BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1386
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840844|ref|NP_335881.1| PE family protein [Mycobacterium tu... 190 7e-47
gi|254364274|ref|ZP_04980320.1| PE family protein [Mycobacterium... 189 1e-46
gi|340626400|ref|YP_004744852.1| PE family protein [Mycobacteriu... 186 8e-46
gi|289745138|ref|ZP_06504516.1| PE family protein [Mycobacterium... 140 4e-32
gi|15827194|ref|NP_301457.1| PE-family protein [Mycobacterium le... 137 5e-31
gi|240171484|ref|ZP_04750143.1| PE domain-containing protein [My... 108 3e-22
gi|118470806|ref|YP_885029.1| PE family protein [Mycobacterium s... 103 9e-21
gi|108797353|ref|YP_637550.1| PE-like protein [Mycobacterium sp.... 102 1e-20
gi|145220930|ref|YP_001131608.1| PE domain-containing protein [M... 100 6e-20
gi|15828365|ref|NP_302628.1| PE-family protein [Mycobacterium le... 99.4 2e-19
gi|296167588|ref|ZP_06849913.1| PE-family protein [Mycobacterium... 94.4 6e-18
gi|240169093|ref|ZP_04747752.1| hypothetical protein MkanA1_0725... 92.8 1e-17
gi|118617769|ref|YP_906101.1| PE family protein [Mycobacterium u... 90.9 5e-17
gi|118467190|ref|YP_883991.1| PE family protein [Mycobacterium a... 89.7 1e-16
gi|41409879|ref|NP_962715.1| hypothetical protein MAP3781 [Mycob... 88.6 3e-16
gi|120401439|ref|YP_951268.1| PE domain-containing protein [Myco... 88.6 3e-16
gi|254818902|ref|ZP_05223903.1| PE family protein [Mycobacterium... 88.6 3e-16
gi|118619480|ref|YP_907812.1| PE family protein [Mycobacterium u... 87.8 4e-16
gi|240173309|ref|ZP_04751967.1| PE family protein [Mycobacterium... 87.4 6e-16
gi|118616921|ref|YP_905253.1| PE family protein [Mycobacterium u... 85.5 2e-15
gi|169627151|ref|YP_001700800.1| PE family protein [Mycobacteriu... 84.0 7e-15
gi|15839671|ref|NP_334708.1| PE family protein [Mycobacterium tu... 84.0 7e-15
gi|240173110|ref|ZP_04751768.1| PE-family protein [Mycobacterium... 84.0 8e-15
gi|169627767|ref|YP_001701416.1| PE family protein [Mycobacteriu... 83.2 1e-14
gi|317506395|ref|ZP_07964203.1| PE family protein [Segniliparus ... 81.3 5e-14
gi|254777309|ref|ZP_05218825.1| hypothetical protein MaviaA2_219... 81.3 5e-14
gi|240168499|ref|ZP_04747158.1| PE family protein, PE5 [Mycobact... 80.9 6e-14
gi|342859231|ref|ZP_08715885.1| hypothetical protein MCOL_10143 ... 80.5 7e-14
gi|240170992|ref|ZP_04749651.1| hypothetical protein MkanA1_1690... 79.7 1e-13
gi|41406220|ref|NP_959056.1| hypothetical protein MAP0122 [Mycob... 79.3 2e-13
gi|323718348|gb|EGB27525.1| PE family protein [Mycobacterium tub... 79.3 2e-13
gi|333988933|ref|YP_004521547.1| PE family protein PE5 [Mycobact... 79.0 2e-13
gi|254773162|ref|ZP_05214678.1| PE family protein [Mycobacterium... 77.8 4e-13
gi|342860175|ref|ZP_08716827.1| PE family protein [Mycobacterium... 77.8 5e-13
gi|340628015|ref|YP_004746467.1| PE family protein [Mycobacteriu... 76.3 2e-12
gi|308372403|ref|ZP_07428546.2| putative PE family protein [Myco... 75.9 2e-12
gi|254365653|ref|ZP_04981698.1| PE family protein [Mycobacterium... 75.9 2e-12
gi|306777325|ref|ZP_07415662.1| putative PE family protein [Myco... 75.5 2e-12
gi|15842585|ref|NP_337622.1| PE family protein [Mycobacterium tu... 75.5 2e-12
gi|31794200|ref|NP_856693.1| PE family protein [Mycobacterium bo... 74.3 5e-12
gi|183983962|ref|YP_001852253.1| PE-PGRS family protein [Mycobac... 72.8 1e-11
gi|306804804|ref|ZP_07441472.1| putative PE family protein [Myco... 72.8 2e-11
gi|167966626|ref|ZP_02548903.1| PE family protein [Mycobacterium... 72.4 2e-11
gi|336460186|gb|EGO39090.1| PE family protein [Mycobacterium avi... 72.0 2e-11
gi|212596236|gb|ACJ35562.1| PE1 [Mycobacterium intracellulare AT... 72.0 3e-11
gi|254821558|ref|ZP_05226559.1| PE family protein [Mycobacterium... 72.0 3e-11
gi|183985227|ref|YP_001853518.1| PE family protein, PE5_1 [Mycob... 70.1 1e-10
gi|317506269|ref|ZP_07964086.1| PE family protein [Segniliparus ... 69.3 2e-10
gi|308369801|ref|ZP_07419129.2| PE family protein [Mycobacterium... 68.6 3e-10
gi|308380551|ref|ZP_07490320.2| putative PE family protein [Myco... 66.2 1e-09
>gi|15840844|ref|NP_335881.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792580|ref|NP_855073.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116857|ref|YP_177805.1| PE family protein [Mycobacterium tuberculosis H37Rv]
76 more sequence titles
Length=102
Score = 190 bits (482), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/102 (99%), Positives = 102/102 (100%), Gaps = 0/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ
Sbjct 1 MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL 102
HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL
Sbjct 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL 102
>gi|254364274|ref|ZP_04980320.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134149788|gb|EBA41833.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=102
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/102 (99%), Positives = 101/102 (99%), Gaps = 0/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCN VEFSVHGSQ
Sbjct 1 MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNTVEFSVHGSQ 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL 102
HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL
Sbjct 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL 102
>gi|340626400|ref|YP_004744852.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004590|emb|CCC43734.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=102
Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/102 (99%), Positives = 101/102 (99%), Gaps = 0/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ
Sbjct 1 MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL 102
HVAMAAQGVEELGRSGVGVAESGASYAA DALAAASYLSGGL
Sbjct 61 HVAMAAQGVEELGRSGVGVAESGASYAAGDALAAASYLSGGL 102
>gi|289745138|ref|ZP_06504516.1| PE family protein [Mycobacterium tuberculosis 02_1987]
gi|289685666|gb|EFD53154.1| PE family protein [Mycobacterium tuberculosis 02_1987]
Length=73
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)
Query 30 AAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQHVAMAAQGVEELGRSGVGVAESGASYAAR 89
AAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQHVAMAAQGVEELGRSGVGVAESGASYAAR
Sbjct 1 AAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQHVAMAAQGVEELGRSGVGVAESGASYAAR 60
Query 90 DALAAASYLSGGL 102
DALAAASYLSGGL
Sbjct 61 DALAAASYLSGGL 73
>gi|15827194|ref|NP_301457.1| PE-family protein [Mycobacterium leprae TN]
gi|221229672|ref|YP_002503088.1| PE-family protein [Mycobacterium leprae Br4923]
gi|13092742|emb|CAC30046.1| PE-family protein [Mycobacterium leprae]
gi|219932779|emb|CAR70631.1| PE-family protein [Mycobacterium leprae Br4923]
Length=102
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/102 (72%), Positives = 78/102 (77%), Gaps = 0/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TL V+PE L GASA IEA+TA LA HA AAPFI VIPPGS SVSV N V F+VHG Q
Sbjct 1 MTLGVIPEGLEGASAVIEALTAHLATVHAEAAPFIMEVIPPGSGSVSVQNQVGFNVHGCQ 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL 102
+VAM A G EELGR GVGVAESG SYA RDA A ASYL GGL
Sbjct 61 YVAMTAHGAEELGRWGVGVAESGVSYALRDAFAVASYLGGGL 102
>gi|240171484|ref|ZP_04750143.1| PE domain-containing protein [Mycobacterium kansasii ATCC 12478]
Length=113
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/102 (67%), Positives = 77/102 (76%), Gaps = 0/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
VTL VVPE L ASAAIEA+T RLAAAHAAA P I V PP +D VSV +AVE V GS
Sbjct 12 VTLSVVPEGLIAASAAIEALTTRLAAAHAAAVPLITVVAPPAADPVSVQSAVEAGVRGSA 71
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGGL 102
H A+AA+G+E+LGRSGV VAES +YA DA+AA SYLS GL
Sbjct 72 HAAVAARGLEDLGRSGVAVAESATTYATGDAVAAVSYLSAGL 113
>gi|118470806|ref|YP_885029.1| PE family protein [Mycobacterium smegmatis str. MC2 155]
gi|118172093|gb|ABK72989.1| pe family protein [Mycobacterium smegmatis str. MC2 155]
Length=103
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/99 (69%), Positives = 81/99 (82%), Gaps = 0/99 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE L AS+A+EA+TARLAAAHAAAAP I+ V+PP +D+VS+ A FS +G+Q
Sbjct 1 MTLRVVPEGLTAASSAVEALTARLAAAHAAAAPMISTVLPPAADAVSLQTAAGFSANGAQ 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLS 99
A+AAQGVEELGRSGVGV ESG SYA DA AAASYL+
Sbjct 61 QSAVAAQGVEELGRSGVGVGESGVSYATGDAQAAASYLT 99
>gi|108797353|ref|YP_637550.1| PE-like protein [Mycobacterium sp. MCS]
gi|119866438|ref|YP_936390.1| PE domain-containing protein [Mycobacterium sp. KMS]
gi|126432975|ref|YP_001068666.1| PE domain-containing protein [Mycobacterium sp. JLS]
gi|108767772|gb|ABG06494.1| PE-like protein [Mycobacterium sp. MCS]
gi|119692527|gb|ABL89600.1| PE domain protein [Mycobacterium sp. KMS]
gi|126232775|gb|ABN96175.1| PE domain protein [Mycobacterium sp. JLS]
Length=102
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/98 (65%), Positives = 80/98 (82%), Gaps = 0/98 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE L ASAA+EA+TARLA+AHAAAAP I V+PP +D+VS+ A S +G +
Sbjct 1 MTLRVVPEGLTAASAAVEALTARLASAHAAAAPLIGTVLPPAADAVSLQTAAGLSANGGR 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL 98
H A+AAQGV+ELGRSGVGV +SGASYAA DA+ A++Y+
