BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1417 Length=154 Score E Sequences producing significant alignments: (Bits) Value gi|15608555|ref|NP_215933.1| hypothetical protein Rv1417 [Mycoba... 299 8e-80 gi|289761576|ref|ZP_06520954.1| conserved hypothetical protein [... 298 2e-79 gi|148822637|ref|YP_001287391.1| hypothetical protein TBFG_11446... 297 3e-79 gi|340626431|ref|YP_004744883.1| hypothetical protein MCAN_14331... 288 2e-76 gi|183982237|ref|YP_001850528.1| hypothetical protein MMAR_2224 ... 239 1e-61 gi|118617426|ref|YP_905758.1| hypothetical protein MUL_1811 [Myc... 238 2e-61 gi|240172790|ref|ZP_04751449.1| hypothetical protein MkanA1_2598... 234 3e-60 gi|342858710|ref|ZP_08715365.1| hypothetical protein MCOL_07531 ... 231 3e-59 gi|41407240|ref|NP_960076.1| hypothetical protein MAP1142 [Mycob... 229 9e-59 gi|118462862|ref|YP_882545.1| hypothetical protein MAV_3363 [Myc... 228 3e-58 gi|296170718|ref|ZP_06852292.1| conserved hypothetical protein [... 225 2e-57 gi|118468856|ref|YP_887390.1| hypothetical protein MSMEG_3074 [M... 200 8e-50 gi|15827212|ref|NP_301475.1| hypothetical protein ML0561 [Mycoba... 196 1e-48 gi|254822411|ref|ZP_05227412.1| hypothetical protein MintA_20931... 187 3e-46 gi|169629878|ref|YP_001703527.1| hypothetical protein MAB_2794c ... 187 6e-46 gi|120403680|ref|YP_953509.1| hypothetical protein Mvan_2696 [My... 186 1e-45 gi|108799359|ref|YP_639556.1| hypothetical protein Mmcs_2392 [My... 180 6e-44 gi|145224299|ref|YP_001134977.1| hypothetical protein Mflv_3717 ... 175 2e-42 gi|315444632|ref|YP_004077511.1| hypothetical protein Mspyr1_305... 173 7e-42 gi|333990923|ref|YP_004523537.1| hypothetical protein JDM601_228... 156 9e-37 gi|226366362|ref|YP_002784145.1| hypothetical protein ROP_69530 ... 139 1e-31 gi|229493650|ref|ZP_04387435.1| putative membrane protein [Rhodo... 139 1e-31 gi|226306511|ref|YP_002766471.1| hypothetical protein RER_30240 ... 137 4e-31 gi|54025568|ref|YP_119810.1| hypothetical protein nfa35980 [Noca... 135 3e-30 gi|333919551|ref|YP_004493132.1| hypothetical protein AS9A_1883 ... 132 2e-29 gi|111024122|ref|YP_707094.1| hypothetical protein RHA1_ro07172 ... 129 2e-28 gi|317508954|ref|ZP_07966587.1| collagen alpha-1(I) protein [Seg... 127 4e-28 gi|262202284|ref|YP_003273492.1| hypothetical protein Gbro_2357 ... 126 9e-28 gi|312139597|ref|YP_004006933.1| integral membrane protein [Rhod... 122 2e-26 gi|256379223|ref|YP_003102883.1| hypothetical protein Amir_5216 ... 120 9e-26 gi|296395029|ref|YP_003659913.1| hypothetical protein Srot_2648 ... 117 7e-25 gi|134098695|ref|YP_001104356.1| hypothetical protein SACE_2125 ... 115 3e-24 gi|302525891|ref|ZP_07278233.1| conserved hypothetical protein [... 114 4e-24 gi|326382176|ref|ZP_08203868.1| hypothetical protein SCNU_04491 ... 113 9e-24 gi|213965622|ref|ZP_03393816.1| conserved hypothetical protein [... 113 9e-24 gi|296140258|ref|YP_003647501.1| hypothetical protein Tpau_2559 ... 112 3e-23 gi|343924575|ref|ZP_08764123.1| hypothetical protein GOALK_017_0... 110 6e-23 gi|300784681|ref|YP_003764972.1| hypothetical protein AMED_2775 ... 109 1e-22 gi|258654271|ref|YP_003203427.1| hypothetical protein Namu_4149 ... 108 3e-22 gi|21914868|dbj|BAA20057.1| ribX [Corynebacterium ammoniagenes] 103 1e-20 gi|257055605|ref|YP_003133437.1| hypothetical protein Svir_15750... 102 2e-20 gi|38233901|ref|NP_939668.1| hypothetical protein DIP1315 [Coryn... 102 2e-20 gi|340794450|ref|YP_004759913.1| hypothetical protein CVAR_1488 ... 102 3e-20 gi|296117957|ref|ZP_06836540.1| putative membrane protein [Coryn... 101 3e-20 gi|300781128|ref|ZP_07090982.1| RibX protein [Corynebacterium ge... 98.2 3e-19 gi|227833019|ref|YP_002834726.1| hypothetical protein cauri_1195... 97.1 9e-19 gi|291300537|ref|YP_003511815.1| hypothetical protein Snas_3051 ... 95.5 2e-18 gi|336325641|ref|YP_004605607.1| hypothetical protein CRES_1087 ... 95.1 3e-18 gi|300858532|ref|YP_003783515.1| hypothetical protein cpfrc_0111... 93.6 9e-18 gi|68536083|ref|YP_250788.1| hypothetical protein jk1006 [Coryne... 93.6 1e-17 >gi|15608555|ref|NP_215933.1| hypothetical protein Rv1417 [Mycobacterium tuberculosis H37Rv] gi|15840874|ref|NP_335911.1| hypothetical protein MT1460 [Mycobacterium tuberculosis CDC1551] gi|31792611|ref|NP_855104.1| hypothetical protein Mb1452 [Mycobacterium bovis AF2122/97] 74 more sequence titles Length=154 Score = 299 bits (766), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 153/154 (99%), Positives = 154/154 (100%), Gaps = 0/154 (0%) Query 1 VTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 +TAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG Sbjct 1 MTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 Query 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI 120 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI Sbjct 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI 120 Query 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR 154 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR Sbjct 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR 154 >gi|289761576|ref|ZP_06520954.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709082|gb|EFD73098.