BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1396c
Length=576
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116861|ref|YP_177809.1| PE-PGRS family protein [Mycobacteri... 945 0.0
gi|148661187|ref|YP_001282710.1| PE-PGRS family protein [Mycobac... 944 0.0
gi|148822616|ref|YP_001287370.1| PE-PGRS family protein [Mycobac... 942 0.0
gi|339294375|gb|AEJ46486.1| PE-PGRS family protein [Mycobacteriu... 937 0.0
gi|339631463|ref|YP_004723105.1| PE-PGRS family protein [Mycobac... 933 0.0
gi|254550410|ref|ZP_05140857.1| PE-PGRS family protein [Mycobact... 179 2e-42
gi|31792590|ref|NP_855083.1| PE-PGRS family protein [Mycobacteri... 179 2e-42
gi|326903018|gb|EGE49951.1| PE-PGRS family protein [Mycobacteriu... 177 3e-42
gi|253799554|ref|YP_003032555.1| PE-PGRS family protein [Mycobac... 177 3e-42
gi|340626410|ref|YP_004744862.1| PE-PGRS family protein [Mycobac... 177 4e-42
gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 155 3e-35
gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 154 3e-35
gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 152 1e-34
gi|339631132|ref|YP_004722774.1| PE-PGRS family protein [Mycobac... 143 8e-32
gi|121636997|ref|YP_977220.1| PE-PGRS family protein [Mycobacter... 141 3e-31
gi|31792259|ref|NP_854752.1| PE-PGRS family protein [Mycobacteri... 141 3e-31
gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 138 3e-30
gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 137 4e-30
gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 137 5e-30
gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [... 137 5e-30
gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacteri... 137 7e-30
gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 137 7e-30
gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 136 8e-30
gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [... 136 8e-30
gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 136 1e-29
gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 136 1e-29
gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 136 1e-29
gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobac... 136 1e-29
gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacteri... 136 1e-29
gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacteri... 136 1e-29
gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacter... 136 1e-29
gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacteri... 136 1e-29
gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 136 1e-29
gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobac... 136 1e-29
gi|254549533|ref|ZP_05139980.1| PE-PGRS family protein [Mycobact... 135 1e-29
gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobac... 135 1e-29
gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 135 3e-29
gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 134 3e-29
gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 134 4e-29
gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 134 6e-29
gi|340626079|ref|YP_004744531.1| PE-PGRS family protein [Mycobac... 129 1e-27
gi|183982067|ref|YP_001850358.1| PE-PGRS family protein [Mycobac... 129 1e-27
gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobac... 128 4e-27
gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobac... 127 5e-27
gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacteri... 127 6e-27
gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacter... 127 6e-27
gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacteri... 127 6e-27
gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobac... 127 7e-27
gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 127 8e-27
gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 126 1e-26
>gi|57116861|ref|YP_177809.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|38490267|emb|CAE55387.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=576
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/576 (100%), Positives = 576/576 (100%), Gaps = 0/576 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA
Sbjct 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
Query 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG
Sbjct 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
Query 181 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 240
AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD
Sbjct 181 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 240
Query 241 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR 300
GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR
Sbjct 241 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR 300
Query 301 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA 360
GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA
Sbjct 301 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA 360
Query 361 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 420
GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG
Sbjct 361 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 420
Query 421 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 480
TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG
Sbjct 421 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 480
Query 481 GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 540
GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG
Sbjct 481 GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 540
Query 541 NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 576
NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA
Sbjct 541 NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 576
>gi|148661187|ref|YP_001282710.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148505339|gb|ABQ73148.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=597
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/576 (100%), Positives = 576/576 (100%), Gaps = 0/576 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 22 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 81
