BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1404
Length=160
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608542|ref|NP_215920.1| transcriptional regulatory protein ... 317 5e-85
gi|15840862|ref|NP_335899.1| MarR family transcriptional regulat... 316 9e-85
gi|289574073|ref|ZP_06454300.1| transcriptional regulator [Mycob... 313 5e-84
gi|119390698|pdb|2NYX|A Chain A, Crystal Structure Of Rv1404 Fro... 305 1e-81
gi|289757510|ref|ZP_06516888.1| transcriptional regulatory prote... 288 2e-76
gi|183982226|ref|YP_001850517.1| transcriptional regulatory prot... 259 7e-68
gi|118617415|ref|YP_905747.1| transcriptional regulatory protein... 258 1e-67
gi|240172779|ref|ZP_04751438.1| transcriptional regulatory prote... 254 3e-66
gi|296170734|ref|ZP_06852307.1| MarR family transcriptional regu... 248 2e-64
gi|15827202|ref|NP_301465.1| marR family transcriptional regulat... 244 2e-63
gi|41407229|ref|NP_960065.1| hypothetical protein MAP1131 [Mycob... 241 3e-62
gi|342858681|ref|ZP_08715336.1| MarR family transcriptional regu... 241 3e-62
gi|254821960|ref|ZP_05226961.1| transcriptional regulator, MarR ... 239 7e-62
gi|169628116|ref|YP_001701765.1| MarR family transcriptional reg... 189 9e-47
gi|326385234|ref|ZP_08206899.1| transcriptional regulator [Gordo... 162 1e-38
gi|300787593|ref|YP_003767884.1| MarR family transcriptional reg... 155 2e-36
gi|256395564|ref|YP_003117128.1| MarR family transcriptional reg... 153 7e-36
gi|294633512|ref|ZP_06712071.1| MarR family transcriptional regu... 148 3e-34
gi|326781170|ref|ZP_08240435.1| transcriptional regulator, MarR ... 147 4e-34
gi|182440500|ref|YP_001828219.1| MarR family transcriptional reg... 146 1e-33
gi|291452361|ref|ZP_06591751.1| transcriptional regulator [Strep... 144 3e-33
gi|289767379|ref|ZP_06526757.1| transcriptional regulator [Strep... 141 3e-32
gi|21225479|ref|NP_631258.1| transcriptional regulator [Streptom... 141 3e-32
gi|329937298|ref|ZP_08286897.1| MarR family transcriptional regu... 141 4e-32
gi|302524980|ref|ZP_07277322.1| MarR family transcriptional regu... 140 4e-32
gi|290962218|ref|YP_003493400.1| MarR family transcriptional reg... 140 5e-32
gi|86741196|ref|YP_481596.1| MarR family transcriptional regulat... 140 8e-32
gi|345000747|ref|YP_004803601.1| MarR family transcriptional reg... 137 4e-31
gi|302544210|ref|ZP_07296552.1| MarR family transcriptional regu... 135 1e-30
gi|297194322|ref|ZP_06911720.1| transcriptional regulator [Strep... 134 3e-30
gi|329935488|ref|ZP_08285348.1| MarR family transcriptional regu... 134 4e-30
gi|256395866|ref|YP_003117430.1| MarR family transcriptional reg... 132 2e-29
gi|331698731|ref|YP_004334970.1| MarR family transcriptional reg... 124 6e-27
gi|297161373|gb|ADI11085.1| MarR family transcriptional regulato... 117 5e-25
gi|111025090|ref|YP_707510.1| MarR family transcriptional regula... 115 3e-24
gi|337762826|emb|CCB71534.1| putative MarR-family transcriptiona... 108 2e-22
gi|258653831|ref|YP_003202987.1| MarR family transcriptional reg... 105 3e-21
gi|324999817|ref|ZP_08120929.1| MarR family transcriptional regu... 102 3e-20
gi|108799610|ref|YP_639807.1| MarR family transcriptional regula... 100 5e-20
gi|258650646|ref|YP_003199802.1| MarR family transcriptional reg... 99.8 1e-19
gi|331696095|ref|YP_004332334.1| MarR family transcriptional reg... 99.0 2e-19
gi|152968194|ref|YP_001363978.1| MarR family transcriptional reg... 95.5 2e-18
gi|258653838|ref|YP_003202994.1| MarR family transcriptional reg... 93.6 8e-18
gi|145594942|ref|YP_001159239.1| regulatory protein MarR [Salini... 89.7 1e-16
gi|324998233|ref|ZP_08119345.1| MarR family transcriptional regu... 89.4 2e-16
gi|326328187|gb|ADZ54162.1| EstGX1 [uncultured bacterium] 89.4 2e-16
gi|315095200|gb|EFT67176.1| transcriptional regulator, MarR fami... 86.7 1e-15
gi|282854534|ref|ZP_06263870.1| transcriptional regulator, MarR ... 86.7 1e-15
gi|50843686|ref|YP_056913.1| MarR family transcriptional regulat... 86.7 1e-15
gi|314965972|gb|EFT10071.1| transcriptional regulator, MarR fami... 86.7 1e-15
>gi|15608542|ref|NP_215920.1| transcriptional regulatory protein [Mycobacterium tuberculosis
H37Rv]
gi|31792598|ref|NP_855091.1| transcriptional regulatory protein [Mycobacterium bovis AF2122/97]
gi|121637334|ref|YP_977557.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
34 more sequence titles
Length=160
Score = 317 bits (811), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 160/160 (100%), Positives = 160/160 (100%), Gaps = 0/160 (0%)
Query 1 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI
Sbjct 1 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
Query 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR
Sbjct 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
Query 121 RTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
RTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE
Sbjct 121 RTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
>gi|15840862|ref|NP_335899.1| MarR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|148822624|ref|YP_001287378.1| transcriptional regulator [Mycobacterium tuberculosis F11]
gi|253799546|ref|YP_003032547.1| transcriptional regulator [Mycobacterium tuberculosis KZN 1435]
39 more sequence titles
Length=175
Score = 316 bits (809), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 160/160 (100%), Positives = 160/160 (100%), Gaps = 0/160 (0%)
Query 1 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI
Sbjct 16 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 75
Query 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR
Sbjct 76 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 135
Query 121 RTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
RTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE