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=154 Score = 298 bits (763), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 152/154 (99%), Positives = 154/154 (100%), Gaps = 0/154 (0%) Query 1 VTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 +TAAPNDWDVVLRPHWTPLFAYAAAFLIA+AHVAGGLLLKVGSSGVVFQTADQVAMGALG Sbjct 1 MTAAPNDWDVVLRPHWTPLFAYAAAFLIALAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 Query 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI 120 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI Sbjct 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI 120 Query 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR 154 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR Sbjct 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR 154 >gi|148822637|ref|YP_001287391.1| hypothetical protein TBFG_11446 [Mycobacterium tuberculosis F11] gi|148721164|gb|ABR05789.1| conserved membrane protein [Mycobacterium tuberculosis F11] Length=154 Score = 297 bits (761), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 152/154 (99%), Positives = 153/154 (99%), Gaps = 0/154 (0%) Query 1 VTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 +TAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG Sbjct 1 MTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 Query 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI 120 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGV FPGGSRWARIDLADDEYI Sbjct 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVQFPGGSRWARIDLADDEYI 120 Query 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR 154 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR Sbjct 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR 154 >gi|340626431|ref|YP_004744883.1| hypothetical protein MCAN_14331 [Mycobacterium canettii CIPT 140010059] gi|340004621|emb|CCC43765.1| putative conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=154 Score = 288 bits (737), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 149/154 (97%), Positives = 150/154 (98%), Gaps = 0/154 (0%) Query 1 VTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 +TAAPNDWDVVLRPHWTPLFAY AAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG Sbjct 1 MTAAPNDWDVVLRPHWTPLFAYVAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 Query 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI 120 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIV WSEVIGVSFPGGSRWARIDLADDEYI Sbjct 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVEWSEVIGVSFPGGSRWARIDLADDEYI 120 Query 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDLCAR 154 PVMAIQAVDKDRAVAAMDTVRSLLARYRPD AR Sbjct 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRPDPYAR 154 >gi|183982237|ref|YP_001850528.1| hypothetical protein MMAR_2224 [Mycobacterium marinum M] gi|183175563|gb|ACC40673.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=156 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 115/148 (78%), Positives = 132/148 (90%), Gaps = 0/148 (0%) Query 7 DWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGA 66 +WDVVLRP+WTP+ AY AA LI AHVAGGL LKVGSSG++FQT DQVAMGALGL+LAGA Sbjct 9 EWDVVLRPYWTPVVAYTAAILIVAAHVAGGLFLKVGSSGMIFQTGDQVAMGALGLILAGA 68 Query 67 VLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 VLLF RPRLR+G+AG+SVRNLLG +++ W +V+GVSFPGGSRWARIDL DDEYIPVMAIQ Sbjct 69 VLLFTRPRLRIGAAGISVRNLLGYKLIPWKDVVGVSFPGGSRWARIDLPDDEYIPVMAIQ 128 Query 127 AVDKDRAVAAMDTVRSLLARYRPDLCAR 154 AVDK+RAVA+MD VRSLL +YRPDL R Sbjct 129 AVDKERAVASMDAVRSLLTQYRPDLPTR 156 >gi|118617426|ref|YP_905758.1| hypothetical protein MUL_1811 [Mycobacterium ulcerans Agy99] gi|118569536|gb|ABL04287.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=156 Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 114/148 (78%), Positives = 132/148 (90%), Gaps = 0/148 (0%) Query 7 DWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGA 66 +W+VVLRP+WTP+ AY AA LI AHVAGGL LKVGSSG++FQT DQVAMGALGL+LAGA Sbjct 9 EWNVVLRPYWTPVVAYTAAILIVAAHVAGGLFLKVGSSGMIFQTGDQVAMGALGLILAGA 68 Query 67 VLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 VLLF RPRLR+G+AG+SVRNLLG +++ W +V+GVSFPGGSRWARIDL DDEYIPVMAIQ Sbjct 69 VLLFTRPRLRIGAAGISVRNLLGYKLIPWKDVVGVSFPGGSRWARIDLPDDEYIPVMAIQ 128 Query 127 AVDKDRAVAAMDTVRSLLARYRPDLCAR 154 AVDK+RAVA+MD VRSLL +YRPDL R Sbjct 129 AVDKERAVASMDAVRSLLTQYRPDLPTR 156 >gi|240172790|ref|ZP_04751449.1| hypothetical protein MkanA1_25982 [Mycobacterium kansasii ATCC 12478] Length=156 Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 116/151 (77%), Positives = 133/151 (89%), Gaps = 0/151 (0%) Query 3 AAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLV 62 A DWDVVLRP+WTP+FA AAFLI V HVA G+LLKVG++GVV +TADQVAMGALGL+ Sbjct 5 AQQGDWDVVLRPYWTPIFACVAAFLIVVVHVAVGMLLKVGTTGVVLRTADQVAMGALGLI 64 Query 63 LAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPV 122 AGAVLL RPRLRVG+AGLSVRN+LG +++ W++V+ VSFP GSRWARIDL DDEYIPV Sbjct 65 FAGAVLLLTRPRLRVGAAGLSVRNILGYKLIHWNDVVAVSFPSGSRWARIDLPDDEYIPV 124 Query 123 MAIQAVDKDRAVAAMDTVRSLLARYRPDLCA 153 MAIQAVDK+RAVAAMDTVR+LLARYRPDL A Sbjct 125 MAIQAVDKERAVAAMDTVRTLLARYRPDLRA 155 >gi|342858710|ref|ZP_08715365.1| hypothetical protein MCOL_07531 [Mycobacterium colombiense CECT 3035] gi|342134414|gb|EGT87594.1| hypothetical protein MCOL_07531 [Mycobacterium colombiense CECT 3035] Length=156 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 118/153 (78%), Positives = 132/153 (87%), Gaps = 2/153 (1%) Query 1 VTAAPN--DWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGA 58 +T+ P+ WD VLRPH TPLFAY AAFLIA AH+A GLLLKVGS+GVVFQT+DQVA+ Sbjct 1 MTSTPDRESWDAVLRPHRTPLFAYGAAFLIAAAHIAVGLLLKVGSTGVVFQTSDQVAIAV 60 Query 59 LGLVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDE 118 LGLV+AG VLLFARPRLRVG +G+SVRNLLGD+++ W +V GVSFP G RWARIDL DDE Sbjct 61 LGLVIAGVVLLFARPRLRVGPSGVSVRNLLGDKLIEWPDVAGVSFPVGHRWARIDLPDDE 120 Query 119 YIPVMAIQAVDKDRAVAAMDTVRSLLARYRPDL 151 YIPVMAIQAVDK RAV AMDTVRSLLARYRPDL Sbjct 121 YIPVMAIQAVDKGRAVDAMDTVRSLLARYRPDL 153 >gi|41407240|ref|NP_960076.1| hypothetical protein MAP1142 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254775809|ref|ZP_05217325.1| hypothetical protein MaviaA2_14225 [Mycobacterium avium subsp. avium ATCC 25291] gi|41395591|gb|AAS03459.1| hypothetical protein MAP_1142 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461613|gb|EGO40478.1| Protein