct 12 LVCVLAAWGMWVGWRHRGGRQSSL-PELPTVPNTLGEVRTPPLTGLYVSTTTAGHWQDRI 70 Query 77 TVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVA-GIGILAI 135 LG R+ A++ GI+++R A PI++P + + + G+AGKV+A GIL I Sbjct 71 VARGLGVRADALVRLTDDGILIDRDGADPIFVPVQDLIEVTTAPGIAGKVMAQADGILII 130 Query 136 RWRLPSGTEIDVGFRADNRDEYQEWL 161 RWRL S +E+D G RAD+RD E+L Sbjct 131 RWRLGS-SELDSGLRADDRDSQAEFL 155 >gi|317505980|ref|ZP_07963812.1| glucan endo-1,3-beta-glucosidase [Segniliparus rugosus ATCC BAA-974] gi|316255756|gb|EFV14994.1| glucan endo-1,3-beta-glucosidase [Segniliparus rugosus ATCC BAA-974] Length=173 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/143 (38%), Positives = 71/143 (50%), Gaps = 6/143 (4%) Query 27 MMRGWRRRSERQAELLGDLPDVPEHVSSATV---TTRGLYVGATLSPAWNERVTVGDLGY 83 M RGW RR Q G+L P V G+Y+G++ +P W ERV LG Sbjct 23 MRRGWTRRQRAQRVRFGNLHPTPPADKRGEVLLGPVSGIYIGSSFAPNWQERVAWAGLGL 82 Query 84 RSKAVLTRYPSGIMVE-RARAQP--IWIPTESIAAIRMERGVAGKVVAGIGILAIRWRLP 140 RS+ LT G +++ + QP +WIP ++ A+R ER AGKV IRW LP Sbjct 83 RSRTTLTSQTGGFLLDIDSPGQPDGLWIPAAAVVAVRSERAAAGKVAREGAFGVIRWTLP 142 Query 141 SGTEIDVGFRADNRDEYQEWLEE 163 +GT ID FRAD+ WL Sbjct 143 NGTLIDTAFRADDPSAQAAWLSS 165 >gi|325963377|ref|YP_004241283.1| hypothetical protein Asphe3_19940 [Arthrobacter phenanthrenivorans Sphe3] gi|323469464|gb|ADX73149.1| hypothetical protein Asphe3_19940 [Arthrobacter phenanthrenivorans Sphe3] Length=172 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/151 (36%), Positives = 82/151 (55%), Gaps = 5/151 (3%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLSPAWNER 75 ++ +IAV+ L+ GWR R RQ+++ G LP VP G YV T + W +R Sbjct 10 MLAIIAVVFVLLAIGWRNRLRRQSDV-GQLPAVPTEPGQPLAAAEGQYVATTTAGDWLDR 68 Query 76 VTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAI 135 + V LG R+ A L YP G++ +R+ A ++IP ++ +R + G+AGK V G+L + Sbjct 69 IAVHSLGIRTNAGLAVYPHGVLFDRSGAPALYIPAATLTGVRQDSGMAGKFVEKDGLLVL 128 Query 136 RWRLPSGTEIDVGF---RADNRDEYQEWLEE 163 W S +D GF RA ++D E L+E Sbjct 129 AWTHGS-HALDTGFRTRRAADKDVLFEALQE 158 >gi|284032245|ref|YP_003382176.1| hypothetical protein Kfla_4343 [Kribbella flavida DSM 17836] gi|283811538|gb|ADB33377.1| hypothetical protein Kfla_4343 [Kribbella flavida DSM 17836] Length=163 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/148 (38%), Positives = 83/148 (57%), Gaps = 5/148 (3%) Query 17 VMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLSPAWNERV 76 +++IA M+RGWR R RQA+L LP VP ++ V G+YV T + W +R+ Sbjct 11 LLVIAAGYYGMLRGWRNRQRRQADL-APLPPVPADDTTPGV--EGVYVATTTAGDWMDRI 67 Query 77 TVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVA-GIGILAI 135 V +LG RS A L P+G++ R A ++IP + A+R +RG+AGKV A G+L + Sbjct 68 AVHELGVRSAADLAVSPAGLIFHRQGAADVFIPAAQLTAVRTDRGIAGKVTAEASGLLVV 127 Query 136 RWRLPSGTEIDVGFRADNRDEYQEWLEE 163 W+ G E+D GFR ++ + E Sbjct 128 SWQH-DGRELDTGFRPRHKADTAPLTES 154 >gi|302550126|ref|ZP_07302468.