BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1409
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608547|ref|NP_215925.1| bifunctional diaminohydroxyphosphor... 672 0.0
gi|31792603|ref|NP_855096.1| bifunctional diaminohydroxyphosphor... 668 0.0
gi|289753491|ref|ZP_06512869.1| riboflavin-specific deaminase [M... 666 0.0
gi|308231834|ref|ZP_07663946.1| riboflavin biosynthesis protein ... 665 0.0
gi|289574078|ref|ZP_06454305.1| riboflavin biosynthesis protein ... 665 0.0
gi|183982231|ref|YP_001850522.1| bifunctional riboflavin biosynt... 584 8e-165
gi|118617420|ref|YP_905752.1| bifunctional riboflavin biosynthes... 580 8e-164
gi|240172784|ref|ZP_04751443.1| bifunctional riboflavin biosynth... 572 3e-161
gi|15827206|ref|NP_301469.1| bifunctional riboflavin-specific de... 540 1e-151
gi|342858686|ref|ZP_08715341.1| riboflavin biosynthesis protein ... 525 3e-147
gi|254822405|ref|ZP_05227406.1| riboflavin biosynthesis protein ... 518 6e-145
gi|118462896|ref|YP_882551.1| riboflavin biosynthesis protein Ri... 510 2e-142
gi|41407234|ref|NP_960070.1| RibG [Mycobacterium avium subsp. pa... 508 5e-142
gi|254775815|ref|ZP_05217331.1| riboflavin biosynthesis protein ... 507 1e-141
gi|296170729|ref|ZP_06852302.1| riboflavin biosynthesis protein ... 498 5e-139
gi|333990929|ref|YP_004523543.1| bifunctional riboflavin biosynt... 498 6e-139
gi|120403674|ref|YP_953503.1| riboflavin biosynthesis protein Ri... 478 6e-133
gi|108799353|ref|YP_639550.1| riboflavin biosynthesis protein Ri... 476 2e-132
gi|118473539|ref|YP_887383.1| riboflavin biosynthesis protein Ri... 474 1e-131
gi|145224309|ref|YP_001134987.1| riboflavin biosynthesis protein... 447 1e-123
gi|169629892|ref|YP_001703541.1| bifunctional riboflavin biosynt... 432 3e-119
gi|307083979|ref|ZP_07493092.1| riboflavin biosynthesis protein ... 409 4e-112
gi|312139593|ref|YP_004006929.1| diaminohydroxyphosphoribosylami... 383 2e-104
gi|226366358|ref|YP_002784141.1| diaminohydroxyphosphoribosylami... 375 4e-102
gi|111024118|ref|YP_707090.1| riboflavin biosynthesis protein Ri... 375 7e-102
gi|257055601|ref|YP_003133433.1| diaminohydroxyphosphoribosylami... 367 1e-99
gi|333919547|ref|YP_004493128.1| diaminohydroxyphosphoribosylami... 358 9e-97
gi|226306507|ref|YP_002766467.1| riboflavin biosynthesis bifunct... 353 2e-95
gi|229493689|ref|ZP_04387474.1| riboflavin biosynthesis protein ... 353 2e-95
gi|317508958|ref|ZP_07966591.1| riboflavin biosynthesis protein ... 339 4e-91
gi|291003622|ref|ZP_06561595.1| diaminohydroxyphosphoribosylamin... 335 4e-90
gi|134098691|ref|YP_001104352.1| diaminohydroxyphosphoribosylami... 335 5e-90
gi|296395033|ref|YP_003659917.1| riboflavin biosynthesis protein... 333 3e-89
gi|331697233|ref|YP_004333472.1| riboflavin biosynthesis protein... 324 1e-86
gi|262202280|ref|YP_003273488.1| riboflavin biosynthesis protein... 317 3e-84
gi|324999324|ref|ZP_08120436.1| diaminohydroxyphosphoribosylamin... 312 4e-83
gi|343924571|ref|ZP_08764119.1| diaminohydroxyphosphoribosylamin... 304 1e-80
gi|284033021|ref|YP_003382952.1| riboflavin biosynthesis protein... 300 2e-79
gi|325676732|ref|ZP_08156406.1| riboflavin biosynthesis protein ... 295 6e-78
gi|326382172|ref|ZP_08203864.1| riboflavin biosynthesis protein ... 293 3e-77
gi|296140262|ref|YP_003647505.1| riboflavin biosynthesis protein... 291 1e-76
gi|302866839|ref|YP_003835476.1| riboflavin biosynthesis protein... 290 3e-76
gi|315503254|ref|YP_004082141.1| riboflavin biosynthesis protein... 290 3e-76
gi|213965573|ref|ZP_03393767.1| riboflavin biosynthesis protein ... 289 6e-76
gi|159037490|ref|YP_001536743.1| riboflavin biosynthesis protein... 286 3e-75
gi|237785569|ref|YP_002906274.1| diaminohydroxyphosphoribosylami... 286 4e-75
gi|145594417|ref|YP_001158714.1| riboflavin biosynthesis protein... 286 5e-75
gi|238063934|ref|ZP_04608643.1| riboflavin biosynthesis protein ... 281 1e-73
gi|326331206|ref|ZP_08197500.1| riboflavin biosynthesis protein ... 280 3e-73
gi|330466988|ref|YP_004404731.1| riboflavin biosynthesis protein... 279 4e-73
>gi|15608547|ref|NP_215925.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium
tuberculosis H37Rv]
gi|15840867|ref|NP_335904.1| riboflavin-specific deaminase [Mycobacterium tuberculosis CDC1551]
gi|148661200|ref|YP_001282723.1| riboflavin-specific deaminase [Mycobacterium tuberculosis H37Ra]
33 more sequence titles
gi|148822629|ref|YP_001287383.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine
deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium tuberculosis
F11]
gi|167968448|ref|ZP_02550725.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine
deaminase + [Mycobacterium
tuberculosis H37Ra]
gi|253799541|ref|YP_003032542.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
KZN 1435]
gi|254231651|ref|ZP_04924978.1| bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine
deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium tuberculosis
C]
gi|254364292|ref|ZP_04980338.1| bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine
deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium tuberculosis
str. Haarlem]
gi|254550423|ref|ZP_05140870.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289554800|ref|ZP_06444010.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
KZN 605]
gi|289745160|ref|ZP_06504538.1| riboflavin-specific deaminase [Mycobacterium tuberculosis 02_1987]
gi|289757515|ref|ZP_06516893.1| riboflavin-specific deaminase [Mycobacterium tuberculosis T85]
gi|289761568|ref|ZP_06520946.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium
tuberculosis GM 1503]
gi|294994971|ref|ZP_06800662.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
210]
gi|297633965|ref|ZP_06951745.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
KZN 4207]
gi|297730954|ref|ZP_06960072.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
KZN R506]
gi|298524915|ref|ZP_07012324.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium tuberculosis
94_M4241A]
gi|313658287|ref|ZP_07815167.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
KZN V2475]
gi|2829534|sp|P71677.1|RIBD_MYCTU RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase;
Short=DRAP deaminase; AltName: Full=Riboflavin-specific
deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil
reductase; AltName: Full=HTP reductase
gi|1542917|emb|CAB02188.1| PROBABLE BIFUNCTIONAL riboflavin biosynthesis protein RIBG :
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific
deaminase) + 5-amino-6-(5-phosphoribosylamino)
uracil reductase (HTP reductase) [Mycobacterium tuberculosis
H37Rv]
gi|13881067|gb|AAK45718.1| riboflavin-specific deaminase [Mycobacterium tuberculosis CDC1551]
gi|124600710|gb|EAY59720.1| bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine
deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium tuberculosis
C]
gi|134149806|gb|EBA41851.1| bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine
deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium tuberculosis
str. Haarlem]
gi|148505352|gb|ABQ73161.1| riboflavin-specific deaminase [Mycobacterium tuberculosis H37Ra]
gi|148721156|gb|ABR05781.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine
deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium tuberculosis
F11]
gi|253321044|gb|ACT25647.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
KZN 1435]
gi|289439432|gb|EFD21925.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
KZN 605]
gi|289685688|gb|EFD53176.1| riboflavin-specific deaminase [Mycobacterium tuberculosis 02_1987]
gi|289709074|gb|EFD73090.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium
tuberculosis GM 1503]
gi|289713079|gb|EFD77091.1| riboflavin-specific deaminase [Mycobacterium tuberculosis T85]
gi|298494709|gb|EFI30003.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium tuberculosis
94_M4241A]
gi|323720073|gb|EGB29179.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
CDC1551A]
gi|326903030|gb|EGE49963.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
W-148]
gi|328459289|gb|AEB04712.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
KZN 4207]
gi|339294387|gb|AEJ46498.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium
tuberculosis CCDC5079]
gi|344219239|gb|AEM99869.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium
tuberculosis CTRI-2]
Length=339
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/339 (100%), Positives = 339/339 (100%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV
Sbjct 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR
Sbjct 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS
Sbjct 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR
Sbjct 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG
Sbjct 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR
Sbjct 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
>gi|31792603|ref|NP_855096.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium
bovis AF2122/97]
gi|121637339|ref|YP_977562.1| putative bifunctional riboflavin biosynthesis protein RIBG: diaminohydroxyphosphoribosylaminopyrimidine
deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224989814|ref|YP_002644501.1| putative riboflavin biosynthesis protein [Mycobacterium bovis
BCG str. Tokyo 172]
12 more sequence titles
gi|289442854|ref|ZP_06432598.1| riboflavin biosynthesis protein RibD [Mycobacterium tuberculosis
T46]
gi|289447005|ref|ZP_06436749.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
CPHL_A]
gi|289749967|ref|ZP_06509345.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
T92]
gi|340626423|ref|YP_004744875.1| putative bifunctional riboflavin biosynthesis protein RIBG :
diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific
deaminase)/5-amino-6-(5-phosphoribosylamino)
uracil reductase (HTP reductase) [Mycobacterium canettii CIPT
140010059]
gi|31618192|emb|CAD94305.1| PROBABLE BIFUNCTIONAL riboflavin biosynthesis protein RIBG :
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific
deaminase) + 5-amino-6-(5-phosphoribosylamino)
uracil reductase (HTP reductase) [Mycobacterium bovis AF2122/97]
gi|121492986|emb|CAL71457.1| Probable bifunctional riboflavin biosynthesis protein RIBG :
Diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224772927|dbj|BAH25733.1| putative riboflavin biosynthesis protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|289415773|gb|EFD13013.1| riboflavin biosynthesis protein RibD [Mycobacterium tuberculosis
T46]
gi|289419963|gb|EFD17164.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
CPHL_A]
gi|289690554|gb|EFD57983.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
T92]
gi|340004613|emb|CCC43757.1| putative bifunctional riboflavin biosynthesis protein RIBG :
diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific
deaminase) + 5-amino-6-(5-phosphoribosylamino)
uracil reductase (HTP reductase) [Mycobacterium canettii CIPT
140010059]
gi|341601358|emb|CCC64031.1| probable bifunctional riboflavin biosynthesis protein RIBG :
Diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)
uracil reductase [Mycobacterium
bovis BCG str. Moreau RDJ]
Length=339
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/339 (99%), Positives = 337/339 (99%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
MNVEQVKSIDEAMGLAIEHSYQVKGTTYP PPVGAVIVDPNGRIVGAGGTEPAGGDHAEV
Sbjct 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
VALRRAGGLA GAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR
Sbjct 61 VALRRAGGLATGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS
Sbjct 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR
Sbjct 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG
Sbjct 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR
Sbjct 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
>gi|289753491|ref|ZP_06512869.1| riboflavin-specific deaminase [Mycobacterium tuberculosis EAS054]
gi|289694078|gb|EFD61507.1| riboflavin-specific deaminase [Mycobacterium tuberculosis EAS054]
Length=339
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/339 (99%), Positives = 337/339 (99%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
MNVEQVKSIDEAMGLAIEHSYQVKGTTYP PPVGAVIVDPNGRIVGAGGTEPAGGDHAEV
Sbjct 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
VALRRAGGLA GAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR
Sbjct 61 VALRRAGGLATGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLP+VTWKYATSIDGRSAAADGSSQWISS
Sbjct 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPYVTWKYATSIDGRSAAADGSSQWISS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR
Sbjct 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG
Sbjct 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR
Sbjct 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
>gi|308231834|ref|ZP_07663946.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
SUMu001]
gi|308369792|ref|ZP_07419077.2| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
SUMu002]
gi|308370712|ref|ZP_07666996.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
SUMu003]
20 more sequence titles
Length=337
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/337 (99%), Positives = 337/337 (100%), Gaps = 0/337 (0%)
Query 3 VEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVA 62
+EQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVA
Sbjct 1 MEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVA 60
Query 63 LRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLS 122
LRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLS
Sbjct 61 LRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLS 120
Query 123 AAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEA 182
AAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEA
Sbjct 121 AAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEA 180
Query 183 ARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVL 242
ARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVL
Sbjct 181 ARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVL 240
Query 243 NDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGP 302
NDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGP
Sbjct 241 NDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGP 300
Query 303 VTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR
Sbjct 301 VTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 337
>gi|289574078|ref|ZP_06454305.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
K85]
gi|339631476|ref|YP_004723118.1| riboflavin biosynthesis protein RibG [Mycobacterium africanum
GM041182]
gi|289538509|gb|EFD43087.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
K85]
gi|339330832|emb|CCC26503.1| putative bifunctional riboflavin biosynthesis protein RIBG: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (riboflavin-specific
deaminase) + 5-amino-6-(5-phosphoribosylamino)
uracil reductase (HTP reductase) [Mycobacterium africanum GM041182]
Length=339
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/339 (99%), Positives = 336/339 (99%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
MNVEQVKSIDEAMGLAIEHSYQVKGTTYP PPVGAVIVDPNGRIVGAGGTEPAGGDHAEV
Sbjct 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
VALRRAGGLA GAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR
Sbjct 61 VALRRAGGLATGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS
Sbjct 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDI PEAR
Sbjct 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDILPEAR 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG
Sbjct 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR
Sbjct 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
>gi|183982231|ref|YP_001850522.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
marinum M]
gi|183175557|gb|ACC40667.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
marinum M]
Length=339
Score = 584 bits (1505), Expect = 8e-165, Method: Compositional matrix adjust.