of unknown function (DUF2581) [Mycobacterium avium subsp. paratuberculosis S397] Length=154 Score = 229 bits (585), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 115/147 (79%), Positives = 128/147 (88%), Gaps = 0/147 (0%) Query 5 PNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLA 64 P WDVVLRPH TPLF Y AA LIA AH+A GLLLKVGS+GVVF+T+DQVA+ LGLV+A Sbjct 6 PERWDVVLRPHRTPLFVYGAAVLIAAAHIALGLLLKVGSTGVVFRTSDQVAIAVLGLVIA 65 Query 65 GAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMA 124 G VLLFARPRLR+G AG+SVRNLLGD+++ W +V+GVSFP G RWARIDL DDEYIPVMA Sbjct 66 GVVLLFARPRLRIGPAGVSVRNLLGDKLIEWPDVVGVSFPVGHRWARIDLPDDEYIPVMA 125 Query 125 IQAVDKDRAVAAMDTVRSLLARYRPDL 151 IQAVDK RAV AMDTVRSLLARYRPDL Sbjct 126 IQAVDKGRAVDAMDTVRSLLARYRPDL 152 >gi|118462862|ref|YP_882545.1| hypothetical protein MAV_3363 [Mycobacterium avium 104] gi|118164149|gb|ABK65046.1| conserved hypothetical protein [Mycobacterium avium 104] Length=154 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 114/147 (78%), Positives = 127/147 (87%), Gaps = 0/147 (0%) Query 5 PNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLA 64 P WDVVLRPH TPLF Y AA LIA AH+ GLLLKVGS+GVVF+T+DQVA+ LGLV+A Sbjct 6 PERWDVVLRPHRTPLFVYGAAVLIAAAHIVLGLLLKVGSTGVVFRTSDQVAIAVLGLVIA 65 Query 65 GAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMA 124 G VLLFARPRLR+G AG+SVRNLLGD+++ W +V+GVSFP G RWARIDL DDEYIPVMA Sbjct 66 GVVLLFARPRLRIGPAGVSVRNLLGDKLIEWPDVVGVSFPVGHRWARIDLPDDEYIPVMA 125 Query 125 IQAVDKDRAVAAMDTVRSLLARYRPDL 151 IQAVDK RAV AMDTVRSLLARYRPDL Sbjct 126 IQAVDKGRAVDAMDTVRSLLARYRPDL 152 >gi|296170718|ref|ZP_06852292.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894622|gb|EFG74357.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=153 Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 112/147 (77%), Positives = 128/147 (88%), Gaps = 0/147 (0%) Query 8 WDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAV 67 WDV LRPH T +F Y AAF+IA H+A G LLKVGS+GVVFQT+DQVAM LGLVLAG V Sbjct 7 WDVELRPHRTTIFVYGAAFVIAAVHIAIGFLLKVGSTGVVFQTSDQVAMVLLGLVLAGVV 66 Query 68 LLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQA 127 LLFARPRLR+G+AG+SVRNLLGD+++ W +V GVSFP G+RWARIDL DDEYIPVMAIQA Sbjct 67 LLFARPRLRIGAAGISVRNLLGDKLIAWPDVAGVSFPVGNRWARIDLPDDEYIPVMAIQA 126 Query 128 VDKDRAVAAMDTVRSLLARYRPDLCAR 154 VDK+RAV AM+TVRSLLARYRPDL +R Sbjct 127 VDKERAVDAMETVRSLLARYRPDLPSR 153 >gi|118468856|ref|YP_887390.1| hypothetical protein MSMEG_3074 [Mycobacterium smegmatis str. MC2 155] gi|118170143|gb|ABK71039.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=157 Score = 200 bits (508), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 96/150 (64%), Positives = 122/150 (82%), Gaps = 0/150 (0%) Query 4 APNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVL 63 A WDV +RP+ TP+FAY AA +I AHV G LLKVGS+GVVF+T DQVA+ LG V+ Sbjct 8 ADETWDVQIRPYRTPIFAYGAALIIFAAHVVVGALLKVGSTGVVFRTEDQVAIALLGAVI 67 Query 64 AGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVM 123 A AVL+FARPRLR+G +G++VRN+LG +++ WS+V+G+SFP G+RWARIDL DDEY+ VM Sbjct 68 ACAVLMFARPRLRIGPSGMAVRNILGYKLIPWSDVVGLSFPVGARWARIDLPDDEYVAVM 127 Query 124 AIQAVDKDRAVAAMDTVRSLLARYRPDLCA 153 AIQA+D+DRAV +MD R L+ARYRPDL A Sbjct 128 AIQAIDRDRAVESMDRARELVARYRPDLAA 157 >gi|15827212|ref|NP_301475.1| hypothetical protein ML0561 [Mycobacterium leprae TN] gi|221229690|ref|YP_002503106.1| hypothetical protein MLBr_00561 [Mycobacterium leprae Br4923] gi|13092760|emb|CAC30069.1| putative membrane protein [Mycobacterium leprae] gi|219932797|emb|CAR70654.1| putative membrane protein [Mycobacterium leprae Br4923] Length=156 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 108/143 (76%), Positives = 124/143 (87%), Gaps = 0/143 (0%) Query 6 NDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG 65 +DWDV LRP+WTPLFAYAAAFLIA AH+ GLLL++ SSGVVF+TADQVA+GALGLV+A Sbjct 8 DDWDVELRPYWTPLFAYAAAFLIAAAHITVGLLLRIKSSGVVFRTADQVAIGALGLVIAS 67 Query 66 AVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAI 125 AVLL RPRLRVG+AGL VRN++ RI+ WS V+ VSFP GS WARIDL DDEYIP+MAI Sbjct 68 AVLLLTRPRLRVGAAGLLVRNIMFYRIIPWSHVVDVSFPLGSHWARIDLPDDEYIPLMAI 127 Query 126 QAVDKDRAVAAMDTVRSLLARYR 148 QAVDK+RAV AMD VR+LLARYR Sbjct 128 QAVDKERAVEAMDAVRALLARYR 150 >gi|254822411|ref|ZP_05227412.1| hypothetical protein MintA_20931 [Mycobacterium intracellulare ATCC 13950] Length=129 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 96/128 (75%), Positives = 108/128 (85%), Gaps = 0/128 (0%) Query 26 FLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLLFARPRLRVGSAGLSVR 85 LIA AH+ GLLLK S+GVVFQTADQVA+ LGLV+AG VLLFARPRLRVG +G+SVR Sbjct 1 MLIAGAHIVVGLLLKARSTGVVFQTADQVAIAVLGLVIAGIVLLFARPRLRVGPSGVSVR 60 Query 86 NLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTVRSLLA 145 NLLGD+++ W +V+ VSFP G RWARIDL DDEYIPVMAIQAVDK RAV AMDTVR+LL Sbjct 61 NLLGDKLIEWPDVVDVSFPVGHRWARIDLPDDEYIPVMAIQAVDKGRAVEAMDTVRALLT 120 Query 146 RYRPDLCA 153 RYRPDL A Sbjct 121 RYRPDLPA 128 >gi|169629878|ref|YP_001703527.1| hypothetical protein MAB_2794c [Mycobacterium abscessus ATCC 19977] gi|169241845|emb|CAM62873.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=150 Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 86/145 (60%), Positives = 115/145 (80%), Gaps = 0/145 (0%) Query 4 APNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVL 63 A +WDVVL+PH +P F Y AA +IA AH+A G LLK+ SGV+F+T+DQV + +G+V+ Sbjct 5 AEAEWDVVLKPHLSPYFVYGAALVIAAAHIAVGFLLKISPSGVIFKTSDQVGIALVGIVI 64 Query 64 AGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVM 123 A VL+FARPR+R GSAG+ VRN+LG +++ WSEV+GVSFP G++WAR+DL D EY P+M Sbjct 65 ACVVLMFARPRVRAGSAGIEVRNVLGPKLIPWSEVVGVSFPPGAQWARLDLEDFEYEPMM 124 Query 124 AIQAVDKDRAVAAMDTVRSLLARYR 148 AIQA+DK RAV AMD +R +L +YR Sbjct 125 AIQAIDKQRAVDAMDALREVLGKYR 149 >gi|120403680|ref|YP_953509.1| hypothetical protein Mvan_2696 [Mycobacterium vanbaalenii PYR-1] gi|119956498|gb|ABM13503.