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA
Sbjct 82 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 141
Query 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG
Sbjct 142 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 201
Query 181 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 240
AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD
Sbjct 202 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 261
Query 241 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR 300
GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR
Sbjct 262 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR 321
Query 301 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA 360
GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA
Sbjct 322 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA 381
Query 361 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 420
GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG
Sbjct 382 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 441
Query 421 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 480
TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG
Sbjct 442 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 501
Query 481 GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 540
GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG
Sbjct 502 GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 561
Query 541 NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 576
NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA
Sbjct 562 NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 597
>gi|148822616|ref|YP_001287370.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|294994958|ref|ZP_06800649.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
gi|148721143|gb|ABR05768.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|339298012|gb|AEJ50122.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
gi|344219226|gb|AEM99856.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=576
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/576 (99%), Positives = 575/576 (99%), Gaps = 0/576 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQAL TQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA
Sbjct 61 TYQALSTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
Query 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG
Sbjct 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
Query 181 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 240
AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD
Sbjct 181 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 240
Query 241 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR 300
GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR
Sbjct 241 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR 300
Query 301 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA 360
GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA
Sbjct 301 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA 360
Query 361 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 420
GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG
Sbjct 361 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 420
Query 421 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 480
TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG
Sbjct 421 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 480
Query 481 GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 540
GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG
Sbjct 481 GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 540
Query 541 NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 576
NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA
Sbjct 541 NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 576
>gi|339294375|gb|AEJ46486.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=576
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/576 (99%), Positives = 574/576 (99%), Gaps = 0/576 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQAL TQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIG+GA
Sbjct 61 TYQALSTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGNGA 120
Query 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG
Sbjct 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
Query 181 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 240
AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD
Sbjct 181 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 240
Query 241 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR 300
GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR
Sbjct 241 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR 300
Query 301 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA 360
GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA
Sbjct 301 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA 360
Query 361 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 420
GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG
Sbjct 361 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 420
Query 421 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 480
TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG
Sbjct 421 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 480
Query 481 GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 540
GRGGAAGLIGDAGTGGTGG GGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG
Sbjct 481 GRGGAAGLIGDAGTGGTGGNGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 540
Query 541 NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 576
NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA
Sbjct 541 NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 576
>gi|339631463|ref|YP_004723105.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330819|emb|CCC26490.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=576
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/576 (99%), Positives = 572/576 (99%), Gaps = 0/576 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQAL TQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA
