BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1408
Length=232
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608546|ref|NP_215924.1| ribulose-phosphate 3-epimerase [Myc... 460 6e-128
gi|289753490|ref|ZP_06512868.1| ribulose-phosphate 3-epimerase r... 460 9e-128
gi|15840866|ref|NP_335903.1| ribulose-phosphate 3-epimerase [Myc... 456 8e-127
gi|118617419|ref|YP_905751.1| ribulose-phosphate 3-epimerase [My... 416 1e-114
gi|183982230|ref|YP_001850521.1| ribulose-phosphate 3-epimerase ... 412 2e-113
gi|296170730|ref|ZP_06852303.1| ribulose-phosphate 3-epimerase [... 407 6e-112
gi|118463895|ref|YP_882552.1| ribulose-phosphate 3-epimerase [My... 402 1e-110
gi|41407233|ref|NP_960069.1| ribulose-phosphate 3-epimerase [Myc... 400 9e-110
gi|240172783|ref|ZP_04751442.1| ribulose-phosphate 3-epimerase [... 400 1e-109
gi|254822404|ref|ZP_05227405.1| ribulose-phosphate 3-epimerase [... 399 3e-109
gi|342858685|ref|ZP_08715340.1| ribulose-phosphate 3-epimerase [... 396 2e-108
gi|118468662|ref|YP_887382.1| ribulose-phosphate 3-epimerase [My... 386 1e-105
gi|333990930|ref|YP_004523544.1| ribulose-phosphate 3-epimerase ... 385 3e-105
gi|145224310|ref|YP_001134988.1| ribulose-phosphate 3-epimerase ... 381 4e-104
gi|108799352|ref|YP_639549.1| ribulose-phosphate 3-epimerase [My... 380 8e-104
gi|120403673|ref|YP_953502.1| ribulose-phosphate 3-epimerase [My... 380 1e-103
gi|15827205|ref|NP_301468.1| ribulose-phosphate 3-epimerase [Myc... 374 4e-102
gi|169629893|ref|YP_001703542.1| ribulose-phosphate 3-epimerase ... 373 1e-101
gi|226306506|ref|YP_002766466.1| ribulose-5-phosphate 3-epimeras... 371 5e-101
gi|229493493|ref|ZP_04387278.1| ribulose-phosphate 3-epimerase [... 369 2e-100
gi|111024117|ref|YP_707089.1| ribulose-phosphate 3-epimerase [Rh... 367 6e-100
gi|312139592|ref|YP_004006928.1| ribulose-phosphate 3-epimerase ... 367 7e-100
gi|226366357|ref|YP_002784140.1| ribulose-phosphate 3-epimerase ... 366 1e-99
gi|333919546|ref|YP_004493127.1| Ribulose-5-phosphate 3-epimeras... 366 2e-99
gi|54025573|ref|YP_119815.1| ribulose-phosphate 3-epimerase [Noc... 363 1e-98
gi|343924570|ref|ZP_08764118.1| ribulose-5-phosphate 3-epimerase... 353 8e-96
gi|262202279|ref|YP_003273487.1| ribulose-phosphate 3-epimerase ... 348 4e-94
gi|326382171|ref|ZP_08203863.1| ribulose-phosphate 3-epimerase [... 345 3e-93
gi|134098690|ref|YP_001104351.1| ribulose-phosphate 3-epimerase ... 338 5e-91
gi|291003623|ref|ZP_06561596.1| ribulose-phosphate 3-epimerase [... 335 4e-90
gi|331697234|ref|YP_004333473.1| ribulose-phosphate 3-epimerase ... 330 1e-88
gi|302525887|ref|ZP_07278229.1| ribulose-phosphate 3-epimerase [... 330 1e-88
gi|296140263|ref|YP_003647506.1| ribulose-phosphate 3-epimerase ... 329 2e-88
gi|324999325|ref|ZP_08120437.1| ribulose-phosphate 3-epimerase [... 327 6e-88
gi|256379227|ref|YP_003102887.1| ribulose-phosphate 3-epimerase ... 322 3e-86
gi|300784677|ref|YP_003764968.1| ribulose-phosphate 3-epimerase ... 321 5e-86
gi|257055600|ref|YP_003133432.1| ribulose-phosphate 3-epimerase ... 318 5e-85
gi|317508960|ref|ZP_07966593.1| ribulose-phosphate 3-epimerase [... 317 6e-85
gi|284991538|ref|YP_003410092.1| ribulose-phosphate 3-epimerase ... 306 1e-81
gi|296395035|ref|YP_003659919.1| ribulose-phosphate 3-epimerase ... 305 3e-81
gi|258654275|ref|YP_003203431.1| ribulose-phosphate 3-epimerase ... 299 2e-79
gi|325002921|ref|ZP_08124033.1| ribulose-phosphate 3-epimerase [... 293 1e-77
gi|330466986|ref|YP_004404729.1| ribulose-phosphate 3-epimerase ... 293 2e-77
gi|345010704|ref|YP_004813058.1| ribulose-phosphate 3-epimerase ... 292 2e-77
gi|337769329|emb|CCB78042.1| ribulose-5-phosphate 3-epimerase [S... 289 2e-76
gi|21219966|ref|NP_625745.1| ribulose-phosphate 3-epimerase [Str... 288 5e-76
gi|291440811|ref|ZP_06580201.1| ribulose-phosphate 3-epimerase [... 287 7e-76
gi|302866837|ref|YP_003835474.1| ribulose-phosphate 3-epimerase ... 287 9e-76
gi|297198308|ref|ZP_06915705.1| ribulose-phosphate 3-epimerase [... 287 1e-75
gi|326440080|ref|ZP_08214814.1| ribulose-phosphate 3-epimerase [... 286 1e-75
>gi|15608546|ref|NP_215924.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Rv]
gi|31792602|ref|NP_855095.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis AF2122/97]
gi|121637338|ref|YP_977561.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
41 more sequence titles
Length=232
Score = 460 bits (1184), Expect = 6e-128, Method: Compositional matrix adjust.
Identities = 231/232 (99%), Positives = 232/232 (100%), Gaps = 0/232 (0%)
Query 1 VSLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVES 60
+SLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVES
Sbjct 1 MSLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVES 60
Query 61 LLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGIS 120
LLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGIS
Sbjct 61 LLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGIS 120
Query 121 VKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEI 180
VKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEI
Sbjct 121 VKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEI 180
Query 181 DGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
DGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL
Sbjct 181 DGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
>gi|289753490|ref|ZP_06512868.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
EAS054]
gi|289694077|gb|EFD61506.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
EAS054]
Length=233
Score = 460 bits (1183), Expect = 9e-128, Method: Compositional matrix adjust.
Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 2 SLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESL 61
SLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESL
Sbjct 3 SLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESL 62
Query 62 LAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISV 121
LAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISV
Sbjct 63 LAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISV 122
Query 122 KPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEID 181
KPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEID
Sbjct 123 KPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEID 182
Query 182 GGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
GGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL
Sbjct 183 GGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 233
>gi|15840866|ref|NP_335903.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis CDC1551]
gi|167968447|ref|ZP_02550724.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Ra]
gi|254231650|ref|ZP_04924977.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
C]
33 more sequence titles
Length=229
Score = 456 bits (1174), Expect = 8e-127, Method: Compositional matrix adjust.
Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)
Query 4 MAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLA 63
MAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLA
Sbjct 1 MAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLA 60
Query 64 VTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKP 123
VTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKP
Sbjct 61 VTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKP 120
Query 124 GTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGG 183
GTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGG
Sbjct 121 GTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGG 180
Query 184 INDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
INDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL
Sbjct 181 INDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 229
>gi|118617419|ref|YP_905751.1| ribulose-phosphate 3-epimerase [Mycobacterium ulcerans Agy99]
gi|118569529|gb|ABL04280.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium ulcerans Agy99]
Length=232
Score = 416 bits (1069), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 204/229 (90%), Positives = 215/229 (94%), Gaps = 0/229 (0%)
Query 1 VSLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVES 60
+SLM S GGP+IAPSIL+ADFARLADEAAAV GADWLHVDVMDGHFVPNLT+GLPVVES
Sbjct 1 MSLMPNSIGGPMIAPSILSADFARLADEAAAVRGADWLHVDVMDGHFVPNLTLGLPVVES 60
Query 61 LLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGIS 120
LLA +DIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNP+ VARDIRAAGAKAG S
Sbjct 61 LLAASDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPIAVARDIRAAGAKAGSS 120
Query 121 VKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEI 180
VKPGTPL+PYL+ILPHFDTLLVMSVEPGFGGQ FIPEVLSKVR VRK+VD+GELTIL+EI
Sbjct 121 VKPGTPLDPYLEILPHFDTLLVMSVEPGFGGQSFIPEVLSKVRTVRKLVDSGELTILIEI 180
Query 181 DGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLH 229
DGGIN DTIEQAAEAGVDCFVAGSAVYGA DPAAAV ALRRQAGA S H
Sbjct 181 DGGINADTIEQAAEAGVDCFVAGSAVYGAQDPAAAVEALRRQAGAVSSH 229
>gi|183982230|ref|YP_001850521.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium marinum M]
gi|183175556|gb|ACC40666.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium marinum M]
Length=229
Score = 412 bits (1060), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 202/226 (90%), Positives = 212/226 (94%), Gaps = 0/226 (0%)
Query 4 MAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLA 63
M S GGP+IAPSIL+ADFARLADEAAAV GADWLHVDVMDGHFVPNLT+GLPVVESLLA
Sbjct 1 MPNSIGGPMIAPSILSADFARLADEAAAVRGADWLHVDVMDGHFVPNLTLGLPVVESLLA 60
Query 64 VTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKP 123
+DIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNP+ VARDIRAAGAKAG SVKP
Sbjct 61 ASDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPIAVARDIRAAGAKAGFSVKP 120
Query 124 GTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGG 183
GTPL+PYL+ILPHFDTLLVMSVEPGFGGQ FIPEVLSKVR VRK+VD+GELTIL+EIDGG
Sbjct 121 GTPLDPYLEILPHFDTLLVMSVEPGFGGQSFIPEVLSKVRTVRKLVDSGELTILIEIDGG 180
Query 184 INDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLH 229
IN DTIEQAAEAGVDCFVAGSAVYGA DPAAAV ALRRQAGA S H
Sbjct 181 INADTIEQAAEAGVDCFVAGSAVYGAQDPAAAVEALRRQAGAVSSH 226
>gi|296170730|ref|ZP_06852303.1| ribulose-phosphate 3-epimerase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894613|gb|EFG74349.1| ribulose-phosphate 3-epimerase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=229
Score = 407 bits (1046), Expect = 6e-112, Method: Compositional matrix adjust.