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=154 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 96/145 (67%), Positives = 113/145 (78%), Gaps = 0/145 (0%) Query 6 NDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG 65 NDWD+ +RPH TP FAY AA LI AHV G LLKVGSSGVVF+T DQVA+ +G+V+A Sbjct 4 NDWDIEVRPHLTPYFAYGAAALIVAAHVIVGALLKVGSSGVVFRTWDQVAIAMVGVVIAC 63 Query 66 AVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAI 125 V LFARPRLRVG +G++VRNL G R+ W +VI VSF G+ WAR+DL DDEY+PVMAI Sbjct 64 FVSLFARPRLRVGPSGVAVRNLFGYRLFPWDQVIDVSFHKGACWARLDLPDDEYVPVMAI 123 Query 126 QAVDKDRAVAAMDTVRSLLARYRPD 150 QAVDK RAV AMD VR+LL RY+ D Sbjct 124 QAVDKRRAVEAMDRVRALLRRYQAD 148 >gi|108799359|ref|YP_639556.1| hypothetical protein Mmcs_2392 [Mycobacterium sp. MCS] gi|119868475|ref|YP_938427.1| hypothetical protein Mkms_2439 [Mycobacterium sp. KMS] gi|126435017|ref|YP_001070708.1| hypothetical protein Mjls_2433 [Mycobacterium sp. JLS] gi|108769778|gb|ABG08500.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119694564|gb|ABL91637.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126234817|gb|ABN98217.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=148 Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 95/143 (67%), Positives = 119/143 (84%), Gaps = 0/143 (0%) Query 6 NDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG 65 +DW+VV+RPH TP FAYAAA +I AHVA G LLK+GSSGV+FQTADQVA+ LG+++ G Sbjct 2 SDWEVVIRPHLTPYFAYAAAAVIVAAHVAVGFLLKIGSSGVIFQTADQVAIALLGVIIGG 61 Query 66 AVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAI 125 V LFARPR+RVG GL+VRNL +R++ W +++GVSFP G+RWAR+DL DDEYIP+MAI Sbjct 62 VVTLFARPRVRVGPRGLAVRNLWAERVLEWPDIVGVSFPRGARWARVDLPDDEYIPLMAI 121 Query 126 QAVDKDRAVAAMDTVRSLLARYR 148 QAVDK+RAV AM+ +R LARYR Sbjct 122 QAVDKERAVEAMEQLRDALARYR 144 >gi|145224299|ref|YP_001134977.1| hypothetical protein Mflv_3717 [Mycobacterium gilvum PYR-GCK] gi|145216785|gb|ABP46189.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=157 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/148 (65%), Positives = 121/148 (82%), Gaps = 0/148 (0%) Query 7 DWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGA 66 DWD+ ++PH TP+FA+ AA +I VAHVA G LLKVGSSGVVF+TADQVA+ +G+V+A Sbjct 4 DWDLEVKPHLTPIFAWGAAVIIVVAHVAVGALLKVGSSGVVFRTADQVAIALVGVVIACF 63 Query 67 VLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 V LFARPRLRVG +G++VRNL G R+ W+EV+ VSF G+RWAR+DL DDEY+PVMAIQ Sbjct 64 VTLFARPRLRVGPSGVAVRNLFGYRLFPWTEVVDVSFHEGARWARLDLPDDEYVPVMAIQ 123 Query 127 AVDKDRAVAAMDTVRSLLARYRPDLCAR 154 AVDK RAV +MDTVR+L+ RY D+ ++ Sbjct 124 AVDKGRAVESMDTVRALITRYLDDVNSQ 151 >gi|315444632|ref|YP_004077511.1| hypothetical protein Mspyr1_30590 [Mycobacterium sp. Spyr1] gi|315262935|gb|ADT99676.1| Protein of unknown function (DUF2581) [Mycobacterium sp. Spyr1] Length=157 Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 94/148 (64%), Positives = 120/148 (82%), Gaps = 0/148 (0%) Query 7 DWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGA 66 DWD+ ++PH TP+FA+ AA +I VAHVA G LLKVGSSGVVF+TADQVA+ +G+V+A Sbjct 4 DWDLEVKPHLTPIFAWGAAVIIVVAHVAVGALLKVGSSGVVFRTADQVAIALVGVVIACF 63 Query 67 VLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 V LFARPRLRVG +G++VRNL G R+ W+EV+ VSF G+RWAR+DL DDEY+PVMAIQ Sbjct 64 VTLFARPRLRVGPSGVAVRNLFGYRLFPWTEVVDVSFHEGARWARLDLPDDEYVPVMAIQ 123 Query 127 AVDKDRAVAAMDTVRSLLARYRPDLCAR 154 AVDK AV +MDTVR+L+ RY D+ ++ Sbjct 124 AVDKGHAVESMDTVRALITRYLDDVNSQ 151 >gi|333990923|ref|YP_004523537.1| hypothetical protein JDM601_2283 [Mycobacterium sp. JDM601] gi|333486891|gb|AEF36283.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=164 Score = 156 bits (395), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 76/143 (54%), Positives = 108/143 (76%), Gaps = 0/143 (0%) Query 7 DWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGA 66 WD+ +RP + ++AA LI HV LL + SSGV+F+T D+VA+ LG+++AG+ Sbjct 9 QWDLEVRPRLMRIGLWSAAILIVAIHVVVSFLLTIRSSGVIFRTYDRVAVVVLGIIVAGS 68 Query 67 VLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 +L++ R R+R G +G+SVRN LGDR++ WS+V+GVSFP G RWAR++L DDEYIP++AIQ Sbjct 69 LLVWTRARVRAGESGVSVRNGLGDRLIPWSDVLGVSFPPGKRWARLELPDDEYIPLVAIQ 128 Query 127 AVDKDRAVAAMDTVRSLLARYRP 149 + DK+ AV AM T+R L+ARYRP Sbjct 129 SADKEAAVEAMRTLRILVARYRP 151 >gi|226366362|ref|YP_002784145.1| hypothetical protein ROP_69530 [Rhodococcus opacus B4] gi|226244852|dbj|BAH55200.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=150 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/149 (47%), Positives = 100/149 (68%), Gaps = 0/149 (0%) Query 1 VTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 +T ++W +V +P + +A A L+ V HV +LL+ S+GV F+ ADQ+A +G Sbjct 1 MTTPESEWTLVAKPRKSRRYAIGVAILLVVVHVTFAILLRGDSTGVYFRLADQLAFAGIG 60 Query 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI 120 + A AVLL RPR+R+G G++VRN+LG+RIV W G+SFP G+ WARI+L DDEY+ Sbjct 61 CLFAAAVLLLTRPRVRIGPRGIAVRNVLGERIVDWDLYEGLSFPDGAAWARIELPDDEYL 120 Query 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRP 149 VMAIQ+ D++ AV A+D R+L + Y P Sbjct 121 AVMAIQSNDREYAVDAVDRFRALASEYAP 149 >gi|229493650|ref|ZP_04387435.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229319611|gb|EEN85447.1| putative membrane protein [Rhodococcus erythropolis SK121] Length=157 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/144 (46%), Positives = 96/144 (67%), Gaps = 0/144 (0%) Query 6 NDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG 65 +W+++ P + +A A L+ + HV LLL+ GS+GV F+ ADQ+AM +G +LA Sbjct 8 ENWELIASPRKSTRYAIGVAVLLVIVHVTLALLLRQGSTGVYFRAADQIAMAGIGTILAL 67 Query 66 AVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAI 125 VL+ RPR++VG G++VRN+LG++IV W G+SFP G+ WARI+L DDEY+ VMAI Sbjct 68 GVLMLTRPRVKVGKQGIAVRNILGEKIVDWDLFEGLSFPDGAAWARIELPDDEYMAVMAI 127 Query 126 QAVDKDRAVAAMDTVRSLLARYRP 149 Q+ D++ AV + R L RY P Sbjct 128 QSNDREYAVDTVGKFRELADRYAP 151 >gi|226306511|ref|YP_002766471.1| hypothetical protein RER_30240 [Rhodococcus erythropolis PR4] gi|226185628|dbj|BAH33732.