BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1383
Length=376
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608523|ref|NP_215899.1| carbamoyl phosphate synthase small ... 761 0.0
gi|31792577|ref|NP_855070.1| carbamoyl phosphate synthase small ... 759 0.0
gi|289745133|ref|ZP_06504511.1| carbamoyl-phosphate synthase sma... 758 0.0
gi|254231631|ref|ZP_04924958.1| carbamoyl-phosphate synthase sma... 757 0.0
gi|15840841|ref|NP_335878.1| carbamoyl phosphate synthase small ... 738 0.0
gi|167968435|ref|ZP_02550712.1| carbamoyl phosphate synthase lar... 719 0.0
gi|240170759|ref|ZP_04749418.1| carbamoyl phosphate synthase sma... 679 0.0
gi|296170750|ref|ZP_06852322.1| carbamoyl-phosphate synthase, sm... 672 0.0
gi|118464947|ref|YP_882572.1| carbamoyl phosphate synthase small... 672 0.0
gi|41407216|ref|NP_960052.1| carbamoyl phosphate synthase small ... 670 0.0
gi|342858666|ref|ZP_08715321.1| carbamoyl phosphate synthase sma... 668 0.0
gi|183982211|ref|YP_001850502.1| carbamoyl-phosphate synthase sm... 655 0.0
gi|254818275|ref|ZP_05223276.1| carbamoyl phosphate synthase sma... 653 0.0
gi|118617399|ref|YP_905731.1| carbamoyl phosphate synthase small... 652 0.0
gi|15827191|ref|NP_301454.1| carbamoyl phosphate synthase small ... 652 0.0
gi|120403647|ref|YP_953476.1| carbamoyl phosphate synthase small... 640 0.0
gi|118473498|ref|YP_887362.1| carbamoyl phosphate synthase small... 626 1e-177
gi|333990952|ref|YP_004523566.1| carbamoyl-phosphate synthase sm... 622 4e-176
gi|315444658|ref|YP_004077537.1| carbamoyl-phosphate synthase sm... 621 7e-176
gi|145224326|ref|YP_001135004.1| carbamoyl phosphate synthase sm... 620 9e-176
gi|126434991|ref|YP_001070682.1| carbamoyl phosphate synthase sm... 611 5e-173
gi|108799333|ref|YP_639530.1| carbamoyl phosphate synthase small... 611 6e-173
gi|169629912|ref|YP_001703561.1| carbamoyl-phosphate synthase, s... 584 1e-164
gi|111024101|ref|YP_707073.1| carbamoyl phosphate synthase small... 577 2e-162
gi|226366341|ref|YP_002784124.1| carbamoyl phosphate synthase sm... 575 3e-162
gi|333919525|ref|YP_004493106.1| carbamoyl-phosphate synthase, s... 570 1e-160
gi|312139568|ref|YP_004006904.1| carbamoyl-phosphate synthase sm... 569 3e-160
gi|226306490|ref|YP_002766450.1| carbamoyl-phosphate synthase sm... 561 8e-158
gi|229493591|ref|ZP_04387376.1| carbamoyl-phosphate synthase, sm... 560 1e-157
gi|262202267|ref|YP_003273475.1| carbamoyl-phosphate synthase sm... 557 9e-157
gi|54025590|ref|YP_119832.1| carbamoyl phosphate synthase small ... 551 8e-155
gi|343924551|ref|ZP_08764099.1| carbamoyl-phosphate synthase sma... 542 3e-152
gi|296140281|ref|YP_003647524.1| carbamoyl-phosphate synthase, s... 538 8e-151
gi|38233918|ref|NP_939685.1| carbamoyl phosphate synthase small ... 523 2e-146
gi|300858549|ref|YP_003783532.1| carbamoyl-phosphate synthase sm... 521 8e-146
gi|337290853|ref|YP_004629874.1| carbamoyl-phosphate synthase sm... 520 1e-145
gi|305680880|ref|ZP_07403687.1| carbamoyl-phosphate synthase, sm... 520 1e-145
gi|296394709|ref|YP_003659593.1| carbamoyl-phosphate synthase sm... 520 2e-145
gi|334696967|gb|AEG81764.1| carbamoyl-phosphate synthase small c... 517 1e-144
gi|336325658|ref|YP_004605624.1| carbamoyl phosphate synthase sm... 515 4e-144
gi|225021353|ref|ZP_03710545.1| hypothetical protein CORMATOL_01... 515 5e-144
gi|317505981|ref|ZP_07963813.1| carbamoyl-phosphate synthase [Se... 514 1e-143
gi|326382159|ref|ZP_08203851.1| carbamoyl phosphate synthase sma... 513 2e-143
gi|319950542|ref|ZP_08024452.1| carbamoyl phosphate synthase sma... 508 5e-142
gi|334563388|ref|ZP_08516379.1| carbamoyl phosphate synthase sma... 506 2e-141
gi|260578795|ref|ZP_05846702.1| carbamoyl-phosphate synthase, sm... 505 5e-141
gi|68536100|ref|YP_250805.1| carbamoyl phosphate synthase small ... 505 6e-141
gi|237785582|ref|YP_002906287.1| carbamoyl-phosphate synthase sm... 502 3e-140
gi|324998658|ref|ZP_08119770.1| carbamoyl-phosphate synthase sma... 499 2e-139
gi|331697312|ref|YP_004333551.1| carbamoyl-phosphate synthase sm... 496 2e-138
>gi|15608523|ref|NP_215899.1| carbamoyl phosphate synthase small subunit [Mycobacterium tuberculosis
H37Rv]
gi|148661174|ref|YP_001282697.1| carbamoyl phosphate synthase small subunit [Mycobacterium tuberculosis
H37Ra]
gi|148822603|ref|YP_001287357.1| carbamoyl phosphate synthase small subunit [Mycobacterium tuberculosis
F11]
57 more sequence titles
Length=376
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/376 (99%), Positives = 376/376 (100%), Gaps = 0/376 (0%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV
Sbjct 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
Query 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV
Sbjct 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD
Sbjct 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA
Sbjct 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA
Sbjct 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
Query 361 EYLFDQFVELMAGEGR 376
EYLFDQFVELMAGEGR
Sbjct 361 EYLFDQFVELMAGEGR 376
>gi|31792577|ref|NP_855070.1| carbamoyl phosphate synthase small subunit [Mycobacterium bovis
AF2122/97]
gi|121637313|ref|YP_977536.1| carbamoyl phosphate synthase small subunit [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224989788|ref|YP_002644475.1| putative carbamoyl phosphate synthase small subunit [Mycobacterium
bovis BCG str. Tokyo 172]
gi|59797845|sp|Q7U055.1|CARA_MYCBO RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|31618166|emb|CAD94279.1| PROBABLE CARBAMOYL-PHOSPHATE SYNTHASE SMALL CHAIN CARA (Carbamoyl-phosphate
synthetase glutamine chain) [Mycobacterium bovis
AF2122/97]
gi|121492960|emb|CAL71431.1| Probable carbamoyl-phosphate synthase small chain carA [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224772901|dbj|BAH25707.1| putative carbamoyl phosphate synthase small subunit [Mycobacterium
bovis BCG str. Tokyo 172]
gi|341601332|emb|CCC64005.1| probable carbamoyl-phosphate synthase small chain carA [Mycobacterium
bovis BCG str. Moreau RDJ]
Length=376
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/376 (99%), Positives = 375/376 (99%), Gaps = 0/376 (0%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTR VV
Sbjct 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRGVV 120
Query 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV
Sbjct 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD
Sbjct 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA
Sbjct 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA
Sbjct 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
Query 361 EYLFDQFVELMAGEGR 376
EYLFDQFVELMAGEGR
Sbjct 361 EYLFDQFVELMAGEGR 376
>gi|289745133|ref|ZP_06504511.1| carbamoyl-phosphate synthase small subunit carA [Mycobacterium
tuberculosis 02_1987]
gi|289757489|ref|ZP_06516867.1| carbamoyl-phosphate synthase subunit small subunit carA [Mycobacterium
tuberculosis T85]
gi|294994943|ref|ZP_06800634.1| carbamoyl phosphate synthase small subunit [Mycobacterium tuberculosis
210]
gi|289685661|gb|EFD53149.1| carbamoyl-phosphate synthase small subunit carA [Mycobacterium
tuberculosis 02_1987]
gi|289713053|gb|EFD77065.1| carbamoyl-phosphate synthase subunit small subunit carA [Mycobacterium
tuberculosis T85]
gi|326903006|gb|EGE49939.1| carbamoyl-phosphate synthase small subunit carA [Mycobacterium
tuberculosis W-148]
gi|339294361|gb|AEJ46472.1| carbamoyl phosphate synthase small subunit [Mycobacterium tuberculosis
CCDC5079]
gi|339297999|gb|AEJ50109.1| carbamoyl phosphate synthase small subunit [Mycobacterium tuberculosis
CCDC5180]
Length=376
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/376 (99%), Positives = 375/376 (99%), Gaps = 0/376 (0%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV
Sbjct 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
Query 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV
Sbjct 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD
Sbjct 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
HVVALTREVLGAGIPLFGICFGNQILGRALGL TYKMVFGHRGINIPVVDHATGRVAVTA
Sbjct 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLPTYKMVFGHRGINIPVVDHATGRVAVTA 300
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA
Sbjct 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
Query 361 EYLFDQFVELMAGEGR 376
EYLFDQFVELMAGEGR
Sbjct 361 EYLFDQFVELMAGEGR 376
>gi|254231631|ref|ZP_04924958.1| carbamoyl-phosphate synthase small chain (glutamine chain) carA
[Mycobacterium tuberculosis C]
gi|124600690|gb|EAY59700.1| carbamoyl-phosphate synthase small chain (glutamine chain) carA
[Mycobacterium tuberculosis C]
Length=382
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/376 (99%), Positives = 374/376 (99%), Gaps = 0/376 (0%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 7 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 66
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV
Sbjct 67 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 126
Query 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV
Sbjct 127 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 186
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD
Sbjct 187 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 246
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA
Sbjct 247 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 306
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFALQ EA QSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA
Sbjct 307 QNHGFALQREASQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 366
Query 361 EYLFDQFVELMAGEGR 376
EYLFDQFVELMAGEGR
Sbjct 367 EYLFDQFVELMAGEGR 382
>gi|15840841|ref|NP_335878.1| carbamoyl phosphate synthase small subunit [Mycobacterium tuberculosis
CDC1551]
gi|13881039|gb|AAK45692.1| carbamoyl-phosphate synthase, small subunit [Mycobacterium tuberculosis
CDC1551]
Length=364
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/364 (99%), Positives = 364/364 (100%), Gaps = 0/364 (0%)
Query 13 VFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTGWNGEDSESR 72
+FTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTGWNGEDSESR
Sbjct 1 MFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTGWNGEDSESR 60
Query 73 GERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHLRSRGSMKAG 132
GERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHLRSRGSMKAG
Sbjct 61 GERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHLRSRGSMKAG 120
Query 133 VFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRFTVAALDLGI 192
VFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRFTVAALDLGI
Sbjct 121 VFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRFTVAALDLGI 180
Query 193 KTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHVVALTREVLGA 252
KTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHVVALTREVLGA
Sbjct 181 KTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHVVALTREVLGA 240
Query 253 GIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQNHGFALQGEAG 312
GIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQNHGFALQGEAG
Sbjct 241 GIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQNHGFALQGEAG 300
Query 313 QSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEYLFDQFVELMA 372
QSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEYLFDQFVELMA
Sbjct 301 QSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEYLFDQFVELMA 360
Query 373 GEGR 376
GEGR
Sbjct 361 GEGR 364
>gi|167968435|ref|ZP_02550712.1| carbamoyl phosphate synthase large subunit [Mycobacterium tuberculosis
H37Ra]
Length=1400
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/357 (99%), Positives = 354/357 (99%), Gaps = 0/357 (0%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV
Sbjct 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
Query 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV
Sbjct 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD
Sbjct 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA
Sbjct 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGP 357
QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEA P
Sbjct 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEARRRP 357
>gi|240170759|ref|ZP_04749418.1| carbamoyl phosphate synthase small subunit [Mycobacterium kansasii
ATCC 12478]
Length=377
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/377 (88%), Positives = 353/377 (94%), Gaps = 3/377 (0%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+SKA+LVLEDGRVFTG PFGA GQ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MSKALLVLEDGRVFTGTPFGAIGQTLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWNGED+ESRG++IWVAGYAVRDPSPRASNWRATGTLEDELIRQ IVGIAGIDTRAVV
Sbjct 61 NTGWNGEDAESRGDKIWVAGYAVRDPSPRASNWRATGTLEDELIRQHIVGIAGIDTRAVV 120
Query 121 RHLRSRGSMKAGVFSDGALAEP---ADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGP 177
RHLRSRGSMKAGVFS ALAE A+L+ RV+ Q MLGADLAGEVST +PYVVEP+GP
Sbjct 121 RHLRSRGSMKAGVFSGAALAEAPDVAELLQRVQGQPPMLGADLAGEVSTPQPYVVEPEGP 180
Query 178 PGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPA 237
PG+ RFTV A DLGIKTNTPRNFARRGIR +VLP+S +F+Q+A++NPHGVFLSNGPGDPA
Sbjct 181 PGLPRFTVVAFDLGIKTNTPRNFARRGIRSYVLPSSASFDQVADINPHGVFLSNGPGDPA 240
Query 238 TADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVA 297
TADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVA
Sbjct 241 TADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVIDHATGRVA 300
Query 298 VTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGP 357
VTAQNHGFAL+GEAGQ F TPFGPAVVSHTCANDGVVEGV+L DGRAFSVQYHPEAAAGP
Sbjct 301 VTAQNHGFALEGEAGQRFDTPFGPAVVSHTCANDGVVEGVRLTDGRAFSVQYHPEAAAGP 360
Query 358 HDAEYLFDQFVELMAGE 374
HDAEYLFDQFVELM G+
Sbjct 361 HDAEYLFDQFVELMEGQ 377
>gi|296170750|ref|ZP_06852322.1| carbamoyl-phosphate synthase, small subunit [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894565|gb|EFG74302.1| carbamoyl-phosphate synthase, small subunit [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=376
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/372 (88%), Positives = 348/372 (94%), Gaps = 0/372 (0%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
+KA+LVLEDGRVF G FG GQ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN
Sbjct 3 NKALLVLEDGRVFAGTAFGKVGQTLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 62
Query 62 TGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVR 121
TGWN ED+ESRG++IWVAGYAVRDPSPRASNWRATGTLEDEL+RQ +VGIAGIDTRAVVR
Sbjct 63 TGWNDEDAESRGDKIWVAGYAVRDPSPRASNWRATGTLEDELVRQHVVGIAGIDTRAVVR 122
Query 122 HLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVS 181
HLR+RGSMKAGVFS ALA+PA+L+ RVR QQSMLGADLAGEVST E Y+VEP+GPPG S
Sbjct 123 HLRTRGSMKAGVFSGAALADPAELVERVRGQQSMLGADLAGEVSTPERYIVEPEGPPGSS 182
Query 182 RFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADH 241