Sbjct 61 TYQALSTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
Query 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG
Sbjct 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
Query 181 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 240
AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD
Sbjct 181 AGGWLWGNGGAGGNGGVGVAGDPGGVGGAGGAGGAAGLWGSGGSGGTGGQGGVGGGKSGD 240
Query 241 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGR 300
GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGG
Sbjct 241 GGTGGIGGAGGGGGWLHGDGGAGGHGGQGGTGVSSGGNGGAGGTGGDGRGLSGSGGAGGH 300
Query 301 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGNGGQGAISGAGGAGGNAWLIGDGGA 360
GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGG GGQGAISGAGGAGGNAWLIGDGGA
Sbjct 301 GGQTGVGGKVGENNFGGAGGAGGTGGLIGNGGAGGTGGQGAISGAGGAGGNAWLIGDGGA 360
Query 361 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 420
GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG
Sbjct 361 GGNGGDIRGQGGGAGGAGGAGGQLIGNGGTGGAGGTVTSPNGLGGAGGAGGSAGLIGHGG 420
Query 421 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 480
TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG
Sbjct 421 TGGAGGHSAQGPDGNGGIGGAGGAGGNGGQLYGTGGTGGTGGKGGDGFGVFGKGGAGGTG 480
Query 481 GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 540
GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG
Sbjct 481 GRGGAAGLIGDAGTGGTGGKGGTAGEDGTGGNGGTGGNGGAAVLIGNGGGGGAGGNGGAG 540
Query 541 NDGTPGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 576
NDGT GNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA
Sbjct 541 NDGTRGNGGGGGVGGTGGTLFGQPGQPGPPGQPGPA 576
>gi|254550410|ref|ZP_05140857.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=487
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQAL TQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA
Sbjct 61 TYQALSTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
Query 121 D 121
D
Sbjct 121 D 121
>gi|31792590|ref|NP_855083.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|121637326|ref|YP_977549.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989801|ref|YP_002644488.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31618179|emb|CAD94292.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121492973|emb|CAL71444.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772914|dbj|BAH25720.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601345|emb|CCC64018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=452
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQAL TQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA
Sbjct 61 TYQALSTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
Query 121 D 121
D
Sbjct 121 D 121
>gi|326903018|gb|EGE49951.1| PE-PGRS family protein [Mycobacterium tuberculosis W-148]
Length=577
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQAL TQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA
Sbjct 61 TYQALSTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
Query 121 D 121
D
Sbjct 121 D 121
>gi|253799554|ref|YP_003032555.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289554813|ref|ZP_06444023.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|253321057|gb|ACT25660.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289439445|gb|EFD21938.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|328459302|gb|AEB04725.1| hypothetical protein TBSG_02596 [Mycobacterium tuberculosis KZN
4207]
Length=414
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQAL TQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA
Sbjct 61 TYQALSTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
Query 121 D 121
D
Sbjct 121 D 121
>gi|340626410|ref|YP_004744862.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004600|emb|CCC43744.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=546
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ
Sbjct 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
TYQAL TQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA
Sbjct 61 TYQALSTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
Query 121 D 121
D
Sbjct 121 D 121
>gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=998
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/124 (65%), Positives = 91/124 (74%), Gaps = 1/124 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AATDLA IGS TA AAAA +VL A ADEVS AVAALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQ + Q A FH + VQTL++TA +Y +AEA NVEQ LL A+NAPT AL GRPLIG+GA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGAP 124
DG+P
Sbjct 120 DGSP 123
>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN
4207]
gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/124 (65%), Positives = 91/124 (74%), Gaps = 1/124 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AATDLA IGS TA AAAA +VL A ADEVS AVAALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQ + Q A FH + VQTL++TA +Y +AEA NVEQ LL A+NAPT AL GRPLIG+GA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGAP 124
DG+P
Sbjct 120 DGSP 123
>gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1425
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/157 (66%), Positives = 118/157 (76%), Gaps = 0/157 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF +P+ML AAA DLA IG+AI T + AAAA+TT +L A ADEVSAA+A+LF HA
Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQA+ QAA FH VQ L+ A YA+ E ANVEQ LLG INAPT AL GRPLIG+GA
Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVANVEQNLLGLINAPTQALFGRPLIGNGA 120
Query 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGA 157
DGA GTGQ G AGG+L+GNGG GGSGA GQ+GG GGA
Sbjct 121 DGAAGTGQTGQAGGLLWGNGGAGGSGAPGQSGGTGGA 157
>gi|339631132|ref|YP_004722774.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330488|emb|CCC26153.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=772
