BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1387 Length=539 Score E Sequences producing significant alignments: (Bits) Value gi|15840845|ref|NP_335882.1| PPE family protein [Mycobacterium t... 1075 0.0 gi|31792581|ref|NP_855074.1| PPE family protein [Mycobacterium b... 1074 0.0 gi|289757493|ref|ZP_06516871.1| PPE family protein [Mycobacteriu... 1074 0.0 gi|298524892|ref|ZP_07012301.1| PPE family protein [Mycobacteriu... 1074 0.0 gi|289574053|ref|ZP_06454280.1| PPE family protein [Mycobacteriu... 1073 0.0 gi|340626401|ref|YP_004744853.1| PPE family protein [Mycobacteri... 1073 0.0 gi|289569402|ref|ZP_06449629.1| PPE family protein [Mycobacteriu... 1071 0.0 gi|306792808|ref|ZP_07431110.1| putative PPE family protein [Myc... 787 0.0 gi|306784116|ref|ZP_07422438.1| PPE family protein [Mycobacteriu... 764 0.0 gi|308371955|ref|ZP_07426806.2| putative PPE family protein [Myc... 757 0.0 gi|308375448|ref|ZP_07668023.1| putative PPE family protein [Myc... 737 0.0 gi|306780716|ref|ZP_07419053.1| PPE family protein [Mycobacteriu... 736 0.0 gi|289745139|ref|ZP_06504517.1| PPE family protein [Mycobacteriu... 709 0.0 gi|1076016|pir||C49930 hypothetical protein (uraA 3' region) - M... 707 0.0 gi|289442830|ref|ZP_06432574.1| PPE family protein [Mycobacteriu... 693 0.0 gi|289749941|ref|ZP_06509319.1| PPE family protein [Mycobacteriu... 649 0.0 gi|15827195|ref|NP_301458.1| PPE-family protein [Mycobacterium l... 637 2e-180 gi|254550400|ref|ZP_05140847.1| PPE family protein [Mycobacteriu... 547 2e-153 gi|240171483|ref|ZP_04750142.1| PPE-family protein [Mycobacteriu... 438 1e-120 gi|183981440|ref|YP_001849731.1| PPE family protein [Mycobacteri... 387 4e-105 gi|340625478|ref|YP_004743930.1| PPE family protein [Mycobacteri... 380 3e-103 gi|31791631|ref|NP_854124.1| PPE family protein [Mycobacterium b... 378 2e-102 gi|15839841|ref|NP_334878.1| PPE family protein [Mycobacterium t... 378 2e-102 gi|148821650|ref|YP_001286404.1| PPE family protein [Mycobacteri... 376 5e-102 gi|148660218|ref|YP_001281741.1| PPE family protein [Mycobacteri... 374 3e-101 gi|308369395|ref|ZP_07666728.1| PPE family protein [Mycobacteriu... 331 2e-88 gi|57116714|ref|YP_177709.1| PPE family protein [Mycobacterium t... 329 8e-88 gi|306780717|ref|ZP_07419054.1| PPE family protein [Mycobacteriu... 327 2e-87 gi|308374005|ref|ZP_07667693.1| PPE family protein [Mycobacteriu... 305 1e-80 gi|308371672|ref|ZP_07425776.2| putative PPE family protein [Myc... 303 4e-80 gi|212596198|gb|ACJ35559.1| PPE36 [Mycobacterium avium subsp. av... 297 4e-78 gi|323720106|gb|EGB29211.1| PPE family protein [Mycobacterium tu... 295 2e-77 gi|118464979|ref|YP_883484.1| PPE family protein [Mycobacterium ... 290 4e-76 gi|333990903|ref|YP_004523517.1| PPE family protein [Mycobacteri... 273 8e-71 gi|183980566|ref|YP_001848857.1| PPE family protein, PPE3 [Mycob... 271 2e-70 gi|308394982|ref|ZP_07491871.2| putative PPE family protein [Myc... 270 4e-70 gi|118616916|ref|YP_905248.1| PPE family protein [Mycobacterium ... 270 6e-70 gi|308369355|ref|ZP_07417457.2| PPE family protein [Mycobacteriu... 269 8e-70 gi|308379739|ref|ZP_07487374.2| putative PPE family protein [Myc... 268 2e-69 gi|289441660|ref|ZP_06431404.1| PPE family protein [Mycobacteriu... 265 2e-68 gi|339293339|gb|AEJ45450.1| PPE family protein [Mycobacterium tu... 265 2e-68 gi|306792809|ref|ZP_07431111.1| hypothetical protein TMEG_01291 ... 265 2e-68 gi|289445819|ref|ZP_06435563.1| PPE family protein [Mycobacteriu... 264 2e-68 gi|289748051|ref|ZP_06507429.1| PPE family protein [Mycobacteriu... 264 2e-68 gi|339630355|ref|YP_004721997.1| PPE family protein [Mycobacteri... 264 3e-68 gi|313657070|ref|ZP_07813950.1| PPE family protein [Mycobacteriu... 264 3e-68 gi|31791459|ref|NP_853952.1| PPE family protein [Mycobacterium b... 264 3e-68 gi|339296987|gb|AEJ49097.1| PPE family protein [Mycobacterium tu... 264 3e-68 gi|297729743|ref|ZP_06958861.1| PPE family protein [Mycobacteriu... 264 4e-68 gi|254549227|ref|ZP_05139674.1| PPE family protein [Mycobacteriu... 264 4e-68 >gi|15840845|ref|NP_335882.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|57116858|ref|YP_177806.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661178|ref|YP_001282701.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 38 more sequence titles Length=539 Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/539 (100%), Positives = 539/539 (100%), Gaps = 0/539 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK Sbjct 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 Query 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA Sbjct 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 Query 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR Sbjct 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 >gi|31792581|ref|NP_855074.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121637317|ref|YP_977540.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989792|ref|YP_002644479.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618170|emb|CAD94283.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121492964|emb|CAL71435.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772905|dbj|BAH25711.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601336|emb|CCC64009.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=539 Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 538/539 (99%), Gaps = 0/539 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQH VIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHAVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK Sbjct 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 Query 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA Sbjct 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 Query 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR Sbjct 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 >gi|289757493|ref|ZP_06516871.1| PPE family protein [Mycobacterium tuberculosis T85] gi|294994947|ref|ZP_06800638.1| PPE family protein [Mycobacterium tuberculosis 210] gi|289713057|gb|EFD77069.1| PPE family protein [Mycobacterium tuberculosis T85] gi|326903009|gb|EGE49942.1| PPE family protein [Mycobacterium tuberculosis W-148] gi|339294366|gb|AEJ46477.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] gi|339298003|gb|AEJ50113.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=539 Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 539/539 (100%), Gaps = 0/539 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVAS+GWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASDGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK Sbjct 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 Query 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA Sbjct 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 Query 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR Sbjct 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 >gi|298524892|ref|ZP_07012301.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] gi|298494686|gb|EFI29980.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] Length=539 Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 539/539 (100%), Gaps = 0/539 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK Sbjct 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 Query 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 AAASDSAAAESAAQASARAQAR+ARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA Sbjct 421 AAASDSAAAESAAQASARAQARSARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 Query 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR Sbjct 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 >gi|289574053|ref|ZP_06454280.