Sbjct 61 HEAVAAQGVQELGRSGVGVGQSGASYAAGDAMNASAYM 98
>gi|145220930|ref|YP_001131608.1| PE domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|315442100|ref|YP_004074979.1| PE family protein [Mycobacterium sp. Spyr1]
gi|145213416|gb|ABP42820.1| PE domain protein [Mycobacterium gilvum PYR-GCK]
gi|315260403|gb|ADT97144.1| PE family protein [Mycobacterium sp. Spyr1]
Length=102
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/98 (64%), Positives = 79/98 (81%), Gaps = 0/98 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE L ASAA+EA+TAR+AAAHAAAAP + AV+PP +D+VS+ A S +G +
Sbjct 1 MTLRVVPEGLTAASAAVEALTARMAAAHAAAAPLVTAVLPPAADAVSLQTATGLSANGVE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL 98
H ++AA+GVEELGRSGVGV +S ASY + DA+AA SYL
Sbjct 61 HQSIAARGVEELGRSGVGVGDSAASYVSGDAMAATSYL 98
>gi|15828365|ref|NP_302628.1| PE-family protein [Mycobacterium leprae TN]
gi|221230842|ref|YP_002504258.1| PE-family protein [Mycobacterium leprae Br4923]
gi|13093795|emb|CAC32065.1| PE-family protein [Mycobacterium leprae]
gi|219933949|emb|CAR72633.1| PE-family protein [Mycobacterium leprae Br4923]
Length=102
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/97 (59%), Positives = 72/97 (75%), Gaps = 0/97 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA S A++A+TARL AAHAAA P + AV+PP +D VS+ A FS G +
Sbjct 1 MTLRVVPEKLAATSEAMKALTARLEAAHAAAFPCLVAVVPPAADPVSLQTAAGFSARGQE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
H +AAQGVEELGR+G+GV +S YA DALAA++Y
Sbjct 61 HALVAAQGVEELGRAGIGVGQSSTHYAISDALAASTY 97
>gi|296167588|ref|ZP_06849913.1| PE-family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897131|gb|EFG76742.1| PE-family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=102
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/101 (70%), Positives = 80/101 (80%), Gaps = 0/101 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA SAA+EA+TARLAAAHAAAAP I AV+PP D VSV AV FS GS+
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSVQTAVGFSAQGSE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGG 101
H A+AAQGVEELGR+GVGV E+GASY A D AAA++ GG
Sbjct 61 HAAVAAQGVEELGRAGVGVGEAGASYLAGDTAAAATFGFGG 101
>gi|240169093|ref|ZP_04747752.1| hypothetical protein MkanA1_07254 [Mycobacterium kansasii ATCC
12478]
Length=103
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/101 (66%), Positives = 75/101 (75%), Gaps = 1/101 (0%)
Query 3 LRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQHV 62
LRVVPE LA ASAA+EA+TARL AAHA AAP I AV+PP +D VSV A FSV G H
Sbjct 2 LRVVPEGLAAASAAVEALTARLTAAHAGAAPLITAVVPPAADPVSVATAAGFSVQGDIHA 61
Query 63 AMAAQGVEELGRSGVGVAESGASYAARDALAAASY-LSGGL 102
+AA GVEELGRSG + ESG YAA DA+AA +Y +SGGL
Sbjct 62 TVAAGGVEELGRSGAALGESGIGYAAGDAVAACAYGISGGL 102
>gi|118617769|ref|YP_906101.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183983006|ref|YP_001851297.1| PE family protein [Mycobacterium marinum M]
gi|118569879|gb|ABL04630.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183176332|gb|ACC41442.1| PE family protein [Mycobacterium marinum M]
Length=101
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/97 (63%), Positives = 75/97 (78%), Gaps = 0/97 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+ LRVVPE L SAA+EA+TARLAAA+AA AP I AV+PP +D VS+ A+ FS HG +
Sbjct 1 MVLRVVPEGLVATSAAVEALTARLAAANAALAPLITAVVPPAADPVSLEAAIGFSAHGVE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
HVA+ +G+EELGRSGVGV ESG SYA+ DA AA +Y
Sbjct 61 HVAVTTEGIEELGRSGVGVGESGLSYASGDAAAALTY 97
>gi|118467190|ref|YP_883991.1| PE family protein [Mycobacterium avium 104]
gi|118168477|gb|ABK69374.1| pe family protein [Mycobacterium avium 104]
gi|212595842|gb|ACJ35527.1| PE11 [Mycobacterium avium subsp. avium]
Length=102
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/97 (68%), Positives = 78/97 (81%), Gaps = 0/97 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA SAA+EA+TARLAAAHAAAAP I AV+PP +D VS+ A+ FS G +
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
H A+AAQGVEELGR+GVGV E+GASY A D AAA++
Sbjct 61 HSAVAAQGVEELGRAGVGVGEAGASYLAGDTAAAATF 97
>gi|41409879|ref|NP_962715.1| hypothetical protein MAP3781 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398711|gb|AAS06331.1| hypothetical protein MAP_3781 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=102
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/97 (66%), Positives = 78/97 (81%), Gaps = 0/97 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA SAA+EA+TARLAAAHAAAAP I AV+PP +D VS+ A+ FS G +
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
H A+AAQGVEELGR+GVGV ++GASY A D AAA++