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/122 (70%), Positives = 99/122 (82%), Gaps = 0/122 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS++ A P+ML +AA DLASIGS+I+ + AAAAATTR+L A ADEVSA +AALFSGH +
Sbjct 7 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 66
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQA+ Q AAFH Q LTS+AGAYASAEA NVEQQ+LG INAPT ALLGRPLIG+GA
Sbjct 67 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 126
Query 121 DG 122
DG
Sbjct 127 DG 128
>gi|121636997|ref|YP_977220.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121492644|emb|CAL71113.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|341601013|emb|CCC63685.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=730
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/122 (69%), Positives = 98/122 (81%), Gaps = 0/122 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS++ A P+ML +AA DLASIGS+I+ + AAAAATTR+L A ADEVSA +AALFSGH +
Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQA+ Q AAFH Q LTS+AGAYASAEA NVEQQ+LG INAPT AL GRPLIG+GA
Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA 120
Query 121 DG 122
DG
Sbjct 121 DG 122
>gi|31792259|ref|NP_854752.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617847|emb|CAD93957.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=763
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/122 (69%), Positives = 98/122 (81%), Gaps = 0/122 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS++ A P+ML +AA DLASIGS+I+ + AAAAATTR+L A ADEVSA +AALFSGH +
Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQA+ Q AAFH Q LTS+AGAYASAEA NVEQQ+LG INAPT AL GRPLIG+GA
Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA 120
Query 121 DG 122
DG
Sbjct 121 DG 122
>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 88/122 (73%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA+D+A IGS+I AN+AAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 115 LI 116
LI
Sbjct 122 LI 123
>gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=805
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 88/122 (73%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA+D+A IGS+I AN+AAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ PEM+ AA+DL +GS IS AN AAA +TT +LAAGADEVSA +AALF HA
Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAA------NVEQQLLGAINAPTMALLGRP 114
YQA+ TQ + FH+Q VQTLT+ GAY++AE NVEQ LL +NAPT AL GRP
Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis
CCDC5079]
Length=742
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 88/122 (73%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA+D+A IGS+I AN+AAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 115 LI 116
LI
Sbjct 122 LI 123
>gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148661244|ref|YP_001282767.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441232|pir||G70917 hypothetical glycine-rich protein Rv1452c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490272|emb|CAE55391.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148505396|gb|ABQ73205.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=741
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 88/122 (73%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA+D+A IGS+I AN+AAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1399
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 87/122 (72%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA D+A IGS+I AN+AAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 87/122 (72%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA D+A IGS+I AN+AAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis
CCDC5180]
Length=742
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 88/122 (73%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA+D+A IGS+I AN+AAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 115 LI 116
LI
Sbjct 122 LI 123
>gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1408
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 87/122 (72%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA D+A IGS+I AN+AAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=1330
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 88/122 (73%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA+D+A IGS+I AN+AAA +TT VLAAGAD+VSAA+A LF HA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 115 LI 116
LI
Sbjct 122 LI 123
>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/123 (61%), Positives = 89/123 (73%), Gaps = 2/123 (1%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
M+F+ PEM+ AAA+DLA+IGSAI+TAN A AA T +LAAG DEVS A+A+LFSGHA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAE--AANVEQQLLGAINAPTMALLGRPLIGH 118
YQ+L + AFH Q V LT+ G Y+SAE AA Q LL +NAPT ALLGRPLIG
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 119 GAD 121
GAD
Sbjct 121 GAD 123
>gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504499|gb|ABQ72308.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1306
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/124 (64%), Positives = 90/124 (73%), Gaps = 1/124 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AATDLA IGS TA AAAA +VL A ADEVS AVAALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQ + Q A FH + VQTL++ A +Y +AEA NVEQ LL A+NAPT AL GRPLIG+GA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGAP 124
DG+P
Sbjct 120 DGSP 123
>gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617347|emb|CAD93455.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1306
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/124 (64%), Positives = 90/124 (73%), Gaps = 1/124 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AATDLA IGS TA AAAA +VL A ADEVS AVAALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQ + Q A FH + VQTL++ A +Y +AEA NVEQ LL A+NAPT AL GRPLIG+GA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGAP 124
DG+P
Sbjct 120 DGSP 123
>gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148821780|ref|YP_001286533.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|224988968|ref|YP_002643655.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