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=157 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/144 (46%), Positives = 96/144 (67%), Gaps = 0/144 (0%) Query 6 NDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG 65 +W+++ P + +A A L+ + HV LLL+ GS+GV F+ ADQ+AM +G +LA Sbjct 8 ENWELMASPRKSTRYAIGVAVLLVIVHVTLALLLRQGSTGVYFRAADQLAMAGIGTILAL 67 Query 66 AVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAI 125 VL+ RPR++VG G++VRN+LG++IV W G+SFP G+ WARI+L DDEY+ VMAI Sbjct 68 GVLMLTRPRVKVGKQGIAVRNILGEKIVDWDLFEGLSFPDGAAWARIELPDDEYMAVMAI 127 Query 126 QAVDKDRAVAAMDTVRSLLARYRP 149 Q+ D++ AV + R L RY P Sbjct 128 QSNDREYAVDTVGKFRELADRYAP 151 >gi|54025568|ref|YP_119810.1| hypothetical protein nfa35980 [Nocardia farcinica IFM 10152] gi|54017076|dbj|BAD58446.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=170 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/148 (45%), Positives = 97/148 (66%), Gaps = 0/148 (0%) Query 3 AAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLV 62 AA W+ +RP A+ A LI GG+ L+ GS+GV F+ ADQ+AM +G + Sbjct 17 AAGQRWEFEVRPRRAVRTAWIVAVLILAVFTVGGVFLRNGSTGVHFRLADQIAMIVVGAL 76 Query 63 LAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPV 122 +AG VLL RPR+R G+ G++VRN+LG+ + GW + GVSFP WAR++L DD+Y+P+ Sbjct 77 VAGGVLLLTRPRVRAGAEGVAVRNVLGENLFGWEHIRGVSFPDRKSWARLELVDDDYVPL 136 Query 123 MAIQAVDKDRAVAAMDTVRSLLARYRPD 150 +AI++ DK+ A AM+ +R L RY P+ Sbjct 137 LAIRSNDKEHAARAMERLRELGGRYAPE 164 >gi|333919551|ref|YP_004493132.1| hypothetical protein AS9A_1883 [Amycolicicoccus subflavus DQS3-9A1] gi|333481772|gb|AEF40332.1| hypothetical protein AS9A_1883 [Amycolicicoccus subflavus DQS3-9A1] Length=155 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/147 (48%), Positives = 94/147 (64%), Gaps = 0/147 (0%) Query 1 VTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 +TA +W++V+R P +A AA + + V G+LL ++GV F+ ADQ+AM LG Sbjct 1 MTAKTGEWELVVRARKMPKWAAVAALSMFLTFVVLGILLGSANTGVYFRLADQIAMVLLG 60 Query 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI 120 G LL ARPRLRVG AG+ VRN +R++ W V G+SF G WAR++L +DEYI Sbjct 61 AFFGGLFLLLARPRLRVGRAGVGVRNFFSERLIPWEIVDGLSFRSGGSWARLELPEDEYI 120 Query 121 PVMAIQAVDKDRAVAAMDTVRSLLARY 147 PV+AIQA D AVAA++ R L ARY Sbjct 121 PVLAIQAKDGRHAVAAVEKYRDLEARY 147 >gi|111024122|ref|YP_707094.1| hypothetical protein RHA1_ro07172 [Rhodococcus jostii RHA1] gi|110823652|gb|ABG98936.1| possible membrane protein [Rhodococcus jostii RHA1] Length=150 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/149 (49%), Positives = 100/149 (68%), Gaps = 0/149 (0%) Query 1 VTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALG 60 +T ++W +V P + +A A L+ V HV +LL+ S+GV F+ ADQ+A +G Sbjct 1 MTTPESEWTLVATPRKSRRYAIGVAILLVVVHVTFAILLRGDSTGVYFRLADQLAFAGIG 60 Query 61 LVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYI 120 +LA AVLL RPRLRVG G++VRN+LG+RIV W G+SFP G+ WARI+L DDEY+ Sbjct 61 CLLAAAVLLLTRPRLRVGPRGIAVRNVLGERIVDWDLYEGLSFPDGAAWARIELPDDEYL 120 Query 121 PVMAIQAVDKDRAVAAMDTVRSLLARYRP 149 VMAIQ+ D++ AV A+D R+L + Y P Sbjct 121 AVMAIQSNDREYAVDAVDRFRALASEYAP 149 >gi|317508954|ref|ZP_07966587.1| collagen alpha-1(I) protein [Segniliparus rugosus ATCC BAA-974] gi|316252719|gb|EFV12156.1| collagen alpha-1(I) protein [Segniliparus rugosus ATCC BAA-974] Length=150 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/137 (46%), Positives = 92/137 (68%), Gaps = 3/137 (2%) Query 10 VVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLL 69 +V+RP +A+ AA + H G+LL++ +GV F+ +DQVAM LGL+ AG LL Sbjct 7 LVIRPRKMRWYAWGAAVALLAIHTTVGVLLRIAETGVYFRISDQVAMILLGLIFAGLALL 66 Query 70 FARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVD 129 F RPR+RV GL VRNL +++V W +V+ +SFP S WAR+D+ DDE++P+MAI A+D Sbjct 67 FTRPRVRVLGEGLGVRNLFAEKLVPWDQVVSISFPESSPWARVDIPDDEFVPIMAISAMD 126 Query 130 KDRAVAAMDTVRSLLAR 146 AV D++R+L A+ Sbjct 127 GQHAV---DSIRALRAQ 140 >gi|262202284|ref|YP_003273492.1| hypothetical protein Gbro_2357 [Gordonia bronchialis DSM 43247] gi|262085631|gb|ACY21599.1| Protein of unknown function DUF2581 [Gordonia bronchialis DSM 43247] Length=161 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 66/142 (47%), Positives = 98/142 (70%), Gaps = 1/142 (0%) Query 8 WDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGV-VFQTADQVAMGALGLVLAGA 66 WD+V RPH P++A AAA ++ + H+ G+LL + +G T+DQ A+ +G+V+ GA Sbjct 13 WDLVYRPHRMPMYAVAAAVVVLIIHIVFGVLLTISDTGPRNIGTSDQAAIVIIGVVICGA 72 Query 67 VLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 +LLF RPRLRVG AG++VRNL +R+ W V+G+++P A+++L DE++PV+A+Q Sbjct 73 ILLFTRPRLRVGPAGVAVRNLATERVFDWDTVVGLTYPDRGFGAQLELPADEHVPVLAVQ 132 Query 127 AVDKDRAVAAMDTVRSLLARYR 148 A D DRAV AM+ R L RYR Sbjct 133 AGDGDRAVEAMNRYRELEERYR 154 >gi|312139597|ref|YP_004006933.1| integral membrane protein [Rhodococcus equi 103S] gi|325676728|ref|ZP_08156402.1| hypothetical protein HMPREF0724_14185 [Rhodococcus equi ATCC 33707] gi|311888936|emb|CBH48249.