Sbjct 61 HSAVAAQGVEELGRAGVGVGQAGASYLAGDTAAAATF 97
>gi|120401439|ref|YP_951268.1| PE domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119954257|gb|ABM11262.1| PE domain protein [Mycobacterium vanbaalenii PYR-1]
Length=102
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/98 (64%), Positives = 77/98 (79%), Gaps = 0/98 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE L A AA+EA+TAR+AAAHAAAAP + AV+PP +D VS+ A FS ++
Sbjct 1 MTLRVVPEGLTAAGAAVEALTARMAAAHAAAAPVVTAVLPPAADVVSLQAATGFSARAAE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL 98
H ++AAQGVEELGRSG+ V ES ASYA DA+AA+SYL
Sbjct 61 HQSVAAQGVEELGRSGIAVGESAASYAGGDAMAASSYL 98
>gi|254818902|ref|ZP_05223903.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
gi|212596327|gb|ACJ35569.1| PE11 [Mycobacterium intracellulare ATCC 13950]
Length=102
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/97 (66%), Positives = 76/97 (79%), Gaps = 0/97 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA SAA+EA+TARLAAAHAAAAP I AV+PP D VS+ A+ FS G +
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSLQTAMGFSAQGQE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
H AMA QGVEELGR+G+GV E+GASY A D AAA++
Sbjct 61 HSAMAVQGVEELGRAGLGVGEAGASYLAGDTAAAATF 97
>gi|118619480|ref|YP_907812.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118571590|gb|ABL06341.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=104
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/86 (69%), Positives = 67/86 (78%), Gaps = 0/86 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
V LRV+PE LAGASAA+ +TARLAAAHA AAP I AVIPP +D VSV NA FS G +
Sbjct 2 VMLRVIPEGLAGASAAVAGLTARLAAAHAVAAPAITAVIPPAADPVSVRNAAGFSAVGVE 61
Query 61 HVAMAAQGVEELGRSGVGVAESGASY 86
H AMA +G+EELGRSGVGV E+G SY
Sbjct 62 HSAMATEGIEELGRSGVGVGEAGISY 87
>gi|240173309|ref|ZP_04751967.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=104
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/103 (67%), Positives = 80/103 (78%), Gaps = 1/103 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TL+VVPE LA AS A+EA+TARLAAAHAAA P I AV+PP +D VS+ A FS HGS
Sbjct 1 MTLQVVPEGLAAASGAVEALTARLAAAHAAALPAITAVVPPAADPVSIQTAAGFSTHGSA 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY-LSGGL 102
H A+ A+G+EELGRSG+GVAESG SYAA DA AA +Y SGG
Sbjct 61 HAAVVAEGIEELGRSGIGVAESGVSYAAGDAAAAVTYSASGGW 103
>gi|118616921|ref|YP_905253.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183980572|ref|YP_001848863.1| PE family protein, PE5 [Mycobacterium marinum M]
gi|118569031|gb|ABL03782.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183173898|gb|ACC39008.1| PE family protein, PE5 [Mycobacterium marinum M]
Length=102
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/97 (65%), Positives = 78/97 (81%), Gaps = 0/97 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA ASAA+EA+TARLAAAHA+A+P I+AV+P D VS+ A FS G +
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHASASPVISAVVPAAVDPVSLQTAAGFSAQGIE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
H A+AA+GVEELGR+G+GV ESG SY A DA+AAA+Y
Sbjct 61 HAAVAAEGVEELGRAGLGVGESGVSYLAGDAVAAATY 97
>gi|169627151|ref|YP_001700800.1| PE family protein [Mycobacterium abscessus ATCC 19977]
gi|169629317|ref|YP_001702966.1| PE family protein [Mycobacterium abscessus ATCC 19977]
gi|169239118|emb|CAM60146.1| Probable PE family protein [Mycobacterium abscessus]
gi|169241284|emb|CAM62312.1| Hypothetical PE family protein [Mycobacterium abscessus]
Length=102
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/98 (61%), Positives = 72/98 (74%), Gaps = 0/98 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+ L VVPE L SAA+EA+TARLAAAHAAAAP I AV+PP +D VS+ A FS G +
Sbjct 1 MNLNVVPEGLTATSAAVEALTARLAAAHAAAAPVIGAVVPPAADPVSLETAAGFSARGIE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL 98
H +AAQ VEELGR+G+GV+ES ASY D AAA+Y+
Sbjct 61 HSGVAAQAVEELGRAGLGVSESAASYTTGDMQAAAAYM 98
>gi|15839671|ref|NP_334708.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31791464|ref|NP_853957.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116715|ref|YP_177710.1| PE family protein [Mycobacterium tuberculosis H37Rv]
81 more sequence titles
Length=102
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/97 (68%), Positives = 77/97 (80%), Gaps = 0/97 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA ASAA+EA+TARLAAAHA+AAP I AV+PP +D VS+ A FS G +
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
H + A+GVEELGR+GVGV ESGASY A DA AAA+Y
Sbjct 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
>gi|240173110|ref|ZP_04751768.1| PE-family protein [Mycobacterium kansasii ATCC 12478]