Identities = 203/227 (90%), Positives = 212/227 (94%), Gaps = 0/227 (0%)
Query 4 MAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLA 63
MAG+ G PLIAPSIL+ADFARLADEAAAV GADWLHVDVMD HFVPNLTIGLPVVESLLA
Sbjct 1 MAGNPGRPLIAPSILSADFARLADEAAAVVGADWLHVDVMDNHFVPNLTIGLPVVESLLA 60
Query 64 VTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKP 123
T IPMDCHLMI++PDRWAP YAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKP
Sbjct 61 ATTIPMDCHLMIEDPDRWAPGYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKP 120
Query 124 GTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGG 183
GTPLEPYL+ILP FDTLL+MSVEPGFGGQ FIPEVLSKVR RK++DAGELTILVEIDGG
Sbjct 121 GTPLEPYLEILPQFDTLLIMSVEPGFGGQSFIPEVLSKVRTARKLIDAGELTILVEIDGG 180
Query 184 INDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHL 230
INDDTIEQAAEAGVDCFVAGSAVYGA+DP AAVAALRRQA A S HL
Sbjct 181 INDDTIEQAAEAGVDCFVAGSAVYGAEDPEAAVAALRRQAAAVSPHL 227
>gi|118463895|ref|YP_882552.1| ribulose-phosphate 3-epimerase [Mycobacterium avium 104]
gi|254775816|ref|ZP_05217332.1| ribulose-phosphate 3-epimerase [Mycobacterium avium subsp. avium
ATCC 25291]
gi|118165182|gb|ABK66079.1| ribulose-phosphate 3-epimerase [Mycobacterium avium 104]
gi|336461620|gb|EGO40485.1| ribulose-phosphate 3-epimerase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=232
Score = 402 bits (1034), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 198/225 (88%), Positives = 208/225 (93%), Gaps = 0/225 (0%)
Query 6 GSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVT 65
G GPLIAPSIL+ADF+RLADEAAAV GADWLHVDVMD HFVPNLTIGLPVV+SLLA T
Sbjct 6 GQPRGPLIAPSILSADFSRLADEAAAVTGADWLHVDVMDNHFVPNLTIGLPVVQSLLATT 65
Query 66 DIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGT 125
IPMDCHLMI+NPDRWAPPYAEAGA+NVTFHAEATDNP+GVARDIRAAGAKAGISVKPGT
Sbjct 66 TIPMDCHLMIENPDRWAPPYAEAGAHNVTFHAEATDNPIGVARDIRAAGAKAGISVKPGT 125
Query 126 PLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIN 185
PLEPYL+ILP FDTLL+MSVEPGFGGQ FIPEVL KVR RK++DAGELTILVEIDGGIN
Sbjct 126 PLEPYLEILPQFDTLLIMSVEPGFGGQSFIPEVLGKVRTARKLIDAGELTILVEIDGGIN 185
Query 186 DDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHL 230
DTIEQAAEAGVDCFVAGSAVYGADDPAAAV ALRRQA AS HL
Sbjct 186 ADTIEQAAEAGVDCFVAGSAVYGADDPAAAVEALRRQALGASQHL 230
>gi|41407233|ref|NP_960069.1| ribulose-phosphate 3-epimerase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395584|gb|AAS03452.1| Rpe [Mycobacterium avium subsp. paratuberculosis K-10]
Length=232
Score = 400 bits (1027), Expect = 9e-110, Method: Compositional matrix adjust.
Identities = 197/225 (88%), Positives = 207/225 (92%), Gaps = 0/225 (0%)
Query 6 GSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVT 65
G GPLIAPSIL+ADF+RLADEAAAV GADWLHVDVMD HFVPNLTIGLPVV+SLLA T
Sbjct 6 GQPRGPLIAPSILSADFSRLADEAAAVTGADWLHVDVMDNHFVPNLTIGLPVVQSLLATT 65
Query 66 DIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGT 125
IPMDCHLMI+NPDRWAPPYAEAGA+NVTFHAEATDNP+GVARDIRAAGAKAGISVKPGT
Sbjct 66 TIPMDCHLMIENPDRWAPPYAEAGAHNVTFHAEATDNPIGVARDIRAAGAKAGISVKPGT 125
Query 126 PLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIN 185
PLEPYL+ILP FDTLL+MSVEPGFGGQ FIPEVL KVR RK++DAGELTILVEIDGGIN
Sbjct 126 PLEPYLEILPQFDTLLIMSVEPGFGGQSFIPEVLGKVRTARKLIDAGELTILVEIDGGIN 185
Query 186 DDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHL 230
DTIEQAAEAGVDCFVAG AVYGADDPAAAV ALRRQA AS HL
Sbjct 186 ADTIEQAAEAGVDCFVAGLAVYGADDPAAAVEALRRQALGASQHL 230
>gi|240172783|ref|ZP_04751442.1| ribulose-phosphate 3-epimerase [Mycobacterium kansasii ATCC 12478]
Length=221
Score = 400 bits (1027), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 196/218 (90%), Positives = 210/218 (97%), Gaps = 0/218 (0%)
Query 12 LIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDC 71
+IAPSILAADFARLADEAAAV+GADWLHVDVMDGHFVPNLTIGLPVVESLLAV+ IPMDC
Sbjct 1 MIAPSILAADFARLADEAAAVHGADWLHVDVMDGHFVPNLTIGLPVVESLLAVSRIPMDC 60
Query 72 HLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYL 131
HLMI+NPDRWAPPYAEAGA+NVTFHAEA DNPVGVARDIRAAGAKAGISVKPGTPL+PYL
Sbjct 61 HLMIENPDRWAPPYAEAGAHNVTFHAEAADNPVGVARDIRAAGAKAGISVKPGTPLDPYL 120
Query 132 DILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQ 191
+ILPHFDTLLVMSVEPGFGGQ+FIPEVLSKVR VRKMVD+GELTIL+EIDGG+N DTIEQ
Sbjct 121 EILPHFDTLLVMSVEPGFGGQKFIPEVLSKVRTVRKMVDSGELTILIEIDGGVNADTIEQ 180
Query 192 AAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLH 229
AAEAGVDCFVAGSAVYGAD+PA AV ALR++A AAS H
Sbjct 181 AAEAGVDCFVAGSAVYGADNPATAVEALRQRARAASHH 218
>gi|254822404|ref|ZP_05227405.1| ribulose-phosphate 3-epimerase [Mycobacterium intracellulare
ATCC 13950]
Length=247
Score = 399 bits (1024), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 197/232 (85%), Positives = 211/232 (91%), Gaps = 3/232 (1%)
Query 1 VSLMAGST---GGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPV 57
++LMAG+T GPLIAPSIL+ADF+RLADEAAAV GADWLHVDVMD HFVPNLT+GLPV
Sbjct 13 LALMAGNTESSKGPLIAPSILSADFSRLADEAAAVTGADWLHVDVMDNHFVPNLTLGLPV 72
Query 58 VESLLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKA 117
VESLLA T IPMDCHLMI++PDRWAPPYAEAGAYNVTFHAEAT NP+ VARDIRAAGAKA
Sbjct 73 VESLLAATTIPMDCHLMIEDPDRWAPPYAEAGAYNVTFHAEATQNPIAVARDIRAAGAKA 132
Query 118 GISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTIL 177
GISVKPGTPLEPYL+ILP FDTLL+MSVEPGFGGQ FIPEVLSKVR RK++DAGELTIL
Sbjct 133 GISVKPGTPLEPYLEILPQFDTLLIMSVEPGFGGQSFIPEVLSKVRTARKLIDAGELTIL 192
Query 178 VEIDGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLH 229
VEIDGGIN DTIEQAAEAGVDCFVAGSAVYGA DP A+ ALRRQA AAS H
Sbjct 193 VEIDGGINGDTIEQAAEAGVDCFVAGSAVYGAADPETAIDALRRQAAAASPH 244
>gi|342858685|ref|ZP_08715340.1| ribulose-phosphate 3-epimerase [Mycobacterium colombiense CECT
3035]
gi|342134389|gb|EGT87569.1| ribulose-phosphate 3-epimerase [Mycobacterium colombiense CECT
3035]
Length=232
Score = 396 bits (1017), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 192/221 (87%), Positives = 204/221 (93%), Gaps = 0/221 (0%)
Query 10 GPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 69
GPLIAPSILAADF+RLADEAAAV GADWLHVDVMD HFVPNLT+GLPVVESLLA T IPM
Sbjct 10 GPLIAPSILAADFSRLADEAAAVTGADWLHVDVMDNHFVPNLTLGLPVVESLLAATTIPM 69
Query 70 DCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEP 129
DCHLMI++PDRWAPPYAEAGAYNVTFHAEAT NP+ VARDIRAAGAKAGISVKPGTPLEP
Sbjct 70 DCHLMIEDPDRWAPPYAEAGAYNVTFHAEATQNPIAVARDIRAAGAKAGISVKPGTPLEP 129
Query 130 YLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTI 189
YL+ILP FDTLL+MSVEPGFGGQ FIPEVLSKVR RK+++AGELTILVEIDGGIN DTI
Sbjct 130 YLEILPQFDTLLIMSVEPGFGGQSFIPEVLSKVRTARKLIEAGELTILVEIDGGINADTI 189
Query 190 EQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHL 230
EQAAEAGVDCFVAGSAVYG +DP AA+ ALRRQA AS HL
Sbjct 190 EQAAEAGVDCFVAGSAVYGTEDPEAAIEALRRQAAGASPHL 230
>gi|118468662|ref|YP_887382.1| ribulose-phosphate 3-epimerase [Mycobacterium smegmatis str.
MC2 155]
gi|118169949|gb|ABK70845.1| ribulose-phosphate 3-epimerase [Mycobacterium smegmatis str.