7 more sequence titles
Length=1306
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/124 (64%), Positives = 90/124 (73%), Gaps = 1/124 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AATDLA IGS TA AAAA +VL A ADEVS AVAALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQ + Q A FH + VQTL++ A +Y +AEA NVEQ LL A+NAPT AL GRPLIG+GA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGAP 124
DG+P
Sbjct 120 DGSP 123
>gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121492143|emb|CAL70608.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=1303
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/124 (64%), Positives = 90/124 (73%), Gaps = 1/124 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AATDLA IGS TA AAAA +VL A ADEVS AVAALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQ + Q A FH + VQTL++ A +Y +AEA NVEQ LL A+NAPT AL GRPLIG+GA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGAP 124
DG+P
Sbjct 120 DGSP 123
>gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13880121|gb|AAK44830.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1306
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/124 (64%), Positives = 90/124 (73%), Gaps = 1/124 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AATDLA IGS TA AAAA +VL A ADEVS AVAALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQ + Q A FH + VQTL++ A +Y +AEA NVEQ LL A+NAPT AL GRPLIG+GA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGAP 124
DG+P
Sbjct 120 DGSP 123
>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/123 (61%), Positives = 89/123 (73%), Gaps = 2/123 (1%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
M+F+ PEM+ AAA+DLA+IGSAI+TAN A AA T +LAAG DEVS A+A+LFSGHA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAE--AANVEQQLLGAINAPTMALLGRPLIGH 118
YQ+L + AFH Q V LT+ G Y+SAE AA Q LL +NAPT ALLGRPLIG
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 119 GAD 121
GAD
Sbjct 121 GAD 123
>gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224772970|dbj|BAH25776.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601401|emb|CCC64074.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=740
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/122 (59%), Positives = 87/122 (72%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA D+A IGS+I AN+AAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|254549533|ref|ZP_05139980.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=734
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/124 (64%), Positives = 90/124 (73%), Gaps = 1/124 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AATDLA IGS TA AAAA +VL A ADEVS AVAALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQ + Q A FH + VQTL++ A +Y +AEA NVEQ LL A+NAPT AL GRPLIG+GA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 121 DGAP 124
DG+P
Sbjct 120 DGSP 123
>gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178615|gb|ACC43725.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=723
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/164 (54%), Positives = 101/164 (62%), Gaps = 27/164 (16%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS+L PE+L +AATDL I SA+STAN AAA TT VLAAGADEVSAAVA+LF+G+ Q
Sbjct 1 MSYLLVTPELLTSAATDLEGIASALSTANLAAAVPTTGVLAAGADEVSAAVASLFAGYGQ 60
Query 61 TYQALRTQAAAFHQQIVQTL--------------TSTAGAYASAEAANVEQQLLGAINAP 106
YQ++ QA AF Q +Q + TS A+ E +LG INAP
Sbjct 61 AYQSISLQANAFQAQFIQAINGAGGAYAAAEAASTSPLQAF--------EDTVLGVINAP 112
Query 107 TMALLGRPLIGHGADGAPGT--GQAGGAGGILYGNGGNGGSGAT 148
T LLGRPLIG DGA GT GGAGG LYGNGGNG S T
Sbjct 113 TQTLLGRPLIG---DGAAGTAANPNGGAGGFLYGNGGNGFSQTT 153
>gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1660
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 89/124 (72%), Gaps = 2/124 (1%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS++ A PEM+ AA DLA IGS +S A+A AA TT V+AAGADEVSA +AALFS HAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN--VEQQLLGAINAPTMALLGRPLIGH 118
YQAL QAAAFH Q V TLT+ A Y + E AN + +LGA+NAPT LLGRPLIG
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAVLGAVNAPTQTLLGRPLIGD 120
Query 119 GADG 122
GA G
Sbjct 121 GAHG 124
>gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1644
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/124 (63%), Positives = 89/124 (72%), Gaps = 2/124 (1%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS++ A PEM+ AA DLA IGS +S A+A AA TT V+AAGADEVSA +AALFS HAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN--VEQQLLGAINAPTMALLGRPLIGH 118
YQAL QAAAFH Q V TLT+ A Y + E AN + +LGA+NAPT LLGRPLIG
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 119 GADG 122
GA G
Sbjct 121 GAHG 124
>gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1483
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 0/121 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ PEM+ AA DLA IGS+IS ANAAA A TT V+ A ADEVSAA+AALF HA+
Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQA+ Q+AAFH+++VQTL S A AY E AN +Q LL A+N PT A LGRPLIG+G
Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANAQQNLLNAVNGPTQAWLGRPLIGNGT 120
Query 121 D 121
D
Sbjct 121 D 121
>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/122 (58%), Positives = 87/122 (72%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE++ AAA+D+A IGS AN+ AA +TT VLAAGADEVSAA+A LF HA+
Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + VQTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
>gi|340626079|ref|YP_004744531.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004269|emb|CCC43410.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=767
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/186 (62%), Positives = 134/186 (73%), Gaps = 0/186 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS++ A P+ML +AA DLASIGS+I+ + AAAAATTR+L A ADEVSA +AALFSGH +
Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQA+ Q AAFH Q LTS+AGAYASAEA NVEQQ+LG INAPT ALLGRPL+G+GA
Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLVGNGA 120