RFTV ALDLGIKTNTPRNFARRG+R HVLP+ST+F +IAE+ P GVFLSNGPGDPATAD
Sbjct 183 RFTVVALDLGIKTNTPRNFARRGVRSHVLPSSTSFAEIAEIAPDGVFLSNGPGDPATADD 242
Query 242 VVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQ 301
VVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVAVTAQ
Sbjct 243 VVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVMDHATGRVAVTAQ 302
Query 302 NHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAE 361
NHGFAL+GEAGQSF TPFG AVVSHTCANDGVVEGVKL DGRAFSVQYHPEAAAGPHDAE
Sbjct 303 NHGFALEGEAGQSFDTPFGRAVVSHTCANDGVVEGVKLADGRAFSVQYHPEAAAGPHDAE 362
Query 362 YLFDQFVELMAG 373
YLFDQF++LMAG
Sbjct 363 YLFDQFIDLMAG 374
>gi|118464947|ref|YP_882572.1| carbamoyl phosphate synthase small subunit [Mycobacterium avium
104]
gi|254775836|ref|ZP_05217352.1| carbamoyl phosphate synthase small subunit [Mycobacterium avium
subsp. avium ATCC 25291]
gi|48928146|gb|AAT47751.1| carbamoyl-phosphate synthase subunit [Mycobacterium avium]
gi|118166234|gb|ABK67131.1| carbamoyl-phosphate synthase, small subunit [Mycobacterium avium
104]
Length=373
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/372 (89%), Positives = 347/372 (94%), Gaps = 3/372 (0%)
Query 3 KAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 62
KA LVLEDGRVFTG PFGA GQ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT
Sbjct 4 KAQLVLEDGRVFTGTPFGAIGQTLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 63
Query 63 GWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRH 122
GWNGED+ESRG++IWVAGYAVRDPSPR SNWRATG+LEDELIRQRIVGIA IDTRAVVRH
Sbjct 64 GWNGEDAESRGDKIWVAGYAVRDPSPRVSNWRATGSLEDELIRQRIVGIARIDTRAVVRH 123
Query 123 LRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSR 182
LR+RGSMKAGVFS ALA+P +L+ RVR QQSMLGADLAGEVST + Y+VEP+GPP R
Sbjct 124 LRTRGSMKAGVFSGDALADPDELVQRVRGQQSMLGADLAGEVSTPDAYIVEPEGPP---R 180
Query 183 FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHV 242
FTVAALDLGIKTNTPRNFARRGIR HVLP+S TFEQIA+L P GVFLSNGPGDPATADH+
Sbjct 181 FTVAALDLGIKTNTPRNFARRGIRSHVLPSSATFEQIADLRPDGVFLSNGPGDPATADHI 240
Query 243 VALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQN 302
VA+TREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVAVTAQN
Sbjct 241 VAVTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVIDHATGRVAVTAQN 300
Query 303 HGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEY 362
HGFALQGEAGQ+F TPFG AVVSHTCANDGVVEGVKL DGRAFSVQYHPEAAAGPHDA Y
Sbjct 301 HGFALQGEAGQAFDTPFGAAVVSHTCANDGVVEGVKLADGRAFSVQYHPEAAAGPHDANY 360
Query 363 LFDQFVELMAGE 374
LFDQF+ELM G+
Sbjct 361 LFDQFIELMEGD 372
>gi|41407216|ref|NP_960052.1| carbamoyl phosphate synthase small subunit [Mycobacterium avium
subsp. paratuberculosis K-10]
gi|60389696|sp|Q741H2.1|CARA_MYCPA RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|41395567|gb|AAS03435.1| CarA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461637|gb|EGO40502.1| carbamoyl-phosphate synthase, small subunit [Mycobacterium avium
subsp. paratuberculosis S397]
Length=373
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/372 (89%), Positives = 346/372 (94%), Gaps = 3/372 (0%)
Query 3 KAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 62
KA LVLEDGRVFTG FGA GQ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT
Sbjct 4 KAQLVLEDGRVFTGTAFGAIGQTLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 63
Query 63 GWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRH 122
GWNGED+ESRG++IWVAGYAVRDPSPR SNWRATG+LEDELIRQRIVGIA IDTRAVVRH
Sbjct 64 GWNGEDAESRGDKIWVAGYAVRDPSPRVSNWRATGSLEDELIRQRIVGIARIDTRAVVRH 123
Query 123 LRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSR 182
LR+RGSMKAGVFS ALA+P +L+ RVR QQSMLGADLAGEVST + Y+VEP+GPP R
Sbjct 124 LRTRGSMKAGVFSGDALADPDELVQRVRGQQSMLGADLAGEVSTPDAYIVEPEGPP---R 180
Query 183 FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHV 242
FTVAALDLGIKTNTPRNFARRGIR HVLP+S TFEQIA+L P GVFLSNGPGDPATADH+
Sbjct 181 FTVAALDLGIKTNTPRNFARRGIRSHVLPSSATFEQIADLRPDGVFLSNGPGDPATADHI 240
Query 243 VALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQN 302
VA+TREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVAVTAQN
Sbjct 241 VAVTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVIDHATGRVAVTAQN 300
Query 303 HGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEY 362
HGFALQGEAGQSF TPFG AVVSHTCANDGVVEGVKL DGRAFSVQYHPEAAAGPHDA Y
Sbjct 301 HGFALQGEAGQSFDTPFGAAVVSHTCANDGVVEGVKLADGRAFSVQYHPEAAAGPHDANY 360
Query 363 LFDQFVELMAGE 374
LFDQF+ELM G+
Sbjct 361 LFDQFIELMEGD 372
>gi|342858666|ref|ZP_08715321.1| carbamoyl phosphate synthase small subunit [Mycobacterium colombiense
CECT 3035]
gi|342134370|gb|EGT87550.1| carbamoyl phosphate synthase small subunit [Mycobacterium colombiense
CECT 3035]
Length=373
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/376 (86%), Positives = 351/376 (94%), Gaps = 3/376 (0%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
++KA LVLEDGRVFTGRPFG GQ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MTKAQLVLEDGRVFTGRPFGKVGQTLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWNGED+ESRG++IWVAGYAVRDPSPR SNWR+TGTLEDEL+RQ +VGIAGIDTRAVV
Sbjct 61 NTGWNGEDAESRGDKIWVAGYAVRDPSPRPSNWRSTGTLEDELVRQHVVGIAGIDTRAVV 120
Query 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
RHLR+RGSMKAGVFS +LA+ +L+ARVR Q+SMLGADLAGEVST + Y+VEP+G P
Sbjct 121 RHLRTRGSMKAGVFSGDSLADADELLARVRGQRSMLGADLAGEVSTPDTYIVEPEGSP-- 178
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
RFTVAALDLGIKTNTPRNFARRG+R HVL +S T++QIA+L P GVFLSNGPGDPATAD
Sbjct 179 -RFTVAALDLGIKTNTPRNFARRGVRTHVLASSATYQQIADLKPDGVFLSNGPGDPATAD 237
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
H+VA+TREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVAVTA
Sbjct 238 HIVAVTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVIDHATGRVAVTA 297
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFAL+GEAGQ+F TPFG AVVSHTCANDGVVEGVKL DG+AFSVQYHPEAAAGPHDA
Sbjct 298 QNHGFALEGEAGQTFDTPFGQAVVSHTCANDGVVEGVKLTDGQAFSVQYHPEAAAGPHDA 357
Query 361 EYLFDQFVELMAGEGR 376
EYLFDQF+ELMAGEGR
Sbjct 358 EYLFDQFIELMAGEGR 373
>gi|183982211|ref|YP_001850502.1| carbamoyl-phosphate synthase small chain CarA [Mycobacterium
marinum M]
gi|183175537|gb|ACC40647.1| carbamoyl-phosphate synthase small chain CarA [Mycobacterium
marinum M]
Length=375
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/377 (86%), Positives = 345/377 (92%), Gaps = 6/377 (1%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+SKA+LVLEDGRVFTG FGA GQ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MSKALLVLEDGRVFTGMSFGAVGQTLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWN ED ESRG++IWVAGYAVRDPSPRASNWR++ TLEDELIRQRIVGIAGIDTRAVV
Sbjct 61 NTGWNDEDGESRGDKIWVAGYAVRDPSPRASNWRSSTTLEDELIRQRIVGIAGIDTRAVV 120
Query 121 RHLRSRGSMKAGVFSDGALA---EPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGP 177
RHLRSRGSMKAGVFS AL + A+L+ RV AQ MLGADLAGEVST E Y+VEP+GP
Sbjct 121 RHLRSRGSMKAGVFSGAALTAGTQVAELVERVAAQPPMLGADLAGEVSTPEAYIVEPEGP 180
Query 178 PGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPA 237
RFTV ALDLGIKTNTPRNFARRG+R HVLP+S TF+QIA++ P GVFLSNGPGDPA
Sbjct 181 ---QRFTVVALDLGIKTNTPRNFARRGVRSHVLPSSVTFDQIADIKPDGVFLSNGPGDPA 237
Query 238 TADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVA 297
TADHVV+LTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVA
Sbjct 238 TADHVVSLTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVIDHATGRVA 297
Query 298 VTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGP 357
VTAQNHGFAL+GEAGQSF TPFG A VSHTCANDGVVEGV+LVDGRAFSVQYHPEAAAGP
Sbjct 298 VTAQNHGFALEGEAGQSFETPFGRAAVSHTCANDGVVEGVRLVDGRAFSVQYHPEAAAGP 357
Query 358 HDAEYLFDQFVELMAGE 374
HDAEYLFDQFV+LMAG+
Sbjct 358 HDAEYLFDQFVDLMAGD 374
>gi|254818275|ref|ZP_05223276.1| carbamoyl phosphate synthase small subunit [Mycobacterium intracellulare
ATCC 13950]
Length=372
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/371 (86%), Positives = 340/371 (92%), Gaps = 3/371 (0%)
Query 6 LVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTGWN 65
+VLEDGRVFTG PFG GQ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTGWN
Sbjct 1 MVLEDGRVFTGTPFGKIGQTLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTGWN 60
Query 66 GEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHLRS 125
ED+ESRG++IWVAGYAVRDPSPR SNWRATGTLEDELIRQ +VGIAGIDTRAVVRHLR+
Sbjct 61 DEDAESRGDKIWVAGYAVRDPSPRPSNWRATGTLEDELIRQHVVGIAGIDTRAVVRHLRT 120
Query 126 RGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRFTV 185
RGSMKAGVFS ALA+P +L+ RVR QQSMLGADLAGEVST + Y+VEP+G P RFTV
Sbjct 121 RGSMKAGVFSGDALADPDELLQRVRGQQSMLGADLAGEVSTPDTYIVEPEGEP---RFTV 177
Query 186 AALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHVVAL 245
AALDLGIKTNTPRNFARRGIR HVL +S T+ QIA++ P G+FLSNGPGDPATADH+VA+
Sbjct 178 AALDLGIKTNTPRNFARRGIRTHVLASSATYRQIADIKPDGMFLSNGPGDPATADHIVAV 237
Query 246 TREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQNHGF 305
TREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVAVTAQNHGF
Sbjct 238 TREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVIDHATGRVAVTAQNHGF 297
Query 306 ALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEYLFD 365
AL+GEAGQSF TPFG A+VSHTCANDGVVEGVKL DGRAFSVQYHPEAAAGPHDA YLFD
Sbjct 298 ALEGEAGQSFDTPFGQAIVSHTCANDGVVEGVKLADGRAFSVQYHPEAAAGPHDANYLFD 357
Query 366 QFVELMAGEGR 376
QF+ELMA R
Sbjct 358 QFIELMAAPNR 368
>gi|118617399|ref|YP_905731.1| carbamoyl phosphate synthase small subunit [Mycobacterium ulcerans
Agy99]
gi|118569509|gb|ABL04260.1| carbamoyl-phosphate synthase small chain CarA [Mycobacterium
ulcerans Agy99]
Length=375
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/377 (86%), Positives = 344/377 (92%), Gaps = 6/377 (1%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+SKA+LVLEDGRVFTG FGA GQ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MSKALLVLEDGRVFTGMSFGAVGQTLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWN ED ESRG++IWVAGYAVRDPSPRASNWR++ TLEDELIRQ IVGIAGIDTRAVV
Sbjct 61 NTGWNDEDGESRGDKIWVAGYAVRDPSPRASNWRSSTTLEDELIRQCIVGIAGIDTRAVV 120
Query 121 RHLRSRGSMKAGVFSDGALA---EPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGP 177
RHLRSRGSMKAGVFS AL + A+L+ RV AQ MLGADLAGEVST E Y+VEP+GP
Sbjct 121 RHLRSRGSMKAGVFSGAALTAGTQVAELVERVAAQPPMLGADLAGEVSTPEAYIVEPEGP 180
Query 178 PGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPA 237
RFTV ALDLGIKTNTPRNFARRG+R HVLP+S TF+QIA++ P GVFLSNGPGDPA
Sbjct 181 ---QRFTVVALDLGIKTNTPRNFARRGVRSHVLPSSVTFDQIADIKPDGVFLSNGPGDPA 237
Query 238 TADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVA 297
TADHVV+LTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVA
Sbjct 238 TADHVVSLTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVIDHATGRVA 297
Query 298 VTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGP 357
VTAQNHGFAL+GEAGQSF TPFG A VSHTCANDGVVEGV+LVDGRAFSVQYHPEAAAGP
Sbjct 298 VTAQNHGFALEGEAGQSFETPFGRAAVSHTCANDGVVEGVRLVDGRAFSVQYHPEAAAGP 357
Query 358 HDAEYLFDQFVELMAGE 374
HDAEYLFDQFV+LMAG+
Sbjct 358 HDAEYLFDQFVDLMAGD 374
>gi|15827191|ref|NP_301454.1| carbamoyl phosphate synthase small subunit [Mycobacterium leprae
TN]
gi|221229669|ref|YP_002503085.1| carbamoyl phosphate synthase small subunit [Mycobacterium leprae
Br4923]
gi|15213939|sp|Q9CCR3.1|CARA_MYCLE RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|13092739|emb|CAC30043.1| putative carbamoyl-phosphate synthase subunit [Mycobacterium
leprae]
gi|219932776|emb|CAR70628.1| putative carbamoyl-phosphate synthase subunit [Mycobacterium
leprae Br4923]
Length=375
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/377 (86%), Positives = 338/377 (90%), Gaps = 6/377 (1%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+SKA+LVLEDGRVFTG PFGA GQ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MSKALLVLEDGRVFTGMPFGAIGQTLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWN +D ESR +RIWVAGYAVRDPSP ASNWRATGTLEDEL+RQRIVGIAGIDTRAVV
Sbjct 61 NTGWNDQDGESRDDRIWVAGYAVRDPSPCASNWRATGTLEDELVRQRIVGIAGIDTRAVV 120
Query 121 RHLRSRGSMKAGVFSDGALAEPAD---LIARVRAQQSMLGADLAGEVSTAEPYVVEPDGP 177
RHLR GSMKAGVFS A+ EP + L+ VR QQSMLGADL GE ST + YVVEP G
Sbjct 121 RHLRRYGSMKAGVFSGKAMIEPLNIEALVQHVRTQQSMLGADLVGEASTLDAYVVEPKGK 180
Query 178 PGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPA 237
RFTVAALDLGIKTNTPRNFARRGIR +VLPAS TF QIA++ PHG+FLSNGPGDPA
Sbjct 181 ---ERFTVAALDLGIKTNTPRNFARRGIRSYVLPASATFNQIADIKPHGLFLSNGPGDPA 237
Query 238 TADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVA 297
TADHVVALTREVL AGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVA
Sbjct 238 TADHVVALTREVLNAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVIDHATGRVA 297
Query 298 VTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGP 357
VTAQNHGFAL+GEAGQSF TPFG AVVSHTCANDGVVEGVKL DGRAFSVQYHPEAAAGP
Sbjct 298 VTAQNHGFALEGEAGQSFDTPFGSAVVSHTCANDGVVEGVKLADGRAFSVQYHPEAAAGP 357
Query 358 HDAEYLFDQFVELMAGE 374
HDAEYLFD FVELMA +
Sbjct 358 HDAEYLFDSFVELMAAQ 374
>gi|120403647|ref|YP_953476.1| carbamoyl phosphate synthase small subunit [Mycobacterium vanbaalenii
PYR-1]
gi|119956465|gb|ABM13470.1| carbamoyl-phosphate synthase small subunit [Mycobacterium vanbaalenii
PYR-1]
Length=376
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/375 (85%), Positives = 338/375 (91%), Gaps = 4/375 (1%)
Query 3 KAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 62
KA+LVLEDGR+FTG FGA G+ LGEAVFST MSGYQETLTDPSYHRQIVVATAPQIGNT
Sbjct 5 KALLVLEDGRIFTGTTFGAVGETLGEAVFSTAMSGYQETLTDPSYHRQIVVATAPQIGNT 64
Query 63 GWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRH 122
GWN +DSESRG++IWVAGYAVRDPSPRASNWRATGTL+DEL RQ IVGIAGIDTRAVVRH
Sbjct 65 GWNLDDSESRGDKIWVAGYAVRDPSPRASNWRATGTLDDELQRQSIVGIAGIDTRAVVRH 124
Query 123 LRSRGSMKAGVFSDGALAEPAD-LIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVS 181
LRSRGSMKAGVFS A P D L+ARVR Q+ MLGADLAGEVST YVVEP+G
Sbjct 125 LRSRGSMKAGVFSGAAADAPVDELVARVRGQKPMLGADLAGEVSTDAGYVVEPEGS---Q 181
Query 182 RFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADH 241
RFTVAALDLGIKTNTPRNFARRG+R VLP+S TF QIA+L P GVFLSNGPGDPATADH
Sbjct 182 RFTVAALDLGIKTNTPRNFARRGVRSVVLPSSATFAQIADLRPDGVFLSNGPGDPATADH 241
Query 242 VVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQ 301
+VA+TREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DHATGRVA+TAQ
Sbjct 242 IVAVTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVIDHATGRVAITAQ 301
Query 302 NHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAE 361
NHGFAL+GEAGQ+F TPFG A VSHTCANDGVVEGV+L GRAFSVQYHPEAAAGPHDAE
Sbjct 302 NHGFALEGEAGQTFDTPFGDAEVSHTCANDGVVEGVRLKSGRAFSVQYHPEAAAGPHDAE 361
Query 362 YLFDQFVELMAGEGR 376
YLFDQF+ELMAGE +
Sbjct 362 YLFDQFIELMAGENK 376
>gi|118473498|ref|YP_887362.1| carbamoyl phosphate synthase small subunit [Mycobacterium smegmatis
str. MC2 155]
gi|118174785|gb|ABK75681.1| carbamoyl-phosphate synthase, small subunit [Mycobacterium smegmatis
str. MC2 155]
Length=382
Score = 626 bits (1615), Expect = 1e-177, Method: Compositional matrix adjust.