Sbjct 136 RTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 175
>gi|289574073|ref|ZP_06454300.1| transcriptional regulator [Mycobacterium tuberculosis K85]
gi|289538504|gb|EFD43082.1| transcriptional regulator [Mycobacterium tuberculosis K85]
Length=160
Score = 313 bits (802), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/160 (99%), Positives = 159/160 (99%), Gaps = 0/160 (0%)
Query 1 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI
Sbjct 1 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
Query 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR
Sbjct 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
Query 121 RTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
RTEIARIV QMAPAERHGLVRALTAFTEAGGEPDARYEIE
Sbjct 121 RTEIARIVGQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
>gi|119390698|pdb|2NYX|A Chain A, Crystal Structure Of Rv1404 From Mycobacterium Tuberculosis
gi|119390699|pdb|2NYX|B Chain B, Crystal Structure Of Rv1404 From Mycobacterium Tuberculosis
gi|119390700|pdb|2NYX|C Chain C, Crystal Structure Of Rv1404 From Mycobacterium Tuberculosis
gi|119390701|pdb|2NYX|D Chain D, Crystal Structure Of Rv1404 From Mycobacterium Tuberculosis
Length=168
Score = 305 bits (782), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/158 (99%), Positives = 156/158 (99%), Gaps = 0/158 (0%)
Query 3 PTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINL 62
PTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINL
Sbjct 3 PTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINL 62
Query 63 ATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRT 122
ATLATLLGVQPSATGR VDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRT
Sbjct 63 ATLATLLGVQPSATGRXVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRT 122
Query 123 EIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
EIARIVEQ APAERHGLVRALTAFTEAGGEPDARYEIE
Sbjct 123 EIARIVEQXAPAERHGLVRALTAFTEAGGEPDARYEIE 160
>gi|289757510|ref|ZP_06516888.1| transcriptional regulatory protein [Mycobacterium tuberculosis
T85]
gi|289713074|gb|EFD77086.1| transcriptional regulatory protein [Mycobacterium tuberculosis
T85]
Length=147
Score = 288 bits (737), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/147 (99%), Positives = 147/147 (100%), Gaps = 0/147 (0%)
Query 14 VDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQP 73
+DVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQP
Sbjct 1 MDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQP 60
Query 74 SATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAP 133
SATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAP
Sbjct 61 SATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAP 120
Query 134 AERHGLVRALTAFTEAGGEPDARYEIE 160
AERHGLVRALTAFTEAGGEPDARYEIE
Sbjct 121 AERHGLVRALTAFTEAGGEPDARYEIE 147
>gi|183982226|ref|YP_001850517.1| transcriptional regulatory protein [Mycobacterium marinum M]
gi|183175552|gb|ACC40662.1| transcriptional regulatory protein [Mycobacterium marinum M]
Length=160
Score = 259 bits (663), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/159 (84%), Positives = 140/159 (89%), Gaps = 0/159 (0%)
Query 2 MPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPIN 61
M TE AEES+D+ITDALLTASRLLV ISAHSIAQVDENITIPQFRTLVILSN GP+N
Sbjct 1 MSTENATAAEESLDMITDALLTASRLLVGISAHSIAQVDENITIPQFRTLVILSNRGPVN 60
Query 62 LATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRR 121
LATLA LLGVQPSATGRMVDRLV A +IDR PHPTSRRELLA LTKRGRD+VR+VT HRR
Sbjct 61 LATLANLLGVQPSATGRMVDRLVSAGMIDRQPHPTSRRELLAVLTKRGRDLVRRVTAHRR 120
Query 122 TEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
EIARIVEQM PAER GLVRALTAFT AGGEPDA E++
Sbjct 121 DEIARIVEQMPPAERQGLVRALTAFTAAGGEPDANVEMD 159
>gi|118617415|ref|YP_905747.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
gi|118569525|gb|ABL04276.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
Length=276
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/160 (82%), Positives = 140/160 (88%), Gaps = 0/160 (0%)
Query 1 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
+M TE AEES+D+ITDAL TASRLLV ISAHSIAQVDENITIPQFRTLVILSN GP+
Sbjct 116 LMSTENATAAEESLDMITDALPTASRLLVGISAHSIAQVDENITIPQFRTLVILSNRGPV 175
Query 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
NLATLA LLGVQPSATGRMVDRLV A +IDR PHPTSRRELLA LTKRGRD+VR+VT HR
Sbjct 176 NLATLANLLGVQPSATGRMVDRLVSAGMIDRQPHPTSRRELLAVLTKRGRDLVRRVTAHR 235
Query 121 RTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
R EIARIVEQM PAER GLVRALTAFT AGGEPDA E++
Sbjct 236 RDEIARIVEQMPPAERQGLVRALTAFTAAGGEPDANVEMD 275
>gi|240172779|ref|ZP_04751438.1| transcriptional regulatory protein [Mycobacterium kansasii ATCC
12478]
Length=161
Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/160 (83%), Positives = 138/160 (87%), Gaps = 0/160 (0%)
Query 1 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
MM TE AEESVD ITD+LLTASRLLVAISAHSIAQ+DE ITIPQFRTLVILSN GPI
Sbjct 1 MMSTENATAAEESVDAITDSLLTASRLLVAISAHSIAQIDETITIPQFRTLVILSNRGPI 60
Query 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
NLATLATLLGVQPSATGRMVDRLV A +IDR PHP SRRELLA LTKRGRD+VR+VT R
Sbjct 61 NLATLATLLGVQPSATGRMVDRLVSAGMIDRQPHPNSRRELLAVLTKRGRDLVRRVTALR 120
Query 121 RTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
R EIARIVEQM AER GLVRALTAFT AGGEPDA E+E
Sbjct 121 RAEIARIVEQMPQAERRGLVRALTAFTAAGGEPDAHVEME 160
>gi|296170734|ref|ZP_06852307.1| MarR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894617|gb|EFG74353.1| MarR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=162
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/159 (81%), Positives = 138/159 (87%), Gaps = 0/159 (0%)
Query 2 MPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPIN 61
M + TA+ES+DVITDALLTASRLLVAISA SI QVDE ITIPQFRTLVILSN GP+N