MC2 155]
Length=225
Score = 386 bits (992), Expect = 1e-105, Method: Compositional matrix adjust.
Identities = 189/222 (86%), Positives = 203/222 (92%), Gaps = 0/222 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
PLIAPSILAADFARLADE AAV ADWLHVDVMD HFVPNLT+GLPVVESLL VTD PMD
Sbjct 4 PLIAPSILAADFARLADEVAAVGDADWLHVDVMDNHFVPNLTLGLPVVESLLKVTDTPMD 63
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMI+NP+RWAP YAEAGAYNVTFHAEATDNP+ VARDIRAAGAKAG+SVKPGTPLEPY
Sbjct 64 CHLMIENPERWAPGYAEAGAYNVTFHAEATDNPIAVARDIRAAGAKAGLSVKPGTPLEPY 123
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L+IL FDTLLVMSVEPGFGGQ+FIPEVL+KV R++VD+GELT++VEIDGGIN DTIE
Sbjct 124 LEILREFDTLLVMSVEPGFGGQKFIPEVLAKVATARRLVDSGELTVVVEIDGGINADTIE 183
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
QAAEAGVDCFVAGSAVY A+DPAAAV ALRRQA AS HLSL
Sbjct 184 QAAEAGVDCFVAGSAVYSAEDPAAAVEALRRQAAGASKHLSL 225
>gi|333990930|ref|YP_004523544.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium sp. JDM601]
gi|333486898|gb|AEF36290.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium sp. JDM601]
Length=225
Score = 385 bits (989), Expect = 3e-105, Method: Compositional matrix adjust.
Identities = 188/220 (86%), Positives = 205/220 (94%), Gaps = 0/220 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
P+IAPSIL+ADFARLA+EA AV GADWLHVDVMD HFVPNLTIGLPVVESLLA TDIPMD
Sbjct 4 PMIAPSILSADFARLAEEANAVKGADWLHVDVMDAHFVPNLTIGLPVVESLLAATDIPMD 63
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMI++P RWAPPYAEAGAYNVTFHAEATD+P+ VARDIRAAGA+AG+S+KPGTPLEPY
Sbjct 64 CHLMIEDPGRWAPPYAEAGAYNVTFHAEATDDPIAVARDIRAAGARAGLSIKPGTPLEPY 123
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L+IL +FDTLLVMSVEPGFGGQ FIPEVLSKVR VRK+VDAGEL+ILVEIDGGIN DT+E
Sbjct 124 LEILRNFDTLLVMSVEPGFGGQSFIPEVLSKVRTVRKLVDAGELSILVEIDGGINADTVE 183
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHL 230
QAAEAGVDCFVAGSAVY A+DP AAV +LRRQA AAS HL
Sbjct 184 QAAEAGVDCFVAGSAVYSAEDPGAAVESLRRQALAASPHL 223
>gi|145224310|ref|YP_001134988.1| ribulose-phosphate 3-epimerase [Mycobacterium gilvum PYR-GCK]
gi|315444642|ref|YP_004077521.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. Spyr1]
gi|145216796|gb|ABP46200.1| ribulose-5-phosphate 3-epimerase [Mycobacterium gilvum PYR-GCK]
gi|315262945|gb|ADT99686.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. Spyr1]
Length=225
Score = 381 bits (979), Expect = 4e-104, Method: Compositional matrix adjust.
Identities = 186/222 (84%), Positives = 204/222 (92%), Gaps = 0/222 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
PLIAPSILAADFARLA+EAAAV+GADWLHVDVMD HFVPNLT+GLPVVESLL VTDIPMD
Sbjct 4 PLIAPSILAADFARLAEEAAAVDGADWLHVDVMDNHFVPNLTLGLPVVESLLKVTDIPMD 63
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMI+NP+RWAPPYAEAGAYNVT HAEATDNPV VARDIRAAGAKAG+S+KPGTP+EPY
Sbjct 64 CHLMIENPERWAPPYAEAGAYNVTIHAEATDNPVAVARDIRAAGAKAGLSIKPGTPIEPY 123
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L+IL FDTLLVMSVEPGFGGQ+FI EVL KV R++VD+GELTI++EIDGGIN DTIE
Sbjct 124 LEILREFDTLLVMSVEPGFGGQKFIAEVLPKVGIARRLVDSGELTIVIEIDGGINADTIE 183
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
+AAEAGVDCFVAGSAVY A+DPAAAV +LR QA AAS HL L
Sbjct 184 EAAEAGVDCFVAGSAVYSAEDPAAAVQSLRSQAAAASRHLVL 225
>gi|108799352|ref|YP_639549.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. MCS]
gi|119868468|ref|YP_938420.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. KMS]
gi|126435010|ref|YP_001070701.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. JLS]
gi|108769771|gb|ABG08493.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. MCS]
gi|119694557|gb|ABL91630.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. KMS]
gi|126234810|gb|ABN98210.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. JLS]
Length=224
Score = 380 bits (976), Expect = 8e-104, Method: Compositional matrix adjust.
Identities = 185/221 (84%), Positives = 203/221 (92%), Gaps = 0/221 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
PLIAPSIL+ADFARLADE AAV GADWLHVDVMD HFVPNLT+GLPVVESLL VTDIPMD
Sbjct 4 PLIAPSILSADFARLADETAAVTGADWLHVDVMDNHFVPNLTLGLPVVESLLKVTDIPMD 63
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMI+NP+RWAPPYAEAGA+NVTFHAEATDNP+ VARDIRAAGAKAG++VKPGTP++PY
Sbjct 64 CHLMIENPERWAPPYAEAGAHNVTFHAEATDNPIAVARDIRAAGAKAGLAVKPGTPIDPY 123
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L+IL FDTLLVMSVEPGFGGQ+FIPEVL KV VR++VD+GELT+LVEIDGGIN+DTI
Sbjct 124 LEILREFDTLLVMSVEPGFGGQKFIPEVLPKVGIVRRLVDSGELTVLVEIDGGINEDTIA 183
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLS 231
AAEAGVDCFVAGSAVY A DPAAAV +LR QA AAS HLS
Sbjct 184 AAAEAGVDCFVAGSAVYSAQDPAAAVRSLREQAAAASKHLS 224
>gi|120403673|ref|YP_953502.1| ribulose-phosphate 3-epimerase [Mycobacterium vanbaalenii PYR-1]
gi|119956491|gb|ABM13496.1| ribulose-5-phosphate 3-epimerase [Mycobacterium vanbaalenii PYR-1]
Length=234
Score = 380 bits (975), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 186/222 (84%), Positives = 200/222 (91%), Gaps = 0/222 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
PLIAPSILAADFARLA+E AAV GADWLHVDVMD HFVPNLT+GLPVVESLL TDIPMD
Sbjct 13 PLIAPSILAADFARLAEETAAVEGADWLHVDVMDNHFVPNLTLGLPVVESLLKATDIPMD 72
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMI+NP+RWAPPYAEAGAYNVT HAEATDNPV VARDIRAAGAKAG+SVKPGTPLEPY
Sbjct 73 CHLMIENPERWAPPYAEAGAYNVTIHAEATDNPVAVARDIRAAGAKAGLSVKPGTPLEPY 132
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L IL FDTLLVMSVEPGFGGQ+FI EVL KV R++VDAGELTI++EIDGGIN DTIE
Sbjct 133 LQILREFDTLLVMSVEPGFGGQKFIAEVLPKVGIARRLVDAGELTIVIEIDGGINADTIE 192
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
AAEAGVDCFVAGSAVY A DPAAAV +LR+QA +AS HL+L
Sbjct 193 AAAEAGVDCFVAGSAVYSAQDPAAAVHSLRKQAASASKHLTL 234
>gi|15827205|ref|NP_301468.1| ribulose-phosphate 3-epimerase [Mycobacterium leprae TN]
gi|221229683|ref|YP_002503099.1| ribulose-phosphate 3-epimerase [Mycobacterium leprae Br4923]
gi|17380276|sp|Q9CCP9.1|RPE_MYCLE RecName: Full=Ribulose-phosphate 3-epimerase; AltName: Full=Pentose-5-phosphate
3-epimerase; Short=PPE; AltName: Full=R5P3E
gi|13092753|emb|CAC30062.1| putatibe ribulose-phosphate 3-epimerase [Mycobacterium leprae]
gi|219932790|emb|CAR70647.1| putatibe ribulose-phosphate 3-epimerase [Mycobacterium leprae
Br4923]
Length=224
Score = 374 bits (961), Expect = 4e-102, Method: Compositional matrix adjust.
Identities = 184/199 (93%), Positives = 187/199 (94%), Gaps = 0/199 (0%)
Query 10 GPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 69
GPLIAPSILAADFARL DEAA V ADWLHVDVMDGHFVPNLTIGLPVV+SLLA +DIPM
Sbjct 2 GPLIAPSILAADFARLTDEAAVVASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPM 61
Query 70 DCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEP 129
DCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVA DIR AGAKAGI VKPGTPL P
Sbjct 62 DCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVAHDIRTAGAKAGIGVKPGTPLNP 121
Query 130 YLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTI 189
YLDILPHFDTLL+MSVEPGFGGQ FIPEVLSKVR VRKMVDAGELTILVEIDGGIN DTI
Sbjct 122 YLDILPHFDTLLIMSVEPGFGGQAFIPEVLSKVRTVRKMVDAGELTILVEIDGGINADTI 181
Query 190 EQAAEAGVDCFVAGSAVYG 208
EQAAEAGVDCFVAGSAVYG
Sbjct 182 EQAAEAGVDCFVAGSAVYG 200
>gi|169629893|ref|YP_001703542.1| ribulose-phosphate 3-epimerase [Mycobacterium abscessus ATCC
19977]
gi|169241860|emb|CAM62888.1| Ribulose-phosphate 3-epimerase [Mycobacterium abscessus]
Length=227
Score = 373 bits (958), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 182/216 (85%), Positives = 198/216 (92%), Gaps = 0/216 (0%)
Query 7 STGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTD 66
S P+IAPSIL+ADFARLA+E AAV GADWLHVDVMDGHFVPNLT+GLPVV+SLLA TD
Sbjct 2 SHRAPMIAPSILSADFARLAEEMAAVEGADWLHVDVMDGHFVPNLTLGLPVVDSLLAATD 61
Query 67 IPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTP 126
IP+DCHLMIDNPDRWAP YAEAGA+NVTFHAEATDNPVGVARDIRAAGAKAG+S+KPGTP
Sbjct 62 IPIDCHLMIDNPDRWAPGYAEAGAHNVTFHAEATDNPVGVARDIRAAGAKAGLSIKPGTP 121
Query 127 LEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIND 186
LEPYL++L FDTLLVMSVEPGFGGQ FI VL KVRAVRK+VD+GEL++LVEIDGGIN
Sbjct 122 LEPYLEVLKDFDTLLVMSVEPGFGGQSFIASVLDKVRAVRKLVDSGELSVLVEIDGGINT 181
Query 187 DTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQ 222
DTIEQAAEAGVDCFVAGSAVYGA +P AAV ALR Q
Sbjct 182 DTIEQAAEAGVDCFVAGSAVYGAQNPEAAVRALREQ 217
>gi|226306506|ref|YP_002766466.1| ribulose-5-phosphate 3-epimerase [Rhodococcus erythropolis PR4]
gi|226185623|dbj|BAH33727.1| ribulose-5-phosphate 3-epimerase [Rhodococcus erythropolis PR4]
Length=227
Score = 371 bits (952), Expect = 5e-101, Method: Compositional matrix adjust.