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325552510|gb|EGD22198.1| hypothetical protein HMPREF0724_14185 [Rhodococcus equi ATCC 33707] Length=152 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/141 (50%), Positives = 96/141 (69%), Gaps = 0/141 (0%) Query 7 DWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGA 66 DW+ +R + +A AA ++ + HV +LL+ ++GV F+ DQ AM +GL+LAG Sbjct 6 DWEFEVRSKKSARYAMVAAGVLVLVHVTLAILLRTSATGVYFRLVDQFAMAGIGLLLAGG 65 Query 67 VLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 VLL RPRLRVG G++VRN+LG+RIV W G+SF G+ WARI+L DDEY+PVMAIQ Sbjct 66 VLLLTRPRLRVGPRGIAVRNILGERIVDWDLDQGLSFRDGASWARIELPDDEYVPVMAIQ 125 Query 127 AVDKDRAVAAMDTVRSLLARY 147 A D++ AV A+ R L A+Y Sbjct 126 ANDREHAVQAVRRFRELEAKY 146 >gi|256379223|ref|YP_003102883.1| hypothetical protein Amir_5216 [Actinosynnema mirum DSM 43827] gi|255923526|gb|ACU39037.1| hypothetical protein Amir_5216 [Actinosynnema mirum DSM 43827] Length=158 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 64/134 (48%), Positives = 90/134 (68%), Gaps = 0/134 (0%) Query 10 VVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLL 69 V RP AYA+A L+ V G LL +GV+F+T+DQ+AM LG+VLAGAVLL Sbjct 19 VQFRPKKIRTVAYASAALLVVVFAVVGWLLGDTPTGVIFRTSDQIAMALLGVVLAGAVLL 78 Query 70 FARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVD 129 ARPR+R + G+ VRN + W++V+ VSFP G+ WAR++ +DEY+ +MA+QAVD Sbjct 79 LARPRVRADAEGVEVRNPVTSYKFAWADVLKVSFPDGAPWARLEFPEDEYVSIMAVQAVD 138 Query 130 KDRAVAAMDTVRSL 143 ++ AVAA+ +R L Sbjct 139 REHAVAAVRALREL 152 >gi|296395029|ref|YP_003659913.1| hypothetical protein Srot_2648 [Segniliparus rotundus DSM 44985] gi|296182176|gb|ADG99082.1| Protein of unknown function DUF2581 [Segniliparus rotundus DSM 44985] Length=152 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 57/110 (52%), Positives = 79/110 (72%), Gaps = 3/110 (2%) Query 36 GLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGW 95 G+LL++ +GV F+ +DQVA+ LGL+ AG LLF RPR+RV AGL VRNL + +V W Sbjct 35 GVLLRISETGVYFRISDQVALVVLGLIFAGLALLFIRPRVRVLDAGLGVRNLFAETLVPW 94 Query 96 SEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTVRSLLA 145 V+ +SFP S WAR+D+ DDEY+P+MA+ A+D R A+D++RSL A Sbjct 95 DHVLAISFPETSSWARVDVPDDEYVPMMALSAMDGQR---ALDSIRSLRA 141 >gi|134098695|ref|YP_001104356.1| hypothetical protein SACE_2125 [Saccharopolyspora erythraea NRRL 2338] gi|291003618|ref|ZP_06561591.1| hypothetical protein SeryN2_03772 [Saccharopolyspora erythraea NRRL 2338] gi|133911318|emb|CAM01431.1| possible membrane protein [Saccharopolyspora erythraea NRRL 2338] Length=151 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/102 (54%), Positives = 72/102 (71%), Gaps = 0/102 (0%) Query 36 GLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGW 95 G LL+ +GV FQ +DQV+M LGL+LA V+L RPR+R SAG+ VRN++G + W Sbjct 35 GTLLRNTPTGVTFQVSDQVSMAVLGLLLAAGVMLLTRPRMRADSAGIEVRNIIGTQRYRW 94 Query 96 SEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAM 137 V VSFP G+ WAR++L +DEY+P+MAIQA D AVAAM Sbjct 95 ELVQAVSFPDGAPWARLELPEDEYVPIMAIQATDGAHAVAAM 136 >gi|302525891|ref|ZP_07278233.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302434786|gb|EFL06602.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=151 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/134 (42%), Positives = 84/134 (63%), Gaps = 0/134 (0%) Query 10 VVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLL 69 +V+RP + A + A V +LL+ +GVVF+ +DQ+AM +G+ L+ +L Sbjct 11 LVIRPRRALIMCSVLAVALLAAFVVVAVLLRSSHTGVVFEASDQIAMIGIGVALSAGTML 70 Query 70 FARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVD 129 F R+R + G+ VRN+L R W +V+ +SFP G+ WAR++L DDEY VMA+QAVD Sbjct 71 FGNARVRADATGIEVRNVLARRAFTWDQVLSISFPDGASWARLELPDDEYFSVMAVQAVD 130 Query 130 KDRAVAAMDTVRSL 143 ++RAV A+ +R L Sbjct 131 RERAVTAVRALRKL 144 >gi|326382176|ref|ZP_08203868.1| hypothetical protein SCNU_04491 [Gordonia neofelifaecis NRRL B-59395] gi|326198906|gb|EGD56088.1| hypothetical protein SCNU_04491 [Gordonia neofelifaecis NRRL B-59395] Length=162 Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 55/143 (39%), Positives = 85/143 (60%), Gaps = 0/143 (0%) Query 5 PNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLA 64 P DW+ V RP W + A+ A ++ H+ GLLL V +GV + +D+ A+ +G++++ Sbjct 13 PQDWEYVYRPRWMRIAAWVAVGVVMAIHLTFGLLLDVSYTGVNVEWSDKFALIGVGVLIS 72 Query 65 GAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMA 124 +L R RLR+G +G+ V NL+ +R+ W EV+G+ +P AR+ DE+IPVMA Sbjct 73 CVILFLTRARLRLGPSGVGVLNLVSERVFAWDEVLGMEYPEKGFCARLLFPGDEHIPVMA 132 Query 125 IQAVDKDRAVAAMDTVRSLLARY 147 +QA D D AV AM R +Y Sbjct 133 VQARDGDLAVEAMSRFREFQQKY 155 >gi|213965622|ref|ZP_03393816.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213951781|gb|EEB63169.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=164 Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 53/149 (36%), Positives = 90/149 (61%), Gaps = 0/149 (0%) Query 2 TAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGL 61 T + + W + + L+A AA ++ H+ G+++ G++G T DQ+A +GL Sbjct 15 TGSEDQWLLEITSQKLRLWAIIAAVVVFAIHIFMGIVVDFGNTGASVTTIDQLAFPTIGL 74 Query 62 VLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIP 121 ++AG +LL R R+RV + G+ VRNLL ++ W ++ G+SFP SRWAR++L D E++P Sbjct 75 IIAGVILLLTRARVRVNARGVEVRNLLNEKFYPWVDIYGLSFPKKSRWARLELPDFEFVP 134 Query 122 VMAIQAVDKDRAVAAMDTVRSLLARYRPD 150 ++AIQ+ D R V + R L ++ P+ Sbjct 135 MLAIQSADGSRVVEDIRRFRELEDKFMPE 163 >gi|296140258|ref|YP_003647501.1| hypothetical protein Tpau_2559 [Tsukamurella paurometabola DSM 20162] gi|296028392|gb|ADG79162.1| Protein of unknown function DUF2581 [Tsukamurella paurometabola DSM 20162] Length=151 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/136 (45%), Positives = 83/136 (62%), Gaps = 1/136 (0%) Query 13 RPHWTPLFAYAAAFLIAVAHVAGGLLLKVG-SSGVVFQTADQVAMGALGLVLAGAVLLFA 71 RP ++A+ A ++ V H G LL G +G +F+ D+V M +GL+LAG LLF Sbjct 13 RPRKIKVYAWTIAIVLIVGHGTVGFLLTTGGDTGPLFRPDDKVGMALIGLILAGGALLFT 72 Query 72 RPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKD 131 RPRLR+G G+SVRNLL + W V G+SFP GS +AR+DL DE++ + AIQA D + Sbjct 73 RPRLRIGPDGVSVRNLLNENTYPWDLVRGISFPDGSAFARLDLPQDEFVAIWAIQARDGE 132 Query 132 RAVAAMDTVRSLLARY 147 AV A R L+ Y Sbjct 133 YAVQASARARELVDIY 148 >gi|343924575|ref|ZP_08764123.1| hypothetical protein GOALK_017_00330 [Gordonia