Sbjct 1 MAADKATTADESLDVITDALLTASRLLVAISARSIGQVDETITIPQFRTLVILSNRGPVN 60
Query 62 LATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRR 121
LATLA LLGVQPSATGRMVDRLV A LIDRLPHPTSRRELLAALTKRGR+VVRQVT +RR
Sbjct 61 LATLAGLLGVQPSATGRMVDRLVAAGLIDRLPHPTSRRELLAALTKRGREVVRQVTAYRR 120
Query 122 TEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
+EIA IVE+M P ERHGLVRALTAFT AGGEPD + +
Sbjct 121 SEIAAIVEKMPPPERHGLVRALTAFTAAGGEPDVHMDAD 159
>gi|15827202|ref|NP_301465.1| marR family transcriptional regulator [Mycobacterium leprae TN]
gi|221229680|ref|YP_002503096.1| putative marR-family transcriptional regulator [Mycobacterium
leprae Br4923]
gi|13092750|emb|CAC30058.1| putative marR-family transcriptional regulator [Mycobacterium
leprae]
gi|219932787|emb|CAR70643.1| putative marR-family transcriptional regulator [Mycobacterium
leprae Br4923]
Length=161
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/158 (80%), Positives = 136/158 (87%), Gaps = 0/158 (0%)
Query 2 MPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPIN 61
M T+ A+ES+D ITDALLTASRLLVA+SAHSI QVDE IT PQFRTLVILSN GP+N
Sbjct 1 MVTDDATVADESLDDITDALLTASRLLVAVSAHSIGQVDETITFPQFRTLVILSNRGPVN 60
Query 62 LATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRR 121
LATLA LLGVQPSATGRMVDRLV A LIDRLPHPTSRRELL ALTKRGR+VVR+VT RR
Sbjct 61 LATLAGLLGVQPSATGRMVDRLVAARLIDRLPHPTSRRELLVALTKRGREVVRRVTAQRR 120
Query 122 TEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEI 159
EIARIVE+M P+ER GLVRALTAF+ AGGEPD R +I
Sbjct 121 VEIARIVEKMPPSERLGLVRALTAFSTAGGEPDVRLDI 158
>gi|41407229|ref|NP_960065.1| hypothetical protein MAP1131 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465302|ref|YP_882556.1| MarR family transcriptional regulator [Mycobacterium avium 104]
gi|254775821|ref|ZP_05217337.1| transcriptional regulator, MarR family protein [Mycobacterium
avium subsp. avium ATCC 25291]
gi|41395580|gb|AAS03448.1| hypothetical protein MAP_1131 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166589|gb|ABK67486.1| transcriptional regulator, MarR family protein [Mycobacterium
avium 104]
gi|336461624|gb|EGO40489.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis
S397]
Length=161
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/152 (82%), Positives = 131/152 (87%), Gaps = 0/152 (0%)
Query 9 TAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATL 68
T +ES+D ITDALLTASRLL+AISA S+ QVDE ITIPQFRTLVILSN GP+NLATLA L
Sbjct 7 TVDESLDAITDALLTASRLLMAISARSVGQVDETITIPQFRTLVILSNRGPVNLATLAGL 66
Query 69 LGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIV 128
LGVQPSATGRMVDRLV A LIDRLPHPTSRRELLAALT RGRDVV QVT HRR EIA IV
Sbjct 67 LGVQPSATGRMVDRLVAAGLIDRLPHPTSRRELLAALTTRGRDVVHQVTAHRRAEIAAIV 126
Query 129 EQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
+M PAERHGLVRALTAFT AGGEPD + E
Sbjct 127 AKMPPAERHGLVRALTAFTAAGGEPDVHLDAE 158
>gi|342858681|ref|ZP_08715336.1| MarR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342134385|gb|EGT87565.1| MarR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=161
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/152 (82%), Positives = 132/152 (87%), Gaps = 0/152 (0%)
Query 9 TAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATL 68
T +ES+DVITDALLTASRLL+AISA S+ QVDE ITI QFRTLVILSN GP+NLATLA L
Sbjct 7 TVDESLDVITDALLTASRLLMAISARSVGQVDETITIAQFRTLVILSNRGPVNLATLAGL 66
Query 69 LGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIV 128
LGVQPSATGRMVDRLV A LIDRLPHPTSRRELLAALT RGRDVV QVT HRRTEIA IV
Sbjct 67 LGVQPSATGRMVDRLVAAGLIDRLPHPTSRRELLAALTARGRDVVHQVTAHRRTEIAAIV 126
Query 129 EQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
+M PAERHGLVRALTAFT AGGEPD + +
Sbjct 127 AKMPPAERHGLVRALTAFTAAGGEPDVHLDAD 158
>gi|254821960|ref|ZP_05226961.1| transcriptional regulator, MarR family protein [Mycobacterium
intracellulare ATCC 13950]
Length=161
Score = 239 bits (611), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 124/153 (82%), Positives = 132/153 (87%), Gaps = 0/153 (0%)
Query 8 ATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLAT 67
AT +ES+DVITDALLTASRLL+AISA S+ QVDE ITI QFRTLVILSN GP+NLATLA
Sbjct 6 ATVDESLDVITDALLTASRLLMAISARSVGQVDETITIAQFRTLVILSNRGPVNLATLAG 65
Query 68 LLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARI 127
LLGVQPSATGRMVDRLV A LIDRLPHPTSRRELLAALT RGRDVV QVT HRRTEIA I
Sbjct 66 LLGVQPSATGRMVDRLVAAGLIDRLPHPTSRRELLAALTTRGRDVVHQVTAHRRTEIAAI 125
Query 128 VEQMAPAERHGLVRALTAFTEAGGEPDARYEIE 160
V +M P ERHGLVRALTAFT AGGEPD + +
Sbjct 126 VAKMPPPERHGLVRALTAFTAAGGEPDVHLDAD 158
>gi|169628116|ref|YP_001701765.1| MarR family transcriptional regulator [Mycobacterium abscessus
ATCC 19977]
gi|169240083|emb|CAM61111.1| Putative MarR-family transcriptional regulator [Mycobacterium
abscessus]
Length=157
Score = 189 bits (481), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/142 (72%), Positives = 109/142 (77%), Gaps = 0/142 (0%)
Query 11 EESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLG 70
+ES+D + D+LL ASRLL+AISA SIAQVDE IT PQFRTLVIL N GPINLATLA LG
Sbjct 9 DESLDALADSLLVASRLLLAISARSIAQVDETITFPQFRTLVILFNEGPINLATLAQSLG 68
Query 71 VQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQ 130
VQPS TGRMVDRLV A LIDR PHP SRREL+A LT G VVR+V RR EIA I +
Sbjct 69 VQPSTTGRMVDRLVSAGLIDRRPHPRSRRELVAELTAHGEGVVREVMAQRRAEIAEIAAR 128
Query 131 MAPAERHGLVRALTAFTEAGGE 152
M ER GLVRAL AFT AGGE
Sbjct 129 MPARERRGLVRALDAFTAAGGE 150
>gi|326385234|ref|ZP_08206899.1| transcriptional regulator [Gordonia neofelifaecis NRRL B-59395]
gi|326196053|gb|EGD53262.1| transcriptional regulator [Gordonia neofelifaecis NRRL B-59395]
Length=164
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/139 (59%), Positives = 105/139 (76%), Gaps = 0/139 (0%)
Query 15 DVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPS 74
D + DA+LTASRLLV++SA SIAQVD++ITI QFR LV+LSN GP+NLA+LA L VQPS