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538484|gb|EFD43062.1| PPE family protein [Mycobacterium tuberculosis K85] Length=539 Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 538/539 (99%), Gaps = 0/539 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK Sbjct 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 Query 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA Sbjct 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 Query 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 R SDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR Sbjct 481 RVSDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 >gi|340626401|ref|YP_004744853.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004591|emb|CCC43735.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=539 Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 538/539 (99%), Gaps = 0/539 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK Sbjct 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 Query 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA Sbjct 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 Query 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLA DDFGGGPTMPMMPGTWTHDQGVFDEHR Sbjct 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLASDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 >gi|289569402|ref|ZP_06449629.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289543156|gb|EFD46804.1| PPE family protein [Mycobacterium tuberculosis T17] Length=539 Score = 1071 bits (2771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 538/539 (99%), Gaps = 0/539 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK Sbjct 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 Query 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGA 480 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAA APEHQPGA Sbjct 421 AAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAALAPEHQPGA 480 Query 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR Sbjct 481 RASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 >gi|306792808|ref|ZP_07431110.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308338770|gb|EFP27621.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] Length=395 Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/395 (100%), Positives = 395/395 (100%), Gaps = 0/395 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFG 395 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFG Sbjct 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFG 395 >gi|306784116|ref|ZP_07422438.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308331183|gb|EFP20034.1| PPE family protein [Mycobacterium tuberculosis SUMu003] Length=383 Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/383 (100%), Positives = 383/383 (100%), Gaps = 0/383 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAAAAGAT 383 PAVAAPGMLPASAPAPAAAAGAT Sbjct 361 PAVAAPGMLPASAPAPAAAAGAT 383 >gi|308371955|ref|ZP_07426806.2| putative PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308334938|gb|EFP23789.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] gi|323720140|gb|EGB29244.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=378 Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/378 (100%), Positives = 378/378 (100%), Gaps = 0/378 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLPASAPAPAA 378 PAVAAPGMLPASAPAPAA Sbjct 361 PAVAAPGMLPASAPAPAA 378 >gi|308375448|ref|ZP_07668023.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308346310|gb|EFP35161.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007] Length=457 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/370 (99%), Positives = 368/370 (99%), Gaps = 0/370 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGMLP 370 PAVAAPG P Sbjct 361 PAVAAPGHAP 370 >gi|306780716|ref|ZP_07419053.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308326460|gb|EFP15311.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=368 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/366 (100%), Positives = 366/366 (100%), Gaps = 0/366 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAP 366 PAVAAP Sbjct 361 PAVAAP 366 >gi|289745139|ref|ZP_06504517.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289685667|gb|EFD53155.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=503 Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/369 (100%), Positives = 369/369 (100%), Gaps = 0/369 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 Query 361 PAVAAPGML 369 PAVAAPGML Sbjct 361 PAVAAPGML 369 >gi|1076016|pir||C49930 hypothetical protein (uraA 3' region) - Mycobacterium bovis (strain BCG) (fragment) Length=501 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/471 (88%), Positives = 415/471 (89%), Gaps = 22/471 (4%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 42 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 101 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEA VAAYMPFLAWLIQASADCVEMAAQQH VIEAYTAAVELMPTQVELAANQIKLA Sbjct 102 GQAAEALVAAYMPFLAWLIQASADCVEMAAQQHAVIEAYTAAVELMPTQVELAANQIKLA 161 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 162 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 221 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 222 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 281 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 282 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 341 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG Sbjct 342 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 401 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPY-----------LVGGGGPGI 409 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGG P +G GP Sbjct 402 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGLPALPGRRWRPRNRVRLGTVGPRQ 461 Query 410 GFGSGQSAHAKAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEF 460 G G A A + A G KARGHRDEF Sbjct 462 GRGVRFRCSRVGGPGLGACAGACCTA-----------GPLGGKARGHRDEF 501 >gi|289442830|ref|ZP_06432574.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289415749|gb|EFD12989.1| PPE family protein [Mycobacterium tuberculosis T46] Length=457 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/342 (100%), Positives = 342/342 (100%), Gaps = 0/342 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVP 342 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVP Sbjct 301 QYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVP 342 >gi|289749941|ref|ZP_06509319.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289690528|gb|EFD57957.1| PPE family protein [Mycobacterium tuberculosis T92] Length=316 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/316 (100%), Positives = 316/316 (100%), Gaps = 0/316 (0%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ Sbjct 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA Sbjct 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD Sbjct 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD Sbjct 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG Sbjct 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 Query 301 QYPQLLSAALTGVIAH 316 QYPQLLSAALTGVIAH Sbjct 301 QYPQLLSAALTGVIAH 316 >gi|15827195|ref|NP_301458.1| PPE-family protein [Mycobacterium leprae TN] gi|221229673|ref|YP_002503089.1| PPE-family protein [Mycobacterium leprae Br4923] gi|13092743|emb|CAC30047.1| PPE-family protein [Mycobacterium leprae] gi|219932780|emb|CAR70632.1| PPE-family protein [Mycobacterium leprae Br4923] Length=538 Score = 637 bits (1642), Expect = 2e-180, Method: Compositional matrix adjust. Identities = 364/543 (68%), Positives = 417/543 (77%), Gaps = 9/543 (1%) Query 1 MTEPWIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQ 60 MT PW+AFPPEV SAMLN+GAGVGPML SA+ N LSA+Y ASEVE LL V S GWQ Sbjct 1 MTNPWMAFPPEVQSAMLNFGAGVGPMLNSASYNLWLSAEYRWVASEVEALLREVRSGGWQ 60 Query 61 GQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLA 120 GQA E FV + MPFLAWL++A+AD +++A QQ VV AY AAVE MPTQ ELAAN++ Sbjct 61 GQAVEMFVGSCMPFLAWLMKAAADYMDVATQQEVVAAAYAAAVEAMPTQFELAANRVVRG 120 Query 121 VLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSD 180 VL+ATNFFG+NTIPIA+NE EYV+MWVRAATTMATYS +S+SAL+A P +PPPLILKS+ Sbjct 121 VLMATNFFGVNTIPIALNEEEYVQMWVRAATTMATYSAISQSALAATPQATPPPLILKSN 180 Query 181 ELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYD 240 L+ D +DS H GHSHGGHA +D FA+ILR VS GR+VWDP+NGTLNGLDYD Sbjct 181 VLVDDVEKDS-----RHDGHSHGGHASAMDRVFADILRNVSGGRLVWDPLNGTLNGLDYD 235 Query 241 DYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLG 300 DYVYPG IWWLARGLEFFQDGEQF ELLF NPT AFQFLLY+VV+DLPTHI Q+ TWL Sbjct 236 DYVYPGQPIWWLARGLEFFQDGEQFWELLFINPTAAFQFLLYIVVLDLPTHIVQLGTWLA 295 Query 301 QYPQLLSAALTGVIAHLGAITGLAGL-SGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGV 359 +YPQLL AL G IA+LGA+TGLAGL SGLSA PSAAIP VVPE P+A P MLA AGV Sbjct 296 EYPQLLLVALGGTIANLGAVTGLAGLSSGLSAGPSAAIPTVVPESAPIATVPAMLAGAGV 355 Query 360 GPAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSG-QSAH 418 PAV APG P+SA PA+AA A AA P PP TGFGGF PYLV G GPG+GFGSG QSA+ Sbjct 356 APAVVAPGASPSSAAPPASAASAAAAAPAPPGTGFGGFSPYLVDGRGPGVGFGSGRQSAY 415 Query 419 AKAAAS--DSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEH 476 A + +A AA ++ + A R RSAAK RG+R+E +TM+ GFDAA P+P Sbjct 416 ANKVSESVSDSAVAEAAAQASAREQARAWRRRSAAKERGYREEVITMNTGFDAAIPSPVD 475 Query 477 QPGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFD 536 Q G+R SDCGAG GFAGTV KEAVV+ AGLTTLAGDDFGGGPTMPM+PGTW + D Sbjct 476 QTGSRVSDCGAGSFGFAGTVSKEAVVEVAGLTTLAGDDFGGGPTMPMVPGTWAPARESSD 535 Query 537 EHR 539 E R Sbjct 536 EGR 538 >gi|254550400|ref|ZP_05140847.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=266 Score = 547 bits (1409), Expect = 2e-153, Method: Compositional matrix adjust. Identities = 265/266 (99%), Positives = 266/266 (100%), Gaps = 0/266 (0%) Query 12 VHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAAEAFVAAY 71 +HSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAAEAFVAAY Sbjct 1 MHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAAEAFVAAY 60 Query 72 MPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVATNFFGIN 131 MPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVATNFFGIN Sbjct 61 MPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVATNFFGIN 120 Query 132 TIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLPDTGEDSD 191 TIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLPDTGEDSD Sbjct 121 TIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLPDTGEDSD 180 Query 192 EDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVYPGHAIWW 251 EDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVYPGHAIWW Sbjct 181 EDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVYPGHAIWW 240 Query 252 LARGLEFFQDGEQFGELLFTNPTGAF 277 LARGLEFFQDGEQFGELLFTNPTGAF Sbjct 241 LARGLEFFQDGEQFGELLFTNPTGAF 266 >gi|240171483|ref|ZP_04750142.1| PPE-family protein [Mycobacterium kansasii ATCC 12478] Length=535 Score = 438 bits (1127), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 294/546 (54%), Positives = 352/546 (65%), Gaps = 22/546 (4%) Query 1 MTEP-WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGW 59 MT P W+A PPEVHSA+LN G G P+L +A LS +YA A+E+ LL V + W Sbjct 1 MTAPVWLASPPEVHSALLNSGPGPEPLLTAAAGWSSLSDEYAAVAAELGTLLAAVQAGVW 60 Query 60 QGQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKL 119 +G +A+AFVAAY P+LAWL QASAD A + + AYTAA+ MPT ELAAN Sbjct 61 RGPSADAFVAAYGPYLAWLAQASADTATAATRHETLAAAYTAALAAMPTLPELAANHASH 120 Query 120 AVLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKS 179 A LVATNFFGINTIPIA+NEA+Y+ MW++AATTMATY +S SA++++P T P P ILKS Sbjct 121 AGLVATNFFGINTIPIALNEADYLRMWIQAATTMATYQAISGSAVTSIPQTGPAPPILKS 180 Query 180 DELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDY 239 + ++G+ D GHA IDN AEIL+ +S GRI+WDP NGTLNGL Y Sbjct 181 NTPAQESGKAGDS-----------GHATPIDNLIAEILKVISGGRIIWDPANGTLNGLPY 229 Query 240 DDYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWL 299 D Y PG IWWLAR LEFFQDGE+F LLFTNP AF+FL ++V DLPTHI QI TWL Sbjct 230 DAYTNPGQPIWWLARALEFFQDGEEFWRLLFTNPVAAFEFLFGILVFDLPTHIMQIVTWL 289 Query 300 GQYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGV 359 Q PQLL+ AL IA LGA TG AGL+GL+A AAIP PE PV P L AG+ Sbjct 290 AQSPQLLAVALGQTIATLGAATGFAGLAGLTATQIAAIPVPGPE--PVLMLPMTLPGAGI 347 Query 360 GPAV-AAPGMLPASAPAPAAAAGATAAGPTP-PATGFGGFPPYLVGGGGPGIGFGSGQS- 416 P + A A A APA AAG A+ P P PA G GFPP++V GGP IG S S Sbjct 348 APTLSTATASATAPAAAPAPAAGIVASTPAPTPAAGIEGFPPFVV--GGPTIGSDSRLST 405 Query 417 -AHAKAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPE 475 A K A+DSAAA +AAQAS R +ARA RR R+ A RGHRDEF M++ D AAP P+ Sbjct 406 RARTKEPATDSAAAAAAAQASDRREARARRRRRTPAGERGHRDEFAEMELDGDLAAPRPD 465 Query 476 HQPGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWT--HDQG 533 Q + AS GAGP+G GT R + +V+AAG TL G G G MPM+PGTW D G Sbjct 466 EQQVSGASAWGAGPLGSRGTARTQTLVEAAGFATLDGSGLGDGARMPMIPGTWNAKADNG 525 Query 534 VFDEHR 539 + H Sbjct 526 TDNPHH 531 >gi|183981440|ref|YP_001849731.1| PPE family protein [Mycobacterium marinum M] gi|183174766|gb|ACC39876.1| PPE family protein [Mycobacterium marinum M] Length=527 Score = 387 bits (993), Expect = 4e-105, Method: Compositional matrix adjust. Identities = 261/540 (49%), Positives = 330/540 (62%), Gaps = 31/540 (5%) Query 1 MTEP-WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGW 59 MT P W+A PPEVHSA+L+ G G GP+L +A +LS +YA AA+E+ +LG V + W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLSAAAAWSQLSNEYASAANELTAMLGAVQAGPW 60 Query 60 QGQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKL 119 +G +AE +VAA++P++AWL+QAS D + AAQ AYT A+ MPT ELA N Sbjct 61 EGSSAEQYVAAHLPYVAWLMQASVDTTQAAAQLETAAAAYTTALAAMPTLPELATNHTIH 120 Query 120 AVLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKS 179 A L ATNFFGINTIPI +NEA+YV MW++AATTM+TY VS +AL++ P T+P P ILKS Sbjct 121 AALTATNFFGINTIPITLNEADYVRMWIQAATTMSTYQAVSGTALASTPQTAPAPYILKS 180 Query 180 DELLPDTG---EDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNG 236 + D+ E SD +D+ A+ILR ++ GR+ WDPV+ T+NG Sbjct 181 NAQTEDSQPPVEGSDP----------------LDSLVADILRAITDGRVNWDPVSRTVNG 224 Query 237 LDYDDYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIA 296 ++Y++Y G +WW+ R LEF QD F LL T+P A QF + + D P HI Q+ Sbjct 225 IEYEEYTDAGDPVWWVVRALEFSQDFRTFARLLPTDPQAALQFYGELFLFDYPVHIPQLL 284 Query 297 TWLGQYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAV 356 TWL Q PQLL+ AL ++ LGA+TG AGL+GL+A P I V L PVAA ML V Sbjct 285 TWLSQSPQLLAVALGQAVSGLGAVTGFAGLAGLAAQP---IGTVASALGPVAAPADMLPV 341 Query 357 AGVGPAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFP---PYLVGGGGPGIGFGS 413 + P V P P SA APA A TA GP P GG PYL+ GGGP IGFGS Sbjct 342 TSMAPTVTTPVAAPVSATAPAPATALTAGGPPPVPPAAGGAGFSYPYLI-GGGPSIGFGS 400 Query 414 GQSAHAKAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPA 473 G S A A+A E A+A A+ RA R R A RG+ DEF+ +++ D AP Sbjct 401 GMSTSASASAKKK-TPEPDTAAAAAARERARARRRRRATLRGYGDEFMDIEVDPDWGAP- 458 Query 474 PEHQPGAR--ASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHD 531 P PGA ASD GAGP+G AGTV +V AAGLTTL GDDF G P MPM+PGTW D Sbjct 459 PGEGPGASTVASDHGAGPVGIAGTVHTGSVTPAAGLTTLGGDDFDGEPRMPMLPGTWDPD 518 >gi|340625478|ref|YP_004743930.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003668|emb|CCC42791.