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302467744|gb|EFL30837.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length=174 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/147 (35%), Positives = 81/147 (56%), Gaps = 2/147 (1%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLSPAWNER 75 L + +A++ LM GW+ R Q +L +LP P+ A +T G Y G+T + W +R Sbjct 14 LALFVALVYWLMREGWKWRGTLQGDLP-ELPTTPDETGPARLTMSGRYHGSTTAGQWLDR 72 Query 76 VTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAI 135 + LG RS+A LT +G+ V R A ++P + R+++G+AGKV+ G+L + Sbjct 73 IVAHGLGTRSRAELTLTDAGLDVVRPGANDFFVPAAQLREARLDKGIAGKVLTEGGLLIV 132 Query 136 RWRLPSGTEIDVGFRADNRDEYQEWLE 162 W ID GFR+D+ E+ EW+E Sbjct 133 TW-AHGDRLIDSGFRSDHAAEHNEWVE 158 >gi|295839947|ref|ZP_06826880.1| integral membrane protein [Streptomyces sp. SPB74] gi|295827718|gb|EDY43715.2| integral membrane protein [Streptomyces sp. SPB74] Length=201 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/155 (34%), Positives = 88/155 (57%), Gaps = 2/155 (1%) Query 7 AGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGA 66 +G + + A L++ I ++ LM GW+ R Q+ L LP+ PE + + T G Y G+ Sbjct 25 SGRIGWIAGLLLFITLVYWLMREGWKWRGTLQSGLP-PLPEAPEDPAEPSHTLSGRYHGS 83 Query 67 TLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKV 126 T + W +R+ LG RS+A L+ P+G+ VER A+ ++P ++ R+++G+AGKV Sbjct 84 TTAGQWLDRIVAHGLGTRSRAELSLRPAGLTVERPGARDFFVPAAALRGARLDKGIAGKV 143 Query 127 VAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWL 161 + G+L + W T ID GFR++ E+ W+ Sbjct 144 LTENGLLVVTW-AHGDTLIDSGFRSERAAEHPAWV 177 >gi|345010688|ref|YP_004813042.1| integral membrane protein [Streptomyces violaceusniger Tu 4113] gi|344037037|gb|AEM82762.1| integral membrane protein [Streptomyces violaceusniger Tu 4113] Length=204 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/147 (36%), Positives = 81/147 (56%), Gaps = 2/147 (1%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLSPAWNER 75 L+++IA++ LM GW+ R Q +L +LP P + G Y G+T + W +R Sbjct 39 LLLVIALVYWLMREGWKWRGTLQGDLP-ELPQAPSEPGDPQLRMSGRYHGSTTAGQWLDR 97 Query 76 VTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAI 135 + LG RS+ LT G+ V R AQ +IP + R+++G+AGKV+A G+L I Sbjct 98 IVAHGLGTRSRVELTLTDQGVSVVRPGAQDFFIPAAELRGARLDKGIAGKVLAEGGLLVI 157 Query 136 RWRLPSGTEIDVGFRADNRDEYQEWLE 162 W+L ID GFR+D+ E+ W++ Sbjct 158 TWQLGEKL-IDSGFRSDHAAEHPAWVD 183 >gi|318057068|ref|ZP_07975791.1| integral membrane protein [Streptomyces sp. SA3_actG] gi|318078633|ref|ZP_07985965.1| integral membrane protein [Streptomyces sp. SA3_actF] Length=201 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/155 (34%), Positives = 87/155 (57%), Gaps = 2/155 (1%) Query 7 AGSLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGA 66 AG + + L++ + ++ LM GW+ R QA L LP+ PE + ++T G Y G+ Sbjct 25 AGRVGWIVGLLLFVTLVYWLMREGWKWRGTLQAGLPA-LPEAPEDPAEPSLTLSGRYHGS 