Identities = 177/222 (80%), Positives = 200/222 (91%), Gaps = 0/222 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
P+IAPSIL+ADFARLADEA AV+G+DWLHVDVMD HFVPNLT+GLPVVESLL TDIP+D
Sbjct 4 PMIAPSILSADFARLADEATAVSGSDWLHVDVMDAHFVPNLTLGLPVVESLLKATDIPLD 63
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMI+NP+RWAPPYAEAGAYNVTFHAEATD+P VARDIRAAGAKAG+S+KPGTP++ Y
Sbjct 64 CHLMIENPERWAPPYAEAGAYNVTFHAEATDDPRSVARDIRAAGAKAGLSIKPGTPIDDY 123
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L+IL FDTLL+MSVEPGFGGQ F+P+VL K RAVRK+VD+GELT+LVEIDGGIN TIE
Sbjct 124 LEILKDFDTLLIMSVEPGFGGQSFMPQVLDKARAVRKLVDSGELTLLVEIDGGINASTIE 183
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
QAAEAG+DCFVAGSAVYGA DP AV LR QA +AS HL+L
Sbjct 184 QAAEAGIDCFVAGSAVYGASDPGEAVRKLRAQAASASPHLTL 225
>gi|229493493|ref|ZP_04387278.1| ribulose-phosphate 3-epimerase [Rhodococcus erythropolis SK121]
gi|229319454|gb|EEN85290.1| ribulose-phosphate 3-epimerase [Rhodococcus erythropolis SK121]
Length=223
Score = 369 bits (947), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 176/221 (80%), Positives = 199/221 (91%), Gaps = 0/221 (0%)
Query 12 LIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDC 71
+IAPSIL+ADFARLADEA AV+G+DWLHVDVMD HFVPNLT+GLPVVESLL TDIP+DC
Sbjct 1 MIAPSILSADFARLADEATAVSGSDWLHVDVMDAHFVPNLTLGLPVVESLLKATDIPLDC 60
Query 72 HLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYL 131
HLMI+NP+RWAPPYAEAGAYNVTFHAEATD+P VARDIRAAGAKAG+S+KPGTP++ YL
Sbjct 61 HLMIENPERWAPPYAEAGAYNVTFHAEATDDPRSVARDIRAAGAKAGLSIKPGTPIDDYL 120
Query 132 DILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQ 191
+IL FDTLL+MSVEPGFGGQ F+P+VL K RAVRK+VD+GELT+LVEIDGGIN TIEQ
Sbjct 121 EILKDFDTLLIMSVEPGFGGQSFMPQVLDKARAVRKLVDSGELTLLVEIDGGINASTIEQ 180
Query 192 AAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
AAEAG+DCFVAGSAVYGA DP AV LR QA +AS HL+L
Sbjct 181 AAEAGIDCFVAGSAVYGASDPGEAVRKLRAQAASASPHLTL 221
>gi|111024117|ref|YP_707089.1| ribulose-phosphate 3-epimerase [Rhodococcus jostii RHA1]
gi|110823647|gb|ABG98931.1| ribulose-phosphate 3-epimerase [Rhodococcus jostii RHA1]
Length=227
Score = 367 bits (943), Expect = 6e-100, Method: Compositional matrix adjust.
Identities = 180/222 (82%), Positives = 199/222 (90%), Gaps = 0/222 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
P+IAPSIL+ADFARLA+EA AV GADWLHVDVMD HFVPNLT+GLPVV+SLLA TDIP+D
Sbjct 4 PMIAPSILSADFARLAEEADAVAGADWLHVDVMDAHFVPNLTLGLPVVQSLLAATDIPLD 63
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMID+P RWAPPYAEAGA+NVTFHAEATD+P VARDIRAAGAKAG+SVKPGTP+EPY
Sbjct 64 CHLMIDDPGRWAPPYAEAGAHNVTFHAEATDDPRSVARDIRAAGAKAGLSVKPGTPIEPY 123
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L+IL FDTLLVMSVEPGFGGQ FIPEVLSK +AVR++VD+GEL ++VEIDGGIN DT+E
Sbjct 124 LEILKDFDTLLVMSVEPGFGGQSFIPEVLSKAKAVRRLVDSGELRLVVEIDGGINADTVE 183
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
AAEAGVDCFVAGSAVYG DPA AV ALR A AS HLSL
Sbjct 184 AAAEAGVDCFVAGSAVYGTSDPAEAVRALRASAAKASPHLSL 225
>gi|312139592|ref|YP_004006928.1| ribulose-phosphate 3-epimerase [Rhodococcus equi 103S]
gi|325672524|ref|ZP_08152220.1| ribulose-phosphate 3-epimerase [Rhodococcus equi ATCC 33707]
gi|311888931|emb|CBH48244.1| ribulose-phosphate 3-epimerase [Rhodococcus equi 103S]
gi|325556401|gb|EGD26067.1| ribulose-phosphate 3-epimerase [Rhodococcus equi ATCC 33707]
Length=223
Score = 367 bits (942), Expect = 7e-100, Method: Compositional matrix adjust.
Identities = 179/221 (81%), Positives = 198/221 (90%), Gaps = 0/221 (0%)
Query 12 LIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDC 71
+IAPSIL+ADFARLA+EA AV GADWLHVDVMD HFVPNLT+GLPVV+SLL TDIP+DC
Sbjct 1 MIAPSILSADFARLAEEADAVAGADWLHVDVMDAHFVPNLTLGLPVVQSLLKATDIPLDC 60
Query 72 HLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYL 131
HLMID+P RWAPPYAEAGA+NVTFHAEATD+P+ VARDIRAAGAKAG+S+KP TP+EPYL
Sbjct 61 HLMIDDPGRWAPPYAEAGAHNVTFHAEATDDPISVARDIRAAGAKAGLSIKPNTPIEPYL 120
Query 132 DILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQ 191
+IL FDTLLVMSVEPGFGGQ FIP VL K RAVRK+VDAGEL +LVEIDGGIN DT+EQ
Sbjct 121 EILKSFDTLLVMSVEPGFGGQSFIPAVLDKARAVRKLVDAGELRLLVEIDGGINADTVEQ 180
Query 192 AAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
AAEAG+DCFVAGSAVYGA DPAAAV LR QA AS HL+L
Sbjct 181 AAEAGIDCFVAGSAVYGAADPAAAVRGLREQAAKASPHLTL 221
>gi|226366357|ref|YP_002784140.1| ribulose-phosphate 3-epimerase [Rhodococcus opacus B4]
gi|226244847|dbj|BAH55195.1| ribulose-5-phosphate 3-epimerase [Rhodococcus opacus B4]
Length=227
Score = 366 bits (940), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/222 (82%), Positives = 198/222 (90%), Gaps = 0/222 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
P+IAPSIL+ADFARLA+EA AV GADWLHVDVMD HFVPNLT+GLPVV SLLA TDIP+D
Sbjct 4 PMIAPSILSADFARLAEEADAVAGADWLHVDVMDAHFVPNLTLGLPVVTSLLAATDIPLD 63
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMID+P RWAPPYAEAGA+NVTFHAEATD+P VARDIRAAGAKAG+SVKPGTP+EPY
Sbjct 64 CHLMIDDPGRWAPPYAEAGAHNVTFHAEATDDPRSVARDIRAAGAKAGLSVKPGTPIEPY 123
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L+IL FDTLLVMSVEPGFGGQ FIPEVLSK +AVR++VD+GEL ++VEIDGGIN DT+E
Sbjct 124 LEILKDFDTLLVMSVEPGFGGQSFIPEVLSKAKAVRRLVDSGELRLVVEIDGGINSDTVE 183
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
AAEAGVDCFVAGSAVYG DPA AV ALR A AS HLSL
Sbjct 184 AAAEAGVDCFVAGSAVYGTGDPAEAVRALRASAAKASPHLSL 225
>gi|333919546|ref|YP_004493127.1| Ribulose-5-phosphate 3-epimerase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481767|gb|AEF40327.1| Ribulose-5-phosphate 3-epimerase [Amycolicicoccus subflavus DQS3-9A1]
Length=221
Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/221 (80%), Positives = 198/221 (90%), Gaps = 0/221 (0%)
Query 12 LIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDC 71
+IAPSIL+ADFA LADEA AV GADWLHVDVMD HFVPNLT+GLP+VESLL T IP+DC
Sbjct 1 MIAPSILSADFAHLADEADAVKGADWLHVDVMDAHFVPNLTLGLPIVESLLKATTIPLDC 60
Query 72 HLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYL 131
HLMI+NPDRWAPPYAEAGAYNVTFHAEATDNPV VARDIRAAGAKAG+S+KP TPL+PYL
Sbjct 61 HLMIENPDRWAPPYAEAGAYNVTFHAEATDNPVAVARDIRAAGAKAGLSIKPNTPLDPYL 120
Query 132 DILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQ 191
+IL FDTLLVMSVEPGFGGQ+F+P+VL K R VR +VD+GELT+LVEIDGGIN DT+E
Sbjct 121 EILREFDTLLVMSVEPGFGGQKFMPQVLDKARRVRNLVDSGELTLLVEIDGGINMDTVEA 180
Query 192 AAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL 232
AAEAGVDCFVAGSAVYGADDP+AAV LR +A +S HL++
Sbjct 181 AAEAGVDCFVAGSAVYGADDPSAAVEKLRSRARHSSPHLAI 221
>gi|54025573|ref|YP_119815.1| ribulose-phosphate 3-epimerase [Nocardia farcinica IFM 10152]
gi|54017081|dbj|BAD58451.1| putative ribulose-5-phosphate 3-epimerase [Nocardia farcinica
IFM 10152]
Length=227
Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/216 (81%), Positives = 192/216 (89%), Gaps = 0/216 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
P+IAPSIL+ADFA LADEA V G+DWLHVDVMD HFVPNLT+GLPVV+SLL TDIP+D
Sbjct 10 PMIAPSILSADFAHLADEARRVEGSDWLHVDVMDAHFVPNLTLGLPVVQSLLKATDIPLD 69
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMI++P RWAPPYAEAGA+NVTFHAEATD+PV VARDIRAAGAKAG+SVKP TP+EPY