Identities = 299/339 (89%), Positives = 320/339 (95%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
M VEQVKS++EAM LAIE S VKGTTYP PPVGAVIVD GR+VG GGT+P+GGDHAEV
Sbjct 1 MTVEQVKSLEEAMRLAIEQSMLVKGTTYPNPPVGAVIVDQEGRVVGIGGTQPSGGDHAEV 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
VALR+AGGLAAGAI VVTMEPCNH+GKTPPCVNALIEARVGTV+Y VADPNGIAGGGAGR
Sbjct 61 VALRKAGGLAAGAIAVVTMEPCNHFGKTPPCVNALIEARVGTVIYGVADPNGIAGGGAGR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
LSAAGLQVRSGVLA+ VAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS
Sbjct 121 LSAAGLQVRSGVLADHVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EAAR DLHRRRAI+DAI+VGTGTVL DDP LTARL+DGSLA +QPLRVVVGKRDIPPEA+
Sbjct 181 EAARADLHRRRAISDAIVVGTGTVLVDDPTLTARLSDGSLAAEQPLRVVVGKRDIPPEAK 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLND+ARTMMI+THEP+EVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG
Sbjct 241 VLNDDARTMMIKTHEPVEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGVS+I +ALRWQFD VE+ GPDLLLSLV+R
Sbjct 301 GPVTAVDDVGVSSIAHALRWQFDGVERCGPDLLLSLVSR 339
>gi|118617420|ref|YP_905752.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
ulcerans Agy99]
gi|118569530|gb|ABL04281.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
ulcerans Agy99]
Length=339
Score = 580 bits (1496), Expect = 8e-164, Method: Compositional matrix adjust.
Identities = 298/339 (88%), Positives = 319/339 (95%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
M VEQVKS++EAM LAIE S VKGTTYP PPVGAVIVD G +VG GGT+P+GGDHAEV
Sbjct 1 MTVEQVKSLEEAMRLAIEQSMLVKGTTYPNPPVGAVIVDQEGWVVGIGGTQPSGGDHAEV 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
VALR+AGGLAAGAI VVTMEPCNH+GKTPPCVNALIEARVGTV+Y VADPNGIAGGGAGR
Sbjct 61 VALRKAGGLAAGAIAVVTMEPCNHFGKTPPCVNALIEARVGTVIYGVADPNGIAGGGAGR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
LSAAGLQVRSGVLA+ VAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS
Sbjct 121 LSAAGLQVRSGVLADHVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EAAR DLHRRRAI+DAI+VGTGTVL DDP LTARL+DGSLA +QPLRVVVGKRDIPPEA+
Sbjct 181 EAARADLHRRRAISDAIVVGTGTVLVDDPTLTARLSDGSLAAEQPLRVVVGKRDIPPEAK 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLND+ARTMMI+THEP+EVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG
Sbjct 241 VLNDDARTMMIKTHEPVEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGVS+I +ALRWQFD VE+ GPDLLLSLV+R
Sbjct 301 GPVTAVDDVGVSSIAHALRWQFDGVERCGPDLLLSLVSR 339
>gi|240172784|ref|ZP_04751443.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
kansasii ATCC 12478]
Length=339
Score = 572 bits (1474), Expect = 3e-161, Method: Compositional matrix adjust.
Identities = 297/339 (88%), Positives = 319/339 (95%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
M VEQVKSI++AM LAI+ SY VKG+TYP PPVGAVIVD GR+VG GGT+P GGDHAEV
Sbjct 1 MTVEQVKSIEDAMRLAIDQSYLVKGSTYPNPPVGAVIVDTEGRVVGVGGTQPTGGDHAEV 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
VALRRAGGLAAGAI VVTMEPCNHYGKTPPCVNALIEARVGTV+Y VADPNGIAGGGAGR
Sbjct 61 VALRRAGGLAAGAIAVVTMEPCNHYGKTPPCVNALIEARVGTVIYGVADPNGIAGGGAGR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
LSAAG+QVRSGVLA+ VAAGPLREWLHKQRTGLPHVTWKYATS+DGRSAAADGSSQWISS
Sbjct 121 LSAAGVQVRSGVLADHVAAGPLREWLHKQRTGLPHVTWKYATSVDGRSAAADGSSQWISS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EAAR DLHRRRAIADAI+VGTGTVLADDPALTARL DGSLAP+QPLRVVVG RDIPPEA+
Sbjct 181 EAARADLHRRRAIADAIVVGTGTVLADDPALTARLPDGSLAPKQPLRVVVGTRDIPPEAK 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLND+ARTM++RTHEP+EVLRAL D TDVLLEGGPT+AGAFLR GAI+RILAYVAPILLG
Sbjct 241 VLNDDARTMVLRTHEPVEVLRALLDYTDVLLEGGPTVAGAFLRCGAISRILAYVAPILLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGVS+I +ALRWQFDSVEKVGPDLLLSL+ R
Sbjct 301 GPVTAVDDVGVSSIAHALRWQFDSVEKVGPDLLLSLIPR 339
>gi|15827206|ref|NP_301469.1| bifunctional riboflavin-specific deaminase/reductase [Mycobacterium
leprae TN]
gi|221229684|ref|YP_002503100.1| putative bifunctional riboflavin-specific deaminase/reductase
[Mycobacterium leprae Br4923]
gi|13092754|emb|CAC30063.1| putative bifunctional riboflavin-specific deaminase/reductase
[Mycobacterium leprae]
gi|219932791|emb|CAR70648.1| putative bifunctional riboflavin-specific deaminase/reductase
[Mycobacterium leprae Br4923]
Length=339
Score = 540 bits (1391), Expect = 1e-151, Method: Compositional matrix adjust.
Identities = 266/339 (79%), Positives = 300/339 (89%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
MNV+ V S+D AM LA+E SY VKG TYP PPVGAVIVDP+GR+VG G TEPAGGDHAEV
Sbjct 1 MNVQTVDSLDAAMRLAVEQSYLVKGATYPNPPVGAVIVDPDGRVVGVGATEPAGGDHAEV 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
VALR AG AAGAI VVT+EPCNHYGKTPPCVNAL+EA+V V YA+ADPN AGGGA R
Sbjct 61 VALRSAGVTAAGAIAVVTLEPCNHYGKTPPCVNALLEAKVDKVAYAIADPNASAGGGAAR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
L+AAG+ V+SGVLA+ V AGPLREWLHKQRTGLPHVTWKYA+SIDGRSAAADGSS+W+SS
Sbjct 121 LTAAGVHVQSGVLADLVTAGPLREWLHKQRTGLPHVTWKYASSIDGRSAAADGSSRWLSS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EA+R DLHRRRA ADAI+VGTGTVLAD+P LTARLA+G+LA +QPLRVVVG R+IP EA
Sbjct 181 EASRADLHRRRATADAIVVGTGTVLADNPTLTARLANGALADRQPLRVVVGMREIPLEAN 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLND++ TM+IRTH+PMEVL+AL+DRTDVLLEGGPTLAGAFLRAG INRILAYVAPILLG
Sbjct 241 VLNDDSPTMVIRTHDPMEVLKALADRTDVLLEGGPTLAGAFLRAGTINRILAYVAPILLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGV NI ALRWQFD +++ G DL++SLV R
Sbjct 301 GPVTAVDDVGVPNIARALRWQFDGIDRAGSDLVISLVTR 339
>gi|342858686|ref|ZP_08715341.1| riboflavin biosynthesis protein RibD [Mycobacterium colombiense
CECT 3035]
gi|342134390|gb|EGT87570.1| riboflavin biosynthesis protein RibD [Mycobacterium colombiense
CECT 3035]
Length=341
Score = 525 bits (1353), Expect = 3e-147, Method: Compositional matrix adjust.
Identities = 260/339 (77%), Positives = 294/339 (87%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
M V S+D AM LAI+ S VKGTTYP PPVGAVI+D G +VG G TEP GGDHAE+
Sbjct 1 MTVPPGDSLDAAMRLAIDQSNHVKGTTYPNPPVGAVILDAGGEVVGVGATEPVGGDHAEI 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
+ALRRAG LAAG VVT+EPCNHYG+TPPCVNAL++A+V TVVYAVADPN A GGA R
Sbjct 61 LALRRAGELAAGGTAVVTLEPCNHYGRTPPCVNALLDAKVATVVYAVADPNPEAAGGAAR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
L AG+ V GVLA++V+ GPLREWLHKQRTGLPH+TWKYA+S+DGRSAAADGSSQWISS
Sbjct 121 LEEAGVAVECGVLADEVSGGPLREWLHKQRTGLPHLTWKYASSVDGRSAAADGSSQWISS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EA+RLDLHRRRA A AI+VGTGTVLADDPALTARL DGSLA +QPLRVV+G R+IP EA+
Sbjct 181 EASRLDLHRRRAAAGAIVVGTGTVLADDPALTARLPDGSLADRQPLRVVIGMREIPSEAK 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLND++RTM+IRTH+P+EVL+A+SDRTDVLLEGGPTLAGAFLRAG +NRILAYVAP LLG
Sbjct 241 VLNDDSRTMLIRTHDPLEVLKAVSDRTDVLLEGGPTLAGAFLRAGVVNRILAYVAPTLLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGV IT ALRWQFD V++VGPDLLLSLV R
Sbjct 301 GPVTAVDDVGVPTITRALRWQFDGVDRVGPDLLLSLVPR 339
>gi|254822405|ref|ZP_05227406.1| riboflavin biosynthesis protein RibD [Mycobacterium intracellulare
ATCC 13950]
Length=341
Score = 518 bits (1334), Expect = 6e-145, Method: Compositional matrix adjust.
Identities = 264/339 (78%), Positives = 296/339 (88%), Gaps = 0/339 (0%)
Query 1 MNVEQVKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV 60
M V +D AM LAIE S VKGTTYP PPVGAVI+D G +VG GGTEPAGGDHAE+
Sbjct 1 MTVSPGDGLDAAMRLAIEQSTLVKGTTYPNPPVGAVILDAGGEVVGVGGTEPAGGDHAEI 60
Query 61 VALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR 120
+ALRRAG LAAG VVVT+EPCNHYGKTPPCVNAL++A V TVVYAVADPN A GGA R
Sbjct 61 LALRRAGDLAAGGTVVVTLEPCNHYGKTPPCVNALLDANVATVVYAVADPNPQAAGGAAR 120
Query 121 LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS 180
L AG+ VRSGVLA++VA GPLREWLHKQRTGLPH+TWKYA+S+DGRSAAADGSSQWISS
Sbjct 121 LEEAGVAVRSGVLADEVARGPLREWLHKQRTGLPHLTWKYASSVDGRSAAADGSSQWISS 180
Query 181 EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR 240
EA+RLDLHRRR DAI+VGTGTVLADDPALTARL DGSLA +QPLRVVVG R+IP EA+
Sbjct 181 EASRLDLHRRRGACDAIVVGTGTVLADDPALTARLPDGSLAARQPLRVVVGMREIPSEAK 240
Query 241 VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG 300
VLND++RTM+IRTH+P EVL+A+SDRTDVLLEGGPTLAGAFLRAGA++RILAYVAP LLG
Sbjct 241 VLNDDSRTMLIRTHDPAEVLKAVSDRTDVLLEGGPTLAGAFLRAGAVDRILAYVAPTLLG 300
Query 301 GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GPVTAVDDVGVS I ALRWQFD +++VGPD++LSLV R
Sbjct 301 GPVTAVDDVGVSTIARALRWQFDGIDRVGPDVVLSLVPR 339
>gi|118462896|ref|YP_882551.1| riboflavin biosynthesis protein RibD [Mycobacterium avium 104]
gi|118164183|gb|ABK65080.1| riboflavin biosynthesis protein RibD [Mycobacterium avium 104]
Length=341
Score = 510 bits (1313), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 258/331 (78%), Positives = 294/331 (89%), Gaps = 0/331 (0%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
+D AM LAIE S QVKG TYP PPVGAV++D G +VG GGTEPAGGDHAE++ALRRAG
Sbjct 9 LDAAMRLAIEQSNQVKGNTYPNPPVGAVVLDGRGEVVGVGGTEPAGGDHAEILALRRAGD 68
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
LAAG VVVT+EPCNH+GKTPPCV+AL+EA V TVVYAVADPN A GGAGRL AG+ V
Sbjct 69 LAAGGTVVVTLEPCNHHGKTPPCVDALLEAGVSTVVYAVADPNPQAAGGAGRLQEAGVTV 128
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
RSG+LA++V+ GPLREWLHKQRTGLPH+TWKYA+S+DGRSAAADGSS+WISSEA+RLDLH
Sbjct 129 RSGLLADEVSGGPLREWLHKQRTGLPHLTWKYASSVDGRSAAADGSSRWISSEASRLDLH 188
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
RRRA ADAI+VGTGTVLADDPALTARL DG+LA +QPLRVVVG R+IP EA+VLND++RT
Sbjct 189 RRRAAADAIVVGTGTVLADDPALTARLPDGTLADRQPLRVVVGMREIPSEAKVLNDDSRT 248
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
M+IRTH+P EVL+A+SDRTDVLLEGGPTLAGAF+RAG +NRIL Y+AP LLGGPVTAVDD
Sbjct 249 MVIRTHDPAEVLKAVSDRTDVLLEGGPTLAGAFVRAGLVNRILVYLAPTLLGGPVTAVDD 308
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VGV I ALRWQFD V++VGPDLLLSLV R
Sbjct 309 VGVPTIAKALRWQFDGVDRVGPDLLLSLVPR 339
>gi|41407234|ref|NP_960070.1| RibG [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41395585|gb|AAS03453.1| RibG [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461619|gb|EGO40484.1| riboflavin biosynthesis protein RibD [Mycobacterium avium subsp.
paratuberculosis S397]
Length=341
Score = 508 bits (1308), Expect = 5e-142, Method: Compositional matrix adjust.