Identities = 308/372 (83%), Positives = 334/372 (90%), Gaps = 3/372 (0%)
Query 3 KAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 62
KAVLVLEDGRVFTG FGA GQ LGEAVFSTGMSGYQETLTDPSY+ QIVVATAPQIGNT
Sbjct 11 KAVLVLEDGRVFTGVSFGAVGQTLGEAVFSTGMSGYQETLTDPSYYGQIVVATAPQIGNT 70
Query 63 GWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRH 122
GWN ED ESRG++IWVAGYAVRDPSPRASNWRAT TL+DEL+ Q IVGIAGIDTRAVVRH
Sbjct 71 GWNDEDGESRGDKIWVAGYAVRDPSPRASNWRATRTLDDELVAQGIVGIAGIDTRAVVRH 130
Query 123 LRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSR 182
LR+RGSMKAGVFS ALA+ L+ RVR Q SMLGADLAG+V+T + YVV+PDG R
Sbjct 131 LRTRGSMKAGVFSGDALADVDALLERVRNQPSMLGADLAGKVTTGQTYVVDPDGD---HR 187
Query 183 FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHV 242
FTVAA+DLGIKTNTPRNFARRG+R HVLPAS TF+QIA+ P GVFLSNGPGDPATADH+
Sbjct 188 FTVAAVDLGIKTNTPRNFARRGVRTHVLPASATFDQIADFKPDGVFLSNGPGDPATADHI 247
Query 243 VALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQN 302
V +TREVLGAGIPLFGICFGNQILGRALG STYKMVFGHRGINIPVVDH TGRVA+TAQN
Sbjct 248 VEVTREVLGAGIPLFGICFGNQILGRALGRSTYKMVFGHRGINIPVVDHITGRVAITAQN 307
Query 303 HGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEY 362
HGFAL+GEAG+ F TPFG A VSHTCANDGVVEGV+LV+G+AFSVQYHPEAA GPHDAEY
Sbjct 308 HGFALEGEAGEKFDTPFGTAEVSHTCANDGVVEGVRLVNGKAFSVQYHPEAAGGPHDAEY 367
Query 363 LFDQFVELMAGE 374
LFDQF++LMAGE
Sbjct 368 LFDQFIDLMAGE 379
>gi|333990952|ref|YP_004523566.1| carbamoyl-phosphate synthase small chain CarA [Mycobacterium
sp. JDM601]
gi|333486920|gb|AEF36312.1| carbamoyl-phosphate synthase small chain CarA [Mycobacterium
sp. JDM601]
Length=372
Score = 622 bits (1603), Expect = 4e-176, Method: Compositional matrix adjust.
Identities = 304/369 (83%), Positives = 329/369 (90%), Gaps = 3/369 (0%)
Query 3 KAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 62
+AVLVLEDGR+FTGRPFGA GQ+LGEAVFST MSGYQETLTDPSYHRQI+VATAPQIGNT
Sbjct 4 RAVLVLEDGRIFTGRPFGAVGQSLGEAVFSTAMSGYQETLTDPSYHRQILVATAPQIGNT 63
Query 63 GWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRH 122
GWN EDSESR ERIWVAGY VRDPSPRASNWRATGTL++EL+ Q IVG+AG+DTR VVRH
Sbjct 64 GWNREDSESRDERIWVAGYVVRDPSPRASNWRATGTLDEELVSQGIVGVAGVDTRTVVRH 123
Query 123 LRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSR 182
LR+ G+MKAGVFS ALA P +L+ RVRAQ SMLGADLAG+VST YVVEPDG R
Sbjct 124 LRNHGAMKAGVFSGDALAAPEELVDRVRAQPSMLGADLAGQVSTDTAYVVEPDG---AHR 180
Query 183 FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHV 242
FTVAALDLGIK NTPRNF RRGIRCHVLP+S F +A+L P GVFLSNGPGDPATAD +
Sbjct 181 FTVAALDLGIKINTPRNFTRRGIRCHVLPSSVDFAALADLKPDGVFLSNGPGDPATADRL 240
Query 243 VALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQN 302
VALTREV+GAGIPLFGICFGNQILGRALG TYKM FGHRGINIPV+DHATGRVAVTAQN
Sbjct 241 VALTREVIGAGIPLFGICFGNQILGRALGRKTYKMKFGHRGINIPVIDHATGRVAVTAQN 300
Query 303 HGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEY 362
HGFAL+G+AG+ F T FGPAVVSHTCANDGVVEGVKL DGRAFSVQYHPEAAAGPHDA +
Sbjct 301 HGFALEGQAGEVFNTDFGPAVVSHTCANDGVVEGVKLADGRAFSVQYHPEAAAGPHDAGH 360
Query 363 LFDQFVELM 371
LFDQFV+LM
Sbjct 361 LFDQFVDLM 369
>gi|315444658|ref|YP_004077537.1| carbamoyl-phosphate synthase small subunit [Mycobacterium sp.
Spyr1]
gi|315262961|gb|ADT99702.1| carbamoyl-phosphate synthase small subunit [Mycobacterium sp.
Spyr1]
Length=387
Score = 621 bits (1601), Expect = 7e-176, Method: Compositional matrix adjust.
Identities = 308/369 (84%), Positives = 330/369 (90%), Gaps = 4/369 (1%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A LVLEDGRVFTG PFGA G+ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG
Sbjct 14 ARLVLEDGRVFTGTPFGAEGETLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 73
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN EDSESRG++IWVAGYAVRDPSPRASNWRATGTL+DEL RQ IVGIAGIDTRAVVRHL
Sbjct 74 WNHEDSESRGDKIWVAGYAVRDPSPRASNWRATGTLDDELKRQGIVGIAGIDTRAVVRHL 133
Query 124 RSRGSMKAGVFS-DGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSR 182
RSRGSMKAG+FS + A A DLIARVR Q +MLGADLAGEVST Y V+ +GP R
Sbjct 134 RSRGSMKAGIFSGEQADASVDDLIARVRDQAAMLGADLAGEVSTDTDYEVDSEGP---QR 190
Query 183 FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHV 242
FTVAALDLGIKTNTPRNFARRG+R VLP+S TF+ IAEL P GVFLSNGPGDPATADH+
Sbjct 191 FTVAALDLGIKTNTPRNFARRGVRSIVLPSSATFDHIAELKPDGVFLSNGPGDPATADHI 250
Query 243 VALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQN 302
V +TREVL AGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DH TGRVA+TAQN
Sbjct 251 VGVTREVLDAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVMDHTTGRVAITAQN 310
Query 303 HGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEY 362
HGFAL+GEAGQ+F TPFG A VSHTCANDGVVEGV+L +GRAFSVQYHPEAAAGP DAEY
Sbjct 311 HGFALEGEAGQTFDTPFGQAEVSHTCANDGVVEGVRLSNGRAFSVQYHPEAAAGPRDAEY 370
Query 363 LFDQFVELM 371
LFD F++LM
Sbjct 371 LFDTFIDLM 379
>gi|145224326|ref|YP_001135004.1| carbamoyl phosphate synthase small subunit [Mycobacterium gilvum
PYR-GCK]
gi|145216812|gb|ABP46216.1| carbamoyl-phosphate synthase small subunit [Mycobacterium gilvum
PYR-GCK]
Length=387
Score = 620 bits (1600), Expect = 9e-176, Method: Compositional matrix adjust.
Identities = 309/374 (83%), Positives = 333/374 (90%), Gaps = 5/374 (1%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A LVLEDGRVFTG PFGA G+ LGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG
Sbjct 14 ARLVLEDGRVFTGTPFGAEGETLGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 73
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN EDSESRG++IWVAGYAVRDPSPRASNWRATGTL+DEL RQ IVGIAGIDTRAVVRHL
Sbjct 74 WNHEDSESRGDKIWVAGYAVRDPSPRASNWRATGTLDDELKRQGIVGIAGIDTRAVVRHL 133
Query 124 RSRGSMKAGVFS-DGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSR 182
RSRGSMKAG+FS + A A DLIARVR Q +MLGADLAGEVST Y V+ +GP R
Sbjct 134 RSRGSMKAGIFSGEQADASVDDLIARVRDQAAMLGADLAGEVSTDTDYEVDSEGP---QR 190
Query 183 FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHV 242
FTVAALDLGIKTNTPRNFA+RG+R VLP+S TF+ IAEL P GVFLSNGPGDPATADH+
Sbjct 191 FTVAALDLGIKTNTPRNFAKRGVRSIVLPSSATFDHIAELKPDGVFLSNGPGDPATADHI 250
Query 243 VALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQN 302
V +TREVL AGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPV+DH TGRVA+TAQN
Sbjct 251 VGVTREVLDAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVMDHTTGRVAITAQN 310
Query 303 HGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEY 362
HGFAL+GEAGQ+F TPFG A VSHTCANDGVVEGV+L +GRAFSVQYHPEAAAGP DAEY
Sbjct 311 HGFALEGEAGQTFDTPFGQAEVSHTCANDGVVEGVRLSNGRAFSVQYHPEAAAGPRDAEY 370
Query 363 LFDQFVELMAGEGR 376
LFD F++LM EG+
Sbjct 371 LFDTFIDLM-NEGK 383
>gi|126434991|ref|YP_001070682.1| carbamoyl phosphate synthase small subunit [Mycobacterium sp.
JLS]
gi|126234791|gb|ABN98191.1| carbamoyl-phosphate synthase small subunit [Mycobacterium sp.
JLS]
Length=387
Score = 611 bits (1576), Expect = 5e-173, Method: Compositional matrix adjust.