Sbjct 16 DDVADAVLTASRLLVSLSAKSIAQVDDSITIAQFRVLVLLSNSGPMNLASLAHKLSVQPS 75
Query 75 ATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPA 134
RM+DRL AEL++R P +RREL+ LT+RG VR VT+ RR EI +++ ++
Sbjct 76 TASRMIDRLAHAELVERAPSAQTRRELIVVLTERGAATVRDVTDRRRDEIEQVISHLSRR 135
Query 135 ERHGLVRALTAFTEAGGEP 153
+R LVRALTAF+EAG EP
Sbjct 136 QRQDLVRALTAFSEAGDEP 154
>gi|300787593|ref|YP_003767884.1| MarR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299797107|gb|ADJ47482.1| MarR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|340529128|gb|AEK44333.1| MarR family transcriptional regulator [Amycolatopsis mediterranei
S699]
Length=164
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/154 (57%), Positives = 100/154 (65%), Gaps = 0/154 (0%)
Query 2 MPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPIN 61
MP A VD +TDA+LTASRLLVA+SA SIA + IT+PQFR LV+L GP+
Sbjct 1 MPRSTSALDTTDVDAVTDAVLTASRLLVAVSARSIAAAGDMITLPQFRLLVVLQTRGPLK 60
Query 62 LATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRR 121
A LA L V PS RMVDRLV ++DR SRRE++ ALTK G VVRQVT RR
Sbjct 61 HADLAEYLQVTPSTASRMVDRLVAVGVVDRQHSAVSRREIVLALTKEGAKVVRQVTARRR 120
Query 122 TEIARIVEQMAPAERHGLVRALTAFTEAGGEPDA 155
EIA+IV +M R GLV LTAF EAGGEP A
Sbjct 121 KEIAKIVARMPDDARSGLVDVLTAFAEAGGEPPA 154
>gi|256395564|ref|YP_003117128.1| MarR family transcriptional regulator [Catenulispora acidiphila
DSM 44928]
gi|256361790|gb|ACU75287.1| transcriptional regulator, MarR family [Catenulispora acidiphila
DSM 44928]
Length=178
Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/146 (56%), Positives = 104/146 (72%), Gaps = 0/146 (0%)
Query 13 SVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQ 72
+VD +TDALLTASRLLVA+SA S+ +V++++T+PQFR LV+LS+ GP+ L LA L V
Sbjct 26 TVDRVTDALLTASRLLVAVSARSLNEVEDSLTLPQFRALVVLSSRGPLRLTHLAEHLAVN 85
Query 73 PSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMA 132
PS RM +RL A +IDR P+P +RRE +A LT GR+VV QVT RR EI IVE+M
Sbjct 86 PSTAMRMAERLAAAGMIDRSPNPENRRESIATLTAAGREVVEQVTSRRREEITTIVERMP 145
Query 133 PAERHGLVRALTAFTEAGGEPDARYE 158
P LV AL +F+ AGGEP A Y+
Sbjct 146 PDHLDRLVEALESFSAAGGEPSAGYD 171
>gi|294633512|ref|ZP_06712071.1| MarR family transcriptional regulator [Streptomyces sp. e14]
gi|292831293|gb|EFF89643.1| MarR family transcriptional regulator [Streptomyces sp. e14]
Length=168
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/144 (56%), Positives = 99/144 (69%), Gaps = 0/144 (0%)
Query 12 ESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGV 71
E VD +T A+LTASRLLVA+SA S+A+V++ +T+PQFR LV+LS G L LA LL V
Sbjct 5 EDVDAVTRAVLTASRLLVAVSARSLAEVEDRVTLPQFRMLVVLSTRGATKLVALADLLQV 64
Query 72 QPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQM 131
PS RMVDRL+ A L DR P+P +RRE L LT+ GR V VT RR EIA IVE++
Sbjct 65 APSTAMRMVDRLIAAGLADRQPNPGNRRETLLRLTEEGRRTVEAVTGRRRAEIAAIVERL 124
Query 132 APAERHGLVRALTAFTEAGGEPDA 155
+ +R L+ AL AF AGGEP A
Sbjct 125 SSTQRLALIEALAAFNRAGGEPPA 148
>gi|326781170|ref|ZP_08240435.1| transcriptional regulator, MarR family [Streptomyces cf. griseus
XylebKG-1]
gi|326661503|gb|EGE46349.1| transcriptional regulator, MarR family [Streptomyces griseus
XylebKG-1]
Length=176
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/149 (56%), Positives = 99/149 (67%), Gaps = 0/149 (0%)
Query 7 PATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLA 66
PA + VD +T A+LTASRLLVA+SA S+A V+E +T+PQFR LV+LS+ G L LA
Sbjct 7 PAERMDDVDAVTGAVLTASRLLVAVSARSLADVEEQVTLPQFRMLVVLSSRGDTKLVALA 66
Query 67 TLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIAR 126
LGV PS RMVDRL+ A L DR +P +RRE L LT+ GR V VT RR EIA
Sbjct 67 ESLGVAPSTAMRMVDRLIAAGLADRQTNPDNRRETLLRLTEEGRRTVGNVTARRRREIAA 126
Query 127 IVEQMAPAERHGLVRALTAFTEAGGEPDA 155
IVE++ P R L+ ALT F AGGEP A
Sbjct 127 IVERLDPLRRTALIEALTDFNRAGGEPPA 155
>gi|182440500|ref|YP_001828219.1| MarR family transcriptional regulator [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178469016|dbj|BAG23536.1| putative MarR-family transcriptional regulator [Streptomyces
griseus subsp. griseus NBRC 13350]
Length=176
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/149 (56%), Positives = 99/149 (67%), Gaps = 0/149 (0%)
Query 7 PATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLA 66
PA + VD +T A+LTASRLLVA+SA S+A V+E +T+PQFR LV+LS+ G L LA
Sbjct 7 PAEHMDDVDAVTGAVLTASRLLVAVSARSLADVEERVTLPQFRMLVVLSSRGDTKLVALA 66
Query 67 TLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIAR 126
LGV PS RMVDRL+ A L DR +P +RRE L LT+ GR V VT RR EIA
Sbjct 67 ESLGVAPSTAMRMVDRLIAAGLADRQTNPDNRRETLLRLTEEGRRTVGNVTARRRQEIAA 126
Query 127 IVEQMAPAERHGLVRALTAFTEAGGEPDA 155
IVE++ P R L+ ALT F AGGEP A
Sbjct 127 IVERLDPLRRTALIEALTDFNRAGGEPPA 155
>gi|291452361|ref|ZP_06591751.1| transcriptional regulator [Streptomyces albus J1074]
gi|291355310|gb|EFE82212.1| transcriptional regulator [Streptomyces albus J1074]
Length=176
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/149 (56%), Positives = 100/149 (68%), Gaps = 0/149 (0%)
Query 5 EYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLAT 64
E P + VD +T A+LTASRLLVAISA S+A V + +T+PQFR LV+LS GP L T
Sbjct 3 EPPDGIDVDVDAVTGAVLTASRLLVAISARSLAAVGDRVTLPQFRMLVVLSVRGPTRLVT 62
Query 65 LATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEI 124
LA LGV PS RMVDRL+ A L +R +P +RRE LT G VR+VT+ RR EI
Sbjct 63 LAEALGVAPSTAMRMVDRLIAAGLAERQANPGNRRETSLYLTDAGLRTVREVTDRRRAEI 122
Query 125 ARIVEQMAPAERHGLVRALTAFTEAGGEP 153
A +V ++ PA+R LV AL AF EAGGEP
Sbjct 123 AGVVARLEPAQRADLVAALHAFNEAGGEP 151
>gi|289767379|ref|ZP_06526757.1| transcriptional regulator [Streptomyces lividans TK24]
gi|289697578|gb|EFD65007.1| transcriptional regulator [Streptomyces lividans TK24]
Length=168
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/144 (55%), Positives = 96/144 (67%), Gaps = 0/144 (0%)