Identities = 258/331 (78%), Positives = 294/331 (89%), Gaps = 0/331 (0%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
+D AM LAIE S QVKG TYP PPVGAV++D G +VG GGTEPAGGDHAE++ALRRAG
Sbjct 9 LDAAMHLAIEQSNQVKGNTYPNPPVGAVVLDGRGEVVGVGGTEPAGGDHAEILALRRAGD 68
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
LAAG VVVT+EPCNH+GKTPPCV+AL+EA VGTVVYAVADPN A GGAGRL AG+ V
Sbjct 69 LAAGGTVVVTLEPCNHHGKTPPCVDALLEAGVGTVVYAVADPNPQAAGGAGRLQEAGVTV 128
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
RSG+LA++V+ GPLREWLHKQRTGLPH+TWKYA+S+DGRSAAADGSS+WISSEA+RLDLH
Sbjct 129 RSGLLADEVSGGPLREWLHKQRTGLPHLTWKYASSVDGRSAAADGSSRWISSEASRLDLH 188
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
RRRA ADAI+VGTGTVLADDPALTARL DG+LA +QPLRVVVG R+I EA+VLN+E+RT
Sbjct 189 RRRAAADAIVVGTGTVLADDPALTARLPDGTLADRQPLRVVVGMREILSEAKVLNEESRT 248
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
M+IRTH+P EVL+A+SDRTDVLLEGGPTLAGAF+RAG +NRIL Y+AP LLGGPVTAVDD
Sbjct 249 MVIRTHDPAEVLKAVSDRTDVLLEGGPTLAGAFVRAGLVNRILVYLAPTLLGGPVTAVDD 308
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VGV I ALRWQFD V++VGPDLLLSLV R
Sbjct 309 VGVPTIAKALRWQFDGVDRVGPDLLLSLVPR 339
>gi|254775815|ref|ZP_05217331.1| riboflavin biosynthesis protein RibD [Mycobacterium avium subsp.
avium ATCC 25291]
Length=341
Score = 507 bits (1305), Expect = 1e-141, Method: Compositional matrix adjust.
Identities = 256/331 (78%), Positives = 293/331 (89%), Gaps = 0/331 (0%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
+D AM LAIE S QVKG TYP PPVGAV++D G +VG GGTEPAGGDHAE++ALRRAG
Sbjct 9 LDAAMRLAIEQSNQVKGNTYPNPPVGAVVLDGRGEVVGVGGTEPAGGDHAEILALRRAGD 68
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
LAAG VVVT+EPCNH+GKTPPCV+AL+EA V TVVYA+ADPN A GGAGRL AG+ V
Sbjct 69 LAAGGTVVVTLEPCNHHGKTPPCVDALLEAGVSTVVYAIADPNPQAAGGAGRLQEAGVTV 128
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
RSG+LA++V+ GPLREWLHKQRTGLPH+TWKYA+S+DGRSAAADGSS+WISSE +RLDLH
Sbjct 129 RSGLLADEVSGGPLREWLHKQRTGLPHLTWKYASSVDGRSAAADGSSRWISSEVSRLDLH 188
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
RRRA ADAI+VGTGTVLADDPALTARL DG+LA +QPLRVVVG R+IP EA+VLND++RT
Sbjct 189 RRRAAADAIVVGTGTVLADDPALTARLPDGTLADRQPLRVVVGMREIPSEAKVLNDDSRT 248
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
M+IRTH+P EVL+A+SDRTDVLLEGGPTLAGAF+RAG +NRIL Y+AP LLGGPVTAVDD
Sbjct 249 MVIRTHDPAEVLKAVSDRTDVLLEGGPTLAGAFVRAGLVNRILVYLAPTLLGGPVTAVDD 308
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VGV I ALRWQFD V++VGPDLLLSLV R
Sbjct 309 VGVPAIAKALRWQFDGVDRVGPDLLLSLVPR 339
>gi|296170729|ref|ZP_06852302.1| riboflavin biosynthesis protein RibD [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894612|gb|EFG74348.1| riboflavin biosynthesis protein RibD [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=340
Score = 498 bits (1282), Expect = 5e-139, Method: Compositional matrix adjust.
Identities = 261/331 (79%), Positives = 294/331 (89%), Gaps = 0/331 (0%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
+D AM LAIE S QVKGTTYP PPVGAV++D G +VG GGTEPAGGDHAEV+ALRRAG
Sbjct 8 LDAAMRLAIEQSKQVKGTTYPNPPVGAVVLDAGGVVVGVGGTEPAGGDHAEVLALRRAGD 67
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
LAAG VVT+EPCNH+G+TPPCVNAL+EA+V TVVYAVADPN A GGA RL+ AG+QV
Sbjct 68 LAAGGTAVVTLEPCNHHGRTPPCVNALLEAKVATVVYAVADPNPAAAGGAARLAEAGVQV 127
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
GVLA++VA GPLREWLHKQRTG PHVTWKYA+S+DGRSAAADG+SQWISSEA+RLDLH
Sbjct 128 TGGVLADEVAGGPLREWLHKQRTGSPHVTWKYASSVDGRSAAADGTSQWISSEASRLDLH 187
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
RRRA ADAI+VGTGTVLADDP LTARL DGSLA +QPLRVVVG R+IP EA+VLND++RT
Sbjct 188 RRRATADAIVVGTGTVLADDPTLTARLPDGSLAARQPLRVVVGMREIPSEAKVLNDDSRT 247
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
M+IRTH+PMEV++ALSDRTDVLLEGGPTLAGAFLRAG +NRIL YVAP+LLGGPV+AVDD
Sbjct 248 MVIRTHDPMEVIKALSDRTDVLLEGGPTLAGAFLRAGVVNRILVYVAPMLLGGPVSAVDD 307
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VGV I ALRWQFD V++VGPDLLLSLV R
Sbjct 308 VGVPTIARALRWQFDGVDRVGPDLLLSLVPR 338
>gi|333990929|ref|YP_004523543.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
sp. JDM601]
gi|333486897|gb|AEF36289.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
sp. JDM601]
Length=343
Score = 498 bits (1282), Expect = 6e-139, Method: Compositional matrix adjust.
Identities = 251/329 (77%), Positives = 283/329 (87%), Gaps = 0/329 (0%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
D AM LAI+ S QVKG TYP PPVGAV++D +G++VG GGT P G HAEVVALRRAG
Sbjct 13 FDAAMLLAIDQSQQVKGNTYPNPPVGAVVLDRDGQVVGVGGTRPTGEAHAEVVALRRAGE 72
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
LAAG VVVT+ PCNH+G+TPPCV A++ A V VVYAV DPN A GG RL+AAG++V
Sbjct 73 LAAGGTVVVTLAPCNHHGRTPPCVEAVLAAGVARVVYAVEDPNPEAAGGPARLAAAGIEV 132
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
SGV A V GPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWI+SEAAR DLH
Sbjct 133 LSGVQAAAVTVGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWITSEAARADLH 192
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
RRRA ADAI+VGTGTVL DDP LTARL DG+LA +QPLRVVVG+R+I +A+VLND++RT
Sbjct 193 RRRAAADAIVVGTGTVLVDDPTLTARLPDGTLAERQPLRVVVGEREISADAQVLNDDSRT 252
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
M+IRTH+P EVLRALSDRTDVLLEGGPTLAGAFLRAGAI+RILAYVAPILLGGP+TAVDD
Sbjct 253 MVIRTHDPAEVLRALSDRTDVLLEGGPTLAGAFLRAGAIDRILAYVAPILLGGPITAVDD 312
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLV 337
VGVS+I ALRW+FD+VE +GPDLLLSLV
Sbjct 313 VGVSSIARALRWRFDTVEPIGPDLLLSLV 341
>gi|120403674|ref|YP_953503.1| riboflavin biosynthesis protein RibD [Mycobacterium vanbaalenii
PYR-1]
gi|119956492|gb|ABM13497.1| riboflavin biosynthesis protein RibD [Mycobacterium vanbaalenii
PYR-1]
Length=333
Score = 478 bits (1230), Expect = 6e-133, Method: Compositional matrix adjust.
Identities = 234/329 (72%), Positives = 274/329 (84%), Gaps = 0/329 (0%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
+D AM AIE S +VKG TYP PPVGAVI+D +G I G G T P GG HAEVVALRRAG
Sbjct 2 KLDAAMAAAIEQSERVKGRTYPNPPVGAVILDRDGEIAGVGATAPPGGPHAEVVALRRAG 61
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPCNH+G+TPPCV+AL++A + V +AVADP+ +A GGA RL+ +G++
Sbjct 62 ERAVGGTAVVTLEPCNHFGRTPPCVDALLDAGIAEVAFAVADPDPVAAGGAARLAESGVR 121
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V +GVLA V GPLREWLHKQRTG+PHVTWK+ATS+DGRSAAADGSSQWI+SEAAR D+
Sbjct 122 VSAGVLAADVTGGPLREWLHKQRTGMPHVTWKFATSVDGRSAAADGSSQWITSEAARADV 181
Query 188 HRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEAR 247
HRRRA ADAI+VGTGTV DDPALTARL DGSLA QPLRVVVGKR+I P+A VLND++R
Sbjct 182 HRRRATADAIIVGTGTVFVDDPALTARLPDGSLADHQPLRVVVGKREISPDATVLNDDSR 241
Query 248 TMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVD 307
TM+IRTH P EV++AL+DRTDV +EGGPTLAGAFLRAG I+RILAYVAPILLGGP+TAVD
Sbjct 242 TMVIRTHNPHEVIKALADRTDVFVEGGPTLAGAFLRAGVIDRILAYVAPILLGGPITAVD 301
Query 308 DVGVSNITNALRWQFDSVEKVGPDLLLSL 336
DVGV +I A RW+FD + VGPD+LLSL
Sbjct 302 DVGVLSIAQAQRWRFDGMTAVGPDVLLSL 330
>gi|108799353|ref|YP_639550.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. MCS]
gi|119868469|ref|YP_938421.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. KMS]
gi|126435011|ref|YP_001070702.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. JLS]
gi|108769772|gb|ABG08494.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. MCS]
gi|119694558|gb|ABL91631.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. KMS]
gi|126234811|gb|ABN98211.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. JLS]
Length=333
Score = 476 bits (1226), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 236/328 (72%), Positives = 278/328 (85%), Gaps = 0/328 (0%)
Query 10 DEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGL 69
+ AM LA+E + +VKG TYP PPVGAVI+D +G + G G T+P GG HAEV+ALRRAG
Sbjct 4 EAAMALAVEQADRVKGGTYPNPPVGAVILDADGEVAGVGATQPPGGPHAEVMALRRAGRK 63
Query 70 AAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVR 129
AAG VVT+EPCNH+G+TPPCV+AL+ A V VVYAV DPN +A GGA RL +G+ V
Sbjct 64 AAGGTAVVTLEPCNHHGRTPPCVDALLAAEVSAVVYAVPDPNPVAAGGAARLGESGVTVT 123
Query 130 SGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHR 189
+GVL + VA G LREWLHKQRTG PHVTWK+ATS+DGRSAAADGSSQWI+SEAAR D+HR
Sbjct 124 AGVLGDAVAGGVLREWLHKQRTGKPHVTWKFATSVDGRSAAADGSSQWITSEAARTDVHR 183
Query 190 RRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTM 249
RRA+ADAI+VGTGTVL DDP LTARL DGSLA +QPLRVVVGKR+I ++RVLND++RTM
Sbjct 184 RRAVADAIVVGTGTVLVDDPVLTARLPDGSLAERQPLRVVVGKREISSDSRVLNDDSRTM 243
Query 250 MIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDV 309
+IRT +P EVLRALSDRTDV+LEGGPTLAGAFLRAGAI+RI+AYVAPILLGGPVTAVDDV
Sbjct 244 VIRTRDPQEVLRALSDRTDVILEGGPTLAGAFLRAGAIDRIVAYVAPILLGGPVTAVDDV 303
Query 310 GVSNITNALRWQFDSVEKVGPDLLLSLV 337
GV +I +A RW+FD + +GPD+LLSLV
Sbjct 304 GVLSIAHAQRWRFDGITPIGPDVLLSLV 331
>gi|118473539|ref|YP_887383.1| riboflavin biosynthesis protein RibD [Mycobacterium smegmatis
str. MC2 155]
gi|118174826|gb|ABK75722.1| riboflavin biosynthesis protein RibD [Mycobacterium smegmatis
str. MC2 155]
Length=335
Score = 474 bits (1219), Expect = 1e-131, Method: Compositional matrix adjust.