Identities = 300/372 (81%), Positives = 332/372 (90%), Gaps = 4/372 (1%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A+LVLEDGRVFTG P+GA GQ LGEAVFSTGMSGYQETLTDPSY+ QIVVATAPQIGNTG
Sbjct 18 ALLVLEDGRVFTGVPYGAVGQTLGEAVFSTGMSGYQETLTDPSYYGQIVVATAPQIGNTG 77
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN ED+ESR +RIWVAGYAVRDPSPRASNWRATGTL++EL+RQ +VGIAGIDTRA+VRHL
Sbjct 78 WNHEDAESRDDRIWVAGYAVRDPSPRASNWRATGTLDEELVRQGVVGIAGIDTRALVRHL 137
Query 124 RSRGSMKAGVFSDGALAEP-ADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSR 182
R+RG+MKAG+FS A P ++L+ RVR+Q MLGA LA +VST + Y+VEP+G R
Sbjct 138 RTRGAMKAGIFSGDESAAPMSELLERVRSQPGMLGASLADKVSTDDVYIVEPEG---AHR 194
Query 183 FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHV 242
FTVAA+DLGIKTNTPRNFARRGIR HVLPA TFEQIA+L P GVFLSNGPGDPA ADHV
Sbjct 195 FTVAAIDLGIKTNTPRNFARRGIRSHVLPARATFEQIADLKPDGVFLSNGPGDPAVADHV 254
Query 243 VALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQN 302
V +TREVLGAGIPLFGICFGNQILGRALG TYKMVFGHRGIN+PV+DHATGRVA+TAQN
Sbjct 255 VEVTREVLGAGIPLFGICFGNQILGRALGRGTYKMVFGHRGINVPVMDHATGRVAITAQN 314
Query 303 HGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEY 362
HGFAL+GEAG+ F TPFG AVVSHTCANDGVVEGVKLV+GRAFSVQYHPEAAAGPHDA Y
Sbjct 315 HGFALEGEAGERFDTPFGAAVVSHTCANDGVVEGVKLVNGRAFSVQYHPEAAAGPHDANY 374
Query 363 LFDQFVELMAGE 374
LFDQFV+ M+ E
Sbjct 375 LFDQFVDQMSEE 386
>gi|108799333|ref|YP_639530.1| carbamoyl phosphate synthase small subunit [Mycobacterium sp.
MCS]
gi|119868449|ref|YP_938401.1| carbamoyl phosphate synthase small subunit [Mycobacterium sp.
KMS]
gi|108769752|gb|ABG08474.1| carbamoyl-phosphate synthase small subunit [Mycobacterium sp.
MCS]
gi|119694538|gb|ABL91611.1| carbamoyl-phosphate synthase small subunit [Mycobacterium sp.
KMS]
Length=387
Score = 611 bits (1576), Expect = 6e-173, Method: Compositional matrix adjust.
Identities = 300/372 (81%), Positives = 332/372 (90%), Gaps = 4/372 (1%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A+LVLEDGRVFTG P+GA GQ LGEAVFSTGMSGYQETLTDPSY+ QIVVATAPQIGNTG
Sbjct 18 ALLVLEDGRVFTGVPYGAVGQTLGEAVFSTGMSGYQETLTDPSYYGQIVVATAPQIGNTG 77
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN ED+ESR +RIWVAGYAVRDPSPRASNWRATGTL++EL+RQ +VGIAGIDTRA+VRHL
Sbjct 78 WNHEDAESRDDRIWVAGYAVRDPSPRASNWRATGTLDEELVRQGVVGIAGIDTRALVRHL 137
Query 124 RSRGSMKAGVFSDGALAEP-ADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSR 182
R+RG+MKAG+FS A P ++L+ RVR+Q MLGA LA +VST + Y+VEP+G R
Sbjct 138 RTRGAMKAGIFSGDESAAPMSELLERVRSQPGMLGASLADKVSTDDVYIVEPEG---AHR 194
Query 183 FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHV 242
FTVAA+DLGIKTNTPRNFARRGIR HVLPA TFEQIA+L P GVFLSNGPGDPA ADHV
Sbjct 195 FTVAAIDLGIKTNTPRNFARRGIRSHVLPARATFEQIADLKPDGVFLSNGPGDPAAADHV 254
Query 243 VALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQN 302
V +TREVLGAGIPLFGICFGNQILGRALG TYKMVFGHRGIN+PV+DHATGRVA+TAQN
Sbjct 255 VEVTREVLGAGIPLFGICFGNQILGRALGRGTYKMVFGHRGINVPVMDHATGRVAITAQN 314
Query 303 HGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEY 362
HGFAL+GEAG+ F TPFG AVVSHTCANDGVVEGVKLV+GRAFSVQYHPEAAAGPHDA Y
Sbjct 315 HGFALEGEAGERFDTPFGAAVVSHTCANDGVVEGVKLVNGRAFSVQYHPEAAAGPHDANY 374
Query 363 LFDQFVELMAGE 374
LFDQFV+ M+ E
Sbjct 375 LFDQFVDQMSEE 386
>gi|169629912|ref|YP_001703561.1| carbamoyl-phosphate synthase, small chain [Mycobacterium abscessus
ATCC 19977]
gi|169241879|emb|CAM62907.1| Carbamoyl-phosphate synthase, small chain (CarA) [Mycobacterium
abscessus]
Length=391
Score = 584 bits (1505), Expect = 1e-164, Method: Compositional matrix adjust.
Identities = 287/370 (78%), Positives = 315/370 (86%), Gaps = 4/370 (1%)
Query 3 KAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 62
KAVLVLEDGRVFTG+PFGA G+ LGEAVF T MSGYQETLTDPSYHRQIVVATAPQIGNT
Sbjct 15 KAVLVLEDGRVFTGKPFGAVGETLGEAVFCTAMSGYQETLTDPSYHRQIVVATAPQIGNT 74
Query 63 GWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRH 122
GWN ED ESRG +IWVAGYAVRDPS R SNWRA+GTL+D L Q +VGIAGIDTRAVVRH
Sbjct 75 GWNDEDDESRGGKIWVAGYAVRDPSNRVSNWRASGTLDDALKAQHVVGIAGIDTRAVVRH 134
Query 123 LRSRGSMKAGVFSDGALAEPAD-LIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVS 181
LR+RGSMKAG+FS P D L++RV Q +MLGADLAGEVSTA Y VEPDG
Sbjct 135 LRTRGSMKAGIFSGTVADAPTDFLLSRVNGQPAMLGADLAGEVSTASTYTVEPDG---AH 191
Query 182 RFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADH 241
RFTVAALDLGIKTNTPRNFARRGIR V+PAS + +++ L P GVFLSNGPGDPATADH
Sbjct 192 RFTVAALDLGIKTNTPRNFARRGIRVQVVPASISPDELLALAPDGVFLSNGPGDPATADH 251
Query 242 VVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQ 301
VV++TR VL IPLFGICFGNQ+LGRALG STYKM FGHRGINIPV+DH+TGRVA+TAQ
Sbjct 252 VVSVTRAVLDRKIPLFGICFGNQLLGRALGRSTYKMTFGHRGINIPVIDHSTGRVAITAQ 311
Query 302 NHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAE 361
NHGFAL+GEAG+ F TPFG A VSHTCANDG VEG++L+DG AFSVQYHPEAAAGPHDAE
Sbjct 312 NHGFALEGEAGEQFDTPFGRAEVSHTCANDGTVEGIRLLDGSAFSVQYHPEAAAGPHDAE 371
Query 362 YLFDQFVELM 371
YLFDQF +
Sbjct 372 YLFDQFASAL 381
>gi|111024101|ref|YP_707073.1| carbamoyl phosphate synthase small subunit [Rhodococcus jostii
RHA1]
gi|110823631|gb|ABG98915.1| carbamoyl-phosphate synthase small subunit [Rhodococcus jostii
RHA1]
Length=386
Score = 577 bits (1486), Expect = 2e-162, Method: Compositional matrix adjust.
Identities = 284/378 (76%), Positives = 317/378 (84%), Gaps = 9/378 (2%)
Query 3 KAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 62
AVLVLEDGR F G FGA GQ LGEAVFSTGM+GYQETLTDPSYHRQIVVATAPQIGNT
Sbjct 8 SAVLVLEDGRAFRGTTFGAVGQTLGEAVFSTGMTGYQETLTDPSYHRQIVVATAPQIGNT 67
Query 63 GWNGEDSESRG-------ERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGID 115
GWN ED ES G +IWVAGY VRDP+ R S+WRATG+L+DEL++Q +VGIAGID
Sbjct 68 GWNDEDDESVGPTGSSAEAKIWVAGYVVRDPARRTSSWRATGSLQDELVKQGVVGIAGID 127
Query 116 TRAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPD 175
TRA+VRHLR+RGSM+AGVFS ALA+ L+ RV++Q SMLGADLAGEVST YVVEP
Sbjct 128 TRALVRHLRTRGSMRAGVFSGDALADTDVLLDRVKSQPSMLGADLAGEVSTTSGYVVEPT 187
Query 176 GPPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGD 235
G G +RFTVAA+DLGIKTNTPR FA RGIR HVLP++ T EQI +L GVFLSNGPGD
Sbjct 188 G--GDARFTVAAIDLGIKTNTPRMFAERGIRVHVLPSNATLEQILDLKADGVFLSNGPGD 245
Query 236 PATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGR 295
PATAD V LT+EV+G G+PLFGICFGNQILGRALGL TYKM FGHRGINIPVV+H TGR
Sbjct 246 PATADGAVHLTKEVIGQGLPLFGICFGNQILGRALGLGTYKMKFGHRGINIPVVEHETGR 305
Query 296 VAVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAA 355
+A+TAQNHGFAL+GEAGQ F TPFG AV+SHTCANDG VEGV+L+DG AFSVQYHPEAAA
Sbjct 306 IAITAQNHGFALEGEAGQEFDTPFGKAVISHTCANDGAVEGVRLLDGSAFSVQYHPEAAA 365
Query 356 GPHDAEYLFDQFVELMAG 373
GPHDA YLFD+F L+ G
Sbjct 366 GPHDAAYLFDRFTSLLEG 383
>gi|226366341|ref|YP_002784124.1| carbamoyl phosphate synthase small subunit [Rhodococcus opacus
B4]
gi|226244831|dbj|BAH55179.1| carbamoyl-phosphate synthase small chain [Rhodococcus opacus
B4]
Length=386
Score = 575 bits (1483), Expect = 3e-162, Method: Compositional matrix adjust.
Identities = 284/378 (76%), Positives = 315/378 (84%), Gaps = 9/378 (2%)
Query 3 KAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNT 62
AVLVLEDGRVF G FGA GQ LGEAVFSTGM+GYQETLTDPSYHRQIVVATAPQIGNT
Sbjct 8 SAVLVLEDGRVFRGTTFGAVGQTLGEAVFSTGMTGYQETLTDPSYHRQIVVATAPQIGNT 67
Query 63 GWNGEDSESRG-------ERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGID 115
GWN ED ES G +IWVAGY VRDP+ R S+WRATG+L+DEL++Q +VGIAGID
Sbjct 68 GWNDEDDESVGPTGSSAEAKIWVAGYVVRDPARRTSSWRATGSLQDELVKQGVVGIAGID 127
Query 116 TRAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPD 175
TRA+VRHLR+RGSM+AGVFS ALA+ L+ RV+ Q SMLGADLAGEVST Y+VEP
Sbjct 128 TRALVRHLRTRGSMRAGVFSGDALADTDVLLERVKGQPSMLGADLAGEVSTTSGYIVEPT 187
Query 176 GPPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGD 235
G G +RFTVAA+DLGIKTNTPR FA RGIR HVLP+ T QI +L GVFLSNGPGD
Sbjct 188 G--GDARFTVAAIDLGIKTNTPRMFAERGIRVHVLPSDATLAQILDLKADGVFLSNGPGD 245
Query 236 PATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGR 295
PATAD V LT+EV+G G+PLFGICFGNQILGRALGL TYKM FGHRGINIPVV+H TGR
Sbjct 246 PATADGAVHLTKEVIGQGLPLFGICFGNQILGRALGLGTYKMKFGHRGINIPVVEHETGR 305
Query 296 VAVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAA 355
+A+TAQNHGFAL+GEAGQ F TPFG AVVSHTCANDG VEGV+L+DG AFSVQYHPEAAA
Sbjct 306 IAITAQNHGFALEGEAGQEFDTPFGKAVVSHTCANDGAVEGVRLLDGSAFSVQYHPEAAA 365
Query 356 GPHDAEYLFDQFVELMAG 373
GPHDA YLFD+F L+ G
Sbjct 366 GPHDAAYLFDRFTSLLEG 383
>gi|333919525|ref|YP_004493106.1| carbamoyl-phosphate synthase, small subunit [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481746|gb|AEF40306.1| Carbamoyl-phosphate synthase, small subunit [Amycolicicoccus
subflavus DQS3-9A1]
Length=388
Score = 570 bits (1470), Expect = 1e-160, Method: Compositional matrix adjust.
Identities = 275/381 (73%), Positives = 318/381 (84%), Gaps = 13/381 (3%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+S+A LVLEDG+V+ GR FGA G+ GEAVFSTGM+GYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MSEAALVLEDGKVYRGRSFGAVGETFGEAVFSTGMTGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGER----------IWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVG 110
NTGWN +DSES G R IWVAGYA+R+ + R SNWRATG+LEDEL+RQ +VG
Sbjct 61 NTGWNLDDSESFGSRGFETAGPAGKIWVAGYAIREATNRTSNWRATGSLEDELVRQGVVG 120
Query 111 IAGIDTRAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPY 170
+ GIDTRAVVRHLRS GSM+AG+FS A+A PA+L+ RVR Q MLGA LAGEVSTA Y
Sbjct 121 LQGIDTRAVVRHLRSLGSMRAGIFSGDAIAPPAELVDRVRNQPEMLGASLAGEVSTANGY 180
Query 171 VVEPDGPPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLS 230
+EP+G +RFTVAA+DLGIKTNTPR FARRG+R HV+P ++T E + EL+ GVFLS
Sbjct 181 TIEPEGE---ARFTVAAVDLGIKTNTPRMFARRGVRVHVVPGNSTIEDLLELDADGVFLS 237
Query 231 NGPGDPATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVD 290
NGPGDPATAD V LT+ +LG +PLFGICFGNQILGRALGLSTYKM FGHRGINIPV+D
Sbjct 238 NGPGDPATADTAVQLTKAILGQQLPLFGICFGNQILGRALGLSTYKMKFGHRGINIPVID 297
Query 291 HATGRVAVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYH 350
HATG++++TAQNHGFAL+GEAGQ F TPFG AV+SHTCANDG VEGV+L+DG AFSVQYH
Sbjct 298 HATGQISITAQNHGFALEGEAGQEFDTPFGRAVISHTCANDGTVEGVRLLDGSAFSVQYH 357
Query 351 PEAAAGPHDAEYLFDQFVELM 371
PEAAAGPHDA YLFDQF+ +
Sbjct 358 PEAAAGPHDAAYLFDQFISTL 378
>gi|312139568|ref|YP_004006904.1| carbamoyl-phosphate synthase small subunit cara [Rhodococcus
equi 103S]
gi|325672548|ref|ZP_08152244.1| carbamoyl-phosphate synthase, small subunit [Rhodococcus equi
ATCC 33707]
gi|311888907|emb|CBH48220.1| carbamoyl-phosphate synthase small subunit CarA [Rhodococcus
equi 103S]
gi|325556425|gb|EGD26091.1| carbamoyl-phosphate synthase, small subunit [Rhodococcus equi
ATCC 33707]
Length=386
Score = 569 bits (1467), Expect = 3e-160, Method: Compositional matrix adjust.