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=518 Score = 380 bits (976), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 261/539 (49%), Positives = 334/539 (62%), Gaps = 35/539 (6%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G GP+L +AT L +YA A E+ LL V + WQG +A Sbjct 7 WMASPPEVHSALLSSGPGPGPVLAAATGWSSLGREYAAVAEELGALLAAVQAGVWQGPSA 66 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 E+F AA +P+L+WL QASADC AA+ V AY AA+ MPT ELAAN +VA Sbjct 67 ESFAAACLPYLSWLTQASADCAAAAARLEAVTAAYAAALVAMPTLAELAANHATHGAMVA 126 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+YV MW++AATTMATY V+ SA+ ++P + PPP ILKS+ Sbjct 127 TNFFGINTIPIAVNEADYVRMWLQAATTMATYQAVADSAVRSIPDSVPPPRILKSNAQ-- 184 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 H ++ G A +D+F AEIL+ ++ GR++WDP GT+NGL YD Y Sbjct 185 ----------SQHSSSNNSGGADPVDDFIAEILKIITGGRVIWDPEAGTVNGLPYDAYTN 234 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 PG +WW+AR LE QD ++F +LLFTNP AFQFL+ +++ D PTH+ Q+ATWL + PQ Sbjct 235 PGTLMWWIARSLELLQDFQEFAKLLFTNPVKAFQFLVDLILFDWPTHMLQLATWLAENPQ 294 Query 305 LLSAALTGVIAHLGAITGLAGLSGL----SAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 LL AALT I+ LG ++GLAGL+GL +P+ A AVV + P+A Sbjct 295 LLVAALTPAISGLGGVSGLAGLTGLVPQPPVVPAPAPDAVVSTVLPLAGTATPTTAPASA 354 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PA A P +A+ T+AG GFPPYLV G GPGI F +G A ++ Sbjct 355 PAAGAAPGPPTGTATATSASVPTSAG---------GFPPYLV-GSGPGIDFDAGTPAGSR 404 Query 421 AA--ASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQP 478 A A+D+ A +AAQ SAR QAR R R+AAK RG+ DEFV MD G A P +P Sbjct 405 RAQPAADNVTAVAAAQVSARQQARRRR--RAAAKERGNADEFVDMDSG---PAIPPSGEP 459 Query 479 GARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDE 537 A AS+ G G +GFAGT E V AGLTTLA D+F GP MPM+PG W D G +D Sbjct 460 DAWASNSGVGGLGFAGTASNETVAAPAGLTTLADDEFQCGPRMPMLPGAW--DLGTWDR 516 >gi|31791631|ref|NP_854124.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116732|ref|YP_177727.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121636367|ref|YP_976590.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 50 more sequence titles Length=518 Score = 378 bits (970), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 263/539 (49%), Positives = 336/539 (63%), Gaps = 35/539 (6%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G GP+L +AT L +YA A E+ LL V + WQG +A Sbjct 7 WMASPPEVHSALLSSGPGPGPVLAAATGWSSLGREYAAVAEELGALLAAVQAGVWQGPSA 66 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 E+F AA +P+L+WL QASADC AA+ V AY AA+ MPT ELAAN +VA Sbjct 67 ESFAAACLPYLSWLTQASADCAAAAARLEAVTAAYAAALVAMPTLAELAANHATHGAMVA 126 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+YV MW++AATTMATY V+ SA+ ++P + PPP ILKS+ Sbjct 127 TNFFGINTIPIAVNEADYVRMWLQAATTMATYQAVADSAVRSIPDSVPPPRILKSNAQ-- 184 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 H ++ G A +D+F AEIL+ ++ GR++WDP GT+NGL YD Y Sbjct 185 ----------SQHSSSNNSGGADPVDDFIAEILKIITGGRVIWDPEAGTVNGLPYDAYTN 234 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 PG +WW+AR LE QD ++F +LLFTNP AFQFL+ +++ D PTH+ Q+ATWL + PQ Sbjct 235 PGTLMWWIARSLELLQDFQEFAKLLFTNPVKAFQFLVDLILFDWPTHMLQLATWLAENPQ 294 Query 305 LLSAALTGVIAHLGAITGLAGLSGL----SAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 LL AALT I+ LGA++GLAGL+GL +P+ A AVVP + P+A Sbjct 295 LLVAALTPAISGLGAVSGLAGLTGLVPQPPVVPAPAPDAVVPTVLPLAGTATPTTAPASA 354 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PA A PA +A+ T+AG GFPPYLV G GPGI F +G A ++ Sbjct 355 PAAGAAPGPPAGTATATSASVPTSAG---------GFPPYLV-GSGPGIDFDAGTPAGSR 404 Query 421 AA--ASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQP 478 A A+D+ A +AAQ SAR QAR R R+AAK RG+ DEFV MD G A P + Sbjct 405 RAQPAADNVTAVAAAQVSARHQARRRR--RAAAKERGNADEFVDMDSG---PAIPPSGER 459 Query 479 GARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDE 537 A AS+ G G +GFAGT E V AGLTTLA D+F GP MPM+PG W D G +D Sbjct 460 DAWASNSGVGGLGFAGTASNETVAAPAGLTTLADDEFQCGPRMPMLPGAW--DLGTWDR 516 >gi|15839841|ref|NP_334878.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|254230800|ref|ZP_04924127.1| PPE family protein [Mycobacterium tuberculosis C] gi|254363417|ref|ZP_04979463.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|13879974|gb|AAK44692.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|124599859|gb|EAY58869.1| PPE family protein [Mycobacterium tuberculosis C] gi|134148931|gb|EBA40976.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|323721125|gb|EGB30187.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=518 Score = 378 bits (970), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 263/539 (49%), Positives = 336/539 (63%), Gaps = 35/539 (6%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G GP+L +AT L +YA A E+ LL V + WQG +A Sbjct 7 WMASPPEVHSALLSSGPGPGPVLAAATGWSSLGREYAAVAEELGALLAAVQAGVWQGPSA 66 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 E+F AA +P+L+WL QASADC AA+ V AY AA+ MPT ELAAN +VA Sbjct 67 ESFAAACLPYLSWLTQASADCAAAAARLEAVTAAYAAALVAMPTLAELAANHATHGAMVA 126 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+YV MW++AATTMATY V+ SA+ ++P + PPP ILKS+ Sbjct 127 TNFFGINTIPIAVNEADYVRMWLQAATTMATYQAVADSAVRSIPDSVPPPRILKSNAQ-- 184 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 H ++ G A +D+F AEIL+ ++ GR++WDP GT+NGL YD Y Sbjct 185 ----------SQHSSSNNSGGADPVDDFIAEILKIITGGRVIWDPEAGTVNGLPYDAYTN 234 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 PG +WW+AR LE QD ++F +LLFTNP AFQFL+ +++ D PTH+ Q+ATWL + PQ Sbjct 235 PGTLMWWIARSLELLQDFQEFAKLLFTNPVKAFQFLVDLILFDWPTHMLQLATWLAENPQ 294 Query 305 LLSAALTGVIAHLGAITGLAGLSGL----SAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 LL AALT I+ LGA++GLAGL+GL +P+ A AVVP + P+A Sbjct 295 LLVAALTPAISGLGAVSGLAGLTGLVPQPPVVPAPAPDAVVPTVLPLAGTATPTTAPASA 354 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PA A PA +A+ T+AG GFPPYLV G GPGI F +G A ++ Sbjct 355 PAAGAAPGPPAGTATATSASVPTSAG---------GFPPYLV-GSGPGIDFDAGTPAGSR 404 Query 421 AA--ASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQP 478 A A+D+ A +AAQ SAR QAR R R+AAK RG+ DEFV MD G A P + Sbjct 405 RAQPAADNVTAVAAAQVSARHQARRCR--RAAAKERGNADEFVDMDSG---PAIPPSGER 459 Query 479 GARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDE 537 A AS+ G G +GFAGT E V AGLTTLA D+F GP MPM+PG W D G +D Sbjct 460 DAWASNSGVGGLGFAGTASNETVAAPAGLTTLADDEFQCGPRMPMLPGAW--DLGTWDR 516 >gi|148821650|ref|YP_001286404.1| PPE family protein [Mycobacterium tuberculosis F11] gi|148720177|gb|ABR04802.1| PPE family protein [Mycobacterium tuberculosis F11] Length=518 Score = 376 bits (966), Expect = 5e-102, Method: Compositional matrix adjust. Identities = 262/539 (49%), Positives = 336/539 (63%), Gaps = 35/539 (6%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G GP+L +AT L +YA A E+ LL V + WQG +A Sbjct 7 WMASPPEVHSALLSSGPGPGPVLAAATGWSSLGREYAAVAEELGALLAAVQAGVWQGPSA 66 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 E+F AA +P+L+WL QASADC AA+ V AY AA+ MPT ELAAN +VA Sbjct 67 ESFAAACLPYLSWLTQASADCAAAAARLEAVTAAYAAALVAMPTLAELAANHATHGAMVA 126 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+YV MW++AATTMATY V+ SA+ ++P + PPP ILKS+ Sbjct 127 TNFFGINTIPIAVNEADYVRMWLQAATTMATYQAVADSAVRSIPDSVPPPRILKSNAQ-- 184 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 H ++ G A +D+F AEIL+ ++ GR++WDP GT+NGL YD Y Sbjct 185 ----------SQHSSSNNSGGADPVDDFIAEILKIITGGRVIWDPEAGTVNGLPYDAYTN 234 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 PG +WW+AR LE QD ++F +LLFTNP AFQFL+ +++ D PTH+ Q+ATWL + PQ Sbjct 235 PGTLMWWIARSLELLQDFQEFAKLLFTNPVKAFQFLVDLILFDWPTHMLQLATWLAENPQ 294 Query 305 LLSAALTGVIAHLGAITGLAGLSGL----SAIPSAAIPAVVPELTPVAAAPPMLAVAGVG 360 LL AALT I+ LGA++GLAGL+GL +P+ A AVVP + P+A Sbjct 295 LLVAALTPAISGLGAVSGLAGLTGLVPQPPVVPAPAPDAVVPTVLPLAGTATPTTAPASA 354 Query 361 PAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAK 420 PA A PA +A+ T+AG GFPPYLV G GPGI F +G A ++ Sbjct 355 PAAGAAPGPPAGTATATSASVPTSAG---------GFPPYLV-GSGPGIDFDAGTPAGSR 404 Query 421 AA--ASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQP 478 A A+D+ A +AAQ SAR QAR R R+AAK RG+ DEFV MD G A P + Sbjct 405 RAQPAADNVTAVAAAQVSARHQARRRR--RAAAKERGNADEFVDMDSG---PAIPPSGER 459 Query 479 GARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDE 537 A AS+ G G +GFAGT E V AGLTTLA D+F GP MP++PG W D G +D Sbjct 460 DAWASNSGVGGLGFAGTASNETVAAPAGLTTLADDEFQCGPRMPVLPGAW--DLGTWDR 516 >gi|148660218|ref|YP_001281741.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|167970729|ref|ZP_02553006.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|254549399|ref|ZP_05139846.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297632936|ref|ZP_06950716.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|148504370|gb|ABQ72179.