Length=102
Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/90 (72%), Positives = 72/90 (80%), Gaps = 0/90 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA ASAA+EA+TARLAAAHAAAAP I AV+PP D VS+ A EFSV G +
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHAAAAPSIVAVVPPAVDPVSLQTAAEFSVQGQE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARD 90
H +A QGVEELGR+GVGV ESGASY A D
Sbjct 61 HAVVATQGVEELGRAGVGVGESGASYLAGD 90
>gi|169627767|ref|YP_001701416.1| PE family protein [Mycobacterium abscessus ATCC 19977]
gi|169239734|emb|CAM60762.1| PE family protein [Mycobacterium abscessus]
Length=102
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 0/100 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
++L VVPE L ASAA+EA+TARLAA +AAAAP I AV+PP +D VS+ +A FS HG +
Sbjct 1 MSLNVVPEGLTAASAAVEALTARLAAVNAAAAPVIGAVMPPAADPVSMQSAALFSAHGLE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSG 100
A+ ELGRSGVG E+ ASY D AAA+YL G
Sbjct 61 RTGAGARAAYELGRSGVGATEAAASYTVGDIQAAATYLPG 100
>gi|317506395|ref|ZP_07964203.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
gi|316255311|gb|EFV14573.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
Length=102
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/97 (60%), Positives = 70/97 (73%), Gaps = 0/97 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+ L+VVPE L ASA +EA+TARLAAA AAAAP I AV+PP +D VS+ A FS GS
Sbjct 1 MILKVVPEGLMAASAEVEALTARLAAAQAAAAPVIGAVVPPAADPVSLQAAAGFSARGSS 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
H A+AA+ VEELGRSG+GVAE+ SYA D AA +
Sbjct 61 HTAVAAEAVEELGRSGLGVAETAESYAVGDLQGAAVF 97
>gi|254777309|ref|ZP_05218825.1| hypothetical protein MaviaA2_21931 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=98
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/93 (66%), Positives = 74/93 (80%), Gaps = 0/93 (0%)
Query 5 VVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQHVAM 64
+VPE LA SAA+EA+TARLAAAHAAAAP I AV+PP +D VS+ A+ FS G +H A+
Sbjct 1 MVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQEHSAV 60
Query 65 AAQGVEELGRSGVGVAESGASYAARDALAAASY 97
AAQGVEELGR+GVGV E+GASY A D AAA++
Sbjct 61 AAQGVEELGRAGVGVGEAGASYLAGDTAAAATF 93
>gi|240168499|ref|ZP_04747158.1| PE family protein, PE5 [Mycobacterium kansasii ATCC 12478]
Length=104
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/103 (68%), Positives = 81/103 (79%), Gaps = 1/103 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA ASAA+EA+TARLAAA AAAAP I AV+PP +D VS+ A FS G +
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAQAAAAPLITAVVPPAADPVSLQTAAGFSGQGVE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGGL 102
H A+ A+GVEELGRSGVGV E+G SYA DA AAA+YL SGGL
Sbjct 61 HAAIVAEGVEELGRSGVGVGEAGVSYAVGDAAAAATYLASGGL 103
>gi|342859231|ref|ZP_08715885.1| hypothetical protein MCOL_10143 [Mycobacterium colombiense CECT
3035]
gi|342133472|gb|EGT86675.1| hypothetical protein MCOL_10143 [Mycobacterium colombiense CECT
3035]
Length=98
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/93 (66%), Positives = 72/93 (78%), Gaps = 0/93 (0%)
Query 5 VVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQHVAM 64
+VPE LA SAA+EA+TARLAAAHAAAAP I AV+PP D VS+ A FS G +H AM
Sbjct 1 MVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSLQTAAGFSAQGQEHSAM 60
Query 65 AAQGVEELGRSGVGVAESGASYAARDALAAASY 97
AAQGVEELGR+GVGV ++GASY A D AAA++
Sbjct 61 AAQGVEELGRAGVGVGQAGASYLAGDTAAAATF 93
>gi|240170992|ref|ZP_04749651.1| hypothetical protein MkanA1_16900 [Mycobacterium kansasii ATCC
12478]
Length=104
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/103 (68%), Positives = 82/103 (80%), Gaps = 1/103 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TL VVPE LA ASAA+EA+TARLAAAHAAAAP I AV+PP +D VS+ + S G++
Sbjct 1 MTLWVVPEGLAAASAAVEALTARLAAAHAAAAPVITAVVPPAADPVSLQTGIGLSALGNE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGGL 102
HVAMAA+ VEELGRSGVGV ESG SYAA DA AA +YL +GGL
Sbjct 61 HVAMAAEAVEELGRSGVGVGESGVSYAAGDAAAAGTYLGAGGL 103
>gi|41406220|ref|NP_959056.1| hypothetical protein MAP0122 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464188|ref|YP_879413.1| PE family protein [Mycobacterium avium 104]
gi|41394568|gb|AAS02439.1| PE_1 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165475|gb|ABK66372.1| PE family protein [Mycobacterium avium 104]
gi|336458087|gb|EGO37073.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=101
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/101 (57%), Positives = 77/101 (77%), Gaps = 0/101 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRV+PE LA SAA++A+TA+LAA HAAAAP ++ V+PP +D VS+ A FS GSQ