alkanivorans NBRC 16433] gi|343765510|dbj|GAA11049.1| hypothetical protein GOALK_017_00330 [Gordonia alkanivorans NBRC 16433] Length=154 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 60/142 (43%), Positives = 87/142 (62%), Gaps = 1/142 (0%) Query 8 WDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGV-VFQTADQVAMGALGLVLAGA 66 WD+V RP P +A AA ++ H+ GLLL + GV ++DQVA+ +G++ GA Sbjct 6 WDLVYRPRKLPRWAIVAAVIVMAIHITFGLLLTIEDVGVRNLGSSDQVAIILIGVLFTGA 65 Query 67 VLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 +LL RPRLRVG+ G+ VRNL+ R+ W +V+G+++P A + DE+I V+A+Q Sbjct 66 ILLLTRPRLRVGAEGVEVRNLVPTRLFTWDQVLGLTYPEKGFGAWLLFPSDEHITVLAVQ 125 Query 127 AVDKDRAVAAMDTVRSLLARYR 148 A D +AV AM R L RYR Sbjct 126 ANDGPQAVEAMARFRELEERYR 147 >gi|300784681|ref|YP_003764972.1| hypothetical protein AMED_2775 [Amycolatopsis mediterranei U32] gi|299794195|gb|ADJ44570.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340526104|gb|AEK41309.1| hypothetical protein RAM_14105 [Amycolatopsis mediterranei S699] Length=147 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/134 (47%), Positives = 86/134 (65%), Gaps = 0/134 (0%) Query 10 VVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLL 69 +V+RP + A + V +LL+ G +GV FQ +DQ AM +G++LA V+L Sbjct 7 LVIRPRRAMIMCSVLAVALLAVFVVVAVLLRNGDTGVRFQRSDQAAMVGIGILLACGVML 66 Query 70 FARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVD 129 FA R+R + G+ VRN+L R WSEV+ VSFP G+ WAR++L DDEY VMA+QAVD Sbjct 67 FAIARVRADADGIEVRNVLVTRRFAWSEVLSVSFPDGASWARLELPDDEYHAVMAVQAVD 126 Query 130 KDRAVAAMDTVRSL 143 +DRAV A+ +R L Sbjct 127 RDRAVEAVRALRKL 140 >gi|258654271|ref|YP_003203427.1| hypothetical protein Namu_4149 [Nakamurella multipartita DSM 44233] gi|258557496|gb|ACV80438.1| hypothetical protein Namu_4149 [Nakamurella multipartita DSM 44233] Length=214 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/114 (51%), Positives = 78/114 (69%), Gaps = 0/114 (0%) Query 36 GLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGW 95 GLLLK GV F+ DQ+ + +GLVLA A++ ARPRLRV GL VRN+LG++ W Sbjct 49 GLLLKDVDEGVSFRAFDQIGLIGVGLVLAAAIMTAARPRLRVTEDGLWVRNVLGEQFFAW 108 Query 96 SEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTVRSLLARYRP 149 VI V++P + WA++ L DDE PVMAIQA+D+ RAV A++ VR+L R+ P Sbjct 109 ELVIRVAYPPNAPWAQLLLPDDETHPVMAIQALDRARAVRALEQVRALHDRFAP 162 >gi|21914868|dbj|BAA20057.1| ribX [Corynebacterium ammoniagenes] Length=184 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/143 (38%), Positives = 84/143 (59%), Gaps = 1/143 (0%) Query 8 WDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG-A 66 W++ + + A+ ++ H+ G++L V +G D++A +G+V++ A Sbjct 40 WELTISSPFLRKVAWVCIAIVIPVHLFMGIMLDVEFTGAYITFIDKLAFPGIGIVISIIA 99 Query 67 VLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 L F RPRLR S G+ +RN++G R W + G+SFP GSR ARI+L + EY+PV AIQ Sbjct 100 WLAFNRPRLRANSDGVEIRNIIGTRFYPWEVIYGMSFPEGSRMARIELPNFEYVPVWAIQ 159 Query 127 AVDKDRAVAAMDTVRSLLARYRP 149 + DK+ A+AA R L A+Y P Sbjct 160 SGDKEAAIAATRNFRELEAKYMP 182 >gi|257055605|ref|YP_003133437.1| hypothetical protein Svir_15750 [Saccharomonospora viridis DSM 43017] gi|256585477|gb|ACU96610.1| Protein of unknown function (DUF2581) [Saccharomonospora viridis DSM 43017] Length=154 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/136 (42%), Positives = 86/136 (64%), Gaps = 0/136 (0%) Query 10 VVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLL 69 V++RP + A A ++ V +LL+ +G +F +DQ+AM +G++LAGA +L Sbjct 14 VIVRPRRAFWMSAALAVVLLAVFVTVAVLLRSVDTGAIFAVSDQIAMVGVGVMLAGAAML 73 Query 70 FARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVD 129 FA PR+R + G+ VRN+ R W EV+ VSFP G+ +AR++L D EY +MAIQAVD Sbjct 74 FATPRVRADAEGVHVRNIGVSRYFRWDEVLSVSFPDGASFARLELPDFEYYSMMAIQAVD 133 Query 130 KDRAVAAMDTVRSLLA 145 ++RAV A+ +R A Sbjct 134 RERAVKAVRALRRFHA 149 >gi|38233901|ref|NP_939668.1| hypothetical protein DIP1315 [Corynebacterium diphtheriae NCTC 13129] gi|38200162|emb|CAE49843.1| Putative membrane protein [Corynebacterium diphtheriae] Length=186 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/144 (36%), Positives = 86/144 (60%), Gaps = 1/144 (0%) Query 8 WDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAV 67 WD+ + + +A++ A I H+ +++ +G +G DQ +GLV A A Sbjct 42 WDLEINSAYLRRWAWSGAIFILAIHIFLAVVVAIGDTGTTVTLIDQWGYFLVGLVFASAF 101 Query 68 LL-FARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQ 126 L FARPR+R G+ VRN +G R WS + G++FP GS++AR++L + EY+P+ AIQ Sbjct 102 YLAFARPRVRANEDGVEVRNFVGTRFYPWSVIYGLNFPQGSKFARLELPEFEYVPLWAIQ 161 Query 127 AVDKDRAVAAMDTVRSLLARYRPD 150 A D R+++A++ R L +++ P+ Sbjct 162 AGDGARSISAIEDFRILESQFMPE 185 >gi|340794450|ref|YP_004759913.1| hypothetical protein CVAR_1488 [Corynebacterium variabile DSM 44702] gi|340534360|gb|AEK36840.1| hypothetical protein CVAR_1488 [Corynebacterium variabile DSM 44702] Length=164 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 51/143 (36%), Positives = 77/143 (54%), Gaps = 0/143 (0%) Query 8 WDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAV 67 W + +R + A+ A +I H+ G++ G +G DQ A +GL+ + A Sbjct 21 WLLTVRSPFLKKVAWIAVVIIMALHIFMGVVSAAGDTGATVSAVDQWAFVGIGLLFSAAA 80 Query 68 LLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQA 127 L RPR+RV G+ VRN+LG + W + G+SFP SRWAR++L D E++P+MA Q Sbjct 81 LTLTRPRVRVNPRGVEVRNVLGTKFYPWRMIYGLSFPRNSRWARLELPDFEFVPMMAFQV 140 Query 128 VDKDRAVAAMDTVRSLLARYRPD 150 DK ++ R L RY P+ Sbjct 141 RDKATIAQQVEAFRRLEDRYMPE 163 >gi|296117957|ref|ZP_06836540.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306] gi|295969188|gb|EFG82430.