Identities = 230/330 (70%), Positives = 284/330 (87%), Gaps = 0/330 (0%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
S++ AM LAI+ + QVKG TYP PPVGAVI+D +G++ G GGT+P GG HAEV+ALR A
Sbjct 4 SVEAAMRLAIDQAEQVKGATYPNPPVGAVILDRDGQVAGVGGTQPTGGPHAEVMALRAAA 63
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPCNH+G+TPPCV+ L+ A + VVYAVADPN +A GG+ R++++G++
Sbjct 64 ERAEGGTAVVTLEPCNHHGRTPPCVDGLVAAGISRVVYAVADPNPVAAGGSARMASSGIE 123
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V SGVL+++VA GPLREWLHKQRTGLPHVTWK+ATS+DGRSAAADGSSQWI+S AAR D+
Sbjct 124 VTSGVLSDEVAGGPLREWLHKQRTGLPHVTWKFATSVDGRSAAADGSSQWITSAAARADV 183
Query 188 HRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEAR 247
HRRRA ADAI+VGTGTV DDP+LTARL DG+LA +QPLRVVVG+R++ +A VLND++R
Sbjct 184 HRRRAAADAIVVGTGTVFVDDPSLTARLPDGTLADRQPLRVVVGRREVSSDANVLNDDSR 243
Query 248 TMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVD 307
TM+IRTH+P EVLRALSDRTD++LEGGPTLAGAFLRAG +NRILAYVAPILLGGP+TAVD
Sbjct 244 TMVIRTHDPHEVLRALSDRTDIMLEGGPTLAGAFLRAGVVNRILAYVAPILLGGPITAVD 303
Query 308 DVGVSNITNALRWQFDSVEKVGPDLLLSLV 337
DVGV +I +A RW+FD V+ +GPD+L+SLV
Sbjct 304 DVGVPSIAHAQRWRFDCVQTIGPDVLMSLV 333
>gi|145224309|ref|YP_001134987.1| riboflavin biosynthesis protein RibD [Mycobacterium gilvum PYR-GCK]
gi|315444641|ref|YP_004077520.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. Spyr1]
gi|145216795|gb|ABP46199.1| riboflavin biosynthesis protein RibD [Mycobacterium gilvum PYR-GCK]
gi|315262944|gb|ADT99685.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. Spyr1]
Length=333
Score = 447 bits (1149), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 238/330 (73%), Positives = 279/330 (85%), Gaps = 0/330 (0%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
++D AM AI S +VKG TYP PPVGAVI+D +G I G G T P GG HAEVVALRRAG
Sbjct 2 NLDAAMAAAIVQSERVKGRTYPNPPVGAVILDSDGEIAGVGATAPTGGPHAEVVALRRAG 61
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
AAG VVT+EPCNH+G+TPPCV+ALI+A V V +AVADPN A GGA RL+AAG++
Sbjct 62 ERAAGGTAVVTLEPCNHFGRTPPCVDALIDAGVAAVAFAVADPNPAAAGGAARLAAAGVR 121
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V +GV+A+ V GPLREWLHKQRTG PHVTWK+A S+DGRSAAADG+SQWI+SEA+R D+
Sbjct 122 VSAGVVADAVTGGPLREWLHKQRTGKPHVTWKFAASVDGRSAAADGTSQWITSEASRADV 181
Query 188 HRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEAR 247
HRRRA ADAI+ GTGTV ADDPALTARL DGSLA QPLRVVVG R+I P+A VLND++R
Sbjct 182 HRRRAAADAIVAGTGTVFADDPALTARLPDGSLADHQPLRVVVGMREISPDATVLNDDSR 241
Query 248 TMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVD 307
TM+IRT +P EV++AL+DRTDVL+EGGPTLAGAFLRAGAI+RILAYVAPILLGGPVTAVD
Sbjct 242 TMVIRTRDPHEVIQALTDRTDVLVEGGPTLAGAFLRAGAIDRILAYVAPILLGGPVTAVD 301
Query 308 DVGVSNITNALRWQFDSVEKVGPDLLLSLV 337
DVGVS+IT A RW+FD ++ +GPD+LLSLV
Sbjct 302 DVGVSSITQAHRWRFDGMQAIGPDVLLSLV 331
>gi|169629892|ref|YP_001703541.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
abscessus ATCC 19977]
gi|169241859|emb|CAM62887.1| Probable bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
abscessus]
Length=340
Score = 432 bits (1111), Expect = 3e-119, Method: Compositional matrix adjust.
Identities = 217/331 (66%), Positives = 265/331 (81%), Gaps = 0/331 (0%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
+DEAM LAI + +VKG+TYP PPVGAVI+D G++ G GGT P G +HAEVVAL AG
Sbjct 7 LDEAMDLAIRAAEEVKGSTYPNPPVGAVILDAAGQVAGVGGTRPPGQEHAEVVALAGAGA 66
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
A G VVT+EPCNH G+T PCV+AL A V VVYAVADPN A GGA RL G++V
Sbjct 67 AARGGTAVVTLEPCNHQGRTGPCVDALAAAGVSRVVYAVADPNPQAAGGAARLRTLGIEV 126
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
G+ +++V+AGPLREWLHKQRTG PHVTWKY S+DGRSAA DG+SQWI+SE +R D+H
Sbjct 127 LDGLASDRVSAGPLREWLHKQRTGRPHVTWKYGASVDGRSAANDGTSQWITSEQSRADVH 186
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
RRRA ADA+LVGTGTV ADDP LTAR D L P QPLRVVVG R++ +A+VLND++ T
Sbjct 187 RRRAFADAVLVGTGTVFADDPQLTARTPDNELVPHQPLRVVVGMREVSSDAKVLNDDSHT 246
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
M+IRTH+P EVL AL DRTD++LEGGPTLAGAFLRAG ++RILAY+AP+LLGG V AV+D
Sbjct 247 MVIRTHDPAEVLAALGDRTDIILEGGPTLAGAFLRAGLVDRILAYLAPMLLGGNVPAVED 306
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VGV+ ++ ALRW++D +E++GPD+LLSLV R
Sbjct 307 VGVTTLSRALRWEYDQIERMGPDVLLSLVPR 337
>gi|307083979|ref|ZP_07493092.1| riboflavin biosynthesis protein RibD [Mycobacterium tuberculosis
SUMu012]
gi|308366346|gb|EFP55197.1| riboflavin biosynthesis protein RibD [Mycobacterium tuberculosis
SUMu012]
Length=206
Score = 409 bits (1050), Expect = 4e-112, Method: Compositional matrix adjust.
Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)
Query 134 AEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAI 193
AEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAI
Sbjct 1 AEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAI 60
Query 194 ADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIRT 253
ADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIRT
Sbjct 61 ADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIRT 120
Query 254 HEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSN 313
HEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSN
Sbjct 121 HEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSN 180
Query 314 ITNALRWQFDSVEKVGPDLLLSLVAR 339
ITNALRWQFDSVEKVGPDLLLSLVAR
Sbjct 181 ITNALRWQFDSVEKVGPDLLLSLVAR 206
>gi|312139593|ref|YP_004006929.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase ribg [Rhodococcus
equi 103S]
gi|311888932|emb|CBH48245.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase RibG [Rhodococcus
equi 103S]
Length=336
Score = 383 bits (984), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 200/334 (60%), Positives = 249/334 (75%), Gaps = 0/334 (0%)
Query 6 VKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRR 65
+ S+D AM LAI+ S +G+T P PPVGAVI+D +G +VG G T P GG HAEVVAL
Sbjct 1 MTSLDAAMRLAIDASEAARGSTSPNPPVGAVILDASGAVVGVGATRPPGGPHAEVVALAA 60
Query 66 AGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAG 125
AG A G VVT+EPCNH G+T PC ALI+A + V Y+VADPN A GGA L AA
Sbjct 61 AGERARGGTAVVTLEPCNHQGRTGPCSRALIDAGIAAVHYSVADPNPAAAGGADTLRAAR 120
Query 126 LQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARL 185
++V G+LA+ GPLR WLH+QRTG PHVTWK+A ++DGRSAAADG+SQWI+ AR
Sbjct 121 IEVTGGLLADDAERGPLRAWLHRQRTGRPHVTWKFAATLDGRSAAADGTSQWITGPEARA 180
Query 186 DLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDE 245
+H RA DAI+VGTGTVLADDP LTARL DGSLAP QPLRVVVG R +P ARVL+D
Sbjct 181 RVHADRARLDAIVVGTGTVLADDPWLTARLPDGSLAPHQPLRVVVGNRPVPSTARVLDDA 240
Query 246 ARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTA 305
A T+++RTH+ E+L AL+D+ DVL+EGGP LAGAFL AG ++R+ AY+AP++LG A
Sbjct 241 APTLVLRTHDVGEILSALADQDDVLVEGGPRLAGAFLAAGVVDRVQAYIAPVVLGAGSHA 300
Query 306 VDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
V+D GVS IT ALR++ ++VE +G DLLL+L+ R
Sbjct 301 VEDAGVSTITEALRFRRENVEVLGDDLLLNLIPR 334
>gi|226366358|ref|YP_002784141.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Rhodococcus opacus
B4]
gi|226244848|dbj|BAH55196.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Rhodococcus opacus
B4]
Length=354
Score = 375 bits (964), Expect = 4e-102, Method: Compositional matrix adjust.
Identities = 201/329 (62%), Positives = 242/329 (74%), Gaps = 0/329 (0%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
+D AM +AI + +G T P P VGAV++D GRI G G T+P GG HAEVVALR AG
Sbjct 14 LDAAMQIAIGAAESARGFTSPNPAVGAVVLDAAGRIAGVGMTQPPGGPHAEVVALREAGD 73
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
A G VVT+EPCNH+G+T PC AL++A V V YAV DPN A GGA L +AG++V
Sbjct 74 AARGGTAVVTLEPCNHHGRTGPCSQALLDAGVVAVHYAVGDPNPEAAGGAEALVSAGVEV 133
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
SG+ A+ V GPLR WLH+QRTG PHVTWKYA ++DGRSAAADG+SQWI+ AR +H
Sbjct 134 TSGLRADDVERGPLRAWLHRQRTGRPHVTWKYAATLDGRSAAADGTSQWITGPEARERVH 193
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
RA DAI+VGTGTVLADDP LTAR DGSLA QP+RVVVG DIPP ARVL+D A T
Sbjct 194 ADRAKLDAIVVGTGTVLADDPRLTARTPDGSLAAHQPVRVVVGLGDIPPGARVLDDSAPT 253
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
+ +RT + EVL ALS+ TDVLLEGGP LAGAFL AG ++RI AY+AP++LG +AV +
Sbjct 254 LRLRTRDVDEVLAALSEYTDVLLEGGPRLAGAFLAAGRVDRIQAYLAPLILGAGASAVSE 313
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLV 337
GV I ALR++ +SVE +GPDLLLSLV
Sbjct 314 AGVHTIGGALRFRHESVETIGPDLLLSLV 342
>gi|111024118|ref|YP_707090.1| riboflavin biosynthesis protein RibD [Rhodococcus jostii RHA1]
gi|110823648|gb|ABG98932.1| riboflavin biosynthesis protein RibD [Rhodococcus jostii RHA1]
Length=350
Score = 375 bits (962), Expect = 7e-102, Method: Compositional matrix adjust.