Sbjct 70 CHLMIEDPGRWAPPYAEAGAHNVTFHAEATDDPVAVARDIRAAGAKAGLSVKPNTPIEPY 129
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L+IL HFDTLLVMSVEPGFGGQ FIP VL K R VR++VD+GEL +LVEIDGGIN DTIE
Sbjct 130 LEILKHFDTLLVMSVEPGFGGQSFIPHVLDKARTVRRLVDSGELRLLVEIDGGINADTIE 189
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAA 226
QAAEAG+DCFVAGSAVY DDP A VA LRRQA AA
Sbjct 190 QAAEAGIDCFVAGSAVYNTDDPGATVAKLRRQAAAA 225
>gi|343924570|ref|ZP_08764118.1| ribulose-5-phosphate 3-epimerase [Gordonia alkanivorans NBRC
16433]
gi|343765505|dbj|GAA11044.1| ribulose-5-phosphate 3-epimerase [Gordonia alkanivorans NBRC
16433]
Length=226
Score = 353 bits (907), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 173/223 (78%), Positives = 193/223 (87%), Gaps = 5/223 (2%)
Query 12 LIAPSILAADFARLADEAAAV-----NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTD 66
+IAPSIL+ADFA LADEAAAV ADWLHVDVMD HFVPNLT+GLP+VESLL TD
Sbjct 1 MIAPSILSADFANLADEAAAVAKPGATRADWLHVDVMDNHFVPNLTLGLPIVESLLKATD 60
Query 67 IPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTP 126
IP+DCHLMIDNPDRWAPPYAEAGA+NVTFHAEAT+NP+ VARDIRAAGAKAG+S+KPGT
Sbjct 61 IPLDCHLMIDNPDRWAPPYAEAGAHNVTFHAEATENPIAVARDIRAAGAKAGLSIKPGTA 120
Query 127 LEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIND 186
L+PYL+IL FDTLL+MSVEPGFGGQ+F+PEVL K RA+RK +DA +LT+LVEIDGGIN
Sbjct 121 LKPYLEILRDFDTLLIMSVEPGFGGQKFMPEVLEKARAIRKFIDAEDLTLLVEIDGGINA 180
Query 187 DTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLH 229
DTIE AAEAG+DCFVAGSAVYGA DP AVAALR A A H
Sbjct 181 DTIEGAAEAGIDCFVAGSAVYGAADPGQAVAALRESAATARAH 223
>gi|262202279|ref|YP_003273487.1| ribulose-phosphate 3-epimerase [Gordonia bronchialis DSM 43247]
gi|262085626|gb|ACY21594.1| ribulose-phosphate 3-epimerase [Gordonia bronchialis DSM 43247]
Length=229
Score = 348 bits (892), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/222 (79%), Positives = 198/222 (90%), Gaps = 2/222 (0%)
Query 5 AGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAV 64
AG+T P+IAPSIL+ADFA LA EAAAV G+DWLHVDVMD HFVPNLT+GLPVVESLL
Sbjct 4 AGAT--PMIAPSILSADFANLAAEAAAVEGSDWLHVDVMDAHFVPNLTLGLPVVESLLKA 61
Query 65 TDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPG 124
TDIP+DCHLMI+NP+RWAPPYAEAGA+NVTFHAEATD+P+ VARDIRAAGAKAG+S+KPG
Sbjct 62 TDIPIDCHLMIENPERWAPPYAEAGAHNVTFHAEATDDPIPVARDIRAAGAKAGLSIKPG 121
Query 125 TPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGI 184
TPLEPYL+IL FDTLL+MSVEPGFGGQ+FIP+VL K R +RK++DA +L +LVEIDGGI
Sbjct 122 TPLEPYLEILTSFDTLLIMSVEPGFGGQKFIPDVLEKARTIRKIIDAEDLQLLVEIDGGI 181
Query 185 NDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAA 226
N DTIEQAAEAG+DCFVAGSAVYGA DP AVA LR QA A
Sbjct 182 NADTIEQAAEAGIDCFVAGSAVYGAADPGVAVAKLREQAAQA 223
>gi|326382171|ref|ZP_08203863.1| ribulose-phosphate 3-epimerase [Gordonia neofelifaecis NRRL B-59395]
gi|326198901|gb|EGD56083.1| ribulose-phosphate 3-epimerase [Gordonia neofelifaecis NRRL B-59395]
Length=234
Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 168/219 (77%), Positives = 191/219 (88%), Gaps = 6/219 (2%)
Query 11 PLIAPSILAADFARLADEAAAVN------GADWLHVDVMDGHFVPNLTIGLPVVESLLAV 64
P+IAPSIL+ADFA LA E AAV G DW+HVDVMD HFVPNLT+G+PVVESLL
Sbjct 9 PMIAPSILSADFANLAAEVAAVGPSDVDPGVDWVHVDVMDNHFVPNLTLGMPVVESLLKA 68
Query 65 TDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPG 124
TDIP+DCHLMI++P RWAPPYAEAGAYNVTFHAEATD+P VARDIRAAG KAG+++KPG
Sbjct 69 TDIPLDCHLMIEDPGRWAPPYAEAGAYNVTFHAEATDDPTAVARDIRAAGGKAGLAIKPG 128
Query 125 TPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGI 184
TPLEPYL+IL FDTLLVMSVEPGFGGQ+F+PEVL KVR +RK +D+G+L +LVEIDGGI
Sbjct 129 TPLEPYLEILQDFDTLLVMSVEPGFGGQKFMPEVLDKVRIIRKKIDSGDLRLLVEIDGGI 188
Query 185 NDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQA 223
+D TIE+AAEAGVDCFVAGSAVYG DDPAA VA LRR+A
Sbjct 189 SDSTIEEAAEAGVDCFVAGSAVYGGDDPAARVAELRRKA 227
>gi|134098690|ref|YP_001104351.1| ribulose-phosphate 3-epimerase [Saccharopolyspora erythraea NRRL
2338]
gi|133911313|emb|CAM01426.1| putatibe ribulose-phosphate 3-epimerase [Saccharopolyspora erythraea
NRRL 2338]
Length=233
Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 164/220 (75%), Positives = 190/220 (87%), Gaps = 5/220 (2%)
Query 8 TGGPLIAPSILAADFARLADEAAAVNG-----ADWLHVDVMDGHFVPNLTIGLPVVESLL 62
+ P+IAPSIL+ADFARLADE AAVNG ADWLHVDVMD HFVPNLT+GLPVV+SLL
Sbjct 2 SNQPMIAPSILSADFARLADEMAAVNGEPGHRADWLHVDVMDAHFVPNLTLGLPVVKSLL 61
Query 63 AVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVK 122
TDIP+DCHLMI++PDRWAP YAEAGAYNVT H EA ++PV +A+++RAAGAKAG+S+K
Sbjct 62 KATDIPIDCHLMIEDPDRWAPGYAEAGAYNVTVHVEAAEDPVMLAKNLRAAGAKAGLSIK 121
Query 123 PGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDG 182
P TPLEPY+++L H+DTLLVMSVEPGFGGQ FI +VL+KVR R++VD G L ++VEIDG
Sbjct 122 PNTPLEPYVEVLKHYDTLLVMSVEPGFGGQSFIADVLTKVRKARELVDTGHLNLVVEIDG 181
Query 183 GINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQ 222
GIN DTIEQAAEAGVDCFVAGSAVYGA DPA AV ALR Q
Sbjct 182 GINADTIEQAAEAGVDCFVAGSAVYGAGDPAQAVEALRGQ 221
>gi|291003623|ref|ZP_06561596.1| ribulose-phosphate 3-epimerase [Saccharopolyspora erythraea NRRL
2338]
Length=228
Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 163/216 (76%), Positives = 188/216 (88%), Gaps = 5/216 (2%)
Query 12 LIAPSILAADFARLADEAAAVNG-----ADWLHVDVMDGHFVPNLTIGLPVVESLLAVTD 66
+IAPSIL+ADFARLADE AAVNG ADWLHVDVMD HFVPNLT+GLPVV+SLL TD
Sbjct 1 MIAPSILSADFARLADEMAAVNGEPGHRADWLHVDVMDAHFVPNLTLGLPVVKSLLKATD 60
Query 67 IPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTP 126
IP+DCHLMI++PDRWAP YAEAGAYNVT H EA ++PV +A+++RAAGAKAG+S+KP TP
Sbjct 61 IPIDCHLMIEDPDRWAPGYAEAGAYNVTVHVEAAEDPVMLAKNLRAAGAKAGLSIKPNTP 120
Query 127 LEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIND 186
LEPY+++L H+DTLLVMSVEPGFGGQ FI +VL+KVR R++VD G L ++VEIDGGIN
Sbjct 121 LEPYVEVLKHYDTLLVMSVEPGFGGQSFIADVLTKVRKARELVDTGHLNLVVEIDGGINA 180
Query 187 DTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQ 222
DTIEQAAEAGVDCFVAGSAVYGA DPA AV ALR Q
Sbjct 181 DTIEQAAEAGVDCFVAGSAVYGAGDPAQAVEALRGQ 216
>gi|331697234|ref|YP_004333473.1| ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
gi|326951923|gb|AEA25620.1| ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
Length=223
Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/218 (74%), Positives = 183/218 (84%), Gaps = 5/218 (2%)
Query 17 ILAADFARLADEAAAVNG-----ADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDC 71
+L+ADFARLADEA V G ADWLH+DVMD HFVPNLT+GLPVVESLL T++P+DC
Sbjct 1 MLSADFARLADEADVVTGPVGEGADWLHIDVMDAHFVPNLTLGLPVVESLLRATEVPLDC 60
Query 72 HLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYL 131
HLMID+PDRWAP YAEAGAYNVT HAEA +PV +AR++RAAGA+AG+S+KPGTPLE +L
Sbjct 61 HLMIDDPDRWAPAYAEAGAYNVTVHAEAAHDPVALARNLRAAGARAGLSIKPGTPLEDHL 120
Query 132 DILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQ 191
D L H+DTLL+MSVEPGFGGQ FIPEVL KVR R++VD G LT+LVEIDGGIN DT+EQ
Sbjct 121 DTLKHYDTLLIMSVEPGFGGQAFIPEVLDKVRTARRLVDTGHLTVLVEIDGGINADTVEQ 180
Query 192 AAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLH 229
AAEAGVDCFVAGSAVYGADDP AV ALR Q S H
Sbjct 181 AAEAGVDCFVAGSAVYGADDPLRAVRALREQVVRTSPH 218