Identities = 282/379 (75%), Positives = 317/379 (84%), Gaps = 9/379 (2%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
+ AVLVLEDGRVF G FGA GQ LGEAVFSTGM+GYQETLTDPSYHRQIVV+TAPQIGN
Sbjct 7 NTAVLVLEDGRVFRGTTFGAVGQTLGEAVFSTGMTGYQETLTDPSYHRQIVVSTAPQIGN 66
Query 62 TGWNGEDSES-------RGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGI 114
TGWN ED+ES G +IWVAGY VRDPS R S+WRATG+L+DEL RQ +VGIAGI
Sbjct 67 TGWNQEDNESVGPTGESAGSKIWVAGYVVRDPSRRTSSWRATGSLQDELERQGVVGIAGI 126
Query 115 DTRAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEP 174
DTRA+VRHLR+RGSM+AG+FS ALA+ L+ RV+ Q SMLGADLAGEVST YVVEP
Sbjct 127 DTRALVRHLRTRGSMRAGIFSGEALADVDVLLDRVKTQPSMLGADLAGEVSTPNGYVVEP 186
Query 175 DGPPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPG 234
G G +RFTVAA+DLGIKTNTPR FA RG+R HVLP++ T I ++ GVFLSNGPG
Sbjct 187 AG--GEARFTVAAIDLGIKTNTPRMFAERGMRVHVLPSTATLHDILDIGADGVFLSNGPG 244
Query 235 DPATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATG 294
DPATAD V LT+EVLG G+PLFGICFGNQILGRALG+STYKM FGHRGINIPVV+H TG
Sbjct 245 DPATADGAVHLTKEVLGQGLPLFGICFGNQILGRALGMSTYKMKFGHRGINIPVVEHETG 304
Query 295 RVAVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAA 354
R+A+TAQNHGFAL+GEAGQ F TPFG AVVSHTCANDG VEGV+L+DG AFSVQYHPEAA
Sbjct 305 RIAITAQNHGFALEGEAGQEFDTPFGRAVVSHTCANDGAVEGVRLLDGSAFSVQYHPEAA 364
Query 355 AGPHDAEYLFDQFVELMAG 373
AGPHDA YLFD+F ++ G
Sbjct 365 AGPHDAAYLFDRFATMLEG 383
>gi|226306490|ref|YP_002766450.1| carbamoyl-phosphate synthase small chain [Rhodococcus erythropolis
PR4]
gi|226185607|dbj|BAH33711.1| carbamoyl-phosphate synthase small chain [Rhodococcus erythropolis
PR4]
Length=391
Score = 561 bits (1445), Expect = 8e-158, Method: Compositional matrix adjust.
Identities = 279/378 (74%), Positives = 313/378 (83%), Gaps = 9/378 (2%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
S AVLVLEDGRVF G FGA GQ LGEAVFSTGM+GYQETLTDPSYHRQIVV+TAPQIGN
Sbjct 7 SPAVLVLEDGRVFRGTTFGAVGQTLGEAVFSTGMTGYQETLTDPSYHRQIVVSTAPQIGN 66
Query 62 TGWNGEDSES-------RGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGI 114
TGWN ED ES G +IWVAGY VRDPS S+WRATG+L+ +L Q IVGIAGI
Sbjct 67 TGWNDEDDESVGPTGESAGAKIWVAGYVVRDPSRVTSSWRATGSLQAKLEEQGIVGIAGI 126
Query 115 DTRAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEP 174
DTRA+VRHLR+RGSMKAGVFS A+A +L+ RV+ Q +MLGADLAGEVST YVVEP
Sbjct 127 DTRALVRHLRTRGSMKAGVFSGDAIAADDELVRRVQDQPTMLGADLAGEVSTTSGYVVEP 186
Query 175 DGPPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPG 234
G G + +TVAA+DLGIKTNTPR FA RGIR HVLP++ + EQI +L GVFLSNGPG
Sbjct 187 KG--GEALYTVAAIDLGIKTNTPRMFAERGIRVHVLPSNASLEQILDLKADGVFLSNGPG 244
Query 235 DPATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATG 294
DPATAD V LT+EV+G G+PLFGICFGNQILGRALGLSTYKM FGHRGINIPV++H TG
Sbjct 245 DPATADGAVHLTKEVIGQGLPLFGICFGNQILGRALGLSTYKMKFGHRGINIPVIEHQTG 304
Query 295 RVAVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAA 354
R+A+TAQNHGFAL+GEAGQ F TPFG AVVSHTCANDG VEGV+L+D AFSVQYHPEAA
Sbjct 305 RIAITAQNHGFALEGEAGQEFDTPFGRAVVSHTCANDGAVEGVRLLDDSAFSVQYHPEAA 364
Query 355 AGPHDAEYLFDQFVELMA 372
AGPHDA YLFD+F L++
Sbjct 365 AGPHDAAYLFDRFTSLLS 382
>gi|229493591|ref|ZP_04387376.1| carbamoyl-phosphate synthase, small subunit [Rhodococcus erythropolis
SK121]
gi|229319552|gb|EEN85388.1| carbamoyl-phosphate synthase, small subunit [Rhodococcus erythropolis
SK121]
Length=391
Score = 560 bits (1444), Expect = 1e-157, Method: Compositional matrix adjust.
Identities = 279/378 (74%), Positives = 313/378 (83%), Gaps = 9/378 (2%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
S AVLVLEDGRVF G FGA GQ LGEAVFSTGM+GYQETLTDPSYHRQIVV+TAPQIGN
Sbjct 7 SPAVLVLEDGRVFRGTTFGAVGQTLGEAVFSTGMTGYQETLTDPSYHRQIVVSTAPQIGN 66
Query 62 TGWNGEDSES-------RGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGI 114
TGWN ED ES G +IWVAGY VRDPS S+WRATG+L+ +L Q IVGIAGI
Sbjct 67 TGWNDEDDESVGPTGESAGAKIWVAGYVVRDPSRVTSSWRATGSLQAKLEEQGIVGIAGI 126
Query 115 DTRAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEP 174
DTRA+VRHLR+RGSMKAGVFS A+A +L+ RV+ Q +MLGADLAGEVST YVVEP
Sbjct 127 DTRALVRHLRTRGSMKAGVFSGEAIAADDELVRRVQDQPTMLGADLAGEVSTTSGYVVEP 186
Query 175 DGPPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPG 234
G G + +TVAA+DLGIKTNTPR FA RGIR HVLP++ + EQI +L GVFLSNGPG
Sbjct 187 KG--GEALYTVAAIDLGIKTNTPRMFAERGIRVHVLPSNASLEQILDLKADGVFLSNGPG 244
Query 235 DPATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATG 294
DPATAD V LT+EV+G G+PLFGICFGNQILGRALGLSTYKM FGHRGINIPV++H TG
Sbjct 245 DPATADGAVHLTKEVIGQGLPLFGICFGNQILGRALGLSTYKMKFGHRGINIPVIEHQTG 304
Query 295 RVAVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAA 354
R+A+TAQNHGFAL+GEAGQ F TPFG AVVSHTCANDG VEGV+L+D AFSVQYHPEAA
Sbjct 305 RIAITAQNHGFALEGEAGQEFDTPFGRAVVSHTCANDGAVEGVRLLDDSAFSVQYHPEAA 364
Query 355 AGPHDAEYLFDQFVELMA 372
AGPHDA YLFD+F L++
Sbjct 365 AGPHDAAYLFDRFTSLLS 382
>gi|262202267|ref|YP_003273475.1| carbamoyl-phosphate synthase small subunit [Gordonia bronchialis
DSM 43247]
gi|262085614|gb|ACY21582.1| carbamoyl-phosphate synthase, small subunit [Gordonia bronchialis
DSM 43247]
Length=378
Score = 557 bits (1436), Expect = 9e-157, Method: Compositional matrix adjust.
Identities = 274/374 (74%), Positives = 311/374 (84%), Gaps = 3/374 (0%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
++ AVLVLE+G+VFTGRPFGA G+ LGEAVF T M+GYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MNTAVLVLENGQVFTGRPFGAVGETLGEAVFCTAMTGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVV 120
NTGWN ED ES G +IWVAGYAVR+P+ R SNWRA+ +LEDEL+RQ IVGIAGIDTRA V
Sbjct 61 NTGWNTEDDESHGGKIWVAGYAVRNPTRRVSNWRASTSLEDELVRQGIVGIAGIDTRAAV 120
Query 121 RHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
R LR GSM+AGVFS AL++ +L++RVR+Q SM GADLAGEV+T Y VEP+G
Sbjct 121 RTLRDHGSMRAGVFSGEALSDTDELLSRVRSQPSMKGADLAGEVTTDTGYTVEPEGE--- 177
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
RFTVAA+DLGIKTNTPR FA+RG+R HVLPA I LNP GVFLSNGPGDPATA+
Sbjct 178 VRFTVAAIDLGIKTNTPRMFAQRGVRVHVLPAVADLATITALNPDGVFLSNGPGDPATAE 237
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
V LTREVLGA +PLFGICFGNQILGRALG TYKM FGHRGINIPV+D ATG V++TA
Sbjct 238 APVNLTREVLGADLPLFGICFGNQILGRALGRGTYKMTFGHRGINIPVIDAATGTVSITA 297
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFAL+GEAG+ F T FG A VSH CANDG VEGV+L+ GRAFSVQYHPEAAAGPHDA
Sbjct 298 QNHGFALEGEAGEEFDTDFGRARVSHVCANDGTVEGVELLSGRAFSVQYHPEAAAGPHDA 357
Query 361 EYLFDQFVELMAGE 374
YLFD+F+ L+ G+
Sbjct 358 AYLFDKFITLLEGD 371
>gi|54025590|ref|YP_119832.1| carbamoyl phosphate synthase small subunit [Nocardia farcinica
IFM 10152]
gi|54017098|dbj|BAD58468.1| putative carbamoyl-phosphate synthase small subunit [Nocardia
farcinica IFM 10152]
Length=372
Score = 551 bits (1419), Expect = 8e-155, Method: Compositional matrix adjust.
Identities = 272/372 (74%), Positives = 307/372 (83%), Gaps = 5/372 (1%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
+ A LVLEDGRVF G +GA GQ LGEAVF T M+GYQETLTDPSYHRQIVVATAPQIGN
Sbjct 5 TAAALVLEDGRVFRGTAYGAVGQTLGEAVFCTAMTGYQETLTDPSYHRQIVVATAPQIGN 64
Query 62 TGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVR 121
TGWN ED ES +RIWVAGYAVRDP+ R SNWRAT +L DEL RQ IVGIAGIDTRA+VR
Sbjct 65 TGWNDEDDES--QRIWVAGYAVRDPARRVSNWRATRSLPDELDRQGIVGIAGIDTRALVR 122
Query 122 HLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVS 181
HLR+RGSMKAG+FS ALA+ +L+ARV Q SMLGADLA EVST Y +EP G
Sbjct 123 HLRTRGSMKAGIFSGAALADAEELLARVTGQPSMLGADLAEEVSTDGVYTIEPTGD---H 179
Query 182 RFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADH 241
RFTV A+DLGIKTNTPR FA+RGIR HV+P++T+ +Q+ EL P GVFLSNGPGDPAT +
Sbjct 180 RFTVVAVDLGIKTNTPRMFAQRGIRVHVVPSTTSLDQVLELKPDGVFLSNGPGDPATQND 239
Query 242 VVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQ 301
VA+T+ VL G+PLFGICFGNQILGRALG TYKM FGHRGINIPVV+H TGR+++TAQ
Sbjct 240 AVAITQGVLERGVPLFGICFGNQILGRALGRETYKMKFGHRGINIPVVEHETGRISITAQ 299
Query 302 NHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAE 361
NHGFAL+GE G+ F TPFG A +SH CANDG VEGV+L+DGRAFSVQYHPEAAAGPHDA
Sbjct 300 NHGFALEGERGEQFDTPFGRAEISHVCANDGTVEGVRLLDGRAFSVQYHPEAAAGPHDAA 359
Query 362 YLFDQFVELMAG 373
YLFD+F LM G
Sbjct 360 YLFDRFAGLMEG 371
>gi|343924551|ref|ZP_08764099.1| carbamoyl-phosphate synthase small chain [Gordonia alkanivorans
NBRC 16433]
gi|343765486|dbj|GAA11025.1| carbamoyl-phosphate synthase small chain [Gordonia alkanivorans
NBRC 16433]
Length=389
Score = 542 bits (1397), Expect = 3e-152, Method: Compositional matrix adjust.
Identities = 270/385 (71%), Positives = 308/385 (80%), Gaps = 14/385 (3%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
++ AVLVLE+G+VFTGR FGA G+ LGEAVF T M+GYQETLTDPSYHRQIVVATAPQIG
Sbjct 1 MNTAVLVLENGQVFTGRSFGAVGETLGEAVFCTAMTGYQETLTDPSYHRQIVVATAPQIG 60
Query 61 NTGWNGEDSESRGE-----------RIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIV 109
NTGWN ED ES G +IWVAGYAVR+P+ R SNWRAT +LEDEL++Q IV
Sbjct 61 NTGWNTEDGESTGSAGSTGVDGDSGKIWVAGYAVRNPTRRVSNWRATTSLEDELVKQGIV 120
Query 110 GIAGIDTRAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEP 169
GI GIDTR VVR LR GSMKAG+FS ALA+ +L+ RVR Q M GA LA EV+T +
Sbjct 121 GIGGIDTRTVVRILRDHGSMKAGIFSGPALADTDELVGRVRNQPDMKGAKLADEVTTTDG 180
Query 170 YVVEPDGPPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFL 229
Y+VEP G RFTVAA+DLGIKTNTPR FA RG+R HVLPA+ + IA+L P GVFL
Sbjct 181 YIVEP---VGQHRFTVAAIDLGIKTNTPRMFAERGVRTHVLPANVALDAIADLKPDGVFL 237
Query 230 SNGPGDPATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVV 289
SNGPGDPATAD VV LTR VLG +PLFGICFGNQILGRALG STYKM FGHRGINIPVV
Sbjct 238 SNGPGDPATADDVVELTRGVLGRDLPLFGICFGNQILGRALGRSTYKMKFGHRGINIPVV 297
Query 290 DHATGRVAVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQY 349
DHATG+V++T+QNHGFAL+GEAG+ F + FG A VSH CANDG VEG++L+ GRAFSVQY
Sbjct 298 DHATGKVSITSQNHGFALEGEAGEEFDSDFGRARVSHVCANDGTVEGLELLSGRAFSVQY 357
Query 350 HPEAAAGPHDAEYLFDQFVELMAGE 374
HPEAAAGPHDA LFD+FV L+ G+
Sbjct 358 HPEAAAGPHDAANLFDKFVTLLEGD 382
>gi|296140281|ref|YP_003647524.1| carbamoyl-phosphate synthase, small subunit [Tsukamurella paurometabola
DSM 20162]
gi|296028415|gb|ADG79185.1| carbamoyl-phosphate synthase, small subunit [Tsukamurella paurometabola
DSM 20162]
Length=378
Score = 538 bits (1385), Expect = 8e-151, Method: Compositional matrix adjust.