Identities = 198/329 (61%), Positives = 244/329 (75%), Gaps = 0/329 (0%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
+D AM +AI + +G T P P VGAV++D GRI G G T+P GG HAEVVALR AG
Sbjct 10 LDAAMQIAIGAAESARGFTSPNPAVGAVVLDAAGRIAGVGMTQPPGGPHAEVVALREAGD 69
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
A G VVT+EPCNH+G+T PC AL++A V V YAV DPN A GGA L +AG++V
Sbjct 70 AARGGTAVVTLEPCNHHGRTGPCSQALLDAGVVAVHYAVGDPNPEAAGGAETLISAGVEV 129
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
SG+ A+ V GPLR WLH+QRTG PHVTWKYA ++DGRSAAADG+SQWI+ AR +H
Sbjct 130 TSGLRAQDVERGPLRAWLHRQRTGRPHVTWKYAATLDGRSAAADGTSQWITGPEARERVH 189
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
RA DAI+VGTGTVLADDP LTAR+ DGSLA QP+RVVVG DIP +ARVL+D A T
Sbjct 190 ADRAKLDAIVVGTGTVLADDPRLTARMPDGSLAAHQPVRVVVGLGDIPADARVLDDSAPT 249
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
+++RTH+ EVL AL++ TDVLLEGGP LAGAFL AG ++RI AY+AP++LG +AV +
Sbjct 250 LLLRTHDVDEVLAALAEYTDVLLEGGPRLAGAFLAAGRVDRIQAYLAPLILGAGTSAVAE 309
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLV 337
GV I ALR++ +SVE +G +LLLSLV
Sbjct 310 AGVHTIDGALRFRHESVETIGSELLLSLV 338
>gi|257055601|ref|YP_003133433.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil
reductase [Saccharomonospora
viridis DSM 43017]
gi|256585473|gb|ACU96606.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil
reductase [Saccharomonospora
viridis DSM 43017]
Length=349
Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/333 (60%), Positives = 238/333 (72%), Gaps = 2/333 (0%)
Query 7 KSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRA 66
+ + EAM +A+ S V+G T P PPVGAVI+D GR VG G T+P G HAEVVALR A
Sbjct 9 RVVREAMEVALALSAGVRGNTSPNPPVGAVILDAEGRRVGTGATQPPPGPHAEVVALREA 68
Query 67 GGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGL 126
G A G VVT+EPC+H+G+TPPC AL++A V V YAVADP+ A GGA RL AAG+
Sbjct 69 GERARGGTAVVTLEPCSHHGRTPPCTQALLDAGVAAVRYAVADPHPAASGGAERLRAAGV 128
Query 127 QVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLD 186
V GVLAE+VA+GPLR WLH++RTG PHVTWKYA S+DGR AAADG+S+WIS +R +
Sbjct 129 DVAGGVLAEEVASGPLRAWLHRERTGRPHVTWKYAASLDGRVAAADGTSRWISGPTSRAE 188
Query 187 LHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEA 246
+H RA DAI+VGTGTVL DDP LT R DG LAP+QPLRVVVG R IP ARVL+ A
Sbjct 189 VHALRAAVDAIVVGTGTVLTDDPWLTVRTPDGELAPRQPLRVVVGTRGIPEGARVLDSTA 248
Query 247 RTMMIRTHEPMEVLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVT 304
T+ I +H+P EVL LS+R DVLLEGGPTLAGAF+ AG ++RI+AYVAP LLG
Sbjct 249 ETVRIASHDPDEVLALLSERGVVDVLLEGGPTLAGAFVAAGRVDRIIAYVAPTLLGAGPA 308
Query 305 AVDDVGVSNITNALRWQFDSVEKVGPDLLLSLV 337
A+ GVS IT A W+ + G D+ +S V
Sbjct 309 ALGPAGVSTITQAHHWRVEGATMCGEDVRISAV 341
>gi|333919547|ref|YP_004493128.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481768|gb|AEF40328.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Amycolicicoccus
subflavus DQS3-9A1]
Length=334
Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 191/331 (58%), Positives = 244/331 (74%), Gaps = 0/331 (0%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
+ +AM LA++ S QV+GTT P PPVGAVI+D G +VG G T+P GG HAEVVAL++AG
Sbjct 4 LSDAMRLAVQASEQVRGTTSPNPPVGAVILDVGGNVVGVGATQPPGGPHAEVVALKQAGA 63
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
A G VVT+EPC+H+G+TPPC ALIE+ V V YAV+DP A GGA L+ AG+ V
Sbjct 64 RAFGGTAVVTLEPCDHFGRTPPCTKALIESGVAQVHYAVSDPVAEAAGGARALAHAGIVV 123
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
+ V GPLR WLH+QRTG PHVT+KYA S+DGR AAADGSSQWISS +R
Sbjct 124 TAWHDPAPVTQGPLRAWLHRQRTGRPHVTYKYAASLDGRCAAADGSSQWISSVESRARDR 183
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
R DAI+VGTGTV ADDP LTAR DG+LA QP+RVV+G+RD+P +RV +D A T
Sbjct 184 LERTRVDAIVVGTGTVYADDPWLTARAPDGTLADHQPIRVVMGERDLPSGSRVTDDAAPT 243
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
++R+ +PM+V+ AL D DV++EGGPT+AGAFLRAG ++RI AYVAPI+LG AV D
Sbjct 244 RIVRSRDPMDVIEALDDCLDVVVEGGPTVAGAFLRAGLVDRITAYVAPIVLGAGPAAVAD 303
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
GV NI+ A+R+Q +SV+++G D+L+SL+ R
Sbjct 304 AGVGNISGAIRFQCESVDRLGDDVLISLIPR 334
>gi|226306507|ref|YP_002766467.1| riboflavin biosynthesis bifunctional protein RibG [Rhodococcus
erythropolis PR4]
gi|226185624|dbj|BAH33728.1| riboflavin biosynthesis bifunctional protein RibG [Rhodococcus
erythropolis PR4]
Length=350
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/314 (60%), Positives = 225/314 (72%), Gaps = 0/314 (0%)
Query 24 KGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAAGAIVVVTMEPCN 83
+G T P PPVGAVI+ +G I G G T+P GG HAEVVAL AG A G VVT+EPCN
Sbjct 27 RGFTSPNPPVGAVILAADGTIAGVGMTQPPGGPHAEVVALDEAGDAARGGTAVVTLEPCN 86
Query 84 HYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLR 143
H G+T PC ALI+A V VVYAV DPN A GGA L AG+ V +G+ A +V AGPLR
Sbjct 87 HQGRTGPCSQALIDAGVSAVVYAVGDPNPEASGGAATLMRAGISVTAGLRAPEVEAGPLR 146
Query 144 EWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAILVGTGT 203
WLHKQRTG PH+TWKYA S+DGRSAA DG+SQWI+ AR +H +RA DAI+VGTGT
Sbjct 147 AWLHKQRTGRPHITWKYAASLDGRSAAEDGTSQWITGPQARARVHAQRAQIDAIVVGTGT 206
Query 204 VLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIRTHEPMEVLRAL 263
V ADDP LTAR G LA QP+RVVVGKR+IP A VL+D A T+++ T EV+ AL
Sbjct 207 VFADDPWLTARQPTGELAAHQPVRVVVGKREIPSTASVLDDTAPTLVLNTDNIDEVVEAL 266
Query 264 SDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSNITNALRWQFD 323
+ TDVLLEGGP LAGAFL AG ++ I AY+APILLG +A+ D GV IT+A R++ +
Sbjct 267 GEYTDVLLEGGPRLAGAFLAAGYVDVIEAYIAPILLGAGASALVDAGVHTITDAHRFRLE 326
Query 324 SVEKVGPDLLLSLV 337
S +GPD+LLSLV
Sbjct 327 SAVTIGPDILLSLV 340
>gi|229493689|ref|ZP_04387474.1| riboflavin biosynthesis protein RibD [Rhodococcus erythropolis
SK121]
gi|229319650|gb|EEN85486.1| riboflavin biosynthesis protein RibD [Rhodococcus erythropolis
SK121]
Length=350
Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/314 (60%), Positives = 225/314 (72%), Gaps = 0/314 (0%)
Query 24 KGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAAGAIVVVTMEPCN 83
+G T P PPVGAVI+ +G I G G T+P GG HAEVVAL AG A G VVT+EPCN
Sbjct 27 RGFTSPNPPVGAVILAADGTIAGVGMTQPPGGPHAEVVALDEAGDAARGGTAVVTLEPCN 86
Query 84 HYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLR 143
H G+T PC ALI+A V VVYAV DPN A GGA L AG+ V +G+ A +V AGPLR
Sbjct 87 HQGRTGPCSQALIDAGVSAVVYAVGDPNPEASGGAATLMRAGISVTAGLRAPEVEAGPLR 146
Query 144 EWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAILVGTGT 203
WLHKQRTG PH+TWKYA S+DGRSAA DG+SQWI+ AR +H +RA DAI+VGTGT
Sbjct 147 AWLHKQRTGRPHITWKYAASLDGRSAAEDGTSQWITGPQARARVHAQRAQIDAIVVGTGT 206
Query 204 VLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIRTHEPMEVLRAL 263
V ADDP LTAR G LA QP+RVVVGKR+IP A +L+D A T+++ T EV+ AL
Sbjct 207 VFADDPWLTARQPTGELAAHQPVRVVVGKREIPSTASILDDTAPTLVLNTDNVDEVVEAL 266
Query 264 SDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSNITNALRWQFD 323
+ TDVLLEGGP LAGAFL AG ++ I AY+APILLG +A+ D GV IT+A R++ +
Sbjct 267 GEYTDVLLEGGPRLAGAFLAAGYVDVIEAYIAPILLGAGASALVDAGVHTITDAHRFRLE 326
Query 324 SVEKVGPDLLLSLV 337
S +GPD+LLSLV
Sbjct 327 SAVTIGPDILLSLV 340
>gi|317508958|ref|ZP_07966591.1| riboflavin biosynthesis protein RibD [Segniliparus rugosus ATCC
BAA-974]
gi|316252723|gb|EFV12160.1| riboflavin biosynthesis protein RibD [Segniliparus rugosus ATCC
BAA-974]
Length=363
Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 177/309 (58%), Positives = 223/309 (73%), Gaps = 0/309 (0%)
Query 29 PKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAAGAIVVVTMEPCNHYGKT 88
P+PPVGAV+V P G+IVG G T+P G HAEV+A+ AG A GA VT+EPC+H G+T
Sbjct 43 PEPPVGAVLVSPGGQIVGRGVTQPPGQAHAEVMAIAEAGERARGATAYVTLEPCDHVGRT 102
Query 89 PPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLREWLHK 148
PC ALI A + VVYAV DPN + GGA L AAG++VRSGVLA++V GPLREWLH
Sbjct 103 GPCSRALIAAGIAEVVYAVPDPNPRSSGGARTLEAAGVRVRSGVLADEVRKGPLREWLHV 162
Query 149 QRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAILVGTGTVLADD 208
QRTG PHVTWK+A ++DGR+AA DG+SQWI+ R +H R DAI+VGTGT LADD
Sbjct 163 QRTGRPHVTWKFAATLDGRAAAKDGTSQWITGPQIRESVHATRGELDAIIVGTGTALADD 222
Query 209 PALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIRTHEPMEVLRALSDRTD 268
P LTARL DGSLAP QP RVV+G R++P ARVL+D A T++ +TH+P E L L D+
Sbjct 223 PWLTARLPDGSLAPHQPTRVVMGTRELPEAARVLDDAAPTVLAKTHDPAEALAMLGDKVH 282
Query 269 VLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSNITNALRWQFDSVEKV 328
VLLEGGP LA AFL+AG ++ + A++AP LLG AV D+GV + +ALR+ + V +V
Sbjct 283 VLLEGGPKLAAAFLKAGLVDLVHAHLAPALLGAGPLAVGDLGVGTLADALRFSVEDVRQV 342
Query 329 GPDLLLSLV 337
G D+ + LV
Sbjct 343 GGDIAVRLV 351
>gi|291003622|ref|ZP_06561595.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil
reductase [Saccharopolyspora
erythraea NRRL 2338]
Length=348
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/332 (56%), Positives = 229/332 (69%), Gaps = 2/332 (0%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
++ AM AI + V+GTT P PPVG V++D G + G G T P GG HAEVVALR AG
Sbjct 12 ALSSAMRTAIGAAEGVRGTTSPNPPVGCVVLDAAGAVAGIGATRPPGGPHAEVVALREAG 71
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPC+H G+TPPC +AL+ A V VV+AV+DP +A GGA L AAG++
Sbjct 72 ERARGGTAVVTLEPCSHTGRTPPCTDALLAAGVARVVHAVSDPMPVAAGGADILRAAGVE 131
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V SG+LAE+ +GPLR WLH RTG PHVTWKYA ++DGRSAAADG+S+WISS AR ++
Sbjct 132 VHSGLLAEEAESGPLRAWLHFARTGRPHVTWKYAATLDGRSAAADGTSKWISSPEARAEV 191
Query 188 HRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEAR 247