Query 121 DGAPGTGQAGGAGGILYGNGGNGGSGATGQAGGAGGAAGLIGHGGAGGLGGTGASGGAGG 180
DG G G + G G GG GG+AGLIG+GG GG GG GA+GGAGG
Sbjct 121 DGTAANPNGGAGGLLYGNGGNGFSQTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGG 180
Query 181 AGGWLW 186
GGWL+
Sbjct 181 NGGWLY 186
>gi|183982067|ref|YP_001850358.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175393|gb|ACC40503.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=737
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/206 (58%), Positives = 131/206 (64%), Gaps = 25/206 (12%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS++ A PEML AATDLA IG+A+ +AN AAAA T VLAAGAD++SAAVAALFSGHA
Sbjct 1 MSYVIAAPEMLAGAATDLAGIGAALQSANGAAAAPITGVLAAGADDISAAVAALFSGHAL 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASA------EAANVEQQLLGAINAPTMALLGRP 114
YQAL TQ A FHQQ V L S +YA+A VEQQLLG INAPT ALLGRP
Sbjct 61 DYQALSTQMAGFHQQFVTALNSAGASYAAAEAASANPLQAVEQQLLGVINAPTQALLGRP 120
Query 115 LIGHGADGAPGTGQAGGAGGILYG-------------NGGNGGSGATGQAGGAGGAAGLI 161
LIG G GAPG Q GG GG+L+G GG+GGS GGAGGA
Sbjct 121 LIGDGTAGAPG--QNGGDGGLLWGNGGAGGVGTAAHPTGGSGGSAGLIGTGGAGGAGY-- 176
Query 162 GHGGAGGLGGTGASGGAGGAGGWLWG 187
G A G TG SGG GG GGWL+G
Sbjct 177 --GPAAQTGATGGSGGVGGTGGWLYG 200
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/53 (61%), Positives = 37/53 (70%), Gaps = 5/53 (9%)
Query 88 ASAEAANVEQQ---LLGAINAPTMALLGRPLIGHGADGAPGTGQAGGAGGILY 137
+SA AA + +LGAINAPT ALLGRPLIG GA GA GQ GG GG+L+
Sbjct 399 SSASAAPLYAVEQQVLGAINAPTQALLGRPLIGDGATGA--AGQNGGDGGLLW 449
>gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330487|emb|CCC26152.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=672
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/145 (68%), Positives = 107/145 (74%), Gaps = 1/145 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ P L AAA D+A IGSAIS ANAAA A T+ + AAGADEVSAAVAALFS HA
Sbjct 1 MSFVLVSPSQLMAAAADVAGIGSAISAANAAALAPTSVLAAAGADEVSAAVAALFSAHAG 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQ L +AA FH+Q VQ LT A AYASAEA NVEQQ+LG INAPT AL GRPLIG+GA
Sbjct 61 QYQQLGARAALFHEQFVQALTGAASAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA 120
Query 121 DGAPGTGQAGGAGGILYGNGGNGGS 145
DG GGAGG+LY NGGNG S
Sbjct 121 DGT-AANPNGGAGGLLYSNGGNGFS 144
>gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148507404|gb|ABQ75213.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=582
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/122 (67%), Positives = 89/122 (73%), Gaps = 0/122 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AAATDLA I SAIS A AAAAA T +V AAGADEVS A++ALF HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQAL QA FH Q VQ LTS YA+AE+ VEQ +L AINAPT L GRPLIG GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=750
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/122 (67%), Positives = 89/122 (73%), Gaps = 0/122 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AAATDLA I SAIS A AAAAA T +V AAGADEVS A++ALF HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQAL QA FH Q VQ LTS YA+AE+ VEQ +L AINAPT L GRPLIG GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991809|ref|YP_002646498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121494960|emb|CAL73446.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224774924|dbj|BAH27730.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=750
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/122 (67%), Positives = 89/122 (73%), Gaps = 0/122 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AAATDLA I SAIS A AAAAA T +V AAGADEVS A++ALF HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQAL QA FH Q VQ LTS YA+AE+ VEQ +L AINAPT L GRPLIG GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31620165|emb|CAD95608.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=749
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/122 (67%), Positives = 89/122 (73%), Gaps = 0/122 (0%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MSF+ A PEML AAATDLA I SAIS A AAAAA T +V AAGADEVS A++ALF HAQ
Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAANVEQQLLGAINAPTMALLGRPLIGHGA 120
YQAL QA FH Q VQ LTS YA+AE+ VEQ +L AINAPT L GRPLIG GA
Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120
Query 121 DG 122
+G
Sbjct 121 NG 122
>gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175981|gb|ACC41091.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=625
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/111 (71%), Positives = 86/111 (78%), Gaps = 2/111 (1%)
Query 16 TDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQTYQALRTQAAAFHQQ 75
TDLAS+GS+IS ANAAAAA T VLAAGADEVSA VAALF HAQ YQ+L QAA FH+Q
Sbjct 16 TDLASVGSSISAANAAAAAPTMSVLAAGADEVSAVVAALFDAHAQAYQSLSAQAALFHEQ 75
Query 76 IVQTLTSTAGAYASAEAANVE--QQLLGAINAPTMALLGRPLIGHGADGAP 124
VQ L + AG+YA AEAA+V Q L INAPT AL GRPLIG+GADGAP
Sbjct 76 FVQALNAGAGSYALAEAASVSPLQDALNLINAPTQALFGRPLIGNGADGAP 126
>gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN
1435]
gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN
4207]
Length=1408
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/122 (60%), Positives = 88/122 (73%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA+D+A IGS+I ANAAAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 115 LI 116
LI
Sbjct 122 LI 123
>gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=1329
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/122 (60%), Positives = 87/122 (72%), Gaps = 6/122 (4%)
Query 1 MSFLFAQPEMLGAAATDLASIGSAISTANAAAAAATTRVLAAGADEVSAAVAALFSGHAQ 60
MS + PE + AAA D+A IGS+I ANAAAA +TT VLAAGADEVSAA+A LF HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 TYQALRTQAAAFHQQIVQTLTSTAGAYASAEAAN------VEQQLLGAINAPTMALLGRP 114
YQA+ TQ AAFH + QTL++ G+Y SAEA N +E +L A+NAPT ALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 115 LI 116
LI
Sbjct 121 LI 122
Lambda K H
0.307 0.141 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1297990237818
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40