Sbjct 1 MTLRVIPEGLAATSAAVDAITAQLAAVHAAAAPVVSVVVPPAADPVSLAAAAVFSERGSQ 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGG 101
H A A +GVE LGR+G+GV+ +G +Y A DA +A++YLS G
Sbjct 61 HSAAATKGVEVLGRAGLGVSLAGVNYVAGDAASASTYLSAG 101
>gi|323718348|gb|EGB27525.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=127
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/94 (70%), Positives = 75/94 (80%), Gaps = 0/94 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
VTLRVVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 34 VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 93
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAA 94
H A+A +GVEELGRSGV V ESG YAA DA+AA
Sbjct 94 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAA 127
>gi|333988933|ref|YP_004521547.1| PE family protein PE5 [Mycobacterium sp. JDM601]
gi|333484901|gb|AEF34293.1| PE family protein PE5 [Mycobacterium sp. JDM601]
Length=103
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 75/100 (75%), Gaps = 0/100 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TL VVPE LA ASAA+EA+TARLAAA AAAAP I AV+PP +D VS+ A FS G++
Sbjct 1 MTLNVVPEGLAAASAAVEALTARLAAAQAAAAPLITAVVPPAADPVSLQTAAGFSAQGTE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSG 100
H A+AAQG ELGR+GVGV ESG +YAA DA A+ Y G
Sbjct 61 HAAVAAQGATELGRAGVGVGESGVNYAAGDAAGASRYFMG 100
>gi|254773162|ref|ZP_05214678.1| PE family protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|212595728|gb|ACJ35519.1| PE1 [Mycobacterium avium subsp. avium]
Length=101
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/101 (56%), Positives = 76/101 (76%), Gaps = 0/101 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRV+PE LA SAA++ +TA+LAA HAAAAP ++ V+PP +D VS+ A FS GSQ
Sbjct 1 MTLRVIPEGLAATSAAVDVITAQLAAVHAAAAPVVSVVVPPAADPVSLAAAAVFSERGSQ 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGG 101
H A A +GVE LGR+G+GV+ +G +Y A DA +A++YLS G
Sbjct 61 HSAAATKGVEVLGRAGLGVSLAGVNYVAGDAASASTYLSAG 101
>gi|342860175|ref|ZP_08716827.1| PE family protein [Mycobacterium colombiense CECT 3035]
gi|342132553|gb|EGT85782.1| PE family protein [Mycobacterium colombiense CECT 3035]
Length=101
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/101 (57%), Positives = 76/101 (76%), Gaps = 0/101 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRV+PE LA SAA++A+TA+LAA HAAAAP ++ V+PP +D VS+ A FS GSQ
Sbjct 1 MTLRVLPEGLAATSAAVDAITAQLAAVHAAAAPVVSVVVPPAADPVSLVAAAVFSERGSQ 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGG 101
H A AA+GVE LGR+G+GV+ +G +Y A DA A++YL G
Sbjct 61 HSAAAAKGVEVLGRAGLGVSLAGVNYVAGDAAGASTYLGAG 101
>gi|340628015|ref|YP_004746467.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006205|emb|CCC45379.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=104
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/102 (70%), Positives = 83/102 (82%), Gaps = 1/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG 101
H A+AA+GVEELGRSGV V ESG YAA DA+AAA+YL SGG
Sbjct 61 HAAIAAEGVEELGRSGVAVGESGVGYAAGDAVAAATYLVSGG 102
>gi|308372403|ref|ZP_07428546.2| putative PE family protein [Mycobacterium tuberculosis SUMu004]
gi|308333337|gb|EFP22188.1| putative PE family protein [Mycobacterium tuberculosis SUMu004]
Length=102
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/93 (68%), Positives = 73/93 (79%), Gaps = 0/93 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
VTL VVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 10 VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 69
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALA 93
H A+A +GVEELGRSGV V ESG YAA DA+A
Sbjct 70 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVA 102
>gi|254365653|ref|ZP_04981698.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|297635651|ref|ZP_06953431.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297732649|ref|ZP_06961767.1| PE family protein [Mycobacterium tuberculosis KZN R506]
gi|134151166|gb|EBA43211.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=107
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/102 (70%), Positives = 82/102 (81%), Gaps = 1/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
VTLRVVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 4 VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 63
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG 101
H A+A +GVEELGRSGV V ESG YAA DA+AAA+YL SGG
Sbjct 64 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 105
>gi|306777325|ref|ZP_07415662.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
gi|306973440|ref|ZP_07486101.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