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=511 Score = 374 bits (960), Expect = 3e-101, Method: Compositional matrix adjust. Identities = 262/538 (49%), Positives = 335/538 (63%), Gaps = 35/538 (6%) Query 6 IAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAAE 65 +A PPEVHSA+L+ G G GP+L +AT L +YA A E+ LL V + WQG +AE Sbjct 1 MASPPEVHSALLSSGPGPGPVLAAATGWSSLGREYAAVAEELGALLAAVQAGVWQGPSAE 60 Query 66 AFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVAT 125 +F AA +P+L+WL QASADC AA+ V AY AA+ MPT ELAAN +VAT Sbjct 61 SFAAACLPYLSWLTQASADCAAAAARLEAVTAAYAAALVAMPTLAELAANHATHGAMVAT 120 Query 126 NFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLPD 185 NFFGINTIPIA+NEA+YV MW++AATTMATY V+ SA+ ++P + PPP ILKS+ Sbjct 121 NFFGINTIPIAVNEADYVRMWLQAATTMATYQAVADSAVRSIPDSVPPPRILKSNAQ--- 177 Query 186 TGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVYP 245 H ++ G A +D+F AEIL+ ++ GR++WDP GT+NGL YD Y P Sbjct 178 ---------SQHSSSNNSGGADPVDDFIAEILKIITGGRVIWDPEAGTVNGLPYDAYTNP 228 Query 246 GHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQL 305 G +WW+AR LE QD ++F +LLFTNP AFQFL+ +++ D PTH+ Q+ATWL + PQL Sbjct 229 GTLMWWIARSLELLQDFQEFAKLLFTNPVKAFQFLVDLILFDWPTHMLQLATWLAENPQL 288 Query 306 LSAALTGVIAHLGAITGLAGLSGL----SAIPSAAIPAVVPELTPVAAAPPMLAVAGVGP 361 L AALT I+ LGA++GLAGL+GL +P+ A AVVP + P+A P Sbjct 289 LVAALTPAISGLGAVSGLAGLTGLVPQPPVVPAPAPDAVVPTVLPLAGTATPTTAPASAP 348 Query 362 AVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAKA 421 A A PA +A+ T+AG GFPPYLV G GPGI F +G A ++ Sbjct 349 AAGAAPGPPAGTATATSASVPTSAG---------GFPPYLV-GSGPGIDFDAGTPAGSRR 398 Query 422 A--ASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPG 479 A A+D+ A +AAQ SAR QAR R R+AAK RG+ DEFV MD G A P + Sbjct 399 AQPAADNVTAVAAAQVSARHQARRRR--RAAAKERGNADEFVDMDSG---PAIPPSGERD 453 Query 480 ARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDE 537 A AS+ G G +GFAGT E V AGLTTLA D+F GP MPM+PG W D G +D Sbjct 454 AWASNSGVGGLGFAGTASNETVAAPAGLTTLADDEFQCGPRMPMLPGAW--DLGTWDR 509 >gi|308369395|ref|ZP_07666728.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308327742|gb|EFP16593.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=494 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 239/510 (47%), Positives = 309/510 (61%), Gaps = 26/510 (5%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G GP+L +AT L +YA A E+ LL V + WQG +A Sbjct 7 WMASPPEVHSALLSSGPGPGPVLAAATGWSSLGREYAAVAEELGALLAAVQAGVWQGPSA 66 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 E+F AA +P+L+WL QASADC AA+ V AY AA+ MPT ELAAN +VA Sbjct 67 ESFAAACLPYLSWLTQASADCAAAAARLEAVTAAYAAALVAMPTLAELAANHATHGAMVA 126 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+YV MW++AATTMATY V+ SA+ ++P + PPP ILKS+ Sbjct 127 TNFFGINTIPIAVNEADYVRMWLQAATTMATYQAVADSAVRSIPDSVPPPRILKSNAQ-- 184 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 H ++ G A +D+F AEIL+ ++ GR++WDP GT+NGL YD Y Sbjct 185 ----------SQHSSSNNSGGADPVDDFIAEILKIITGGRVIWDPEAGTVNGLPYDAYTN 234 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 PG +WW+AR LE QD ++F +LLFTNP AFQFL+ +++ D PTH+ Q+ATWL + PQ Sbjct 235 PGTLMWWIARSLELLQDFQEFAKLLFTNPVKAFQFLVDLILFDWPTHMLQLATWLAENPQ 294 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPMLAVAGVGPAVA 364 LL AALT I+ LGA++GLAGL+GL +PA P+ P + Sbjct 295 LLVAALTPAISGLGAVSGLAGLTGLVPQ-PPVVPAPAPDAVVPTVLPLAGTATPTTAPAS 353 Query 365 APGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAKAA-- 422 AP A P A +A+ PT GGFPPYLV G GPGI F +G A ++ A Sbjct 354 APAAGAAPGPPAGTATATSASVPT----SAGGFPPYLV-GSGPGIDFDAGTPAGSRRAQP 408 Query 423 ASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGARA 482 A+D+ A +AAQ SAR QAR R R+AAK RG+ DEFV MD G A P + A A Sbjct 409 AADNVTAVAAAQVSARHQARRRR--RAAAKERGNADEFVDMDSG---PAIPPSGERDAWA 463 Query 483 SDCGAGPIGFAGTVRKEAVVKAAGLTTLAG 512 S+ G G +G RK+ +AG AG Sbjct 464 SNSGVGGLGVCRH-RKQRDGGSAGRIDHAG 492 >gi|57116714|ref|YP_177709.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148660046|ref|YP_001281569.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|81415811|sp|Q79FY8.1|PPE03_MYCTU RecName: Full=Uncharacterized PPE family protein PPE3 gi|41352754|emb|CAE55264.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148504198|gb|ABQ72007.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=536 Score = 329 bits (843), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 256/541 (48%), Positives = 321/541 (60%), Gaps = 33/541 (6%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 4 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 63 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 64 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 123 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 124 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 178 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 179 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 234 AAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI------PSAAIPAVVPELTPVAAAPPMLAVAG 358 LL+ AL VI++LGA+TG AGLSGL+ + A + A L VA AP M A Sbjct 294 LLAVALGSVISNLGAVTGFAGLSGLAGMQPAAIPALAPVAAAPSTLPAVAMAPTMAAPGA 353 Query 359 VGPAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAH 418 + AAP PA++ A+ A P P A GFG PY + PGIGFGSG SA Sbjct 354 AVASAAAPASAPAAS---TVASATPAPPPAPGAAGFGY--PYAI--APPGIGFGSGMSAS 406 Query 419 A----KAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAA-APA 473 A KA DSAAA +AA A R RG+ DEF+ M++ D P Sbjct 407 ASAQRKAPQPDSAAAAAAAAAVRDQARARR---RRRVTRRGYGDEFMDMNIDVDPDWGPP 463 Query 474 PEHQP--GARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHD 531 P P ASD GAG +GFAGT R+EAV AAG+TTLAGDDFG GPT PM+PG+W D Sbjct 464 PGEDPVTSTVASDRGAGHLGFAGTARREAVADAAGMTTLAGDDFGDGPTTPMVPGSWDPD 523 Query 532 Q 532 + Sbjct 524 R 524 >gi|306780717|ref|ZP_07419054.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308326430|gb|EFP15281.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=168 Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%) Query 372 SAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAKAAASDSAAAES 431 SAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAKAAASDSAAAES Sbjct 1 SAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAHAKAAASDSAAAES 60 Query 432 AAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGARASDCGAGPIG 491 AAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGARASDCGAGPIG Sbjct 61 AAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPEHQPGARASDCGAGPIG 120 Query 492 FAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 FAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR Sbjct 121 FAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWTHDQGVFDEHR 168 >gi|308374005|ref|ZP_07667693.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308395451|ref|ZP_07669338.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308343361|gb|EFP32212.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308367368|gb|EFP56219.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012] Length=487 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 170/325 (53%), Positives = 222/325 (69%), Gaps = 12/325 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G GP+L +AT L +YA A E+ LL V + WQG +A Sbjct 7 WMASPPEVHSALLSSGPGPGPVLAAATGWSSLGREYAAVAEELGALLAAVQAGVWQGPSA 66 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 E+F AA +P+L+WL QASADC AA+ V AY AA+ MPT ELAAN +VA Sbjct 67 ESFAAACLPYLSWLTQASADCAAAAARLEAVTAAYAAALVAMPTLAELAANHATHGAMVA 126 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+YV MW++AATTMATY V+ SA+ ++P + PPP ILKS+ Sbjct 127 TNFFGINTIPIAVNEADYVRMWLQAATTMATYQAVADSAVRSIPDSVPPPRILKSNA--- 183 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 H ++ G A +D+F AEIL+ ++ GR++WDP GT+NGL YD Y Sbjct 184 ---------QSQHSSSNNSGGADPVDDFIAEILKIITGGRVIWDPEAGTVNGLPYDAYTN 234 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 PG +WW+AR LE QD ++F +LLFTNP AFQFL+ +++ D PTH+ Q+ATWL + PQ Sbjct 235 PGTLMWWIARSLELLQDFQEFAKLLFTNPVKAFQFLVDLILFDWPTHMLQLATWLAENPQ 294 Query 305 LLSAALTGVIAHLGAITGLAGLSGL 329 LL AALT I+ LGA++GLAGL+GL Sbjct 295 LLVAALTPAISGLGAVSGLAGLTGL 319 >gi|308371672|ref|ZP_07425776.2| putative PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308335919|gb|EFP24770.