83 Query 67 TLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKV 126 T + W +R+ LG RS+A L+ P+G+ VER A ++P ++ R+++G+AGKV Sbjct 84 TTAGQWLDRIVAHGLGTRSRAELSLRPAGLTVERRGAPGFFVPAAALRGARLDKGIAGKV 143 Query 127 VAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWL 161 + G+L + W T ID GFR++ E+ W+ Sbjct 144 LTENGLLVVTW-AHGDTLIDSGFRSERAAEHPAWV 177 >gi|311113660|ref|YP_003984882.1| hypothetical protein HMPREF0733_11991 [Rothia dentocariosa ATCC 17931] gi|310945154|gb|ADP41448.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931] Length=181 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/157 (35%), Positives = 80/157 (51%), Gaps = 3/157 (1%) Query 9 SLIFAAVLVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVS--SATVTTRGLYVGA 66 LI + V ++A+ + RGW+ R +RQ+ + G L DVPE A G YV Sbjct 3 KLIPTLICVAVVALCFFGIWRGWKSRLKRQSTMFGSLKDVPERYDGLKAEAAFEGEYVST 62 Query 67 TLSPAWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKV 126 T+ RV LG+++K+ L Y GI+ R A+ +WIP + +A I RG+ GKV Sbjct 63 TMFGDELNRVGFDQLGFKTKSTLLIYSDGIIFTRNGAKDLWIPAKKLAVITTGRGMIGKV 122 Query 127 VAGIGILAIRWRLPSGTEIDVGFRADNRDEYQEWLEE 163 V G++ I W L G + GFR D+ + LE+ Sbjct 123 VERDGLIVIGWTL-DGHRVQTGFRTRYADQKKITLEK 158 >gi|297155771|gb|ADI05483.1| integral membrane protein [Streptomyces bingchenggensis BCW-1] Length=212 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/152 (36%), Positives = 86/152 (57%), Gaps = 10/152 (6%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPE-----HVSSATVTTRGLYVGATLSP 70 L+++IA++ LM GW+ R+ Q GDLP++P+ + A + G Y G+T + Sbjct 43 LLLVIALVYWLMREGWKWRATIQ----GDLPELPQAPDPAELGPARLHLSGRYHGSTTAG 98 Query 71 AWNERVTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGI 130 W +R+ LG RS+A LT G+ V R A +IP S+ R+++G+AGKV+ Sbjct 99 QWLDRIVAQGLGTRSRAELTLTEQGLAVVRPGASDFFIPAASLRGARLDKGIAGKVLTEG 158 Query 131 GILAIRWRLPSGTEIDVGFRADNRDEYQEWLE 162 G+L I W+L ID GFR+D+ E+ W++ Sbjct 159 GLLVITWQL-GDRLIDSGFRSDHAAEHTAWVD 189 >gi|290961853|ref|YP_003493035.1| protein [Streptomyces scabiei 87.22] gi|260651379|emb|CBG74501.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length=188 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/147 (35%), Positives = 80/147 (55%), Gaps = 2/147 (1%) Query 16 LVMLIAVLARLMMRGWRRRSERQAELLGDLPDVPEHVSSATVTTRGLYVGATLSPAWNER 75 L + +A++ LM GW R Q +L +LPD P+ A + G Y G+T + W +R Sbjct 29 LALFVALVYWLMREGWSWRGTLQGDLP-ELPDAPDEPGEARLGMSGRYHGSTTAGQWLDR 87 Query 76 VTVGDLGYRSKAVLTRYPSGIMVERARAQPIWIPTESIAAIRMERGVAGKVVAGIGILAI 135 + LG RS+ LT +G+ V R A ++P ++ R+++G+AGKV+ G+L + Sbjct 88 IVAHGLGARSRVELTLTDAGLDVVRPGATDFFVPAGALREARLDKGIAGKVLTEGGLLVV 147 Query 136 RWRLPSGTEIDVGFRADNRDEYQEWLE 162 W G +D GFR+D E+ EW+E Sbjct 148 TWE-HGGKLLDSGFRSDRAAEHNEWVE 173 Lambda K H 0.321 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128736477480 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40