gi|307085746|ref|ZP_07494859.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
gi|308214314|gb|EFO73713.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
gi|308357183|gb|EFP46034.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
gi|308364738|gb|EFP53589.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
gi|323718352|gb|EGB27528.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
gi|339299470|gb|AEJ51580.1| PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=105
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/102 (70%), Positives = 82/102 (81%), Gaps = 1/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
VTLRVVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 2 VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 61
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG 101
H A+A +GVEELGRSGV V ESG YAA DA+AAA+YL SGG
Sbjct 62 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 103
>gi|15842585|ref|NP_337622.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|148824213|ref|YP_001288967.1| PE family protein [Mycobacterium tuberculosis F11]
gi|289553187|ref|ZP_06442397.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|13882898|gb|AAK47436.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|148722740|gb|ABR07365.1| PE family protein [Mycobacterium tuberculosis F11]
gi|289437819|gb|EFD20312.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|328457658|gb|AEB03081.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
gi|344220857|gb|AEN01488.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=137
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/102 (70%), Positives = 82/102 (81%), Gaps = 1/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
VTLRVVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 34 VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 93
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG 101
H A+A +GVEELGRSGV V ESG YAA DA+AAA+YL SGG
Sbjct 94 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 135
>gi|31794200|ref|NP_856693.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57117050|ref|YP_177685.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121638905|ref|YP_979129.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
19 more sequence titles
Length=104
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/102 (69%), Positives = 82/102 (81%), Gaps = 1/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG 101
H A+A +GVEELGRSGV V ESG YAA DA+AAA+YL SGG
Sbjct 61 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 102
>gi|183983962|ref|YP_001852253.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177288|gb|ACC42398.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=103
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 78/100 (78%), Gaps = 0/100 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TL+VVPE L ASAA++A+TARLAAAHAAAAP I+AV+PP D VS+ AV FS G +
Sbjct 1 MTLQVVPEGLLAASAAVQAITARLAAAHAAAAPAISAVVPPAVDPVSLQTAVVFSAQGGE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSG 100
+ QGV+EL RSGVGVAESGA YAARDA+AAASY G
Sbjct 61 RALVGVQGVDELARSGVGVAESGADYAARDAMAAASYTFG 100
>gi|306804804|ref|ZP_07441472.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
gi|306808997|ref|ZP_07445665.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308372321|ref|ZP_07667351.1| PE family protein [Mycobacterium tuberculosis SUMu004]
6 more sequence titles
Length=105
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/102 (69%), Positives = 81/102 (80%), Gaps = 1/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
VTL VVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 2 VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 61
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG 101
H A+A +GVEELGRSGV V ESG YAA DA+AAA+YL SGG
Sbjct 62 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 103
>gi|167966626|ref|ZP_02548903.1| PE family protein [Mycobacterium tuberculosis H37Ra]
Length=107
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/102 (69%), Positives = 81/102 (80%), Gaps = 1/102 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
VTL VVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 4 VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 63
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG 101
H A+A +GVEELGRSGV V ESG YAA DA+AAA+YL SGG
Sbjct 64 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 105
>gi|336460186|gb|EGO39090.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=80