>gi|302525887|ref|ZP_07278229.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
gi|302434782|gb|EFL06598.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
Length=227
Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/218 (74%), Positives = 185/218 (85%), Gaps = 5/218 (2%)
Query 11 PLIAPSILAADFARLADEAAAV-----NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVT 65
PLIAPSIL+ADFA+L +E AAV ADW+HVDVMD HFVPNLT+GLPVV+SLL T
Sbjct 4 PLIAPSILSADFAKLGEEIAAVAHPGETRADWVHVDVMDAHFVPNLTLGLPVVQSLLKST 63
Query 66 DIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGT 125
D+P+DCHLMID+PDRWA YAEAGAYNVT H EA +PV +A+++RAAGAKAG+S+KPGT
Sbjct 64 DLPLDCHLMIDDPDRWAIGYAEAGAYNVTVHVEAAKDPVMLAKNLRAAGAKAGLSIKPGT 123
Query 126 PLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIN 185
PLEP+L+ L H+DTLLVMSVEPGFGGQ FI +VL KVR R++VD G L ++VEIDGGIN
Sbjct 124 PLEPHLETLKHYDTLLVMSVEPGFGGQSFIADVLEKVRTARRLVDTGHLKLVVEIDGGIN 183
Query 186 DDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQA 223
DTIEQAAEAGVDCFVAGSAVYGA+DP AVAALR QA
Sbjct 184 SDTIEQAAEAGVDCFVAGSAVYGAEDPGRAVAALREQA 221
>gi|296140263|ref|YP_003647506.1| ribulose-phosphate 3-epimerase [Tsukamurella paurometabola DSM
20162]
gi|296028397|gb|ADG79167.1| ribulose-phosphate 3-epimerase [Tsukamurella paurometabola DSM
20162]
Length=228
Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/218 (75%), Positives = 182/218 (84%), Gaps = 3/218 (1%)
Query 11 PLIAPSILAADFARLADEAAAV---NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDI 67
P+IAPSIL+ADFARL E AV GADW+HVDVMD HFVPNLT+GLPVV+SLL T I
Sbjct 7 PMIAPSILSADFARLGAEIDAVGGPEGADWVHVDVMDNHFVPNLTLGLPVVQSLLTATTI 66
Query 68 PMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPL 127
P+DCHLMID P RWAPPYAEAGA+NVTFHAEATD+PV VA+DIRAAG KAG+++KPGT
Sbjct 67 PLDCHLMIDEPGRWAPPYAEAGAHNVTFHAEATDDPVAVAKDIRAAGGKAGLAIKPGTAF 126
Query 128 EPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDD 187
EPY+++L FDTLLVMSVEPGFGGQ FI +VL K RA RK+VD+ EL +LVEIDGGIN D
Sbjct 127 EPYIEVLKSFDTLLVMSVEPGFGGQSFIADVLDKARAARKLVDSDELKLLVEIDGGINAD 186
Query 188 TIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGA 225
TIEQAA AGVDCFVAGSAVY A DPA AV LR QA A
Sbjct 187 TIEQAAAAGVDCFVAGSAVYNAADPAEAVRKLRAQAAA 224
>gi|324999325|ref|ZP_08120437.1| ribulose-phosphate 3-epimerase [Pseudonocardia sp. P1]
Length=235
Score = 327 bits (839), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 163/229 (72%), Positives = 189/229 (83%), Gaps = 10/229 (4%)
Query 11 PLIAPSILAADFARLADEAAAVN----------GADWLHVDVMDGHFVPNLTIGLPVVES 60
P+IAPSIL+ADFARLADEAAAV GADWLHVDVMD HFVPNLT+GLPVV+S
Sbjct 3 PMIAPSILSADFARLADEAAAVGPSADGTAGDPGADWLHVDVMDAHFVPNLTLGLPVVQS 62
Query 61 LLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGIS 120
L A TDIP+DCHLMI++PDRWAP YAEAGA NVT H EA +PV +ARD+RAAGA AG+S
Sbjct 63 LRAATDIPLDCHLMIEDPDRWAPGYAEAGAKNVTVHVEAARDPVMLARDLRAAGALAGLS 122
Query 121 VKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEI 180
+KPGTPL+PY+++L H+DTLLVMSVEPGFGGQ F+ EVL KVRA R++VD G L ++VEI
Sbjct 123 IKPGTPLDPYVEVLKHYDTLLVMSVEPGFGGQSFMSEVLEKVRAARRLVDTGHLKLIVEI 182
Query 181 DGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLH 229
DGGIN +TIEQAAEAGVDCFVAGSAVY A+DP AVAALR ++ H
Sbjct 183 DGGINAETIEQAAEAGVDCFVAGSAVYNAEDPGRAVAALRDSVRRSNPH 231
>gi|256379227|ref|YP_003102887.1| ribulose-phosphate 3-epimerase [Actinosynnema mirum DSM 43827]
gi|255923530|gb|ACU39041.1| ribulose-phosphate 3-epimerase [Actinosynnema mirum DSM 43827]
Length=216
Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/215 (73%), Positives = 184/215 (86%), Gaps = 0/215 (0%)
Query 12 LIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDC 71
+IAPSIL+ADFARLADEAAAV+GADWLHVDVMD HFVPNLT+GLPVV+SL TDIP+DC
Sbjct 1 MIAPSILSADFARLADEAAAVSGADWLHVDVMDAHFVPNLTLGLPVVKSLRKATDIPLDC 60
Query 72 HLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYL 131
HLMI++PDRWA YAEAGA+NVT HAEA +PV +A+D+RAAG++AG+S+KPGT L+ +
Sbjct 61 HLMIEDPDRWAIGYAEAGAHNVTVHAEAAADPVKLAKDLRAAGSRAGLSIKPGTSLDSVV 120
Query 132 DILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQ 191
D+L H+DTLLVMSVEPGFGGQ F+PEVL KVR R +VD G L +++EIDGGIN DTI Q
Sbjct 121 DVLKHYDTLLVMSVEPGFGGQSFMPEVLDKVRTARNLVDTGHLKLVIEIDGGINADTIAQ 180
Query 192 AAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAA 226
AAEAGVDCFV+GSAVY A DPA A+ +LR A AA
Sbjct 181 AAEAGVDCFVSGSAVYDAADPAKALESLRGLAAAA 215
>gi|300784677|ref|YP_003764968.1| ribulose-phosphate 3-epimerase [Amycolatopsis mediterranei U32]
gi|299794191|gb|ADJ44566.1| ribulose-phosphate 3-epimerase [Amycolatopsis mediterranei U32]
gi|340526100|gb|AEK41305.1| ribulose-phosphate 3-epimerase [Amycolatopsis mediterranei S699]
Length=223
Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 158/217 (73%), Positives = 182/217 (84%), Gaps = 5/217 (2%)
Query 12 LIAPSILAADFARLADEAAAV-----NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTD 66
+IAPSILAADFARL +E AAV ADW+HVDVMD HFVPNLT+GLPV ++L+ TD
Sbjct 1 MIAPSILAADFARLGEEIAAVAAGGETRADWVHVDVMDAHFVPNLTLGLPVAKALIDSTD 60
Query 67 IPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTP 126
+P+DCHLMID+PDRWA YAEAGAYNVT HAEA +PV +A+++RAAGAKAG+S+KPGT
Sbjct 61 LPIDCHLMIDDPDRWAIGYAEAGAYNVTVHAEAAKDPVALAKNLRAAGAKAGLSLKPGTA 120
Query 127 LEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIND 186
LEP+LD L H+DTLLVMSVEPGFGGQ FI +VL KVR R++VD G L ++VEIDGGIN
Sbjct 121 LEPWLDALKHYDTLLVMSVEPGFGGQSFIADVLEKVRTARRLVDTGHLKLIVEIDGGINA 180
Query 187 DTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQA 223
DTIEQAAEAGVDCFVAGSAVYGA DP AVAALR QA
Sbjct 181 DTIEQAAEAGVDCFVAGSAVYGAADPGKAVAALREQA 217
>gi|257055600|ref|YP_003133432.1| ribulose-phosphate 3-epimerase [Saccharomonospora viridis DSM
43017]
gi|256585472|gb|ACU96605.1| ribulose-5-phosphate 3-epimerase [Saccharomonospora viridis DSM
43017]
Length=228
Score = 318 bits (814), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/207 (76%), Positives = 176/207 (86%), Gaps = 5/207 (2%)
Query 11 PLIAPSILAADFARLADEAAAVNG-----ADWLHVDVMDGHFVPNLTIGLPVVESLLAVT 65
PLIAPSIL+ADFA L E AV G ADW+HVDVMDGHFVPNLTIGLPVVESLL T
Sbjct 5 PLIAPSILSADFADLGTEIDAVAGSGDARADWVHVDVMDGHFVPNLTIGLPVVESLLRRT 64
Query 66 DIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGT 125
D+P+DCHLMI++PDRWAP YAEAGAYNVT H EA +PV +A+++RAAGAKAG+++KP T
Sbjct 65 DLPLDCHLMIEDPDRWAPGYAEAGAYNVTVHVEAARDPVMLAKNLRAAGAKAGLAIKPNT 124
Query 126 PLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIN 185
PLE YLD L H+DTLL+MSVEPGFGGQ FIPEVL KVR R++VD G L +LVEIDGGIN
Sbjct 125 PLEDYLDTLKHYDTLLIMSVEPGFGGQAFIPEVLDKVRTARRLVDTGHLKLLVEIDGGIN 184
Query 186 DDTIEQAAEAGVDCFVAGSAVYGADDP 212
DTIEQAAEAGVDCFVAGSAVYGADDP
Sbjct 185 PDTIEQAAEAGVDCFVAGSAVYGADDP 211
>gi|317508960|ref|ZP_07966593.1| ribulose-phosphate 3-epimerase [Segniliparus rugosus ATCC BAA-974]
gi|316252725|gb|EFV12162.1| ribulose-phosphate 3-epimerase [Segniliparus rugosus ATCC BAA-974]
Length=222
Score = 317 bits (813), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/213 (76%), Positives = 184/213 (87%), Gaps = 0/213 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