Query 12 ESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGV 71
+ VD +T +LTASRLLVA+SA S++ V++ +T+PQFR LV+LS G L LA LL V
Sbjct 12 DDVDAVTRQVLTASRLLVAVSARSLSAVEDRVTLPQFRMLVVLSTRGATKLVALADLLHV 71
Query 72 QPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQM 131
PS RMVDRL+ A L DR +P +RRE L LT GR V VT RRTEIA IVE++
Sbjct 72 APSTAMRMVDRLIAAGLADRQVNPDNRRETLLRLTAEGRRTVEDVTARRRTEIAAIVERL 131
Query 132 APAERHGLVRALTAFTEAGGEPDA 155
P +R L+ AL AF EAG EP A
Sbjct 132 LPEKRRVLIDALAAFNEAGAEPPA 155
>gi|21225479|ref|NP_631258.1| transcriptional regulator [Streptomyces coelicolor A3(2)]
gi|8546910|emb|CAB94662.1| putative transcriptional regulator [Streptomyces coelicolor A3(2)]
Length=158
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/144 (55%), Positives = 96/144 (67%), Gaps = 0/144 (0%)
Query 12 ESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGV 71
+ VD +T +LTASRLLVA+SA S++ V++ +T+PQFR LV+LS G L LA LL V
Sbjct 2 DDVDAVTRQVLTASRLLVAVSARSLSAVEDRVTLPQFRMLVVLSTRGATKLVALADLLHV 61
Query 72 QPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQM 131
PS RMVDRL+ A L DR +P +RRE L LT GR V VT RRTEIA IVE++
Sbjct 62 APSTAMRMVDRLIAAGLADRQVNPDNRRETLLRLTAEGRRTVEDVTARRRTEIAAIVERL 121
Query 132 APAERHGLVRALTAFTEAGGEPDA 155
P +R L+ AL AF EAG EP A
Sbjct 122 LPEKRRVLIDALAAFNEAGAEPPA 145
>gi|329937298|ref|ZP_08286897.1| MarR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
gi|329303579|gb|EGG47465.1| MarR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
Length=172
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/152 (54%), Positives = 101/152 (67%), Gaps = 1/152 (0%)
Query 2 MPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPIN 61
MP A E VD + A+LTASRLL+A+SA S+A+V+E +T+PQFR LV+LS G
Sbjct 1 MPAHGTGPAGE-VDEVARAVLTASRLLLAVSARSLAEVEERLTLPQFRMLVVLSTRGATK 59
Query 62 LATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRR 121
L LA LL V PS RMVDRL+ A L DR +P +RRE LT+ GR VV +V RR
Sbjct 60 LVVLAELLQVAPSTAMRMVDRLIAAGLADRRINPDNRRETRLTLTEEGRRVVGRVMARRR 119
Query 122 TEIARIVEQMAPAERHGLVRALTAFTEAGGEP 153
E+ IV ++AP +R LV ALTAFTEAGGEP
Sbjct 120 EEVTGIVRRLAPEQRASLVEALTAFTEAGGEP 151
>gi|302524980|ref|ZP_07277322.1| MarR family transcriptional regulator [Streptomyces sp. AA4]
gi|302433875|gb|EFL05691.1| MarR family transcriptional regulator [Streptomyces sp. AA4]
Length=172
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/144 (58%), Positives = 105/144 (73%), Gaps = 0/144 (0%)
Query 12 ESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGV 71
+ VD +T+A+LTASRLLVA+SA SIA V + IT+PQFR LV+L + GP+ A LA LGV
Sbjct 20 DDVDAVTEAVLTASRLLVAVSARSIASVGDLITMPQFRLLVVLHSRGPLKQAALAEHLGV 79
Query 72 QPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQM 131
PS RM+DRLV L+ RL +P+SRRE++ LT+ G +VR VT+ RR EIA +VE+M
Sbjct 80 TPSTASRMIDRLVAVALVARLGNPSSRREVVIELTREGDRIVRVVTQRRRREIAAVVEKM 139
Query 132 APAERHGLVRALTAFTEAGGEPDA 155
+ R GLV ALTAF EAGGEP A
Sbjct 140 PESARRGLVDALTAFAEAGGEPPA 163
>gi|290962218|ref|YP_003493400.1| MarR family transcriptional regulator [Streptomyces scabiei 87.22]
gi|260651744|emb|CBG74870.1| putative MarR-family transcriptional regulator [Streptomyces
scabiei 87.22]
Length=177
Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/147 (55%), Positives = 96/147 (66%), Gaps = 0/147 (0%)
Query 1 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
M E PA + VD +T A+LTASRLLVAISA S+A V+E +T+PQFR LV+LS G
Sbjct 1 MTEREGPAGDVDDVDEVTRAVLTASRLLVAISARSLAAVEERVTLPQFRMLVVLSMRGAT 60
Query 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
L LA L V PS RMVDRL+ A L DR +P +RRE L LT GR V V R
Sbjct 61 KLVVLADQLQVAPSTAMRMVDRLIAAGLADRRTNPDNRRETLLQLTDEGRRAVEDVMARR 120
Query 121 RTEIARIVEQMAPAERHGLVRALTAFT 147
RTE+A +VE++APA+R LV ALTAF
Sbjct 121 RTELATVVERLAPAQREALVAALTAFN 147
>gi|86741196|ref|YP_481596.1| MarR family transcriptional regulator [Frankia sp. CcI3]
gi|86568058|gb|ABD11867.1| transcriptional regulator, MarR family [Frankia sp. CcI3]
Length=178
Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/142 (57%), Positives = 98/142 (70%), Gaps = 0/142 (0%)
Query 14 VDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQP 73
VD +TDA+LTASRLLVA+SA SIA V E++T+PQFR LV+L+ GP LA L V P
Sbjct 25 VDEVTDAVLTASRLLVAVSARSIAAVGEDVTLPQFRMLVVLAGRGPQRAGELAESLDVHP 84
Query 74 SATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAP 133
S RM DRLV A LI R+ +P +RRE++ LT GR +V +VT RR EIA IV ++AP
Sbjct 85 STATRMADRLVVAGLILRVGNPRNRREVIVELTGPGRRLVDEVTARRRAEIATIVARLAP 144
Query 134 AERHGLVRALTAFTEAGGEPDA 155
R LV AL AF +AGGEP A
Sbjct 145 DVRGSLVGALRAFADAGGEPAA 166
>gi|345000747|ref|YP_004803601.1| MarR family transcriptional regulator [Streptomyces sp. SirexAA-E]
gi|344316373|gb|AEN11061.1| transcriptional regulator, MarR family [Streptomyces sp. SirexAA-E]
Length=191
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/141 (54%), Positives = 98/141 (70%), Gaps = 0/141 (0%)
Query 12 ESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGV 71
+ VD +T A+LTASRLLVA++A S+A V++ +T+PQFR LV+L+ HG L LA LGV
Sbjct 42 DDVDAVTHAVLTASRLLVAVTARSLAAVEDRVTLPQFRLLVVLATHGDAKLVELADRLGV 101
Query 72 QPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQM 131
PS RMVDRL+ A L +R +P +RRE + +T G +V VT RR EI IVE++
Sbjct 102 NPSTAMRMVDRLIAAGLAERRVNPGNRRETVLRVTPEGDRLVSDVTAARRREITSIVERL 161
Query 132 APAERHGLVRALTAFTEAGGE 152
AP +R LV ALTAFT+AGGE
Sbjct 162 APRQRTALVEALTAFTQAGGE 182
>gi|302544210|ref|ZP_07296552.1| MarR family transcriptional regulator [Streptomyces hygroscopicus
ATCC 53653]
gi|302461828|gb|EFL24921.1| MarR family transcriptional regulator [Streptomyces himastatinicus
ATCC 53653]
Length=179
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/144 (51%), Positives = 99/144 (69%), Gaps = 0/144 (0%)
Query 10 AEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLL 69