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/79 (70%), Positives = 65/79 (83%), Gaps = 0/79 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRVVPE LA SAA+EA+TARLAAAHAAAAP I AV+PP +D VS+ A+ FS G +
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE 60
Query 61 HVAMAAQGVEELGRSGVGV 79
H A+AAQGVEELGR+GVGV
Sbjct 61 HSAVAAQGVEELGRAGVGV 79
>gi|212596236|gb|ACJ35562.1| PE1 [Mycobacterium intracellulare ATCC 13950]
Length=105
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/101 (62%), Positives = 79/101 (79%), Gaps = 0/101 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRV+PE LA SAA+EA+TA+LAAAHAAAAP ++AV+PP +D VS+ A FS GSQ
Sbjct 4 MTLRVLPEGLAATSAAVEAITAQLAAAHAAAAPVVSAVVPPAADPVSLGAAAVFSGRGSQ 63
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGG 101
H A AA+GVE LGR+G+GV+ +G YAA+DA AA+YL G
Sbjct 64 HTAAAAKGVEVLGRAGLGVSLAGVGYAAQDAADAATYLGAG 104
>gi|254821558|ref|ZP_05226559.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
Length=102
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/101 (62%), Positives = 79/101 (79%), Gaps = 0/101 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+TLRV+PE LA SAA+EA+TA+LAAAHAAAAP ++AV+PP +D VS+ A FS GSQ
Sbjct 1 MTLRVLPEGLAATSAAVEAITAQLAAAHAAAAPVVSAVVPPAADPVSLGAAAVFSGRGSQ 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASYLSGG 101
H A AA+GVE LGR+G+GV+ +G YAA+DA AA+YL G
Sbjct 61 HTAAAAKGVEVLGRAGLGVSLAGVGYAAQDAADAATYLGAG 101
>gi|183985227|ref|YP_001853518.1| PE family protein, PE5_1 [Mycobacterium marinum M]
gi|183178553|gb|ACC43663.1| PE family protein, PE5_1 [Mycobacterium marinum M]
Length=103
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/86 (69%), Positives = 68/86 (80%), Gaps = 0/86 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
+ LRV+PE LAGASAA+ A+TARLAAAHA AAP I AVIPP +D VSV NA FS G +
Sbjct 1 MMLRVIPEGLAGASAAVAALTARLAAAHAVAAPAITAVIPPAADPVSVRNAAGFSAVGVE 60
Query 61 HVAMAAQGVEELGRSGVGVAESGASY 86
H AMA +G+EELGRSGVGV E+G SY
Sbjct 61 HSAMATEGIEELGRSGVGVGEAGISY 86
>gi|317506269|ref|ZP_07964086.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
gi|316255435|gb|EFV14688.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
Length=101
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/88 (56%), Positives = 58/88 (66%), Gaps = 0/88 (0%)
Query 3 LRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQHV 62
LR +PE +A SA +E++TARLAAAHAAAAP I AV+PP D VS A E SVHG+Q
Sbjct 3 LRTLPEGMAATSALMESITARLAAAHAAAAPIITAVVPPAIDVVSTSAATELSVHGAQRQ 62
Query 63 AMAAQGVEELGRSGVGVAESGASYAARD 90
A GV L S +GVA+SG SY D
Sbjct 63 ISGATGVSALAASSLGVADSGLSYQEGD 90
>gi|308369801|ref|ZP_07419129.2| PE family protein [Mycobacterium tuberculosis SUMu002]
gi|308371210|ref|ZP_07424193.2| PE family protein [Mycobacterium tuberculosis SUMu003]
gi|308373640|ref|ZP_07433147.2| putative PE family protein [Mycobacterium tuberculosis SUMu005]
gi|308374703|ref|ZP_07437033.2| putative PE family protein [Mycobacterium tuberculosis SUMu006]
gi|308326369|gb|EFP15220.1| PE family protein [Mycobacterium tuberculosis SUMu002]
gi|308329490|gb|EFP18341.1| PE family protein [Mycobacterium tuberculosis SUMu003]
gi|308336869|gb|EFP25720.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
gi|308341019|gb|EFP29870.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=104
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/86 (68%), Positives = 67/86 (78%), Gaps = 0/86 (0%)
Query 1 VTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
VTL VVPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+
Sbjct 10 VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 69
Query 61 HVAMAAQGVEELGRSGVGVAESGASY 86
H A+A +GVEELGRSGV V ESG Y
Sbjct 70 HAAIAGEGVEELGRSGVAVGESGIGY 95
>gi|308380551|ref|ZP_07490320.2| putative PE family protein [Mycobacterium tuberculosis SUMu011]
gi|313659981|ref|ZP_07816861.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
gi|308361135|gb|EFP49986.1| putative PE family protein [Mycobacterium tuberculosis SUMu011]
Length=100
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/98 (68%), Positives = 78/98 (80%), Gaps = 1/98 (1%)
Query 5 VVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQHVAM 64
+VPE LA ASAA+EA+TARLAAAHA AAP I AV+ P +D VS+ +AV FS GS+H A+
Sbjct 1 MVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSEHAAI 60
Query 65 AAQGVEELGRSGVGVAESGASYAARDALAAASYL-SGG 101
A +GVEELGRSGV V ESG YAA DA+AAA+YL SGG
Sbjct 61 AGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 98
Lambda K H
0.313 0.124 0.333
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128294982110
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40