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] Length=352 Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 170/325 (53%), Positives = 222/325 (69%), Gaps = 12/325 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G GP+L +AT L +YA A E+ LL V + WQG +A Sbjct 7 WMASPPEVHSALLSSGPGPGPVLAAATGWSSLGREYAAVAEELGALLAAVQAGVWQGPSA 66 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 E+F AA +P+L+WL QASADC AA+ V AY AA+ MPT ELAAN +VA Sbjct 67 ESFAAACLPYLSWLTQASADCAAAAARLEAVTAAYAAALVAMPTLAELAANHATHGAMVA 126 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+YV MW++AATTMATY V+ SA+ ++P + PPP ILKS+ Sbjct 127 TNFFGINTIPIAVNEADYVRMWLQAATTMATYQAVADSAVRSIPDSVPPPRILKSNA--- 183 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 H ++ G A +D+F AEIL+ ++ GR++WDP GT+NGL YD Y Sbjct 184 ---------QSQHSSSNNSGGADPVDDFIAEILKIITGGRVIWDPEAGTVNGLPYDAYTN 234 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 PG +WW+AR LE QD ++F +LLFTNP AFQFL+ +++ D PTH+ Q+ATWL + PQ Sbjct 235 PGTLMWWIARSLELLQDFQEFAKLLFTNPVKAFQFLVDLILFDWPTHMLQLATWLAENPQ 294 Query 305 LLSAALTGVIAHLGAITGLAGLSGL 329 LL AALT I+ LGA++GLAGL+GL Sbjct 295 LLVAALTPAISGLGAVSGLAGLTGL 319 >gi|212596198|gb|ACJ35559.1| PPE36 [Mycobacterium avium subsp. avium] Length=529 Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 233/541 (44%), Positives = 295/541 (55%), Gaps = 25/541 (4%) Query 1 MTEP-WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGW 59 MT P W+A PPEVHSA+L+ G G + +A L A+YA AA E+ LL + W Sbjct 7 MTAPIWMASPPEVHSALLSSGPGPASVFAAAAAWSALGAEYASAAEELSGLLASAQAGAW 66 Query 60 QGQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKL 119 QG +AE++VAA+ P+LAWL +ASA AAQ AYTAA+ MPT ELAAN Sbjct 67 QGPSAESYVAAHGPYLAWLTRASAHSAAAAAQHETAGTAYTAALAAMPTLPELAANHAVH 126 Query 120 AVLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKS 179 LVATNFFGINTIPIA+NEA+Y MWV+AA TMATY VS +A++A+P P P ILKS Sbjct 127 GALVATNFFGINTIPIAVNEADYARMWVQAAGTMATYQAVSTAAVAAVPQPDPAPSILKS 186 Query 180 DELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDY 239 D D+ H G ++ F A+ILR I WDPV GTLNGL Y Sbjct 187 -----TAAHDHDDHEHGDDHDHDHGFDSPLNQFVAQILRLFG---IDWDPVEGTLNGLPY 238 Query 240 DDYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWL 299 + Y P +WW+ R LE F D +QFG LL NP AFQF+ +V++D PTH+AQ+A+WL Sbjct 239 EAYTSPADPLWWVVRALELFSDFQQFGALLQENPAAAFQFITELVLLDWPTHLAQLASWL 298 Query 300 GQYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPML-AVAG 358 PQLL A GA+ G AG++G +P+ V TP AAAP L A AG Sbjct 299 PTQPQLLLVPALVAAAPFGALAGFAGVAGQPPLPA----PVAEPATPSAAAPTGLPATAG 354 Query 359 VGPAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAH 418 P A+ + AA ++ P P PG+GFGS A Sbjct 355 ATPIAASAAASVPAPTPAPTAATVSSPAPPAPPAPGAAPFAPPYAVAPPGVGFGSKARAS 414 Query 419 AKAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPE-HQ 477 A A + + A A R A R ++R DEF+ M++G D P+ + Sbjct 415 VDARAKSKSPQPDSNAVGAGAAVREAAHARRRQRSRRRGDEFMDMNVGVD-----PDWDE 469 Query 478 PGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWT----HDQG 533 P AS GAG +GFAGT +E V AAGLT LAGD+FGGG MP++PG+W D G Sbjct 470 PATTASPRGAGNLGFAGTAPRE-TVAAAGLTQLAGDEFGGGAGMPLLPGSWAPPDPRDSG 528 Query 534 V 534 V Sbjct 529 V 529 >gi|323720106|gb|EGB29211.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=148 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 148/148 (100%), Positives = 148/148 (100%), Gaps = 0/148 (0%) Query 392 TGFGGFPPYLVGGGGPGIGFGSGQSAHAKAAASDSAAAESAAQASARAQARAARRGRSAA 451 TGFGGFPPYLVGGGGPGIGFGSGQSAHAKAAASDSAAAESAAQASARAQARAARRGRSAA Sbjct 1 TGFGGFPPYLVGGGGPGIGFGSGQSAHAKAAASDSAAAESAAQASARAQARAARRGRSAA 60 Query 452 KARGHRDEFVTMDMGFDAAAPAPEHQPGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLA 511 KARGHRDEFVTMDMGFDAAAPAPEHQPGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLA Sbjct 61 KARGHRDEFVTMDMGFDAAAPAPEHQPGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLA 120 Query 512 GDDFGGGPTMPMMPGTWTHDQGVFDEHR 539 GDDFGGGPTMPMMPGTWTHDQGVFDEHR Sbjct 121 GDDFGGGPTMPMMPGTWTHDQGVFDEHR 148 >gi|118464979|ref|YP_883484.1| PPE family protein [Mycobacterium avium 104] gi|118166266|gb|ABK67163.1| PPE family protein [Mycobacterium avium 104] Length=529 Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 227/541 (42%), Positives = 293/541 (55%), Gaps = 25/541 (4%) Query 1 MTEP-WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGW 59 MT P W+A PPEVHSA+L+ G G + +A L A+YA AA E+ LL + W Sbjct 7 MTAPIWMASPPEVHSALLSSGPGPASVFAAAAAWSALGAEYASAAEELSGLLASAQAGAW 66 Query 60 QGQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKL 119 QG +A ++VAA+ P+LAWL +ASA AAQ AYTAA+ MPT ELAAN Sbjct 67 QGPSAASYVAAHGPYLAWLTRASAHSAAAAAQHETAGTAYTAALAAMPTLPELAANHAVH 126 Query 120 AVLVATNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKS 179 LVATNFFGINTIPIA+NEA+Y MWV+AA TMATY VS +A++A+P P P IL+S Sbjct 127 GALVATNFFGINTIPIAVNEADYARMWVQAAGTMATYQAVSTAAVAAVPQPDPAPSILRS 186 Query 180 DELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDY 239 D D+ H G ++ F A+ILR I WDPV GTLNGL Y Sbjct 187 -----TAAHDHDDHEHGDDHDHDHGFDSPLNQFVAQILRLFG---IDWDPVEGTLNGLPY 238 Query 240 DDYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWL 299 + Y P +WW+ R LE F D +QFG LL NP AFQF+ +V++D PTH+AQ+A+WL Sbjct 239 EAYTSPADPLWWVVRALELFSDFQQFGALLQENPAAAFQFITELVLLDWPTHLAQLASWL 298 Query 300 GQYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAAPPML-AVAG 358 PQLL A GA+ G AG++G +P+ V TP AAAP L A AG Sbjct 299 PTQPQLLLVPALVAAAPFGALAGFAGVAGQPPLPA----PVAEPATPSAAAPTGLPATAG 354 Query 359 VGPAVAAPGMLPASAPAPAAAAGATAAGPTPPATGFGGFPPYLVGGGGPGIGFGSGQSAH 418 P A+ + AA ++ P P PG+GFGS A Sbjct 355 ATPIAASAAASVPAPTPAPTAATVSSPAPPAPPAPGAAPFAPPYAVPPPGVGFGSKARAS 414 Query 419 AKAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMGFDAAAPAPE-HQ 477 A + + A + R A R ++R +EF+ M++G D P+ + Sbjct 415 VDTRAKSKSPQPDSNAVGAGSAVREAAHARRRQRSRRRGEEFMDMNVGVD-----PDWDE 469 Query 478 PGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPGTWT----HDQG 533 P AS GAG +GFAGT +E V AAG+T LAGD+FGGG MP++PG+W D G Sbjct 470 PATTASPRGAGNLGFAGTAPRE-TVAAAGMTQLAGDEFGGGAGMPLLPGSWAPPDPRDSG 528 Query 534 V 534 V Sbjct 529 V 529 >gi|333990903|ref|YP_004523517.1| PPE family protein [Mycobacterium sp. JDM601] gi|333486871|gb|AEF36263.1| PPE family protein [Mycobacterium sp. JDM601] Length=487 Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 215/503 (43%), Positives = 286/503 (57%), Gaps = 27/503 (5%) Query 36 LSAQYAEAASEVEELLGVVASEGWQGQAAEAFVAAYMPFLAWLIQASADCVEMAAQQHVV 95 + A+Y EAA E+ LLG V + WQG AE++V A+ P+L+WL A+AD AA V Sbjct 1 MGAEYTEAADELMALLGAVQAGAWQGPGAESYVMAHAPYLSWLRGAAADSAAAAAGHETV 60 Query 96 IEAYTAAVELMPTQVELAANQIKLAVLVATNFFGINTIPIAINEAEYVEMWVRAATTMAT 155 AY +A+ MPT ELAAN + L+ATNFFG+N IPIA+NEA+YV MWV+AATTM+ Sbjct 61 AGAYLSALSTMPTLPELAANHVSHGALLATNFFGLNAIPIALNEADYVRMWVQAATTMSV 120 Query 156 YSTVSRSALSAMPHTSPPPLILKSDELLPDTGEDSDEDGHNHGGHSHGGHARMIDNFFAE 215 Y VS +A+++ P P P ILK+D G+D D + +D A+ Sbjct 121 YQAVSGAAVASTPQPLPAPPILKADA---PRGDDEGTDPTVN---------DPLDQLIAQ 168 Query 216 ILRGVSAGRIVWDPVNGTLNGLDYDDYVYPGHAIWWLARGLEFFQDGEQFGELLFTNPTG 275 +L+ S G++ WDP + +NG+ YD YV P ++WL R LE F+D +Q G NP Sbjct 169 LLQTASNGQVNWDPAHAMVNGIPYDQYVDPNQPLFWLVRALELFEDFQQLGVNFQQNPAL 228 Query 276 AFQFLLYVVVVDLPTHIAQIATWLGQYPQLLSAALTGVIAHLGAITGLAGLSGLSAIPS- 334 AFQ+L+ + D PTHIA+IATW+GQ PQL +A L V+A +GA+ GLAGL+GL+ +P Sbjct 229 AFQYLVQLAEFDWPTHIAEIATWVGQSPQLFAAVLGVVVAPVGAVGGLAGLTGLAGLPQS 288 Query 335 -AAIPAVVP-----ELTPVAAAPPMLAVAGVGPAVAAPGMLPASAPAPAAAAGATAAGPT 388 A+IPA EL + PP AV+G A A +PA A +A A GP Sbjct 289 GASIPAPPSGPGGHELPAIGTVPPAPAVSGTVSASAPAPPVPAGVAAGSAPA---LIGP- 344 Query 389 PPATGFGGFPPYLVGGGGPGIGFGSGQSAHAKAAASDSAAAESAAQASARAQARAARRGR 448 PPA G PPYL+GG G G G G +A A AS+ +A +AA A + RA R R Sbjct 345 PPAAGATFVPPYLIGGPGIGSGSGMAAAARAARKASEPDSAAAAAAAREAERRRAQARRR 404 Query 449 SAAKARGHRDEFVTMDMGFDAAAPAPEHQPGARASDCGAGPIGFAGTVRKEAVVKAAGLT 508 A RGH +F+TM +G P+ P A+D G G +GFAG AAG+ Sbjct 405 RRAAKRGHAGQFMTMGVGVAPEWQLPDDDPA--AADRGTGTLGFAGNA-ANGRSTAAGMA 461 Query 509 TLAGDDFGGGPTMPMMPGTWTHD 531 