+E + + A+LTASRLLVA+SA S+A V+E++T+PQFR LV+L GP++L+ LA L
Sbjct 23 SESDAEAMVTAVLTASRLLVAVSARSLAAVEESLTLPQFRMLVVLDAGGPLSLSGLAGEL 82
Query 70 GVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVE 129
GVQPS RM+DRLV +++R RR + +LT+ GR +V +VTE RR EIA IV+
Sbjct 83 GVQPSTAMRMIDRLVTTGVVERGVSAEDRRTSMISLTRAGRRIVAEVTERRRREIAGIVD 142
Query 130 QMAPAERHGLVRALTAFTEAGGEP 153
M +R L+ AL AF EAGGEP
Sbjct 143 VMPAGQRRHLIEALQAFAEAGGEP 166
>gi|297194322|ref|ZP_06911720.1| transcriptional regulator [Streptomyces pristinaespiralis ATCC
25486]
gi|297152222|gb|EFH31605.1| transcriptional regulator [Streptomyces pristinaespiralis ATCC
25486]
Length=158
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/127 (56%), Positives = 88/127 (70%), Gaps = 0/127 (0%)
Query 27 LLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVDRLVGA 86
LLVA+SA S+A V++ +T+PQFR LV+LS GP L LA LGV PS RMVDRL+ A
Sbjct 9 LLVALSARSLAAVEDRVTLPQFRLLVVLSLEGPAKLVVLADRLGVNPSTAMRMVDRLIAA 68
Query 87 ELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVRALTAF 146
L DR +P +RRE + LT GR +V VT RR EIA IVE++ P++R L+ AL AF
Sbjct 69 GLADRQVNPDNRRETVLRLTTEGRRIVEDVTSQRRKEIATIVERLDPSQRAALIGALAAF 128
Query 147 TEAGGEP 153
TEAGGEP
Sbjct 129 TEAGGEP 135
>gi|329935488|ref|ZP_08285348.1| MarR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
gi|329305012|gb|EGG48879.1| MarR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
Length=197
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/142 (54%), Positives = 94/142 (67%), Gaps = 0/142 (0%)
Query 12 ESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGV 71
+ V+ +T A+L ASRLL+A+SA S+A V++ +T+PQFR L++LS G L LA LL V
Sbjct 32 DDVERVTRAVLAASRLLMAVSARSLAAVEDGVTLPQFRMLIVLSTRGATKLVALAELLQV 91
Query 72 QPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQM 131
PS RMVDRL+ A L R +P SRRE L LT+ GR V V RRT IA IVE++
Sbjct 92 APSTAMRMVDRLITAGLAVREVNPESRRETLLTLTEEGRRTVAGVVARRRTAIASIVERL 151
Query 132 APAERHGLVRALTAFTEAGGEP 153
PA R LV AL AF EAGGEP
Sbjct 152 DPAHRAALVEALAAFNEAGGEP 173
>gi|256395866|ref|YP_003117430.1| MarR family transcriptional regulator [Catenulispora acidiphila
DSM 44928]
gi|256362092|gb|ACU75589.1| transcriptional regulator, MarR family [Catenulispora acidiphila
DSM 44928]
Length=166
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/149 (47%), Positives = 100/149 (68%), Gaps = 0/149 (0%)
Query 1 MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
M P +PAT E + A+L ASR++V +SA ++A VD+++T+PQ RTLV+L++ P+
Sbjct 1 MQPDIHPATPEADTQEVVAAVLAASRMIVGMSARALADVDDSLTLPQLRTLVVLADRPPM 60
Query 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
+ LA LGV PS RM DRL A+L++R P+P SRRE L +LT+ G D+V +V + R
Sbjct 61 KQSDLAAELGVNPSTVLRMADRLAAADLLERQPNPASRREQLLSLTETGCDLVHRVMDRR 120
Query 121 RTEIARIVEQMAPAERHGLVRALTAFTEA 149
E+ +V ++ PAER GLV +L A TEA
Sbjct 121 SEEVTALVGRLTPAERAGLVHSLRALTEA 149
>gi|331698731|ref|YP_004334970.1| MarR family transcriptional regulator [Pseudonocardia dioxanivorans
CB1190]
gi|326953420|gb|AEA27117.1| transcriptional regulator, MarR family [Pseudonocardia dioxanivorans
CB1190]
Length=180
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/155 (48%), Positives = 98/155 (64%), Gaps = 7/155 (4%)
Query 7 PATAEES----VDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINL 62
P T EES D + DA++ A+R+LV ++A S+A V++ IT+PQ R LV++S+ GP+NL
Sbjct 19 PVTIEESDGPTADQV-DAVMLAARVLVGVTASSVAAVEDRITLPQLRVLVMISSRGPLNL 77
Query 63 ATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRT 122
A +A LGV PS R +RLV A L+DR +P RR L+ LT GR +V QV RR
Sbjct 78 AAVAAGLGVHPSNISRACERLVAAGLLDRTDNPADRRNLVLELTAEGRTLVAQVDRQRRD 137
Query 123 EIARIVEQMAPAERHGLVRALTAFTEAGGE--PDA 155
IARI++ M R LV AL AF +A GE PDA
Sbjct 138 AIARILDGMPRQRRASLVPALRAFADAAGETAPDA 172
>gi|297161373|gb|ADI11085.1| MarR family transcriptional regulator [Streptomyces bingchenggensis
BCW-1]
Length=183
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/138 (50%), Positives = 91/138 (66%), Gaps = 2/138 (1%)
Query 20 ALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRM 79
++L +RLLVAISA ++A +DE +T Q R LV+L + GP LA LA+ LGV PS R
Sbjct 17 SMLATTRLLVAISARALASIDETLTATQLRALVVLDSCGPAKLAALASGLGVNPSTALRT 76
Query 80 VDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAE-RHG 138
VDRL L+DR +P SRRE++ +T RG +VV +V E+RR EI+ +V+++ PAE R G
Sbjct 77 VDRLESLGLVDRRVNPDSRREVVLRVTDRGAEVVARVVEYRRAEISVLVDRL-PAEVRAG 135
Query 139 LVRALTAFTEAGGEPDAR 156
L R L A T EPD R
Sbjct 136 LARGLRALTAVADEPDLR 153
>gi|111025090|ref|YP_707510.1| MarR family transcriptional regulator [Rhodococcus jostii RHA1]
gi|110824069|gb|ABG99352.1| transcriptional regulator, MarR family protein [Rhodococcus jostii
RHA1]
Length=168
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/135 (45%), Positives = 86/135 (64%), Gaps = 0/135 (0%)
Query 19 DALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGR 78
+A+L ASR LV I+A S+A+V++ +T+P R LV++ GP+NL +A LGV PS R
Sbjct 20 EAVLWASRALVGIAAASVAEVEDLVTVPHLRILVMVDTRGPLNLGAVAEALGVNPSNASR 79
Query 79 MVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHG 138
VDRL+ + L+DR P RR L LT G+++V +V+ HRR I+ ++E+M P +R
Sbjct 80 AVDRLIKSGLLDRRDAPEDRRNLNLTLTAAGQELVDRVSTHRREAISGVLERMTPEDRDA 139
Query 139 LVRALTAFTEAGGEP 153
L AL F A GEP
Sbjct 140 LASALRRFAAAAGEP 154
>gi|337762826|emb|CCB71534.1| putative MarR-family transcriptional regulator [Streptomyces
cattleya NRRL 8057]
Length=175
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/152 (45%), Positives = 94/152 (62%), Gaps = 6/152 (3%)
Query 12 ESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGV 71
++ + ++DA+L ASRL +AISA ++A +D +T+PQ RTLV+L GP+ LA LA L V
Sbjct 23 DAAEDVSDAVLAASRLFMAISARALAAIDPALTLPQLRTLVVLHGEGPVKLAALAAALDV 82
Query 72 QPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQM 131
PS RMVD+L L+DR +P +RRE++ LT+ GR +V QV HR EIA IV ++