P+IAPSIL+ADFA LA + AAV GADWLHVDVMD HFVPNLT+G PVV S+ TDIP+D
Sbjct 7 PMIAPSILSADFANLARDVAAVRGADWLHVDVMDNHFVPNLTLGAPVVASIKKATDIPLD 66
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMI++P RWAP YAE GA NVTFHAEA+D+P+ VARDIRAAGA AG+++KPGTPLEPY
Sbjct 67 CHLMIEDPARWAPEYAEIGAKNVTFHAEASDDPLAVARDIRAAGAGAGLAIKPGTPLEPY 126
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
L++L FDT+LVMSVEPGFGGQ+FIPEVL KVR +R + D GELT+L+EIDGGIN DTIE
Sbjct 127 LEVLRGFDTVLVMSVEPGFGGQKFIPEVLDKVRTLRAVKDRGELTVLIEIDGGINMDTIE 186
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQA 223
AAEAGVDCFVAGSAVYGA DPA AV ALR+ A
Sbjct 187 AAAEAGVDCFVAGSAVYGAADPAQAVEALRQAA 219
>gi|284991538|ref|YP_003410092.1| ribulose-phosphate 3-epimerase [Geodermatophilus obscurus DSM
43160]
gi|284064783|gb|ADB75721.1| ribulose-phosphate 3-epimerase [Geodermatophilus obscurus DSM
43160]
Length=224
Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/207 (72%), Positives = 176/207 (86%), Gaps = 1/207 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
PLIAPS+L+ADFARLA+E+ V ADWLH DVMD HFVPNLT GLPV++++ AV+ +P+D
Sbjct 5 PLIAPSLLSADFARLAEESQRVADADWLHFDVMDAHFVPNLTFGLPVMQAVQAVSPVPLD 64
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEA-TDNPVGVARDIRAAGAKAGISVKPGTPLEP 129
CHLMI++P RWAP YAEAGA NVT HAEA TD+P VARD+RAAG+ AG+++KPGTPLE
Sbjct 65 CHLMIEDPARWAPGYAEAGARNVTVHAEACTDDPRAVARDLRAAGSLAGLALKPGTPLEE 124
Query 130 YLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTI 189
YLD+LP FDTLLVM+VEPGFGGQRF+ E L KVR R++VD G LT+LVE+DGGIN DTI
Sbjct 125 YLDVLPEFDTLLVMTVEPGFGGQRFLAETLPKVRRARELVDTGHLTLLVEVDGGINADTI 184
Query 190 EQAAEAGVDCFVAGSAVYGADDPAAAV 216
EQAA AG D FVAGSAVYGADDPA A+
Sbjct 185 EQAAAAGADVFVAGSAVYGADDPARAI 211
>gi|296395035|ref|YP_003659919.1| ribulose-phosphate 3-epimerase [Segniliparus rotundus DSM 44985]
gi|296182182|gb|ADG99088.1| ribulose-phosphate 3-epimerase [Segniliparus rotundus DSM 44985]
Length=216
Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/212 (72%), Positives = 179/212 (85%), Gaps = 0/212 (0%)
Query 12 LIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDC 71
+IAPSIL+ADFA LA + AAV GADWLHVDVMD HFVPNLT+G PVV S+ TDIP+DC
Sbjct 1 MIAPSILSADFANLARDVAAVRGADWLHVDVMDNHFVPNLTLGAPVVASIKKATDIPLDC 60
Query 72 HLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYL 131
HLMI++P RWAP YAE GA NVTFHAEA DNP+ VA+DIRAAGA AG+++KPGT L+PYL
Sbjct 61 HLMIEDPARWAPQYAEIGAKNVTFHAEAADNPLAVAKDIRAAGAGAGLAIKPGTALDPYL 120
Query 132 DILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQ 191
D+L FDT+L+MSVEPGFGGQ+F+P+VL KVR +R + D GELT+L+EIDGGIN TI+
Sbjct 121 DVLSGFDTVLIMSVEPGFGGQKFLPDVLDKVRRLRALKDKGELTVLIEIDGGINRQTIQA 180
Query 192 AAEAGVDCFVAGSAVYGADDPAAAVAALRRQA 223
AAEAGVDCFVAGSAVYGA+DP AV +LR A
Sbjct 181 AAEAGVDCFVAGSAVYGAEDPEKAVESLRELA 212
>gi|258654275|ref|YP_003203431.1| ribulose-phosphate 3-epimerase [Nakamurella multipartita DSM
44233]
gi|258557500|gb|ACV80442.1| ribulose-phosphate 3-epimerase [Nakamurella multipartita DSM
44233]
Length=222
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/201 (71%), Positives = 171/201 (86%), Gaps = 0/201 (0%)
Query 12 LIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDC 71
LIAPSIL ADFA LADE AAV GADWLHVDVMD HFVPNLT+GLPVV+SL VTD+P+DC
Sbjct 4 LIAPSILNADFAHLADEVAAVAGADWLHVDVMDNHFVPNLTLGLPVVQSLAKVTDLPLDC 63
Query 72 HLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYL 131
HLMI++P+RWA YAEAGA+NVT HAEA +P+ +A D+ AAGA+AG+S+KPGTPLE +
Sbjct 64 HLMIEDPNRWAVGYAEAGAHNVTVHAEAVADPIAMAADLHAAGARAGLSLKPGTPLEAWT 123
Query 132 DILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQ 191
D+L H+DTLLVM+VEPGFGGQ F+ +++ KVR R++VD G LT++V++DGGI+ DTIE
Sbjct 124 DVLKHYDTLLVMTVEPGFGGQAFMADMMDKVRTARRLVDTGHLTVVVQVDGGISADTIEI 183
Query 192 AAEAGVDCFVAGSAVYGADDP 212
AAEAG DCFVAGSAVY A DP
Sbjct 184 AAEAGADCFVAGSAVYSAADP 204
>gi|325002921|ref|ZP_08124033.1| ribulose-phosphate 3-epimerase [Pseudonocardia sp. P1]
Length=208
Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/191 (74%), Positives = 160/191 (84%), Gaps = 0/191 (0%)
Query 33 NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYN 92
GADWLHVDVMD HFVPNLT+GLPVV SLLA TD+PMDCHLMI+NPD WA YAEAGA+N
Sbjct 10 RGADWLHVDVMDAHFVPNLTLGLPVVTSLLASTDLPMDCHLMIENPDHWAIGYAEAGAHN 69
Query 93 VTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQ 152
VT H EA ++PV +A+D+RAAGAKAG+++KPGTPLEPY +L H+DTLLVMSVEPGFGGQ
Sbjct 70 VTVHVEAAEDPVMLAKDLRAAGAKAGLAIKPGTPLEPYFGVLRHYDTLLVMSVEPGFGGQ 129
Query 153 RFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQAAEAGVDCFVAGSAVYGADDP 212
FI EVL KVR R +VD G L ++VEIDGGIN +TI AAEAGVDCFVAGSAVY A DP
Sbjct 130 TFIAEVLDKVRTARTLVDTGHLNLMVEIDGGINAETIGAAAEAGVDCFVAGSAVYAATDP 189
Query 213 AAAVAALRRQA 223
A AV ALR +A
Sbjct 190 ALAVEALRSRA 200
>gi|330466986|ref|YP_004404729.1| ribulose-phosphate 3-epimerase [Verrucosispora maris AB-18-032]
gi|328809957|gb|AEB44129.1| ribulose-phosphate 3-epimerase [Verrucosispora maris AB-18-032]
Length=226
Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/217 (71%), Positives = 183/217 (85%), Gaps = 1/217 (0%)
Query 12 LIAPSILAADFARLADEAAAV-NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
++APSILAADFARLA+E AV N ADWLHVDVMD HFVPNLTIGLPVV+SL A T++P D
Sbjct 7 IVAPSILAADFARLAEEVRAVENAADWLHVDVMDNHFVPNLTIGLPVVQSLRAATELPFD 66
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
HLMI++P RWAP YA+AGAYNVTFHAEA D+PV +A+D+RAAGAKAG+++ TP+EPY
Sbjct 67 VHLMIEDPQRWAPGYADAGAYNVTFHAEACDDPVALAKDLRAAGAKAGLAIDRDTPIEPY 126
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
LD+LP+FDTLLVM+++ GFGGQRFIP++L KVRAVR+ DAG L + +E+DGGI DTIE
Sbjct 127 LDLLPNFDTLLVMTIKAGFGGQRFIPQLLDKVRAVRRHRDAGHLELRIEVDGGIAADTIE 186
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAAS 227
QAA AG D FVAG+AVYGADDPA AV LR+ A A+
Sbjct 187 QAAAAGADAFVAGTAVYGADDPAEAVRRLRQLAERAA 223
>gi|345010704|ref|YP_004813058.1| ribulose-phosphate 3-epimerase [Streptomyces violaceusniger Tu
4113]
gi|344037053|gb|AEM82778.1| ribulose-phosphate 3-epimerase [Streptomyces violaceusniger Tu
4113]
Length=224
Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/215 (66%), Positives = 172/215 (80%), Gaps = 0/215 (0%)
Query 13 IAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCH 72
I PSIL+ADF+RLADEA AV GADWLHVDVMD HFVPNLT+G+PVVESL VT+ P+DCH
Sbjct 5 INPSILSADFSRLADEAKAVEGADWLHVDVMDNHFVPNLTLGVPVVESLGKVTETPLDCH 64
Query 73 LMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLD 132
LMID+PDRWAP Y EAGA +VTFH EA PV +AR+IRA GA+A +++KP TP+EPY D
Sbjct 65 LMIDDPDRWAPQYIEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPIEPYED 124
Query 133 ILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQA 192
+LP D LLVM+VEPGFGGQ F+ +L K+R R+++D L + +++DGG++ TIE+
Sbjct 125 LLPELDMLLVMTVEPGFGGQAFLDIMLPKIRRTRQLIDKHGLQMWLQVDGGVSAATIERC 184
Query 193 AEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAAS 227
AEAG D FVAGSAVYGADDPA AV ALRR A A+
Sbjct 185 AEAGADVFVAGSAVYGADDPAKAVQALRRLAEKAT 219
>gi|337769329|emb|CCB78042.1| ribulose-5-phosphate 3-epimerase [Streptomyces cattleya NRRL
8057]
Length=228
Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/216 (65%), Positives = 171/216 (80%), Gaps = 0/216 (0%)
Query 11 PLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
P I PSIL+ADFARLA+EA AV GADWLHVDVMD HFVPNLT+G+PVVESL T P+D
Sbjct 3 PQINPSILSADFARLAEEADAVAGADWLHVDVMDNHFVPNLTLGVPVVESLRKATGTPLD 62
Query 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
CHLMI+ PDRWAP Y EAGA +VTFHAEA PV +AR+IRA GA+A +++KP TP+EPY
Sbjct 63 CHLMIEQPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARAAMALKPATPVEPY 122
Query 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
D+LP D +LVM+VEPGFGGQ F+ +L K+R R+++ L + +++DGG+++ TIE
Sbjct 123 EDLLPELDMILVMTVEPGFGGQSFLDIMLPKIRRTRELIAKHGLDLWLQVDGGVSERTIE 182
Query 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAA 226
+ AEAG D FVAGSAVYGADDPA AV LR QAG+A
Sbjct 183 RCAEAGADVFVAGSAVYGADDPAEAVRKLRNQAGSA 218
>gi|21219966|ref|NP_625745.1| ribulose-phosphate 3-epimerase [Streptomyces coelicolor A3(2)]
gi|289772822|ref|ZP_06532200.1| ribulose-phosphate 3-epimerase [Streptomyces lividans TK24]
gi|18203210|sp|Q9L0Z5.1|RPE_STRCO RecName: Full=Ribulose-phosphate 3-epimerase; AltName: Full=Pentose-5-phosphate
3-epimerase; Short=PPE; AltName: Full=R5P3E
gi|7209224|emb|CAB76886.1| ribulose-phosphate 3-epimerase [Streptomyces coelicolor A3(2)]
gi|289703021|gb|EFD70450.1| ribulose-phosphate 3-epimerase [Streptomyces lividans TK24]
Length=228
Score = 288 bits (736), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/219 (64%), Positives = 171/219 (79%), Gaps = 0/219 (0%)
Query 13 IAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCH 72
I PSIL+ADFARLADEA AV GADWLHVDVMD HFVPNLT+G+PVVESL TD P+DCH
Sbjct 5 INPSILSADFARLADEAKAVEGADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLDCH 64
Query 73 LMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLD 132
LMI+ PDRWAP Y EAGA +VTFHAEA PV +AR+IRA GA+A +++KP TP+EPY D
Sbjct 65 LMIEAPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPVEPYED 124
Query 133 ILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQA 192
+LP D LL+M+VEPGFGGQ F+ +L K+R R+++ L + +++DGG++ TIE+
Sbjct 125 LLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELIKKHGLELWLQVDGGVSAATIERC 184
Query 193 AEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLS 231
A+AG D FVAGSAVYGA DPA AV ALR QA AA+ S
Sbjct 185 ADAGADVFVAGSAVYGASDPAEAVRALRTQADAATAEAS 223
>gi|291440811|ref|ZP_06580201.1| ribulose-phosphate 3-epimerase [Streptomyces ghanaensis ATCC
14672]
gi|291343706|gb|EFE70662.1| ribulose-phosphate 3-epimerase [Streptomyces ghanaensis ATCC
14672]
Length=228
Score = 287 bits (735), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/215 (64%), Positives = 171/215 (80%), Gaps = 0/215 (0%)
Query 13 IAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCH 72
I PSIL+ADFARLADEA AV GADWLHVDVMD HFVPNLT+G+PVVESL TD P+DCH
Sbjct 5 INPSILSADFARLADEAKAVEGADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLDCH 64
Query 73 LMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLD 132
LMI+ PDRWAP Y EAGA +VTFH EA PV +AR+IRA GA+A ++++P TP+EPY D
Sbjct 65 LMIEAPDRWAPQYVEAGAGSVTFHVEAATAPVRLAREIRAKGARASMALRPATPVEPYED 124
Query 133 ILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQA 192
+LP D LL+M+VEPGFGGQ F+ +L K+R R++++ L + +++DGG++ TIE+
Sbjct 125 LLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELINKHGLQLWLQVDGGVSASTIERC 184
Query 193 AEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAAS 227
A+AG D FVAGSAVYGA+DPA AV ALR QA AA+
Sbjct 185 ADAGADVFVAGSAVYGAEDPAEAVRALRHQAEAAT 219
>gi|302866837|ref|YP_003835474.1| ribulose-phosphate 3-epimerase [Micromonospora aurantiaca ATCC
27029]
gi|315503252|ref|YP_004082139.1| ribulose-phosphate 3-epimerase [Micromonospora sp. L5]
gi|302569696|gb|ADL45898.1| ribulose-phosphate 3-epimerase [Micromonospora aurantiaca ATCC
27029]
gi|315409871|gb|ADU07988.1| ribulose-phosphate 3-epimerase [Micromonospora sp. L5]
Length=226
Score = 287 bits (734), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 148/211 (71%), Positives = 177/211 (84%), Gaps = 1/211 (0%)
Query 11 PLIAPSILAADFARLADEAAAVN-GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 69
P++APSILAADFARLADE AV ADWLHVDVMD HFVPNLTIGLPVV+SL AVT IP
Sbjct 6 PIVAPSILAADFARLADEVRAVEPAADWLHVDVMDNHFVPNLTIGLPVVQSLRAVTGIPF 65
Query 70 DCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEP 129
D HLMI +P RWAP YA+AGAYNVTFHAEA D+PV +A+D+R+AGAKAG+++ TP+EP
Sbjct 66 DVHLMITDPRRWAPGYADAGAYNVTFHAEACDDPVALAKDLRSAGAKAGLAIDRDTPIEP 125
Query 130 YLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTI 189
YL++LP FDTLL+M+++ GFGGQRF+P++L KVRA R+ VD+G L + +E+DGGI DTI
Sbjct 126 YLELLPSFDTLLIMTIKAGFGGQRFLPQLLDKVRAARRHVDSGHLELRIEVDGGIAADTI 185
Query 190 EQAAEAGVDCFVAGSAVYGADDPAAAVAALR 220
EQAA AG D FVAG+AVYGADDPA AV LR
Sbjct 186 EQAAAAGADAFVAGTAVYGADDPAEAVRRLR 216
>gi|297198308|ref|ZP_06915705.1| ribulose-phosphate 3-epimerase [Streptomyces sviceus ATCC 29083]
gi|197715561|gb|EDY59595.1| ribulose-phosphate 3-epimerase [Streptomyces sviceus ATCC 29083]
Length=228
Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/219 (64%), Positives = 169/219 (78%), Gaps = 0/219 (0%)
Query 13 IAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCH 72
I PSIL+ADFARLADEA AV GADWLHVDVMD HFVPNLT+G+PVVESL TD P+DCH
Sbjct 5 INPSILSADFARLADEAKAVEGADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLDCH 64
Query 73 LMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLD 132
LMI+ PDRWAP Y EAGA +VTFH EA PV +AR+IRA GA+A +++KP TP+EPY D
Sbjct 65 LMIEAPDRWAPQYVEAGASSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPIEPYED 124
Query 133 ILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQA 192
+LP D LL+M+VEPGFGGQ F+ +L K+R R+++ L + +++DGG++ TIE+
Sbjct 125 LLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSASTIERC 184
Query 193 AEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLS 231
A+AG D FVAGSAVYGA DPA AV ALR QA A+ S
Sbjct 185 ADAGADVFVAGSAVYGASDPAEAVRALRNQAEGATAKAS 223
>gi|326440080|ref|ZP_08214814.1| ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
Length=228
Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/213 (65%), Positives = 170/213 (80%), Gaps = 0/213 (0%)
Query 13 IAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCH 72
I PSIL+ADF+RLADEA AV+GADWLHVDVMD HFVPNLT+G+PVVESL TD P+DCH
Sbjct 5 INPSILSADFSRLADEAKAVDGADWLHVDVMDNHFVPNLTLGVPVVESLGRATDTPLDCH 64
Query 73 LMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLD 132
LMI +PDRWAP Y EAGA +VTFH EA PV +AR+IRA GA+A +++KP TP+EPY D
Sbjct 65 LMIADPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPIEPYED 124
Query 133 ILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIEQA 192
+LP D LL+M+VEPGFGGQ F+ +L K+R R+++ L + +++DGG++D TIE+
Sbjct 125 LLPELDMLLIMTVEPGFGGQSFLDIMLPKIRRTRELIGKHGLELWLQVDGGVSDATIERC 184
Query 193 AEAGVDCFVAGSAVYGADDPAAAVAALRRQAGA 225
AEAG D FVAGSAVYGADDPA AV ALR +A A
Sbjct 185 AEAGADVFVAGSAVYGADDPARAVRALREKAEA 217
Lambda K H
0.319 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 306895531426
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40