H R DA++ GTGTVLADDP LTAR +G L QPLRVVVG R +P ARVL+D A
Sbjct 192 HELRRRMDAVVAGTGTVLADDPQLTARTPEGGLHEHQPLRVVVGNRPVPAGARVLDDTAE 251
Query 248 TMMIRTHEPMEVLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTA 305
T+++ +P VL L+ R DVLLEGGP LAGAF AG I+R+L Y+AP LLG A
Sbjct 252 TLLLPASDPDTVLAELAGRGAVDVLLEGGPVLAGAFAAAGRIDRVLGYIAPALLGSGRAA 311
Query 306 VDDVGVSNITNALRWQFDSVEKVGPDLLLSLV 337
+ D GV +I+ A R + V VGPD+ +S V
Sbjct 312 LGDAGVGSISQAFRLHVEQVTMVGPDVRVSAV 343
>gi|134098691|ref|YP_001104352.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil
reductase [Saccharopolyspora
erythraea NRRL 2338]
gi|133911314|emb|CAM01427.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil
reductase [Saccharopolyspora
erythraea NRRL 2338]
Length=345
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/332 (56%), Positives = 229/332 (69%), Gaps = 2/332 (0%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
++ AM AI + V+GTT P PPVG V++D G + G G T P GG HAEVVALR AG
Sbjct 9 ALSSAMRTAIGAAEGVRGTTSPNPPVGCVVLDAAGAVAGIGATRPPGGPHAEVVALREAG 68
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPC+H G+TPPC +AL+ A V VV+AV+DP +A GGA L AAG++
Sbjct 69 ERARGGTAVVTLEPCSHTGRTPPCTDALLAAGVARVVHAVSDPMPVAAGGADILRAAGVE 128
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V SG+LAE+ +GPLR WLH RTG PHVTWKYA ++DGRSAAADG+S+WISS AR ++
Sbjct 129 VHSGLLAEEAESGPLRAWLHFARTGRPHVTWKYAATLDGRSAAADGTSKWISSPEARAEV 188
Query 188 HRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEAR 247
H R DA++ GTGTVLADDP LTAR +G L QPLRVVVG R +P ARVL+D A
Sbjct 189 HELRRRMDAVVAGTGTVLADDPQLTARTPEGGLHEHQPLRVVVGNRPVPAGARVLDDTAE 248
Query 248 TMMIRTHEPMEVLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTA 305
T+++ +P VL L+ R DVLLEGGP LAGAF AG I+R+L Y+AP LLG A
Sbjct 249 TLLLPASDPDTVLAELAGRGAVDVLLEGGPVLAGAFAAAGRIDRVLGYIAPALLGSGRAA 308
Query 306 VDDVGVSNITNALRWQFDSVEKVGPDLLLSLV 337
+ D GV +I+ A R + V VGPD+ +S V
Sbjct 309 LGDAGVGSISQAFRLHVEQVTMVGPDVRVSAV 340
>gi|296395033|ref|YP_003659917.1| riboflavin biosynthesis protein RibD [Segniliparus rotundus DSM
44985]
gi|296182180|gb|ADG99086.1| riboflavin biosynthesis protein RibD [Segniliparus rotundus DSM
44985]
Length=343
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 188/329 (58%), Positives = 233/329 (71%), Gaps = 1/329 (0%)
Query 9 IDEA-MGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
+DEA M AI S +G T P PPVGAV+V P+G+IVG G T P G +HAEVVAL +AG
Sbjct 8 VDEAFMREAIAVSRLARGRTSPNPPVGAVLVSPDGQIVGRGATRPPGQEHAEVVALAQAG 67
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A GA VT+EPCNH G+T PC AL++A V VV AV DPN +GGGA L AAG+
Sbjct 68 ERARGATAYVTLEPCNHVGRTGPCARALVDAGVAAVVCAVPDPNQRSGGGAKTLEAAGVG 127
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
VR GVLA + GPLREWLH QRTG PHVTWK+A ++DGRSAA DGSSQWI+ R +
Sbjct 128 VRVGVLAHEARTGPLREWLHAQRTGRPHVTWKFAATLDGRSAARDGSSQWITGPQIRKSV 187
Query 188 HRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEAR 247
H RA DAI+VGTGT LADDP LTARL DGSLAP+QP RVVVG ++P ARVL+ A
Sbjct 188 HAVRAELDAIIVGTGTALADDPWLTARLPDGSLAPRQPTRVVVGMTELPRGARVLDGSAP 247
Query 248 TMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVD 307
T++ +T +P E L L D VLLEGGPTLA AFLRAG ++ + A++AP+LLG A+
Sbjct 248 TVLAKTRDPAEALAMLGDAVHVLLEGGPTLAAAFLRAGLVDLVQAHIAPVLLGAGPAALG 307
Query 308 DVGVSNITNALRWQFDSVEKVGPDLLLSL 336
D+G++ + +ALR+ + V +VG D+L+ L
Sbjct 308 DLGIATLADALRFTVEEVRQVGRDVLVQL 336
>gi|331697233|ref|YP_004333472.1| riboflavin biosynthesis protein RibD [Pseudonocardia dioxanivorans
CB1190]
gi|326951922|gb|AEA25619.1| riboflavin biosynthesis protein RibD [Pseudonocardia dioxanivorans
CB1190]
Length=385
Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/320 (57%), Positives = 220/320 (69%), Gaps = 4/320 (1%)
Query 20 SYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAAGAIVVVTM 79
S +V GTT P PPVG V++D +GR+ G G T P GG HAEV AL AG A G VVT+
Sbjct 32 SARVHGTTSPNPPVGCVVLDRDGRVAGTGATAPPGGPHAEVAALAEAGERARGGTAVVTL 91
Query 80 EPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGVLAEQVAA 139
EPC H+G+TPPC +AL A + V VADPN +A GGA L AAG+ V G L +VAA
Sbjct 92 EPCAHHGRTPPCTDALRAAGIVAVHAGVADPNPVAAGGAAVLRAAGVDVTVGTLGAEVAA 151
Query 140 GPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAILV 199
GPLR WLH RTG PHVTWK+A ++DGRSAAADGSS+WI+ AAR +H RA +DA++V
Sbjct 152 GPLRGWLHATRTGRPHVTWKFAATLDGRSAAADGSSRWITGPAARARVHALRATSDAVVV 211
Query 200 GTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIRTHEPMEV 259
GTGT LADDPALTAR A G+ P+QPLRV+VG R P + + D + +RTH+P EV
Sbjct 212 GTGTALADDPALTARDAAGTPVPRQPLRVLVGLRHPRPGSHL--DAPDVLHLRTHDPDEV 269
Query 260 LRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSNITNA 317
L AL R DVLLEGGP LAGAFL AG ++R+LA++AP LLG A+ D GV I +
Sbjct 270 LAALHARGVVDVLLEGGPRLAGAFLAAGRVDRVLAHLAPALLGAGPAALADAGVGTIADI 329
Query 318 LRWQFDSVEKVGPDLLLSLV 337
LR Q SVE VG DL++ V
Sbjct 330 LRLQVASVELVGGDLVVDAV 349
>gi|262202280|ref|YP_003273488.1| riboflavin biosynthesis protein RibD [Gordonia bronchialis DSM
43247]
gi|262085627|gb|ACY21595.1| riboflavin biosynthesis protein RibD [Gordonia bronchialis DSM
43247]
Length=333
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/317 (57%), Positives = 219/317 (70%), Gaps = 2/317 (0%)
Query 13 MGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAAG 72
M AI S +G + P PPVGAVIVD G IVG G T P GG HAE+VAL +AG A G
Sbjct 7 MRQAITESAAAQGVSTPNPPVGAVIVDRAGTIVGVGHTAPPGGPHAEIVALTQAGAAARG 66
Query 73 AIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGV 132
A VVT+EPCNH G+T PC ALI A V V + VADPN A GGA L AAG+ V +GV
Sbjct 67 ATAVVTLEPCNHTGRTGPCSQALIAAGVAHVCFGVADPNPTAAGGADTLRAAGVSVDAGV 126
Query 133 LAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRA 192
LA++VAAGPL+ WLH+Q TG P VT K ATSIDGR AA+DG+SQW++ AAR H RR+
Sbjct 127 LADEVAAGPLQPWLHRQTTGRPFVTVKLATSIDGRVAASDGTSQWVTGPAARAHAHERRS 186
Query 193 IADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIR 252
DAI+VGTGT LADDP+LTAR DG+ P QP RVVVG RD+P +A + +D A + +
Sbjct 187 RIDAIVVGTGTALADDPSLTARRPDGTRYPHQPTRVVVGHRDLPADANLRDDAAPLLRVA 246
Query 253 THEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVS 312
T EP EVL AL D VL+EGGPTLAGAF+ AG ++ + AYVAP+LLG AVD ++
Sbjct 247 TREPAEVLDALDDALWVLVEGGPTLAGAFVAAGLVDSVEAYVAPVLLGAGRNAVDVPTIT 306
Query 313 NITNALRWQFDSVEKVG 329
+ +A+R F + E VG
Sbjct 307 TLADAVR--FTTREVVG 321
>gi|324999324|ref|ZP_08120436.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pseudonocardia
sp. P1]
Length=368
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/334 (55%), Positives = 226/334 (68%), Gaps = 5/334 (1%)
Query 7 KSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRA 66
++ AM A+ S V GTT P P VG V++D G +VG G T P GG HAE VAL A
Sbjct 26 DAVPAAMRRALAASDLVHGTTSPNPAVGCVVLDRAGAVVGTGATTPPGGPHAERVALAEA 85
Query 67 GGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGL 126
G AAG VVT+EPCNH G+TPPCV+ L+EA + V A+ADPN +A GG RL AAG+
Sbjct 86 GDRAAGGTAVVTLEPCNHSGRTPPCVDGLLEAGIARVYAALADPNPVAAGGLDRLRAAGI 145
Query 127 QVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLD 186
+V G LA +V GPLR WLH+Q TG PHVTWK AT++DGR AAADG+S+WI+ AR +
Sbjct 146 EVTLGTLAGEVGRGPLRGWLHRQHTGRPHVTWKVATTLDGRVAAADGTSRWITGPEARGE 205
Query 187 LHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLN--- 243
+H R DAI+ GTGTVL DDPALTAR DG+L QPLRVVVG RD+PP AR+ N
Sbjct 206 VHDLRRRMDAIVAGTGTVLDDDPALTARRPDGTLFDHQPLRVVVGHRDVPPGARLSNRAA 265
Query 244 DEARTMMIRTHEPMEVLRAL--SDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGG 301
EA + +RT +P EVL L D DVLLEGGPTLAGAF+ AGA++R+L ++AP LLG
Sbjct 266 GEAEVVHLRTRDPGEVLAELVRRDTVDVLLEGGPTLAGAFVAAGAVDRVLVHLAPALLGA 325
Query 302 PVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLS 335
A+ D GV I + +R Q D V + G D+++
Sbjct 326 GPHALGDAGVGTIADIVRLQVDEVRRSGGDVVID 359
>gi|343924571|ref|ZP_08764119.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Gordonia alkanivorans
NBRC 16433]
gi|343765506|dbj|GAA11045.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Gordonia alkanivorans
NBRC 16433]
Length=341
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/326 (51%), Positives = 218/326 (67%), Gaps = 1/326 (0%)
Query 12 AMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAA 71
AM +A+E S+ G + P PPVGAVI+ +G + G G T+PAGG HAEV+ALR AG A
Sbjct 6 AMDIAVEASFAAMGVSSPNPPVGAVILTADGAVAGVGATQPAGGPHAEVMALRAAGEAAR 65
Query 72 GAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSG 131
G +VT+EPCNH G+T PC ALIEA V V YAV+D N +A GGA L AAG++V G
Sbjct 66 GGTAIVTLEPCNHTGRTGPCSQALIEAGVAEVHYAVSDRNPVAAGGADTLRAAGIRVTGG 125
Query 132 VLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRR 191
V + V GPLR WL +QR G P VT K A IDGR AA DG+SQWI+ AAR H++R
Sbjct 126 VAVDAVENGPLRPWLTRQRLGRPMVTAKIAAGIDGRIAAPDGTSQWITGPAARDHAHQQR 185
Query 192 AIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMM- 250
+ DAI++GTGT LAD+P LTAR ADG L P QP RVV+G RD+P +A + D ++
Sbjct 186 SRLDAIVIGTGTALADNPTLTARTADGGLYPHQPARVVLGHRDLPADANLRGDTGGPLVC 245
Query 251 IRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVG 310
+ +H P +VL AL D VL+EGGP + GAF A ++ + AYVAP++LG ++V+ G
Sbjct 246 VDSHHPADVLSALPDALWVLVEGGPHILGAFFAADLVDEVHAYVAPMVLGAGRSSVEIPG 305
Query 311 VSNITNALRWQFDSVEKVGPDLLLSL 336
V+ + +A R++ V +G D+L++L
Sbjct 306 VTTLDDARRFETREVTTLGSDILIAL 331
>gi|284033021|ref|YP_003382952.1| riboflavin biosynthesis protein RibD [Kribbella flavida DSM 17836]
gi|283812314|gb|ADB34153.1| riboflavin biosynthesis protein RibD [Kribbella flavida DSM 17836]