Sbjct 83 NPSTAMRMVDKLEAHGLVDRQVNPGNRREVILRLTRDGRHLVDQVMAHRHREIAEIVGRL 142
Query 132 APAERHGLVRALTAFTEAGGEP------DARY 157
R LVR+L A EP DAR+
Sbjct 143 PARRRTDLVRSLRELIAAADEPALGMPEDARH 174
>gi|258653831|ref|YP_003202987.1| MarR family transcriptional regulator [Nakamurella multipartita
DSM 44233]
gi|258557056|gb|ACV79998.1| transcriptional regulator, MarR family [Nakamurella multipartita
DSM 44233]
Length=189
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/136 (42%), Positives = 84/136 (62%), Gaps = 0/136 (0%)
Query 19 DALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGR 78
+A+L ASR+L+ ++ S+A V++ +T+ QFR LVI+++ GP++LA LA + V PS R
Sbjct 25 EAVLAASRVLIGVAVRSLAPVEDTVTLTQFRALVIIASRGPMHLAALAEAMQVHPSNATR 84
Query 79 MVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHG 138
DRLV + L DR +P RR LL LT +GR +V V + RR I +I+ +M +R
Sbjct 85 ACDRLVASGLADRRDNPADRRHLLLTLTDQGRALVDSVMDRRRAAIRQILHRMPLGDRTQ 144
Query 139 LVRALTAFTEAGGEPD 154
+ T F AGGE +
Sbjct 145 VAAGFTRFAAAGGESE 160
>gi|324999817|ref|ZP_08120929.1| MarR family transcriptional regulator [Pseudonocardia sp. P1]
Length=171
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/153 (39%), Positives = 88/153 (58%), Gaps = 5/153 (3%)
Query 12 ESVDVITDALLTASRLLVAISAHSIA----QVDENITIPQFRTLVILSNHGPINLATLAT 67
+ +D + DA++TASR ++++ A S+A E++T+PQ+R LV+L+ HG A LA
Sbjct 3 DEIDDVVDAVMTASRAMLSVVARSLAAAGEHAGEDVTVPQYRALVVLAQHGTRRPADLAV 62
Query 68 LLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARI 127
L V S RM DRLV L +R RRE+ AL+ GRD+VR+VT RR E+ R+
Sbjct 63 ALAVSASTATRMCDRLVARGLAERTRTGADRREVAVALSGAGRDLVREVTRRRRAEMHRL 122
Query 128 VEQMAPAERHGLVRALTAFTEAGGE-PDARYEI 159
+ + ER + AL F A GE P+ + +
Sbjct 123 LATLPAGERTAVRDALRTFAAAAGEVPETDWAV 155
>gi|108799610|ref|YP_639807.1| MarR family transcriptional regulator [Mycobacterium sp. MCS]
gi|119868721|ref|YP_938673.1| MarR family transcriptional regulator [Mycobacterium sp. KMS]
gi|126435252|ref|YP_001070943.1| MarR family transcriptional regulator [Mycobacterium sp. JLS]
gi|108770029|gb|ABG08751.1| transcriptional regulator, MarR family [Mycobacterium sp. MCS]
gi|119694810|gb|ABL91883.1| transcriptional regulator, MarR family [Mycobacterium sp. KMS]
gi|126235052|gb|ABN98452.1| transcriptional regulator, MarR family [Mycobacterium sp. JLS]
Length=169
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/135 (45%), Positives = 82/135 (61%), Gaps = 0/135 (0%)
Query 18 TDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATG 77
TDA+L ASR LV I+A S+A V++ +T+PQ+R LV++ GP+NLA++A L V PS
Sbjct 19 TDAVLRASRALVGIAATSLAAVEDVVTVPQWRVLVLIYTRGPMNLASVAAELDVNPSNAS 78
Query 78 RMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERH 137
R DRL A L+DR RR + LT GR +V++VT RR I +++ +M R
Sbjct 79 RTCDRLTKAGLLDRREAEVDRRNITLTLTAAGRRLVQKVTRQRRAAIEKVLRRMPAPARE 138
Query 138 GLVRALTAFTEAGGE 152
GL AL F A GE
Sbjct 139 GLADALAEFAAAAGE 153
>gi|258650646|ref|YP_003199802.1| MarR family transcriptional regulator [Nakamurella multipartita
DSM 44233]
gi|258553871|gb|ACV76813.1| transcriptional regulator, MarR family [Nakamurella multipartita
DSM 44233]
Length=168
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/153 (39%), Positives = 85/153 (56%), Gaps = 1/153 (0%)
Query 2 MPTEYPATAEE-SVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPI 60
MP E A + + + D +LTAS+ LV ++A S+ + N+T PQ R LVI+++ GP+
Sbjct 1 MPRESKAALQRRQLALQVDGVLTASKALVGVAAQSVEEAGANLTAPQLRALVIVASLGPL 60
Query 61 NLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHR 120
+L LA + V PS R DRLV L+DR +P RR L LT G+ ++ V E R
Sbjct 61 HLTALAAAMRVHPSNATRTCDRLVADGLLDRKDNPADRRHLALTLTPAGQHLLDGVMERR 120
Query 121 RTEIARIVEQMAPAERHGLVRALTAFTEAGGEP 153
R I+ I+++M R + AL F A GEP
Sbjct 121 RAAISEILQRMPVLARERVADALAEFASAAGEP 153
>gi|331696095|ref|YP_004332334.1| MarR family transcriptional regulator [Pseudonocardia dioxanivorans
CB1190]
gi|326950784|gb|AEA24481.1| transcriptional regulator, MarR family [Pseudonocardia dioxanivorans
CB1190]
Length=135
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/114 (47%), Positives = 71/114 (63%), Gaps = 0/114 (0%)
Query 40 DENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRR 99
D+++T+PQ+R LV+L+ G + A LA LL V S RM +RLVG L++R T RR
Sbjct 13 DDDVTLPQYRALVVLAQRGGLRPADLADLLAVNRSTASRMCERLVGKGLVERDRSDTDRR 72
Query 100 ELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVRALTAFTEAGGEP 153
E+ LT+RGR +V VT RR E+ +V M+ R GLV AL AF +A GEP
Sbjct 73 EVALTLTERGRVLVDDVTRRRRAELRTLVTAMSADTRDGLVTALRAFADAAGEP 126
>gi|152968194|ref|YP_001363978.1| MarR family transcriptional regulator [Kineococcus radiotolerans
SRS30216]
gi|151362711|gb|ABS05714.1| transcriptional regulator, MarR family [Kineococcus radiotolerans
SRS30216]
Length=159
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (37%), Positives = 83/144 (58%), Gaps = 0/144 (0%)
Query 11 EESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLG 70
++ VD +A+L SR +V +S S+A E++T+ Q+R LV++ + GP+ LA +G
Sbjct 5 DQLVDEDVEAVLAGSRAVVGLSVRSLADAMESLTLQQYRVLVLICSRGPLRSGALAAAIG 64
Query 71 VQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQ 130
V PS R VDRL A + R +P +RRE+L A T++ R +V QV RRTE ++ +
Sbjct 65 VHPSTFTRAVDRLAAAGWVTRQDNPDTRREVLVAPTEKARVLVEQVLARRRTEFEAVLGR 124
Query 131 MAPAERHGLVRALTAFTEAGGEPD 154
M+ +R + + F A G+ D
Sbjct 125 MSLDDRASVREGFSRFAAAAGDVD 148
>gi|258653838|ref|YP_003202994.1| MarR family transcriptional regulator [Nakamurella multipartita
DSM 44233]
gi|258557063|gb|ACV80005.1| transcriptional regulator, MarR family [Nakamurella multipartita
DSM 44233]
Length=162
Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 0/145 (0%)
Query 9 TAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATL 68
+ + + D DA+L SR LV ++A S+A +++ +++ Q R L+IL+ GP++L LA
Sbjct 6 STDPTFDADVDAVLAGSRTLVGVAARSLADLEDVVSVTQLRALMILATRGPMHLTALAED 65