Identities = 262/368 (72%), Positives = 300/368 (82%), Gaps = 3/368 (0%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A+LVLEDG V G FGA GQ LGEAVF T M+GYQETLTDPSY RQIVVATAPQIGNTG
Sbjct 11 ALLVLEDGTVHRGVEFGAVGQTLGEAVFCTAMTGYQETLTDPSYDRQIVVATAPQIGNTG 70
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN ED ESRG++IWVAGYAVR+P+ R SNWRA+GTLE EL+ Q +VGI GIDTRAVVR L
Sbjct 71 WNDEDDESRGDKIWVAGYAVRNPTRRVSNWRASGTLEGELVDQGVVGIGGIDTRAVVRRL 130
Query 124 RSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRF 183
R GSM+AGVFS ALA A+L+ RVRAQ SM G +L GEVST E Y VEP+G +R+
Sbjct 131 RDHGSMRAGVFSGEALAPEAELLDRVRAQPSMKGQNLIGEVSTTETYTVEPNGE---ARY 187
Query 184 TVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHVV 243
TV A+DLGIKTNTPR FA RG+R HV+P++ T +++ L P G FLSNGPGDP+TA+H V
Sbjct 188 TVVAVDLGIKTNTPRMFAERGMRVHVVPSTITLDEVKSLKPDGFFLSNGPGDPSTAEHEV 247
Query 244 ALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQNH 303
LTR VL +G+PLFGIC GNQ+LGRA GL TYKM FGHRGINIPVV+H TGR+++TAQNH
Sbjct 248 ELTRGVLDSGLPLFGICLGNQLLGRAFGLDTYKMKFGHRGINIPVVEHTTGRISITAQNH 307
Query 304 GFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEYL 363
GFAL+GE GQ F TPFG A VSH CAND VEGV+L+DGRAFSVQYHPEAAAGPHDA YL
Sbjct 308 GFALEGERGQEFDTPFGRARVSHVCANDETVEGVELLDGRAFSVQYHPEAAAGPHDAAYL 367
Query 364 FDQFVELM 371
FD+F +M
Sbjct 368 FDRFATIM 375
>gi|38233918|ref|NP_939685.1| carbamoyl phosphate synthase small subunit [Corynebacterium diphtheriae
NCTC 13129]
gi|60389660|sp|Q6NH15.1|CARA_CORDI RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|38200179|emb|CAE49860.1| carbamoyl-phosphate synthase small chain [Corynebacterium diphtheriae]
Length=379
Score = 523 bits (1346), Expect = 2e-146, Method: Compositional matrix adjust.
Identities = 254/376 (68%), Positives = 299/376 (80%), Gaps = 4/376 (1%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
S+AVLVL DGR+F G FGA G LGEAVF+T MSGYQET+TDPSYHRQIVVATAPQIGN
Sbjct 7 SEAVLVLADGRIFKGESFGAEGATLGEAVFTTAMSGYQETMTDPSYHRQIVVATAPQIGN 66
Query 62 TGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVR 121
TGWN ED ES G++IWVAG +RD S SNWRA +LEDE+ Q IVGI+G+DTRA+VR
Sbjct 67 TGWNDEDGESHGDKIWVAGLVIRDLSTAVSNWRAKRSLEDEMREQNIVGISGVDTRAIVR 126
Query 122 HLRSRGSMKAGVFSDGALAEPAD-LIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
HLR+ GS+ AG+FS A +P D LI V++Q SM GADLA EVST E YVVEPDG
Sbjct 127 HLRNFGSVAAGIFSGEAAKQPHDELIEIVKSQPSMAGADLASEVSTQEAYVVEPDGE--- 183
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
+ +TV A D+GIKTNTPRNF+RRGIR V+PA+T E IA+ NP GVF+SNGPGDPATAD
Sbjct 184 ALYTVVAYDMGIKTNTPRNFSRRGIRTVVVPANTPAEDIAQYNPDGVFVSNGPGDPATAD 243
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
+V + +E+L IP FGICFGNQILGRALG++TYKM FGHRGIN+PV++H TG++ +TA
Sbjct 244 VMVGIVQEILAQKIPFFGICFGNQILGRALGMNTYKMKFGHRGINVPVLNHLTGKIDITA 303
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFAL+G A + F TPFGPA V+HTC ND VEGV LV+G A+SVQYHPEAAAGPHDA
Sbjct 304 QNHGFALEGTALEQFDTPFGPAHVTHTCLNDDTVEGVALVNGLAYSVQYHPEAAAGPHDA 363
Query 361 EYLFDQFVELMAGEGR 376
LFDQFVEL+ +
Sbjct 364 NPLFDQFVELIQANKK 379
>gi|300858549|ref|YP_003783532.1| carbamoyl-phosphate synthase small chain [Corynebacterium pseudotuberculosis
FRC41]
gi|300686003|gb|ADK28925.1| carbamoyl-phosphate synthase small chain [Corynebacterium pseudotuberculosis
FRC41]
gi|302206262|gb|ADL10604.1| Carbamoyl-phosphate synthase small chain [Corynebacterium pseudotuberculosis
C231]
gi|302330820|gb|ADL21014.1| Carbamoyl-phosphate synthase small chain [Corynebacterium pseudotuberculosis
1002]
gi|308276504|gb|ADO26403.1| Carbamoyl-phosphate synthase small chain [Corynebacterium pseudotuberculosis
I19]
gi|341824944|gb|AEK92465.1| Carbamoyl-phosphate synthase small chain [Corynebacterium pseudotuberculosis
PAT10]
Length=410
Score = 521 bits (1342), Expect = 8e-146, Method: Compositional matrix adjust.
Identities = 250/372 (68%), Positives = 302/372 (82%), Gaps = 4/372 (1%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
S+AVLVL DGR+F G+ FGA G LGEAVF+T M+GYQET+TDPSYHRQIVV+ AP IGN
Sbjct 33 SEAVLVLADGRIFKGQSFGALGTTLGEAVFTTAMTGYQETMTDPSYHRQIVVSAAPHIGN 92
Query 62 TGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVR 121
TGWN EDSES GE+IW+AG +RD S R SNWRA+ +LE+E+ Q IVGI+G+DTR +VR
Sbjct 93 TGWNDEDSESYGEKIWIAGLVIRDLSHRVSNWRASRSLEEEMQAQNIVGISGLDTRTIVR 152
Query 122 HLRSRGSMKAGVFS-DGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
HLR+ GS+ AG+FS + A P +L+ V+ Q SM GADLAGEVST PYVVE +G
Sbjct 153 HLRNFGSISAGIFSGEDATRNPQELVDIVKGQPSMAGADLAGEVSTDTPYVVEAEGE--- 209
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
++FTV A D+GIKTNTPRNFA RGIR V+PA+T +++I E NP GVF+SNGPGDPATAD
Sbjct 210 AKFTVVAYDMGIKTNTPRNFAARGIRTIVVPANTPYQKIVEYNPDGVFISNGPGDPATAD 269
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
+V + ++VL IPLFGICFGNQILGRALGL+TYKM FGHRGIN+PV++H TG++ +TA
Sbjct 270 VMVGIIQKVLEHKIPLFGICFGNQILGRALGLNTYKMKFGHRGINVPVLNHLTGKIDITA 329
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFAL+G+AG+ F TPFG A V+HTC ND VEGV LV+G A+SVQYHPEAAAGPHDA
Sbjct 330 QNHGFALEGKAGEIFETPFGDAHVTHTCLNDDTVEGVALVNGLAYSVQYHPEAAAGPHDA 389
Query 361 EYLFDQFVELMA 372
LFDQFVELM+
Sbjct 390 NPLFDQFVELMS 401
>gi|337290853|ref|YP_004629874.1| carbamoyl-phosphate synthase small chain [Corynebacterium ulcerans
BR-AD22]
gi|334699159|gb|AEG83955.1| carbamoyl-phosphate synthase small chain [Corynebacterium ulcerans
BR-AD22]
Length=410
Score = 520 bits (1339), Expect = 1e-145, Method: Compositional matrix adjust.
Identities = 251/372 (68%), Positives = 301/372 (81%), Gaps = 4/372 (1%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
S+AVLVL DGR+F G+ FGA G LGEAVF+T M+GYQET+TDPSYHRQIVV+ AP IGN
Sbjct 33 SEAVLVLADGRIFRGQSFGALGTTLGEAVFTTAMTGYQETMTDPSYHRQIVVSAAPHIGN 92
Query 62 TGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVR 121
TGWN EDSES GE+IWVAG A+RD S R SNWRA+ +LE+E+ Q IVGI+G+DTR +VR
Sbjct 93 TGWNDEDSESYGEKIWVAGLAIRDLSHRVSNWRASRSLEEEMQAQNIVGISGLDTRTIVR 152
Query 122 HLRSRGSMKAGVFS-DGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
HLR+ GS+ AG+FS + A P +L+ V+ Q SM GADLAGEVST PYVVE +G
Sbjct 153 HLRNFGSISAGIFSGEDAARSPEELVEIVKGQPSMAGADLAGEVSTDAPYVVEAEGE--- 209
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
+ FTV A D+GIKTNTPRNFA RGIR V+PA+T +++I NP GVF+SNGPGDPATAD
Sbjct 210 TTFTVVAYDMGIKTNTPRNFAARGIRTIVVPANTPYQEIEGYNPDGVFISNGPGDPATAD 269
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
+V + +E+L IPLFGICFGNQILGRALGL TYKM FGHRGIN+PV++H TG++ +TA
Sbjct 270 VMVGIVQEILERKIPLFGICFGNQILGRALGLKTYKMKFGHRGINVPVLNHLTGKIDITA 329
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFAL+G+AG++F TPFG A V+HTC ND VEGV LV+G A+SVQYHPEAAAGPHDA
Sbjct 330 QNHGFALEGKAGETFETPFGDAHVTHTCLNDDTVEGVALVNGLAYSVQYHPEAAAGPHDA 389
Query 361 EYLFDQFVELMA 372
LFDQFVELM+
Sbjct 390 NPLFDQFVELMS 401
>gi|305680880|ref|ZP_07403687.1| carbamoyl-phosphate synthase, small subunit [Corynebacterium
matruchotii ATCC 14266]
gi|305659085|gb|EFM48585.1| carbamoyl-phosphate synthase, small subunit [Corynebacterium
matruchotii ATCC 14266]
Length=379
Score = 520 bits (1339), Expect = 1e-145, Method: Compositional matrix adjust.
Identities = 250/372 (68%), Positives = 296/372 (80%), Gaps = 4/372 (1%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
+ A LVL DG+VFTG FGATG LGEAVF+T M+GYQET+TDPSYHRQIVVATAPQIGN
Sbjct 6 TTARLVLADGKVFTGTSFGATGTTLGEAVFTTAMTGYQETMTDPSYHRQIVVATAPQIGN 65
Query 62 TGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVR 121
TGWN ED ESRG RIWVAG +RD S + S+WRAT +LEDE+I Q I+GIAG+DTR +VR
Sbjct 66 TGWNDEDDESRGSRIWVAGLVIRDLSAQVSSWRATRSLEDEMIAQNIIGIAGVDTRTIVR 125
Query 122 HLRSRGSMKAGVFSDGALAEPAD-LIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
HLR+ GS+ AG+FS A +P + LI VR+Q +M G DLA +VST EPY+VEP G
Sbjct 126 HLRNFGSISAGIFSGEAADQPVEKLIETVRSQPAMAGLDLAEQVSTTEPYIVEPIGE--- 182
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
+FTV A D+GIKTNTPRNFA RGIR ++PA+T + IA NP GVF+SNGPGDPATAD
Sbjct 183 HKFTVIAYDMGIKTNTPRNFAHRGIRTIIVPANTPYADIAAYNPDGVFVSNGPGDPATAD 242
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
+V + R++L A IP FGICFGNQILGRALGL+TYKM FGHRGIN+PV++H TG + +T+
Sbjct 243 TMVGIVRDILAAKIPFFGICFGNQILGRALGLNTYKMKFGHRGINVPVLNHLTGTIDITS 302
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFAL+G AG +F TP+G A V+HTC NDG VEGV L G A+SVQYHPE+AAGPHDA
Sbjct 303 QNHGFALEGTAGTTFTTPYGDAQVTHTCLNDGTVEGVALTSGLAYSVQYHPESAAGPHDA 362
Query 361 EYLFDQFVELMA 372
LFDQFV LMA
Sbjct 363 NPLFDQFVTLMA 374
>gi|296394709|ref|YP_003659593.1| carbamoyl-phosphate synthase small subunit [Segniliparus rotundus
DSM 44985]
gi|296181856|gb|ADG98762.1| carbamoyl-phosphate synthase, small subunit [Segniliparus rotundus
DSM 44985]
Length=376
Score = 520 bits (1339), Expect = 2e-145, Method: Compositional matrix adjust.
Identities = 260/375 (70%), Positives = 295/375 (79%), Gaps = 8/375 (2%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
+ AVLVLEDG VFTG FGATGQ LGEAVF T M+GYQETLTDPSY RQIVVA APQIGN
Sbjct 3 NTAVLVLEDGTVFTGEQFGATGQTLGEAVFCTAMTGYQETLTDPSYRRQIVVAAAPQIGN 62
Query 62 TGWNGEDSESRG-----ERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDT 116
TGWN EDSES +RIW AGYA+RD + +ASNWRA G LEDEL Q IVG+ G+DT
Sbjct 63 TGWNNEDSESYRPDEARDRIWAAGYAIRDLARQASNWRAEGGLEDELRSQGIVGVKGVDT 122
Query 117 RAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDG 176
R +VR LR GSMKAG+FS AL + + + VR+Q SM GADL GEV+T + YVVEPDG
Sbjct 123 RTLVRKLRDVGSMKAGIFSGDALTDRDEAVGVVRSQPSMAGADLVGEVTTPQAYVVEPDG 182
Query 177 PPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDP 236
+RF++AALDLGIKT TP+ A+RG+R HVLPA T++ QI EL G+F SNGPGDP
Sbjct 183 ---AARFSIAALDLGIKTMTPKLLAQRGVRVHVLPAGTSYAQIKELGVDGLFASNGPGDP 239
Query 237 ATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRV 296
+TA VV RE LG G+P FGIC GNQ+LGRA GLSTYKM FGHRGINIPV++HATGR
Sbjct 240 STAVGVVETLREALGDGVPFFGICLGNQLLGRAFGLSTYKMKFGHRGINIPVIEHATGRA 299
Query 297 AVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAG 356
+TAQNHGFAL+GEAGQ F TPFG AVV+HTCANDG VEGV L +GRAFSVQYHPEAAAG
Sbjct 300 IITAQNHGFALEGEAGQRFDTPFGEAVVTHTCANDGTVEGVALANGRAFSVQYHPEAAAG 359
Query 357 PHDAEYLFDQFVELM 371
PHDA FDQFVEL+
Sbjct 360 PHDAGNHFDQFVELL 374
>gi|334696967|gb|AEG81764.1| carbamoyl-phosphate synthase small chain [Corynebacterium ulcerans
809]
Length=410
Score = 517 bits (1332), Expect = 1e-144, Method: Compositional matrix adjust.