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306] Length=188 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/126 (44%), Positives = 80/126 (64%), Gaps = 2/126 (1%) Query 25 AFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG-AVLLFARPRLRVGSAGLS 83 A LI V HV G++L V +G D+ A +G++L+ A L+F RPRLR + G+ Sbjct 62 AILIPV-HVFMGVMLDVEFTGAYITLIDKFAFPGIGVILSIIAWLVFNRPRLRANADGVE 120 Query 84 VRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTVRSL 143 +RN++G R W+ + G++FP GSR ARI+L + EY+PV AIQ+ DK+ A+AA R L Sbjct 121 IRNIIGTRFYPWAVIYGLAFPEGSRMARIELPNFEYVPVWAIQSGDKEAAIAATREFREL 180 Query 144 LARYRP 149 A+Y P Sbjct 181 EAKYMP 186 >gi|300781128|ref|ZP_07090982.1| RibX protein [Corynebacterium genitalium ATCC 33030] gi|300532835|gb|EFK53896.1| RibX protein [Corynebacterium genitalium ATCC 33030] Length=187 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 49/128 (39%), Positives = 78/128 (61%), Gaps = 1/128 (0%) Query 24 AAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLL-FARPRLRVGSAGL 82 A +I H+ G ++ + +G T D++A +GL+L+ +RPR+R G+ Sbjct 59 AIVVIMAVHIFMGAVVDIEFTGAAITTLDKLAFPGIGLILSAFTWWGLSRPRVRANEDGV 118 Query 83 SVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTVRS 142 VRN++G R W + G++FP GSR AR++L + EY+P+ AIQ+ DK+RAVAA+ R Sbjct 119 EVRNIIGTRFYPWVVIYGLAFPRGSRMARLELPEFEYVPLWAIQSADKERAVAAVKDFRE 178 Query 143 LLARYRPD 150 L A+Y P+ Sbjct 179 LEAQYMPE 186 >gi|227833019|ref|YP_002834726.1| hypothetical protein cauri_1195 [Corynebacterium aurimucosum ATCC 700975] gi|262182493|ref|ZP_06041914.1| hypothetical protein CaurA7_00734 [Corynebacterium aurimucosum ATCC 700975] gi|227454035|gb|ACP32788.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975] Length=207 Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 50/125 (40%), Positives = 73/125 (59%), Gaps = 1/125 (0%) Query 27 LIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG-AVLLFARPRLRVGSAGLSVR 85 L+ AH+ G + + +G T D+ A +G+V++ + L RPRLR S G+ +R Sbjct 81 LVMAAHLFMGFTVGLSFTGATVTTIDKFAFPGVGVVISILSWLALTRPRLRANSDGVEIR 140 Query 86 NLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTVRSLLA 145 N+LG R W + G+SFP GSR ARI+L D EY+PV A+Q+ DK + + + R L A Sbjct 141 NILGTRFYPWQVIYGLSFPEGSRMARIELPDFEYVPVWALQSGDKQDVITKVRSFRDLEA 200 Query 146 RYRPD 150 RY P Sbjct 201 RYMPQ 205 >gi|291300537|ref|YP_003511815.1| hypothetical protein Snas_3051 [Stackebrandtia nassauensis DSM 44728] gi|290569757|gb|ADD42722.1| hypothetical protein Snas_3051 [Stackebrandtia nassauensis DSM 44728] Length=152 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/108 (50%), Positives = 68/108 (63%), Gaps = 0/108 (0%) Query 43 SSGVVFQTADQVAMGALGLVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVS 102 G VF +AD AM LG++ A +L FARPR+ + VRNL G V W V V Sbjct 45 EGGGVFHSADAYAMVGLGVLAALGILTFARPRVWADEHKVRVRNLFGSTEVPWQIVESVR 104 Query 103 FPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTVRSLLARYRPD 150 FP G+ WA ++LADD+ I VMAIQ+VDKDRAVAA+ +R LLA R + Sbjct 105 FPRGASWAMLELADDDVIAVMAIQSVDKDRAVAAVRRLRELLAESRGE 152 >gi|336325641|ref|YP_004605607.1| hypothetical protein CRES_1087 [Corynebacterium resistens DSM 45100] gi|336101623|gb|AEI09443.1| hypothetical protein CRES_1087 [Corynebacterium resistens DSM 45100] Length=186 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 43/145 (30%), Positives = 78/145 (54%), Gaps = 0/145 (0%) Query 6 NDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG 65 ++W++ + A+ ++ H+ ++ VG++GV ADQ+ +GL+ Sbjct 40 DEWELEFTSPFLKRLAWILVLVVLAVHIFMAFIVAVGNTGVAVTLADQLGFVGIGLIFCV 99 Query 66 AVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAI 125 L RPR+RV S G+ VRN++ + W + G+SFP ++WAR++L D E++P+MA+ Sbjct 100 PALGLLRPRVRVNSTGVEVRNIVNAQFYPWEIIYGLSFPASAKWARLELPDFEFVPMMAL 159 Query 126 QAVDKDRAVAAMDTVRSLLARYRPD 150 DK+ ++ R +Y PD Sbjct 160 NIYDKNLIAHRVEEFRQREDKYMPD 184 >gi|300858532|ref|YP_003783515.1| hypothetical protein cpfrc_01115 [Corynebacterium pseudotuberculosis FRC41] gi|300685986|gb|ADK28908.1| hypothetical protein cpfrc_01115 [Corynebacterium pseudotuberculosis FRC41] gi|302206244|gb|ADL10586.1| Hypothetical protein CpC231_1110 [Corynebacterium pseudotuberculosis C231] gi|302330802|gb|ADL20996.1| Hypothetical protein Cp1002_1111 [Corynebacterium pseudotuberculosis 1002] gi|308276486|gb|ADO26385.1| Putative membrane protein [Corynebacterium pseudotuberculosis I19] gi|341824926|gb|AEK92447.1| Hypothetical protein CpPAT10_1110 [Corynebacterium pseudotuberculosis PAT10] Length=188 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 49/146 (34%), Positives = 83/146 (57%), Gaps = 1/146 (0%) Query 6 NDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG 65 N W++V+ ++A+ +A ++ H+ +++ +G +G DQ +G+V AG Sbjct 42 NPWELVVTSRKLKIWAWVSAAIVLGLHIFLAIVVAIGDTGTTVTLIDQWGYLLVGVVFAG 101 Query 66 AVLL-FARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMA 124 L +RPR+RV G+ VRN +G R W + G++FP GSR AR++L D EY+P+ A Sbjct 102 LFFLALSRPRVRVNKDGVDVRNFVGSRFYPWVLIYGLNFPEGSRMARLELPDFEYVPLWA 161 Query 125 IQAVDKDRAVAAMDTVRSLLARYRPD 150 Q+ D + A++ R+L A Y P+ Sbjct 162 FQSADGLAGLRAVERFRALEANYMPE 187 >gi|68536083|ref|YP_250788.1| hypothetical protein jk1006 [Corynebacterium jeikeium K411] gi|68263682|emb|CAI37170.1| hypothetical protein jk1006 [Corynebacterium jeikeium K411] Length=151 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 45/144 (32%), Positives = 76/144 (53%), Gaps = 0/144 (0%) Query 6 NDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAG 65 +W++ + + A+ LI H+ +++ VG +GV ADQ +GLV + Sbjct 5 ENWELEVSSPFLKKLAWILVVLIMAVHIFMAIVVAVGDTGVTVTKADQWGFIGIGLVFSF 64 Query 66 AVLLFARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAI 125 L RP ++V S G+ VRN++ + W + G+SFP ++WAR++L D E++P+MA+ Sbjct 65 VALSLLRPHVKVNSEGVEVRNIVNGQFYPWEIIHGLSFPQEAKWARLELPDFEFVPMMAL 124 Query 126 QAVDKDRAVAAMDTVRSLLARYRP 149 DK ++ R L RY P Sbjct 125 NIYDKQLIAQRVEDFRQLEDRYMP 148 Lambda K H 0.326 0.139 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131222683000 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40