Query 69 LGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIV 128
+GV PS R DRLV + L+DR +P RR LL LT GR+++ ++ RR I +I+
Sbjct 66 MGVHPSNATRACDRLVASGLLDRRDNPDDRRHLLLDLTPEGRELIDRIIGRRRAAIEQIL 125
Query 129 EQMAPAERHGLVRALTAFTEAGGEP 153
+M R L RAL F AGGEP
Sbjct 126 LRMPTTHRRALGRALAHFAAAGGEP 150
>gi|145594942|ref|YP_001159239.1| regulatory protein MarR [Salinispora tropica CNB-440]
gi|145304279|gb|ABP54861.1| transcriptional regulator, MarR family [Salinispora tropica CNB-440]
Length=176
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/142 (40%), Positives = 76/142 (54%), Gaps = 0/142 (0%)
Query 15 DVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPS 74
D + DAL R LV ++ H++ D ++T+ Q+R L +L + GP+ + LAT L V PS
Sbjct 21 DPLVDALAALCRSLVDVTVHTLDARDVDLTVSQYRILALLVSQGPVRVVDLATTLHVHPS 80
Query 75 ATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPA 134
R DRLV EL+ R + RR +LT GR++V +V R EI R+V A
Sbjct 81 TVTRACDRLVRRELVARRTGESDRRVSWLSLTVAGRELVSEVDRRRSAEIRRLVAVTGLA 140
Query 135 ERHGLVRALTAFTEAGGEPDAR 156
LV AL A A GEPD R
Sbjct 141 PDAELVGALEALVTAAGEPDER 162
>gi|324998233|ref|ZP_08119345.1| MarR family transcriptional regulator [Pseudonocardia sp. P1]
Length=172
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/124 (45%), Positives = 73/124 (59%), Gaps = 3/124 (2%)
Query 13 SVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQ 72
S DV +A L +RL IS ++A D IT+PQ R L+++ GP N+AT+ LGV
Sbjct 6 SADV--EAGLAVARLFTGISVRAVAATDNAITLPQLRVLMMIDESGPTNVATVGRGLGVH 63
Query 73 PSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMA 132
S R+V+RLV A LI R H RR L+ LT GR VV + EHRR EIA ++ ++
Sbjct 64 SSNATRVVERLVRAGLIARRTHDDDRRHLVVELTAAGRAVVHDIDEHRRAEIAAVLGRV- 122
Query 133 PAER 136
PA R
Sbjct 123 PAGR 126
>gi|326328187|gb|ADZ54162.1| EstGX1 [uncultured bacterium]
Length=210
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/138 (41%), Positives = 78/138 (57%), Gaps = 1/138 (0%)
Query 15 DVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPS 74
D +T+A++ ASR +VAI+ S+ + +T+PQ+RTLV+L+ +G LA LA L V PS
Sbjct 62 DEVTEAIIQASRAMVAIAVRSLGAGGDEVTLPQYRTLVVLT-YGKRRLADLAEALAVSPS 120
Query 75 ATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPA 134
RM DRLV LI R RRE+ +T GR VV V E RR E+ ++E +
Sbjct 121 TATRMCDRLVRKGLISRSRDEIDRREVNLEVTASGRKVVADVIERRRAEVRTVLEGIPVE 180
Query 135 ERHGLVRALTAFTEAGGE 152
R LV +L A G+
Sbjct 181 ARRPLVDSLYVLAAAAGQ 198
>gi|315095200|gb|EFT67176.1| transcriptional regulator, MarR family [Propionibacterium acnes
HL060PA1]
Length=291
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/128 (40%), Positives = 74/128 (58%), Gaps = 1/128 (0%)
Query 22 LTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVD 81
L AS LV ++A S+A++ E+++ PQ+R LV++ + G LA L V S RMV+
Sbjct 145 LQASWALVDVAARSLAELAEDVSAPQYRLLVLI-DAGVTRGVDLARDLDVHSSTIARMVE 203
Query 82 RLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVR 141
RLV LIDR P P RR + +LT RG +V+ V EHRR ++ ++ + P E +V
Sbjct 204 RLVAKGLIDRSPDPDDRRANVLSLTNRGATLVQNVNEHRRRQLVDLLSYLEPGEIDTVVT 263
Query 142 ALTAFTEA 149
T FT A
Sbjct 264 GFTLFTRA 271
>gi|282854534|ref|ZP_06263870.1| transcriptional regulator, MarR family [Propionibacterium acnes
J139]
gi|282582395|gb|EFB87776.1| transcriptional regulator, MarR family [Propionibacterium acnes
J139]
Length=168
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/128 (40%), Positives = 74/128 (58%), Gaps = 1/128 (0%)
Query 22 LTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVD 81
L AS LV ++A S+A++ E+++ PQ+R LV++ + G LA L V S RMV+
Sbjct 22 LQASWALVDVAARSLAELAEDVSAPQYRLLVLI-DAGVTRGVDLARDLDVHSSTIARMVE 80
Query 82 RLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVR 141
RLV LIDR P P RR + +LT RG +V+ V EHRR ++ ++ + P E +V
Sbjct 81 RLVAKGLIDRSPDPDDRRANVLSLTNRGATLVQNVNEHRRRQLVDLLSYLEPGEIDTVVT 140
Query 142 ALTAFTEA 149
T FT A
Sbjct 141 GFTLFTRA 148
>gi|50843686|ref|YP_056913.1| MarR family transcriptional regulator [Propionibacterium acnes
KPA171202]
gi|50841288|gb|AAT83955.1| putative MarR-family transcriptional regulator [Propionibacterium
acnes KPA171202]
Length=174
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/128 (40%), Positives = 74/128 (58%), Gaps = 1/128 (0%)
Query 22 LTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVD 81
L AS L+ ++A S+A++ E+++ PQ+R LV++ + G LA L V S RMV+
Sbjct 28 LQASWALIDVAARSLAELAEDVSAPQYRLLVLI-DAGVTRGVDLARDLEVHSSTIARMVE 86
Query 82 RLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVR 141
RLV IDR P P RR + +LTKRG +V+ V EHRR ++ ++ + P E +V
Sbjct 87 RLVAKGFIDRSPDPDDRRANVLSLTKRGATLVQNVNEHRRRQLVDLLSHLEPGEIDTVVT 146
Query 142 ALTAFTEA 149
T FT A
Sbjct 147 GFTLFTRA 154
>gi|314965972|gb|EFT10071.1| transcriptional regulator, MarR family [Propionibacterium acnes
HL082PA2]
gi|314980705|gb|EFT24799.1| transcriptional regulator, MarR family [Propionibacterium acnes
HL110PA3]
gi|315090976|gb|EFT62952.1| transcriptional regulator, MarR family [Propionibacterium acnes
HL110PA4]
gi|327328828|gb|EGE70588.1| transcriptional regulator, MarR family [Propionibacterium acnes
HL103PA1]
Length=166
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/128 (40%), Positives = 74/128 (58%), Gaps = 1/128 (0%)
Query 22 LTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVD 81
L AS LV ++A S+A++ E+++ PQ+R LV++ + G LA L V S RMV+
Sbjct 20 LQASWALVDVAARSLAELAEDVSAPQYRLLVLI-DAGVTRGVDLARDLDVHSSTIARMVE 78
Query 82 RLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVR 141
RLV LIDR P P RR + +LT RG +V+ V EHRR ++ ++ + P E +V
Sbjct 79 RLVAKGLIDRSPDPDDRRANVLSLTNRGATLVQNVNEHRRRQLVDLLSYLEPGEIDTVVT 138
Query 142 ALTAFTEA 149
T FT A
Sbjct 139 GFTLFTRA 146
Lambda K H
0.319 0.133 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127750398496
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40