Length=344
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/328 (52%), Positives = 213/328 (65%), Gaps = 5/328 (1%)
Query 13 MGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAAG 72
M AIE + + G+T+P P VG VI +G G G AGG HAEV ALR AG A G
Sbjct 12 MRRAIELAARGLGSTHPNPVVGCVITGRDGHPAGEGFHAVAGGPHAEVAALRMAGDRARG 71
Query 73 AIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGV 132
VT+EPCNH G+T PC +ALIEA V V+YAV DPN A GGA +L + + V G+
Sbjct 72 GTAYVTLEPCNHTGRTGPCADALIEAGVARVLYAVPDPNRQAAGGADKLRSKNVHVEQGL 131
Query 133 L-AEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRR 191
L AE A + WLH R G P VTWK+AT++DGRSAA D SS+WI+ E AR D+HR+R
Sbjct 132 LRAEAEAVNHV--WLHSVRMGRPFVTWKFATTLDGRSAAPDRSSRWITGEQARADVHRQR 189
Query 192 AIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMI 251
A DAI VGT TVL DDP LT R A +QPLRVVVG R+IP ARV ND A T+++
Sbjct 190 AECDAIAVGTQTVLTDDPELTVRDAQDRPVGRQPLRVVVGDREIPATARVRNDRAETLLL 249
Query 252 RTHEPMEVLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDV 309
TH+P EVLR L D + LEGGPTLA AFLR+G +++I+AYVAP +LG A+ D+
Sbjct 250 PTHDPAEVLRQLDDHHIRHLWLEGGPTLAAAFLRSGLVDQIVAYVAPAVLGSGFAAIGDL 309
Query 310 GVSNITNALRWQFDSVEKVGPDLLLSLV 337
G +I + R+Q V ++G D+ L+L
Sbjct 310 GAESIDHLRRFQLADVTRLGDDVRLTLT 337
>gi|325676732|ref|ZP_08156406.1| riboflavin biosynthesis protein RibD [Rhodococcus equi ATCC 33707]
gi|325552514|gb|EGD22202.1| riboflavin biosynthesis protein RibD [Rhodococcus equi ATCC 33707]
Length=263
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/261 (61%), Positives = 201/261 (78%), Gaps = 0/261 (0%)
Query 79 MEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGVLAEQVA 138
+EPCNH G+T PC ALI+A + V Y+VADPN A GGA L AA ++V G+LA+
Sbjct 1 LEPCNHQGRTGPCSRALIDAGIAAVHYSVADPNPAAAGGADTLRAARIEVTGGLLADDAE 60
Query 139 AGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAIL 198
GPLR WLH+QRTG PHVTWK+A ++DGRSAAADG+SQWI+ AR +H RA DAI+
Sbjct 61 RGPLRAWLHRQRTGRPHVTWKFAATLDGRSAAADGTSQWITGPEARARVHADRARLDAIV 120
Query 199 VGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIRTHEPME 258
VGTGTVLADDP LTAR+ DGSLAP QPLRVVVG R +P ARVL+D A T+++RTH+ E
Sbjct 121 VGTGTVLADDPWLTARMPDGSLAPHQPLRVVVGNRPVPSTARVLDDAAPTLVLRTHDVGE 180
Query 259 VLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSNITNAL 318
+L AL+D+ DVL+EGGP LAGAFL AGA++R+ AY+AP++LG AV+D GVS IT AL
Sbjct 181 ILSALADQDDVLVEGGPRLAGAFLAAGAVDRVQAYIAPVVLGAGSHAVEDAGVSTITEAL 240
Query 319 RWQFDSVEKVGPDLLLSLVAR 339
R++ ++VE +G DLLL+L+ R
Sbjct 241 RFRRENVEVLGDDLLLNLIPR 261
>gi|326382172|ref|ZP_08203864.1| riboflavin biosynthesis protein RibD [Gordonia neofelifaecis
NRRL B-59395]
gi|326198902|gb|EGD56084.1| riboflavin biosynthesis protein RibD [Gordonia neofelifaecis
NRRL B-59395]
Length=339
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/332 (50%), Positives = 211/332 (64%), Gaps = 0/332 (0%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
+I AM AI S +G T P PPVGAV++D +G I G G T+P GG HAEV+ALR AG
Sbjct 5 AIVAAMRRAIAESEAAQGFTTPNPPVGAVVLDADGEIAGVGRTQPPGGPHAEVMALRAAG 64
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPC+H G+T PC AL+ A + V +AVADPN A GGA L AAG+
Sbjct 65 ERARGGTAVVTLEPCDHTGRTGPCTQALLSAGIADVHFAVADPNPDAAGGAQTLRAAGVD 124
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V GVL + +GPL+ WL +Q+TG P VT K A + DGR AA DGSSQWI+ AR
Sbjct 125 VHPGVLESEARSGPLKYWLFRQKTGRPFVTAKIAATADGRIAAPDGSSQWITGPQAREHA 184
Query 188 HRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEAR 247
H R DAI+VGTGTVL DDP+LTAR DG L QP RVV+G R++P ARV + A
Sbjct 185 HEVRGRLDAIVVGTGTVLVDDPSLTARRPDGRLLDHQPTRVVLGLREVPAAARVRDGSAP 244
Query 248 TMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVD 307
+ + + +P V+ AL D VL+EGGP + GAFL AG ++ I AY+AP +LG AV
Sbjct 245 FVHVASRDPRAVVDALPDALHVLVEGGPEVIGAFLAAGLVDEIHAYLAPTILGAGRAAVS 304
Query 308 DVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
D V+ + A R++ + ++G D+LL L R
Sbjct 305 DESVATLAQAHRFRRSGLLELGEDILLILEPR 336
>gi|296140262|ref|YP_003647505.1| riboflavin biosynthesis protein RibD [Tsukamurella paurometabola
DSM 20162]
gi|296028396|gb|ADG79166.1| riboflavin biosynthesis protein RibD [Tsukamurella paurometabola
DSM 20162]
Length=332
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/329 (50%), Positives = 212/329 (65%), Gaps = 4/329 (1%)
Query 9 IDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGG 68
ID A+ LAIE S +G + P PPVGAVI+ +G + G G T PAGG HAEVVAL AG
Sbjct 7 IDAALTLAIEESVAARGVSTPNPPVGAVILAADGTVAGRGRTAPAGGPHAEVVALAEAGD 66
Query 69 LAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQV 128
A G VVT+EPC+H G+T PC ALI A + V YA ADPN +A GGA L +AGL V
Sbjct 67 AARGGTAVVTLEPCDHTGRTGPCTQALIAAGIARVAYAAADPNPVAAGGAATLRSAGLDV 126
Query 129 RSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLH 188
V PL EWL +QR G P VT K A ++DGR AA DG+SQWI+ AAR +H
Sbjct 127 TH----LGVEPWPLTEWLFRQRHGRPMVTVKLAATVDGRIAAPDGTSQWITGPAARARVH 182
Query 189 RRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEART 248
RA DAI+VGTGTV DDPALTAR DGSL QP R+V+G R++ A++ +
Sbjct 183 AERAQLDAIIVGTGTVAVDDPALTARRPDGSLYRHQPNRIVIGDREVSSGAKIFAAPGKV 242
Query 249 MMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDD 308
+ + H+P L A +D V +EGG T+ GAFL AG ++R+ AY+AP+LLG + A+
Sbjct 243 VRVHGHDPRAALAAAADAVHVQVEGGSTVIGAFLAAGLVDRVQAYIAPVLLGAGLAALSV 302
Query 309 VGVSNITNALRWQFDSVEKVGPDLLLSLV 337
G+ + +ALR + DSVE++G D+LL+L+
Sbjct 303 PGIGTLGDALRMRLDSVERLGDDVLLTLL 331
>gi|302866839|ref|YP_003835476.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca
ATCC 27029]
gi|302569698|gb|ADL45900.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca
ATCC 27029]
Length=353
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/346 (52%), Positives = 221/346 (64%), Gaps = 15/346 (4%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
S+DEAM AIE + + G T P P VG V++D +G +VG G AGG HAE+VAL +AG
Sbjct 5 SVDEAMRRAIELAVRGLGATSPNPVVGCVLLDTDGEVVGEGFHAYAGGPHAEIVALAQAG 64
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPC+H G+T PC +ALI A V VV AV DPN +A GGA L AAG+Q
Sbjct 65 TRARGGTAVVTLEPCDHTGRTGPCSHALIAAGVSRVVIAVPDPNPVASGGAATLRAAGVQ 124
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V GV A++ AG + WL R G P+V WKYA ++DGRSAAADG+S WI+SEAAR+D+
Sbjct 125 VALGVRAQEAEAGNV-AWLTSMRRGWPYVIWKYAATLDGRSAAADGTSMWITSEAARIDV 183
Query 188 HRRRAIADAILVGTGTVLADDPALTAR-LADGSLAPQQPLRVVVGKRD-IPPEARVLNDE 245
H R DA+L G GTVL DDP LTAR L DG++A +QPLRVVV P +ARV +
Sbjct 184 HALRGTVDAVLAGVGTVLTDDPRLTARNLRDGTMAIRQPLRVVVDSSGRTPADARVRDGA 243
Query 246 ARTMMIRTHEPM----------EVLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAY 293
ART + E +L L R LLEGGPTLAGAFL AG ++RI+ Y
Sbjct 244 ARTWIATAAEVGAGPDGRVDLPALLAELHHRGVRAALLEGGPTLAGAFLAAGLVDRIVGY 303
Query 294 VAPILLGGPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VAP LLG TA+ D GVS I +A+ + V +VGPDL ++ + R
Sbjct 304 VAPKLLGAGPTALLDAGVSTIADAIDLEITDVTRVGPDLRITALPR 349
>gi|315503254|ref|YP_004082141.1| riboflavin biosynthesis protein ribd [Micromonospora sp. L5]
gi|315409873|gb|ADU07990.1| riboflavin biosynthesis protein RibD [Micromonospora sp. L5]
Length=353
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/346 (52%), Positives = 221/346 (64%), Gaps = 15/346 (4%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
S+DEAM AIE + + G T P P VG V++D +G +VG G AGG HAE+VAL +AG
Sbjct 5 SVDEAMRRAIELAARGLGATSPNPVVGCVLLDTDGEVVGEGFHAYAGGPHAEIVALAQAG 64
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPC+H G+T PC +ALI A V VV AV DPN +A GGA L AAG+Q
Sbjct 65 TRARGGTAVVTLEPCDHTGRTGPCSHALIAAGVSRVVIAVPDPNPVASGGAATLRAAGVQ 124
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V GV A++ AG + WL R G P+V WKYA ++DGRSAAADG+S WI+SEAAR+D+
Sbjct 125 VALGVRAQEAEAGNV-AWLTSMRRGWPYVIWKYAATLDGRSAAADGTSMWITSEAARIDV 183
Query 188 HRRRAIADAILVGTGTVLADDPALTAR-LADGSLAPQQPLRVVVGKRD-IPPEARVLNDE 245
H R DA+L G GTVL DDP LTAR L DG++A +QPLRVVV P +ARV +
Sbjct 184 HALRGTVDAVLAGVGTVLTDDPRLTARNLRDGTMAIRQPLRVVVDSSGRTPADARVRDGA 243
Query 246 ARTMMIRTHEPM----------EVLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAY 293
ART + E +L L R LLEGGPTLAGAFL AG ++RI+ Y
Sbjct 244 ARTWIATAAEVGAGPDGRVDLPALLAELHHRGVRAALLEGGPTLAGAFLAAGLVDRIVGY 303
Query 294 VAPILLGGPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VAP LLG TA+ D GVS I +A+ + V +VGPDL ++ + R
Sbjct 304 VAPKLLGAGPTALLDAGVSTIADAIDLEITDVTRVGPDLRITALPR 349
>gi|213965573|ref|ZP_03393767.1| riboflavin biosynthesis protein RibD [Corynebacterium amycolatum
SK46]
gi|213951732|gb|EEB63120.1| riboflavin biosynthesis protein RibD [Corynebacterium amycolatum
SK46]
Length=350
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 163/329 (50%), Positives = 210/329 (64%), Gaps = 8/329 (2%)
Query 11 EAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLA 70
+AM LAIE +V+GTTYP PP+G VI+D G VG GTEP GG HAE AL AG A
Sbjct 17 QAMALAIEAGQRVRGTTYPNPPIGCVILDTAGIAVGVAGTEPVGGRHAEPQALEMAGPRA 76
Query 71 AGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRS 130
G VVT+EPCNH G+TPPC AL A V V++AVADPN +A GG+ L G++V
Sbjct 77 QGGTAVVTLEPCNHIGRTPPCTEALAAAGVSRVIFAVADPNPVAAGGSEWLRYKGIEVVE 136
Query 131 GVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRR 190
+QVAAG LR WLH QRT PH+T K A ++DG +AA D +SQWI+ E AR +H
Sbjct 137 EFQRDQVAAGYLRPWLHWQRTRRPHITLKTAGTLDGFAAATDRTSQWITGEQARARVHAD 196
Query 191 RAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMM 250
RA AI+VGTGTVLAD+P LTAR DG QPLR+ +G ++ +A + D R