L G FG GP PM+PG+W D Sbjct 462 RLDG-AFGNGPRQPMVPGSWDAD 483 >gi|183980566|ref|YP_001848857.1| PPE family protein, PPE3 [Mycobacterium marinum M] gi|183173892|gb|ACC39002.1| PPE family protein, PPE3 [Mycobacterium marinum M] Length=522 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 167/330 (51%), Positives = 215/330 (66%), Gaps = 12/330 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W A PPEVHSA+L+ G G +L A LS +YA A E+ +L V W+G +A Sbjct 6 WFASPPEVHSALLSSGPGPASLLSGAAAWAGLSTEYASVADELMGVLAAVQGGAWEGLSA 65 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 E +VAA++P+L WL++ASA + AAQ AYT A+ MPT ELAAN + VL+A Sbjct 66 ELYVAAHVPYLMWLMRASATSAQAAAQHEAAAAAYTTALAAMPTMPELAANHVIHGVLMA 125 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA NEA+YV MW++AATTM+TY VS +A+++ P ++P P IL + Sbjct 126 TNFFGINTIPIAANEADYVRMWIQAATTMSTYQAVSAAAVASTPPSTPAPRILAAPAA-- 183 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 + H HGG ID F AE+LR +S GRI+WDP GT+NG+ YDDYV Sbjct 184 ----------AHDHDHDHGGDPTPIDYFVAEVLRIISGGRIIWDPAEGTVNGIPYDDYVN 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWWL R LEF QD + F + LFTNP GA +F++ +V+ D PTHIAQI L Q PQ Sbjct 234 AAQPIWWLVRALEFGQDFQTFIKELFTNPIGAIEFMVELVLFDWPTHIAQIIQALAQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAIPS 334 LL+ AL GV+A+LGAI+GLAGLSGL+ + S Sbjct 294 LLAVALGGVVANLGAISGLAGLSGLAGLHS 323 >gi|308394982|ref|ZP_07491871.2| putative PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308367519|gb|EFP56370.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012] Length=377 Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 171/342 (50%), Positives = 220/342 (65%), Gaps = 10/342 (2%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 43 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 102 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 103 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 162 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL ++ Sbjct 163 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAAEAADD 222 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D D HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 223 DHDHDH----------DHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 272 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 273 AAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 332 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTP 346 LL+ AL VI++LGA+TG AGLSGL+ + AAIPA+ P P Sbjct 333 LLAVALGSVISNLGAVTGFAGLSGLAGMQPAAIPALAPSRRP 374 >gi|118616916|ref|YP_905248.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118569026|gb|ABL03777.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=518 Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 166/330 (51%), Positives = 214/330 (65%), Gaps = 12/330 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W PPEVHSA+L+ G G +L A LS +YA A E+ +L V W+G +A Sbjct 2 WFTSPPEVHSALLSSGPGPASLLSGAAAWAGLSTEYASVADELMGVLAAVQGGAWEGLSA 61 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 E +VAA++P+L WL++ASA + AAQ AYT A+ MPT ELAAN + VL+A Sbjct 62 ELYVAAHVPYLMWLMRASATSAQAAAQHEAAAAAYTTALAAMPTMPELAANHVIHGVLMA 121 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA NEA+YV MW++AATTM+TY VS +A+++ P ++P P IL + Sbjct 122 TNFFGINTIPIAANEADYVRMWIQAATTMSTYQAVSAAAVASTPPSTPAPRILAAPAA-- 179 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 + H HGG ID F AE+LR +S GRI+WDP GT+NG+ YDDYV Sbjct 180 ----------AHDHDHDHGGDPTPIDYFVAEVLRIISGGRIIWDPAEGTVNGIPYDDYVN 229 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWWL R LEF QD + F + LFTNP GA +F++ +V+ D PTHIAQI L Q PQ Sbjct 230 AAQPIWWLVRALEFGQDFQTFIKELFTNPIGAIEFMVELVLFDWPTHIAQIIQALAQSPQ 289 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAIPS 334 LL+ AL GV+A+LGAI+GLAGLSGL+ + S Sbjct 290 LLAVALGGVVANLGAISGLAGLSGLAGLHS 319 >gi|308369355|ref|ZP_07417457.2| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308327906|gb|EFP16757.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=393 Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 175/346 (51%), Positives = 223/346 (65%), Gaps = 14/346 (4%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 43 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 102 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 103 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 162 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL ++ Sbjct 163 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAAEAADD 222 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D D HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 223 DHDHDH----------DHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 272 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 273 AAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 332 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVPELTPVAAA 350 LL+ AL VI++LGA+TG AGLSGL+ + AAIPA L PVAAA Sbjct 333 LLAVALGSVISNLGAVTGFAGLSGLAGMQPAAIPA----LAPVAAA 374 >gi|308379739|ref|ZP_07487374.2| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308363850|gb|EFP52701.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=370 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 170/338 (51%), Positives = 219/338 (65%), Gaps = 10/338 (2%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 43 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 102 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 103 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 162 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 163 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 217 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 218 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 272 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 273 AAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 332 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAIPSAAIPAVVP 342 LL+ AL VI++LGA+TG AGLSGL+ + AAIPA+ P Sbjct 333 LLAVALGSVISNLGAVTGFAGLSGLAGMQPAAIPALAP 370 >gi|289441660|ref|ZP_06431404.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289414579|gb|EFD11819.1| PPE family protein [Mycobacterium tuberculosis T46] Length=536 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 214/328 (66%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 4 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 63 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 64 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 123 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL ++ Sbjct 124 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAAEA--- 180 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D ++ H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 181 -------ADDDHYHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 234 AAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 294 LLAVALGSVISNLGAVTGFAGLSGLAGM 321 >gi|339293339|gb|AEJ45450.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=536 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 213/328 (65%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 4 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 63 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 64 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 123 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW++AA+TMATY V+ +A+++ P T+P P IL + Sbjct 124 TNFFGINTIPIALNEADYARMWMQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 178 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 179 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 234 AAQPIWWVVRAIEFSKDFETFVQKLFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 294 LLAVALGSVISNLGAVTGFAGLSGLAGM 321 >gi|306792809|ref|ZP_07431111.1| hypothetical protein TMEG_01291 [Mycobacterium tuberculosis SUMu005] gi|308338737|gb|EFP27588.1| hypothetical protein TMEG_01291 [Mycobacterium tuberculosis SUMu005] Length=133 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 133/133 (100%), Positives = 133/133 (100%), Gaps = 0/133 (0%) Query 407 PGIGFGSGQSAHAKAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMG 466 PGIGFGSGQSAHAKAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMG Sbjct 1 PGIGFGSGQSAHAKAAASDSAAAESAAQASARAQARAARRGRSAAKARGHRDEFVTMDMG 60 Query 467 FDAAAPAPEHQPGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPG 526 FDAAAPAPEHQPGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPG Sbjct 61 FDAAAPAPEHQPGARASDCGAGPIGFAGTVRKEAVVKAAGLTTLAGDDFGGGPTMPMMPG 120 Query 527 TWTHDQGVFDEHR 539 TWTHDQGVFDEHR Sbjct 121 TWTHDQGVFDEHR 133 >gi|289445819|ref|ZP_06435563.