Identities = 250/372 (68%), Positives = 300/372 (81%), Gaps = 4/372 (1%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
S+AVLVL DGR+F G+ FGA G LGEAVF+T M+GYQET+TDPSYHRQIVV+ AP IGN
Sbjct 33 SEAVLVLADGRIFRGQSFGALGTTLGEAVFTTAMTGYQETMTDPSYHRQIVVSAAPHIGN 92
Query 62 TGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVR 121
TGWN EDSES GE+IWVAG A+RD S R SNWRA+ +LE+E+ Q IVGI+G+DTR +VR
Sbjct 93 TGWNDEDSESYGEKIWVAGLAIRDLSHRVSNWRASRSLEEEMQAQNIVGISGLDTRTIVR 152
Query 122 HLRSRGSMKAGVFS-DGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
HLR+ GS+ AG+FS + A P +L+ V+ Q SM GADLAGEVST PYVVE +G
Sbjct 153 HLRNFGSISAGIFSGEDAARSPEELVEIVKGQPSMAGADLAGEVSTDAPYVVEAEGE--- 209
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
+ FTV A D+GIKTNTPRNFA RGIR V+PA+T +++I NP GVF+SNGPGDPATAD
Sbjct 210 TTFTVVAYDMGIKTNTPRNFAARGIRTIVVPANTPYQEIEGYNPDGVFISNGPGDPATAD 269
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
+V + +E+L IPLFGICFGNQI+GRALGL TYKM FGHRGIN+PV++H TG++ +TA
Sbjct 270 VMVGIVQEILERKIPLFGICFGNQIIGRALGLKTYKMKFGHRGINVPVLNHLTGKIDITA 329
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFAL+G+AG+ F TPFG A V+HTC ND VEGV LV+G A+SVQYHPEAAAGPHDA
Sbjct 330 QNHGFALEGKAGEIFETPFGDAHVTHTCLNDDTVEGVALVNGLAYSVQYHPEAAAGPHDA 389
Query 361 EYLFDQFVELMA 372
LFDQFVELM+
Sbjct 390 NPLFDQFVELMS 401
>gi|336325658|ref|YP_004605624.1| carbamoyl phosphate synthase small subunit [Corynebacterium resistens
DSM 45100]
gi|336101640|gb|AEI09460.1| carbamoyl phosphate synthase small subunit [Corynebacterium resistens
DSM 45100]
Length=378
Score = 515 bits (1327), Expect = 4e-144, Method: Compositional matrix adjust.
Identities = 245/373 (66%), Positives = 297/373 (80%), Gaps = 8/373 (2%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A LVL DGR+F GR FGA G LGEAVF+T M+GYQET+TDPSYHRQIVVATAPQIGNTG
Sbjct 6 AALVLADGRIFRGRAFGAQGTTLGEAVFTTAMTGYQETMTDPSYHRQIVVATAPQIGNTG 65
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN ED ESR ++IWVAG +RD S SNWRA +LE+E+ Q ++GI G+DTRA+VRHL
Sbjct 66 WNDEDGESRDDKIWVAGLVIRDLSHTVSNWRANRSLEEEMAAQNVIGIKGVDTRAIVRHL 125
Query 124 RSRGSMKAGVFS-DGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSR 182
R +GS+ AG+FS D ALA D+I++V+AQ+SM GADLAG+VST E Y+VEPDG P R
Sbjct 126 RDKGSVAAGIFSGDAALASDEDMISQVKAQESMEGADLAGDVSTDEVYIVEPDGEP---R 182
Query 183 FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPH----GVFLSNGPGDPAT 238
+TV A D+GIKTNTPR F++RG+R V+P T FE++ EL GVF+SNGPGDPAT
Sbjct 183 YTVIAYDMGIKTNTPREFSKRGVRTVVVPHDTKFERVQELMTEHCATGVFVSNGPGDPAT 242
Query 239 ADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAV 298
AD VA ++VL A IP FGICFGNQILGRALG+ TYK+ FGHRG+N+PV++H TGR+ +
Sbjct 243 ADATVAEVKKVLEAKIPFFGICFGNQILGRALGMETYKLKFGHRGVNVPVINHVTGRIDI 302
Query 299 TAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPH 358
TAQNHGFAL+G+ G+ F TP+G A V+HTC ND VVEGV L+DG AFSVQYHPE+AAGPH
Sbjct 303 TAQNHGFALRGKPGEKFDTPYGEAQVTHTCLNDDVVEGVALLDGSAFSVQYHPESAAGPH 362
Query 359 DAEYLFDQFVELM 371
DA LFDQF E++
Sbjct 363 DANPLFDQFFEML 375
>gi|225021353|ref|ZP_03710545.1| hypothetical protein CORMATOL_01372 [Corynebacterium matruchotii
ATCC 33806]
gi|224945735|gb|EEG26944.1| hypothetical protein CORMATOL_01372 [Corynebacterium matruchotii
ATCC 33806]
Length=369
Score = 515 bits (1326), Expect = 5e-144, Method: Compositional matrix adjust.
Identities = 248/367 (68%), Positives = 292/367 (80%), Gaps = 4/367 (1%)
Query 7 VLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTGWNG 66
+L DG+VFTG FGATG LGEAVF+T M+GYQET+TDPSYHRQIVVATAPQIGNTGWN
Sbjct 1 MLADGKVFTGTSFGATGTTLGEAVFTTAMTGYQETMTDPSYHRQIVVATAPQIGNTGWND 60
Query 67 EDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHLRSR 126
ED ESRG RIWVAG +RD S + S+WRAT +LEDE+I Q I+GIAG+DTR +VRHLR+
Sbjct 61 EDDESRGSRIWVAGLVIRDLSAQVSSWRATRSLEDEMIAQNIIGIAGVDTRTIVRHLRNF 120
Query 127 GSMKAGVFSDGALAEPAD-LIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRFTV 185
GS+ AG+FS A +P + LI VR+Q +M G DLA +VST EPY+VEP G +FTV
Sbjct 121 GSISAGIFSGEAADQPVEKLIDIVRSQPAMAGLDLAEQVSTTEPYIVEPIGE---HKFTV 177
Query 186 AALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHVVAL 245
A D+GIKTNTPRNFA RGIR V+PA+T + IA NP GVF+SNGPGDPATAD +V +
Sbjct 178 VAYDMGIKTNTPRNFAHRGIRTIVVPANTPYADIAAYNPDGVFVSNGPGDPATADTMVGI 237
Query 246 TREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQNHGF 305
R++L A IP FGICFGNQILGRALGL TYKM FGHRGIN+PV++H TG + +T+QNHGF
Sbjct 238 VRDILAAKIPFFGICFGNQILGRALGLGTYKMKFGHRGINVPVLNHLTGTIDITSQNHGF 297
Query 306 ALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEYLFD 365
AL+G AG +F TP+G A V+HTC NDG VEGV L G A+SVQYHPE+AAGPHDA LFD
Sbjct 298 ALEGTAGTTFTTPYGDAQVTHTCLNDGTVEGVALTSGLAYSVQYHPESAAGPHDANPLFD 357
Query 366 QFVELMA 372
QFV LMA
Sbjct 358 QFVTLMA 364
>gi|317505981|ref|ZP_07963813.1| carbamoyl-phosphate synthase [Segniliparus rugosus ATCC BAA-974]
gi|316255757|gb|EFV14995.1| carbamoyl-phosphate synthase [Segniliparus rugosus ATCC BAA-974]
Length=377
Score = 514 bits (1323), Expect = 1e-143, Method: Compositional matrix adjust.
Identities = 259/375 (70%), Positives = 295/375 (79%), Gaps = 8/375 (2%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
+ AVLVLEDG VF G FGA GQ LGEAVF T M+GYQETLTDPSY RQIVVA APQIGN
Sbjct 3 NTAVLVLEDGTVFPGERFGAAGQTLGEAVFCTAMTGYQETLTDPSYRRQIVVAAAPQIGN 62
Query 62 TGWNGEDSES-----RGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDT 116
TGWN EDSES +RIWVAGYA+RD + +ASNWRA G LEDEL Q IVGI G+DT
Sbjct 63 TGWNNEDSESYRPDQTRDRIWVAGYAIRDLARKASNWRADGGLEDELSSQGIVGIKGVDT 122
Query 117 RAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDG 176
R VVR LR+ GSMKAG+FS G L ++ +A VR Q M GADL GEV+T + YVVEP+G
Sbjct 123 RTVVRKLRNVGSMKAGIFSGGDLPAASEAVAIVREQPPMAGADLVGEVTTPQSYVVEPEG 182
Query 177 PPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDP 236
+RF++AALDLGIKT TPR FA+RG+R HV+PAST++ QI +L G+F SNGPGDP
Sbjct 183 E---ARFSIAALDLGIKTMTPRLFAQRGVRVHVVPASTSYAQIKQLGVSGLFASNGPGDP 239
Query 237 ATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRV 296
ATA VV RE LG G+P FGIC GNQ+LGRA GLSTYKM FGHRGINIPV++HATGR
Sbjct 240 ATAVGVVETLREALGDGLPFFGICLGNQLLGRAFGLSTYKMKFGHRGINIPVIEHATGRA 299
Query 297 AVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAG 356
+TAQNHGFAL+GEAGQ F TPFG A+V+HTCANDG VEGV L +GRAFS+QYHPEAAAG
Sbjct 300 IITAQNHGFALEGEAGQRFDTPFGEALVTHTCANDGTVEGVALANGRAFSMQYHPEAAAG 359
Query 357 PHDAEYLFDQFVELM 371
PHDA FDQFV L+
Sbjct 360 PHDAADHFDQFVGLL 374
>gi|326382159|ref|ZP_08203851.1| carbamoyl phosphate synthase small subunit [Gordonia neofelifaecis
NRRL B-59395]
gi|326198889|gb|EGD56071.1| carbamoyl phosphate synthase small subunit [Gordonia neofelifaecis
NRRL B-59395]
Length=397
Score = 513 bits (1321), Expect = 2e-143, Method: Compositional matrix adjust.
Identities = 256/389 (66%), Positives = 300/389 (78%), Gaps = 20/389 (5%)
Query 1 LSKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIG 60
+S+AVLVLE+G+VFTG+ FGATGQ GEAVF T M+GYQE LTDPSYHRQI+VATAPQIG
Sbjct 1 MSRAVLVLENGQVFTGQSFGATGQTFGEAVFCTAMTGYQEALTDPSYHRQILVATAPQIG 60
Query 61 NTGWNGEDSESR-GER-----------------IWVAGYAVRDPSPRASNWRATGTLEDE 102
NTGWN EDSES G+R IWV+GYAVR+P+ R SNWRA +LEDE
Sbjct 61 NTGWNTEDSESLLGKRSAVRWSADFIDHKDPGQIWVSGYAVRNPTRRVSNWRAGSSLEDE 120
Query 103 LIRQRIVGIAGIDTRAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAG 162
+I Q IVGIAGIDTRAVVR LR G+M+AG+FS A+ D++ VR+Q SM GADL+
Sbjct 121 MIGQHIVGIAGIDTRAVVRVLRDSGAMRAGIFSGDAVGTVDDMVETVRSQPSMAGADLSA 180
Query 163 EVSTAEPYVVEPDGPPGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAEL 222
EVST EPYVVE G G +RF VAALDLGIK NTPR A RG+ HVLP++ T++ I +
Sbjct 181 EVSTTEPYVVEAAG--GEARFKVAALDLGIKANTPRMLAARGVEVHVLPSTATYDDIRAI 238
Query 223 NPHGVFLSNGPGDPATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHR 282
G FLSNGPGDP T D VV LT E++ +G+P FGICFGNQI+GRA G STYK+ FGHR
Sbjct 239 GADGFFLSNGPGDPITTDRVVGLTSEIIDSGLPTFGICFGNQIMGRAFGRSTYKLKFGHR 298
Query 283 GINIPVVDHATGRVAVTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDG 342
GINIPV+D ATGRVA+TAQNHGFAL+GEAG+ F T G A VSH CANDGVVEGV+L+ G
Sbjct 299 GINIPVLDTATGRVAITAQNHGFALEGEAGEEFDTDLGRARVSHVCANDGVVEGVELMSG 358
Query 343 RAFSVQYHPEAAAGPHDAEYLFDQFVELM 371
+AFSVQYHPEAA+GPHDA LFD+FV +M
Sbjct 359 KAFSVQYHPEAASGPHDAANLFDKFVHVM 387
>gi|319950542|ref|ZP_08024452.1| carbamoyl phosphate synthase small subunit [Dietzia cinnamea
P4]
gi|319435792|gb|EFV91002.1| carbamoyl phosphate synthase small subunit [Dietzia cinnamea
P4]
Length=402
Score = 508 bits (1309), Expect = 5e-142, Method: Compositional matrix adjust.
Identities = 253/375 (68%), Positives = 295/375 (79%), Gaps = 9/375 (2%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A LVLEDGR+ G+ FGATG LGEAVF+TGMSGYQETLTDPSY RQIVV TAPQIGNTG
Sbjct 17 AALVLEDGRIHRGQAFGATGTTLGEAVFTTGMSGYQETLTDPSYCRQIVVTTAPQIGNTG 76
Query 64 WNGEDSESR------GERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTR 117
WN ED ES G RIWVAG +RD S RASN R+T TL +E++ Q +VGIAGIDTR
Sbjct 77 WNDEDGESLLDGEVGGGRIWVAGLVIRDLSRRASNHRSTRTLSEEMVAQGVVGIAGIDTR 136
Query 118 AVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGP 177
AVVRH+R RG+MKAG+FS L++ ++A VRAQQSM GA L+ EV+T+ PYVVEP+G
Sbjct 137 AVVRHIRERGAMKAGIFSGADLSDDGTMLAAVRAQQSMAGASLSEEVTTSAPYVVEPEGE 196
Query 178 PGVSRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPA 237
+RF+VAALDLGIK+NTPR A RG+R HV+PA +T + + +L+ GVFLSNGPGDPA
Sbjct 197 ---ARFSVAALDLGIKSNTPRMLAARGVRVHVIPAGSTLQDVLDLDVDGVFLSNGPGDPA 253
Query 238 TADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVA 297
TAD V LT+EVLG GIP FGICFGNQILGRALGL TYKM FGHRG NIPV++ ATG VA
Sbjct 254 TADAAVHLTKEVLGQGIPFFGICFGNQILGRALGLDTYKMRFGHRGTNIPVIEKATGSVA 313
Query 298 VTAQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGP 357
+T+QNHGFAL+ ++ TP+G A V+H CANDG VEGV L DG AFSVQYHPEAAAGP
Sbjct 314 ITSQNHGFALRAPENDTWETPWGTATVTHVCANDGTVEGVALTDGSAFSVQYHPEAAAGP 373
Query 358 HDAEYLFDQFVELMA 372
DA LFD+FV L+A
Sbjct 374 RDAADLFDRFVSLLA 388
>gi|334563388|ref|ZP_08516379.1| carbamoyl phosphate synthase small subunit [Corynebacterium bovis
DSM 20582]
Length=402
Score = 506 bits (1304), Expect = 2e-141, Method: Compositional matrix adjust.