Sbjct 197 RARRQAIVVGTGTVLADNPRLTARTPDGEELSTQPLRIAIGTSEVAADANIRGDNFR--H 254
Query 251 IRTHEPMEVLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGG--PVTAV 306
IRTH+ L ++D DVL+EGGP LA AFL A A++ I +Y+AP LG PVT+
Sbjct 255 IRTHDVEVALETMADMGLIDVLVEGGPRLASAFLEADAVDAIESYIAPAFLGAGLPVTSA 314
Query 307 DDVGVSNITNALRWQFDSVEKVGPDLLLS 335
+ + IT+ R++ SVE +G D+L++
Sbjct 315 NH--ETTITDISRFRTASVETLGDDILIT 341
>gi|159037490|ref|YP_001536743.1| riboflavin biosynthesis protein RibD [Salinispora arenicola CNS-205]
gi|157916325|gb|ABV97752.1| riboflavin biosynthesis protein RibD [Salinispora arenicola CNS-205]
Length=353
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/347 (52%), Positives = 221/347 (64%), Gaps = 17/347 (4%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
S+DEAM A+E + + GTT P P VG V++DP GR+VG G AGG HAE+VAL +AG
Sbjct 5 SVDEAMRRAVELAARGLGTTSPNPVVGCVLLDPGGRVVGEGFHAYAGGPHAEIVALAQAG 64
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPC+H G+T PC AL++A + VV AV DPN A GGA L AAG++
Sbjct 65 ERARGGTAVVTLEPCDHTGRTGPCSTALVQAGIARVVIAVPDPNRAASGGAATLRAAGIR 124
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V GV A + AG + WL R G P+V WKYA ++DGRSAAADG+S WI+SE AR+D+
Sbjct 125 VDLGVRAAEAEAGNV-AWLTSTRRGWPYVIWKYAATLDGRSAAADGTSMWITSEVARMDV 183
Query 188 HRRRAIADAILVGTGTVLADDPALTAR-LADGSLAPQQPLRVVVGKRD-IPPEARVLNDE 245
H R DA+L G GTVLADDP LT R L DGSLA +QPLRVVV PP ARV +D
Sbjct 184 HALRGTVDAVLAGVGTVLADDPRLTVRNLRDGSLAIRQPLRVVVDSTGRTPPGARVRDDA 243
Query 246 ARTMMIRTHEPMEV-----------LRALSDR--TDVLLEGGPTLAGAFLRAGAINRILA 292
A T I T E + V L AL R L+EGGP LAGAFL AG +++I+
Sbjct 244 APT-WIATAEEVGVDPEGRVELAGLLAALHQRGVRAALVEGGPRLAGAFLAAGLVDKIVG 302
Query 293 YVAPILLGGPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
YVAP LLG A+ + GV+ IT A+ + V +VGPDL ++ + R
Sbjct 303 YVAPRLLGAGPAALTEAGVTTITEAIDCEVVDVTQVGPDLRITALPR 349
>gi|237785569|ref|YP_002906274.1| diaminohydroxyphosphoribosylaminopyrimidinedeaminase [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758481|gb|ACR17731.1| diaminohydroxyphosphoribosylaminopyrimidinedeaminase [Corynebacterium
kroppenstedtii DSM 44385]
Length=357
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/331 (50%), Positives = 217/331 (66%), Gaps = 3/331 (0%)
Query 6 VKSIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRR 65
V I+ AM A E ++ KGTT P PPVGAVI+D +GRIVG G T+PAGG HAEV+A+R
Sbjct 17 VSVIEHAMDRAAELGWEAKGTTSPNPPVGAVIIDADGRIVGQGHTQPAGGPHAEVMAVRD 76
Query 66 AGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAG 125
AG AGA +VT+EPC H G+T PC + L+ A + TVVYAV DPN IA GG L+ G
Sbjct 77 AGDATAGATAIVTLEPCAHTGRTGPCTDVLLSAGISTVVYAVPDPNPIAHGGHEVLAEKG 136
Query 126 LQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARL 185
L V G A++V G LR WLH+ TG VT K A ++DGR AA DG+SQWI+S AR
Sbjct 137 LTVIGGFHADEVRRGALRSWLHRIGTGRAMVTLKVAATLDGRVAAPDGTSQWITSADARN 196
Query 186 DLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDE 245
+HR RA DA++VGTGTV+AD+P LTAR DG+L QP V+VG R +P EA++
Sbjct 197 YVHRDRATRDALIVGTGTVIADNPRLTARKPDGTLYAHQPDHVIVGSRPVPEEAKIFA-H 255
Query 246 ARTMMIRTHEPMEVLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPV 303
AR+ TH+ V++ L+ + D+L+EGGP LA A L G +++I YVAP +LG +
Sbjct 256 ARSWHFDTHDLSHVIQELTQQGYVDLLIEGGPMLASAALEQGVVDQIHWYVAPSILGSGL 315
Query 304 TAVDDVGVSNITNALRWQFDSVEKVGPDLLL 334
A+ VS +T+ + + + ++GPDLL+
Sbjct 316 PAIQIPRVSTLTDRRDFTIEHITQLGPDLLV 346
>gi|145594417|ref|YP_001158714.1| riboflavin biosynthesis protein RibD [Salinispora tropica CNB-440]
gi|145303754|gb|ABP54336.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine
deaminase [Salinispora tropica
CNB-440]
Length=353
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 175/346 (51%), Positives = 220/346 (64%), Gaps = 15/346 (4%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
S+DEAM A++ + + GTT P P VG V++DP G++VG G AGG HAE+VAL AG
Sbjct 5 SVDEAMRRAVDLAARGLGTTSPNPVVGCVLLDPGGQVVGEGFHAYAGGPHAEIVALAHAG 64
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPC+H G+T PC AL++A V VV AV DPN A GGA L AAG++
Sbjct 65 ERARGGTAVVTLEPCDHTGRTGPCSTALVQAGVARVVIAVPDPNQAASGGAATLRAAGVR 124
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V GV A + AG + WL R G P++ WKYA ++DGRSAAADG+S WI+SEAAR+D+
Sbjct 125 VDLGVRAAEAEAGNI-AWLTSTRRGWPYLLWKYAATLDGRSAAADGTSMWITSEAARMDV 183
Query 188 HRRRAIADAILVGTGTVLADDPALTAR-LADGSLAPQQPLRVVVGKR-DIPPEARVLNDE 245
H R DA+L G GTVLADDP LT R L DGSLA +QPLRVVV P ARV +D
Sbjct 184 HALRGTVDAVLAGVGTVLADDPRLTVRNLRDGSLAIRQPLRVVVDSAGQTPAGARVRDDA 243
Query 246 ARTMMIRTHEPME----------VLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAY 293
A T + E +L AL R LLEGGP LAGAFL AG +++I+ Y
Sbjct 244 APTWIATADEVGTDSAGRVDLPALLAALHQRGVRAALLEGGPRLAGAFLAAGLVDKIVGY 303
Query 294 VAPILLGGPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VAP LLG TA+ D GV+ IT+A+ + V +VGPDL ++ + R
Sbjct 304 VAPRLLGAGPTALADAGVTTITDAIDCEVIDVTQVGPDLRITALPR 349
>gi|238063934|ref|ZP_04608643.1| riboflavin biosynthesis protein ribD [Micromonospora sp. ATCC
39149]
gi|237885745|gb|EEP74573.1| riboflavin biosynthesis protein ribD [Micromonospora sp. ATCC
39149]
Length=353
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 218/346 (64%), Gaps = 15/346 (4%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
S+D+AM AI + + GTT P P VG V++D +G +VG G AGG HAE+VAL +AG
Sbjct 5 SVDDAMRRAIALATRGLGTTSPNPVVGCVLLDADGEVVGEGFHAYAGGPHAEIVALAQAG 64
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPC+H G+ PC +ALI A V VV AV DPN +A GGA L A GL
Sbjct 65 RRARGGTAVVTLEPCDHTGRPGPCSHALIAAGVARVVIAVPDPNPVASGGAATLRAGGLD 124
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V GV A + AG + WL R G P+VTWKYA ++DGRSAAADG+S WI+SEAAR+D+
Sbjct 125 VEVGVRAAEAEAGNV-AWLTSMRRGWPYVTWKYAATLDGRSAAADGTSMWITSEAARIDV 183
Query 188 HRRRAIADAILVGTGTVLADDPALTAR-LADGSLAPQQPLRVVVGKRD-IPPEARVLNDE 245
H R DA++ G GTVLADDP LTAR L DG+LA +QPLRVVV P +ARV +
Sbjct 184 HALRGTVDAVIAGVGTVLADDPRLTARNLRDGTLAIRQPLRVVVDTFGRTPADARVRDGA 243
Query 246 ARTMMIRTHEPM----------EVLRALSDR--TDVLLEGGPTLAGAFLRAGAINRILAY 293
ART + E +L L R LLEGGP LAGAFL AG ++R++ Y
Sbjct 244 ARTWVATAAEVGAGPDGRVDLPALLAELHHRGVRAALLEGGPKLAGAFLAAGLVDRVVGY 303
Query 294 VAPILLGGPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
VAP LLG TA+ D GV+ I +A+ + V +VGPDL ++ + R
Sbjct 304 VAPKLLGAGPTALADAGVTTIADAIDLEITDVTQVGPDLRITALPR 349
>gi|326331206|ref|ZP_08197500.1| riboflavin biosynthesis protein RibD [Nocardioidaceae bacterium
Broad-1]
gi|325950976|gb|EGD43022.1| riboflavin biosynthesis protein RibD [Nocardioidaceae bacterium
Broad-1]
Length=352
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/306 (50%), Positives = 202/306 (67%), Gaps = 3/306 (0%)
Query 27 TYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAAGAIVVVTMEPCNHYG 86
TYP P VG V++ +G ++ G G HAEV AL +AG A GA VVT+EPCNH G
Sbjct 28 TYPNPRVGCVLLGADGSMIAEGYHRGPGTPHAEVDALAKAGEAARGATAVVTLEPCNHTG 87
Query 87 KTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLREWL 146
+T PC ALIEA V VVYA +DPN +A GGA L AG++V G+ A + A R W
Sbjct 88 RTGPCSQALIEAGVARVVYAQSDPNPVAAGGAATLKQAGVEVEQGLYAAE-ARELNRVWT 146
Query 147 HKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAILVGTGTVLA 206
P+VTWK+AT++DGRSAAADG+S+W+SS AARLD H+ RA++D +LVGT TV
Sbjct 147 RAAELQRPYVTWKFATTLDGRSAAADGTSRWVSSRAARLDTHKLRALSDTMLVGTNTVAV 206
Query 207 DDPALTARLADGSLAPQQPLRVVVGKRDIPPEARVLNDEARTMMIRTHEPMEVLRAL--S 264
DDPALT R + QPLRVV+G+RD+P + R+ + +A ++ +RT +P L AL
Sbjct 207 DDPALTVRDLEDRPVGVQPLRVVMGERDLPEDRRIFDAQAPSLHLRTRDPHSALAALWER 266
Query 265 DRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSNITNALRWQFDS 324
+R V LEGGPTLA AFL AG ++ I+ YVAP LLG +AV D+G++ I++A R + S
Sbjct 267 ERRHVFLEGGPTLAAAFLEAGLVDEIVVYVAPFLLGAGRSAVADLGIATISDAFRPRVRS 326
Query 325 VEKVGP 330
V+ + P
Sbjct 327 VDVLAP 332
>gi|330466988|ref|YP_004404731.1| riboflavin biosynthesis protein ribd [Verrucosispora maris AB-18-032]
gi|328809959|gb|AEB44131.1| riboflavin biosynthesis protein ribd [Verrucosispora maris AB-18-032]
Length=353
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/346 (49%), Positives = 218/346 (64%), Gaps = 15/346 (4%)
Query 8 SIDEAMGLAIEHSYQVKGTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAG 67
S+DEAM AIE + + GTT P P VG V++D +G +VG G AGG HAE+VAL +AG
Sbjct 5 SVDEAMRRAIELAARGLGTTSPNPVVGCVLLDADGEVVGEGFHAYAGGPHAEIVALAQAG 64
Query 68 GLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQ 127
A G VVT+EPC+H G+T PC +AL++A+V VV AV DP +A GGA L AAG++
Sbjct 65 HRAKGGTAVVTLEPCDHTGRTGPCSDALVQAQVARVVIAVPDPTPVAAGGAATLRAAGIR 124
Query 128 VRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDL 187
V GV A + G + WL R G P+V WKYA ++DGRSAAADG+S WI+SEAAR+D+
Sbjct 125 VDLGVRATEAENGNV-AWLTAMRRGWPYVIWKYAATLDGRSAAADGTSMWITSEAARMDV 183
Query 188 HRRRAIADAILVGTGTVLADDPALTAR-LADGSLAPQQPLRVVVGKRD-IPPEARVLNDE 245
H RA DA++VG GTVLADDP LT R L DGSLA +QPLRVVV P +A++ +
Sbjct 184 HALRATVDAVIVGVGTVLADDPRLTVRNLRDGSLAIRQPLRVVVDSAGRTPLDAQIRDAA 243
Query 246 ARTMMIRTHE------------PMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAY 293
ART + E + VLLEGGP LAGAFL AG ++R++ Y
Sbjct 244 ARTWIATAAEVGAGPDGGVDLPALLAALHAKGVRAVLLEGGPKLAGAFLAAGLVDRVVGY 303
Query 294 VAPILLGGPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR 339
+AP LLG A+ D GV+ I A+ + V ++GPDL ++ + R
Sbjct 304 LAPRLLGAGPAALVDAGVTTIAEAIDLEITDVTQIGPDLRITALPR 349
Lambda K H
0.317 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 614457248732
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40