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289418777|gb|EFD15978.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=536 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 212/328 (65%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 4 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 63 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 64 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 123 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 124 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 178 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 179 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 234 AAQPIWWVVRAIEFSKDFETFVQKLFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 294 LLAVALGSVISNLGAVTGFAGLSGLAGM 321 >gi|289748051|ref|ZP_06507429.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289688579|gb|EFD56067.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=536 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 212/328 (65%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 4 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 63 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 64 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 123 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 124 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 178 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 179 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 234 AAQPIWWVVRAIEFSKDFETFVQKLFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 294 LLAVALGSVISNLGAVTGFAGLSGLAGM 321 >gi|339630355|ref|YP_004721997.1| PPE family protein [Mycobacterium africanum GM041182] gi|339329711|emb|CCC25354.1| PPE family protein [Mycobacterium africanum GM041182] Length=536 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 212/328 (65%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 4 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 63 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 64 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 123 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 124 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 178 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 179 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 234 AAQPIWWVVRAIEFSKDFETFVQKLFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 294 LLAVALGSVISNLGAVTGFAGLSGLAGM 321 >gi|313657070|ref|ZP_07813950.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=536 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 212/328 (65%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 4 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 63 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 64 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 123 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 124 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 178 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 179 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 234 AAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 294 LLAVALGSVISNLGAVTGFAGLSGLAGM 321 >gi|31791459|ref|NP_853952.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121636195|ref|YP_976418.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148821478|ref|YP_001286232.1| PPE family protein [Mycobacterium tuberculosis F11] 10 more sequence titles Length=536 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 212/328 (65%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 4 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 63 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 64 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 123 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 124 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 178 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 179 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 234 AAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 294 LLAVALGSVISNLGAVTGFAGLSGLAGM 321 >gi|339296987|gb|AEJ49097.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=575 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 212/328 (65%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 43 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 102 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 103 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 162 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 163 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 217 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 218 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 272 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 273 AAQPIWWVVRAIEFSKDFETFVQKLFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 332 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 333 LLAVALGSVISNLGAVTGFAGLSGLAGM 360 >gi|297729743|ref|ZP_06958861.1| PPE family protein [Mycobacterium tuberculosis KZN R506] Length=536 Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 212/328 (65%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 4 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 63 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 64 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 123 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 124 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 178 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 179 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 233 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 234 AAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 293 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 294 LLAVALGSVISNLGAVTGFAGLSGLAGM 321 >gi|254549227|ref|ZP_05139674.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297632768|ref|ZP_06950548.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=541 Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 212/328 (65%), Gaps = 10/328 (3%) Query 5 WIAFPPEVHSAMLNYGAGVGPMLISATQNGELSAQYAEAASEVEELLGVVASEGWQGQAA 64 W+A PPEVHSA+L+ G G G +L +A LSA+YA A E+ LLG V + WQG +A Sbjct 9 WMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAEYAAVADELIGLLGAVQTGAWQGPSA 68 Query 65 EAFVAAYMPFLAWLIQASADCVEMAAQQHVVIEAYTAAVELMPTQVELAANQIKLAVLVA 124 A+VAA+ P+LAWL++AS E AA+ V AYT AV MPT VELAAN VLVA Sbjct 69 AAYVAAHAPYLAWLMRASETSAEAAARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVA 128 Query 125 TNFFGINTIPIAINEAEYVEMWVRAATTMATYSTVSRSALSAMPHTSPPPLILKSDELLP 184 TNFFGINTIPIA+NEA+Y MW +AA+TMATY V+ +A+++ P T+P P IL + Sbjct 129 TNFFGINTIPIALNEADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAA----- 183 Query 185 DTGEDSDEDGHNHGGHSHGGHARMIDNFFAEILRGVSAGRIVWDPVNGTLNGLDYDDYVY 244 D + H HGG +D AEILR +S GR++WDP GT+NG+ ++DY Sbjct 184 -----EAADDDHDHDHDHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD 238 Query 245 PGHAIWWLARGLEFFQDGEQFGELLFTNPTGAFQFLLYVVVVDLPTHIAQIATWLGQYPQ 304 IWW+ R +EF +D E F + LF NP AFQF +++ D PTHI QI L Q PQ Sbjct 239 AAQPIWWVVRAIEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIVQIVEALSQSPQ 298 Query 305 LLSAALTGVIAHLGAITGLAGLSGLSAI 332 LL+ AL VI++LGA+TG AGLSGL+ + Sbjct 299 LLAVALGSVISNLGAVTGFAGLSGLAGM 326 Lambda K H 0.317 0.132 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1186561841532 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40