Identities = 252/371 (68%), Positives = 292/371 (79%), Gaps = 4/371 (1%)
Query 2 SKAVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGN 61
+ A LVL DGRVF GR FGA G LGEAVF+TGM+GYQET+TDPSYHRQIVVATAP IGN
Sbjct 6 TPAALVLADGRVFRGRGFGAQGTTLGEAVFTTGMTGYQETMTDPSYHRQIVVATAPHIGN 65
Query 62 TGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVR 121
TGWN ED ESRG+RIWVAG AVRD S SNWRA +LE+E+ Q ++GI GIDTRAVVR
Sbjct 66 TGWNDEDGESRGDRIWVAGLAVRDLSHTVSNWRADRSLEEEMTAQGVIGIRGIDTRAVVR 125
Query 122 HLRSRGSMKAGVFS-DGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGV 180
HLR RG++ AG+ S D AL +L+ARV AQ M GADLA EV+T E YVVEP+G
Sbjct 126 HLRDRGAVAAGIVSGDDALLPEDELVARVAAQPGMEGADLASEVTTPEVYVVEPEGE--- 182
Query 181 SRFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATAD 240
+R+TV A D+GIKTNTPRN ARRG+R V+PA T + +AE + GVF+SNGPGDPATAD
Sbjct 183 TRYTVIAYDMGIKTNTPRNLARRGVRTVVVPAGTDLDSLAEWDYDGVFVSNGPGDPATAD 242
Query 241 HVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTA 300
VA R VL IP FGICFGNQILGRAL + TYK+ FGHRGIN+PV++H TG++ +TA
Sbjct 243 ATVAQVRTVLERKIPFFGICFGNQILGRALEMETYKLKFGHRGINVPVLNHVTGKIDITA 302
Query 301 QNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDA 360
QNHGFAL+G G++F TPFGPAVV+HTC ND VVEGV L DG A+SVQYHPEAAAGP DA
Sbjct 303 QNHGFALRGTPGETFDTPFGPAVVTHTCLNDDVVEGVALADGSAYSVQYHPEAAAGPRDA 362
Query 361 EYLFDQFVELM 371
LFDQF+ELM
Sbjct 363 NPLFDQFIELM 373
>gi|260578795|ref|ZP_05846702.1| carbamoyl-phosphate synthase, small subunit [Corynebacterium
jeikeium ATCC 43734]
gi|258603093|gb|EEW16363.1| carbamoyl-phosphate synthase, small subunit [Corynebacterium
jeikeium ATCC 43734]
Length=378
Score = 505 bits (1300), Expect = 5e-141, Method: Compositional matrix adjust.
Identities = 239/368 (65%), Positives = 294/368 (80%), Gaps = 7/368 (1%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A LVL DG++F GR FGATG+ LGEAVF+T M+GYQET+TDPSYHRQIVVATAPQIGNTG
Sbjct 6 AALVLADGKIFRGRAFGATGRTLGEAVFTTAMTGYQETMTDPSYHRQIVVATAPQIGNTG 65
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN EDSESRG++IWVAG +RD S SNWRA +L DE+ Q I+GI +DTRA+VRHL
Sbjct 66 WNDEDSESRGDKIWVAGLVIRDLSRSVSNWRANRSLPDEMEAQGIIGIQSVDTRAIVRHL 125
Query 124 RSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRF 183
R +GS+ AG+FS AL+ D+I++V+AQ SM GADL+ +VST E YVVE +G +R+
Sbjct 126 RDKGSVAAGIFSGDALSSDEDMISQVKAQPSMAGADLSADVSTDELYVVEAEGE---TRY 182
Query 184 TVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAEL----NPHGVFLSNGPGDPATA 239
TV A D+GIKTNTPR F++RG+R V+P++TTFE++ +L N GVF+SNGPGDPATA
Sbjct 183 TVIAYDMGIKTNTPREFSKRGVRTVVVPSNTTFEEVQKLMDEYNATGVFISNGPGDPATA 242
Query 240 DHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVT 299
D V +++L A IP FGICFGNQ+LGRALG+ TYK+ FGHRG N+PV+DH TGR+ +T
Sbjct 243 DATVEELKKILEAKIPFFGICFGNQLLGRALGMETYKLKFGHRGTNVPVLDHQTGRIDIT 302
Query 300 AQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHD 359
AQNHGFAL+G+A + F TPFG A V+HTC ND VVEGV L+DG AFSVQYHPE+AAGPHD
Sbjct 303 AQNHGFALKGKALEKFDTPFGEAQVTHTCLNDDVVEGVALLDGSAFSVQYHPESAAGPHD 362
Query 360 AEYLFDQF 367
A LFD+F
Sbjct 363 ANPLFDKF 370
>gi|68536100|ref|YP_250805.1| carbamoyl phosphate synthase small subunit [Corynebacterium jeikeium
K411]
gi|68263699|emb|CAI37187.1| carbamoyl-phosphate synthase small chain [Corynebacterium jeikeium
K411]
Length=378
Score = 505 bits (1300), Expect = 6e-141, Method: Compositional matrix adjust.
Identities = 239/368 (65%), Positives = 293/368 (80%), Gaps = 7/368 (1%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A LVL DG++F GR FGATG+ LGEAVF+T M+GYQET+TDPSYHRQIVVATAPQIGNTG
Sbjct 6 AALVLADGKIFRGRAFGATGRTLGEAVFTTAMTGYQETMTDPSYHRQIVVATAPQIGNTG 65
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN EDSESRG++IWVAG +RD S SNWRA +L DE+ Q I+GI +DTRA+VRHL
Sbjct 66 WNDEDSESRGDKIWVAGLVIRDLSRSVSNWRADRSLTDEMEAQGIIGIQNVDTRAIVRHL 125
Query 124 RSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRF 183
R +GS+ AG+FS AL D++++V+AQ SM GADL+ +VST E YVVEP+G ++
Sbjct 126 RDKGSVAAGIFSGDALTSDEDMLSQVQAQPSMAGADLSADVSTDELYVVEPEGE---TKH 182
Query 184 TVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQI----AELNPHGVFLSNGPGDPATA 239
TV A D+GIKTNTPR F++RG+R V+P++TTFE++ AE N GVF+SNGPGDPATA
Sbjct 183 TVIAYDMGIKTNTPREFSKRGVRSVVVPSNTTFEEVQKLMAEYNATGVFISNGPGDPATA 242
Query 240 DHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVT 299
D V +++L A IP FGICFGNQ+LGRALG+ TYK+ FGHRG N+PV+DH TGR+ +T
Sbjct 243 DATVEELKKILEAKIPFFGICFGNQLLGRALGMETYKLKFGHRGTNVPVLDHQTGRIDIT 302
Query 300 AQNHGFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHD 359
AQNHGFAL+G+A + F TPFG A V+HTC ND VVEGV L+DG AFSVQYHPE+AAGPHD
Sbjct 303 AQNHGFALKGKALEKFDTPFGEAQVTHTCLNDDVVEGVALLDGSAFSVQYHPESAAGPHD 362
Query 360 AEYLFDQF 367
A LFD+F
Sbjct 363 ANPLFDKF 370
>gi|237785582|ref|YP_002906287.1| carbamoyl-phosphate synthase small chain [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758494|gb|ACR17744.1| carbamoyl-phosphate synthase small chain [Corynebacterium kroppenstedtii
DSM 44385]
Length=415
Score = 502 bits (1293), Expect = 3e-140, Method: Compositional matrix adjust.
Identities = 252/388 (65%), Positives = 294/388 (76%), Gaps = 16/388 (4%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
AVLVL DGRVF G FGATG+ALGEAVF+TGM+GYQET+TDPSY RQ+V ATAPQIGNTG
Sbjct 27 AVLVLADGRVFRGISFGATGRALGEAVFTTGMTGYQETMTDPSYRRQLVCATAPQIGNTG 86
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN ED ESRG IWV+G +RD S R SNWR+ +L+DE+ Q I+GI +DTRA+VRHL
Sbjct 87 WNDEDDESRGSTIWVSGLIIRDLSARPSNWRSKRSLQDEMASQGIIGIKNVDTRALVRHL 146
Query 124 RSRGSMKAGVFSDGALAEPAD-LIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVS- 181
R +GS+ AG+F+ A+P D L++ V SM G DLA EVST EPY+VEP+G S
Sbjct 147 RDKGSVNAGIFTGDEAAKPVDELLSIVNEIPSMAGQDLAEEVSTDEPYIVEPEGTSSQSD 206
Query 182 RFTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADH 241
TV A D+GIKTNTPRNFARRGI+ V+PA+T+F+ I + NP GVF+SNGPGDP+TAD
Sbjct 207 TLTVVAYDMGIKTNTPRNFARRGIKTVVVPANTSFDDIQKYNPDGVFISNGPGDPSTADT 266
Query 242 VVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQ 301
+V + R+VL A IP FGICFGNQI GRALGL TYK+ FGHRGIN+PVVD ATGRV++TAQ
Sbjct 267 MVDIVRQVLSAKIPFFGICFGNQIFGRALGLGTYKLKFGHRGINVPVVDVATGRVSITAQ 326
Query 302 NHGFAL-------------QGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQ 348
NHGFAL E SF TPFGPA V+H C ND VVEGV L DGRAFSVQ
Sbjct 327 NHGFALLPPHVDDASETLSTEELTASFDTPFGPAHVTHICPNDNVVEGVALDDGRAFSVQ 386
Query 349 YHPEAAAGPHDAEYLFDQFVELMAGEGR 376
YHPEAAAGPHDA LFDQFV +M EG+
Sbjct 387 YHPEAAAGPHDANPLFDQFVTVMQ-EGK 413
>gi|324998658|ref|ZP_08119770.1| carbamoyl-phosphate synthase small subunit [Pseudonocardia sp.
P1]
Length=411
Score = 499 bits (1286), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 253/369 (69%), Positives = 292/369 (80%), Gaps = 5/369 (1%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A+LVLEDGR+F G +GATG+ LGEAVF+TGM+GYQETLTDPSYHRQIV+ TAPQIGNTG
Sbjct 3 ALLVLEDGRIFRGEAYGATGETLGEAVFTTGMTGYQETLTDPSYHRQIVLQTAPQIGNTG 62
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN +D ES G I VAGY VRDP+ RASNWR+TG+LED L Q IVG+AGIDTRA VRHL
Sbjct 63 WNDDDDESSG--IQVAGYVVRDPARRASNWRSTGSLEDALRGQGIVGVAGIDTRAAVRHL 120
Query 124 RSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRF 183
R RG+M+AG+FS ALA +L+ RV+ M GADL G V+TAE YVV G RF
Sbjct 121 RERGAMRAGIFSGDALAPDDELVERVKGSPQMEGADLYGAVTTAETYVVPAVGE---KRF 177
Query 184 TVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHVV 243
VAALD+GIK NTPR A RGI HVLPAS+T E + L P G FL+NGPGDPATAD V
Sbjct 178 VVAALDVGIKFNTPRMMAARGIEVHVLPASSTIETVESLRPDGFFLANGPGDPATADGPV 237
Query 244 ALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQNH 303
L ++VL IPLFGICFGNQILGRALG STYK+ +GHRGINIPVV+HATGRVA+T+QNH
Sbjct 238 ELAKQVLERRIPLFGICFGNQILGRALGRSTYKLRYGHRGINIPVVEHATGRVAITSQNH 297
Query 304 GFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEYL 363
GFA+ GEAG+ F TP+G A ++HTC NDG VEG+ +D AFSVQYHPEAAAGPHDA L
Sbjct 298 GFAVAGEAGEEFDTPYGRAQITHTCPNDGCVEGMAGLDFPAFSVQYHPEAAAGPHDAADL 357
Query 364 FDQFVELMA 372
FD+FV+LMA
Sbjct 358 FDRFVQLMA 366
>gi|331697312|ref|YP_004333551.1| carbamoyl-phosphate synthase small subunit [Pseudonocardia dioxanivorans
CB1190]
gi|326952001|gb|AEA25698.1| carbamoyl-phosphate synthase, small subunit [Pseudonocardia dioxanivorans
CB1190]
Length=603
Score = 496 bits (1277), Expect = 2e-138, Method: Compositional matrix adjust.
Identities = 257/369 (70%), Positives = 293/369 (80%), Gaps = 5/369 (1%)
Query 4 AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63
A+LVLEDGR+F G PFGA G+ LGEAVF+TGM+GYQETLTDPSYHRQIVV TAPQIGNTG
Sbjct 11 ALLVLEDGRIFRGEPFGAIGENLGEAVFTTGMTGYQETLTDPSYHRQIVVQTAPQIGNTG 70
Query 64 WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123
WN ED ES R+ VAGY VRDP+ R S+WR+ L + L Q +VG+AG+DTRAVVRHL
Sbjct 71 WNDEDDES--ARVQVAGYVVRDPARRPSSWRSRRALGEVLAEQGVVGVAGVDTRAVVRHL 128
Query 124 RSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRF 183
R RG+M+AGVFS ALA DL+ RV A M GADL G V+TAEPYVV G +RF
Sbjct 129 RERGAMRAGVFSGDALAPDGDLVERVLASPRMEGADLYGAVTTAEPYVVAAHG---EARF 185
Query 184 TVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGPGDPATADHVV 243
VAALD+GIK+NTPR A RGI HVLPA T+ EQI +L G F+SNGPGDPATAD V
Sbjct 186 RVAALDVGIKSNTPRMLAARGIEVHVLPADTSIEQIVDLGADGFFVSNGPGDPATADVPV 245
Query 244 ALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHATGRVAVTAQNH 303
ALTR VL GIP FGICFGNQIL RALG TYKM +GHRGINIPVV+HATGRVA+T+QNH
Sbjct 246 ALTRAVLERGIPTFGICFGNQILARALGRGTYKMRYGHRGINIPVVEHATGRVAITSQNH 305
Query 304 GFALQGEAGQSFATPFGPAVVSHTCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEYL 363
GFA++GEAG+ F TPFGPAV++HTC NDG VEG+ +D AFSVQYHPEAAAGPHDA L
Sbjct 306 GFAVEGEAGERFDTPFGPAVITHTCPNDGCVEGLAGLDFPAFSVQYHPEAAAGPHDAADL 365
Query 364 FDQFVELMA 372
FD+FV+LMA
Sbjct 366 FDRFVDLMA 374
Lambda K H
0.319 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 722036454250
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40