BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1418

Length=228
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608556|ref|NP_215934.1|  lipoprotein LprH [Mycobacterium tub...   461    2e-128
gi|167968457|ref|ZP_02550734.1|  lipoprotein lprH [Mycobacterium ...   423    1e-116
gi|340626432|ref|YP_004744884.1|  putative lipoprotein LPRH [Myco...   422    3e-116
gi|308369793|ref|ZP_07419086.2|  lipoprotein lprH [Mycobacterium ...   421    3e-116
gi|342858711|ref|ZP_08715366.1|  putative lipoprotein LPRH [Mycob...   243    1e-62 
gi|118617427|ref|YP_905759.1|  lipoprotein LprH [Mycobacterium ul...   233    2e-59 
gi|183982238|ref|YP_001850529.1|  lipoprotein LprH [Mycobacterium...   233    2e-59 
gi|296392941|ref|YP_003657825.1|  hypothetical protein Srot_0510 ...  59.7    3e-07 
gi|317507882|ref|ZP_07965580.1|  hypothetical protein HMPREF9336_...  50.4    2e-04 
gi|317507881|ref|ZP_07965579.1|  hypothetical protein HMPREF9336_...  40.0    0.27  
gi|315444365|ref|YP_004077244.1|  hypothetical protein Mspyr1_278...  38.9    0.65  
gi|145224028|ref|YP_001134706.1|  hypothetical protein Mflv_3443 ...  38.9    0.65  
gi|158522698|ref|YP_001530568.1|  hypothetical protein Dole_2688 ...  37.0    2.2   


>gi|15608556|ref|NP_215934.1| lipoprotein LprH [Mycobacterium tuberculosis H37Rv]
 gi|15840875|ref|NP_335912.1| hypothetical protein MT1461 [Mycobacterium tuberculosis CDC1551]
 gi|31792612|ref|NP_855105.1| lipoprotein LprH [Mycobacterium bovis AF2122/97]
 53 more sequence titles
 Length=228

 Score =  461 bits (1187),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%)

Query  1    MACLGRPGCRGWAGASLVLVVVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLL  60
            MACLGRPGCRGWAGASLVLVVVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLL
Sbjct  1    MACLGRPGCRGWAGASLVLVVVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLL  60

Query  61   QDGDRAPFGQVTQSRVGDSYFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLP  120
            QDGDRAPFGQVTQSRVGDSYFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLP
Sbjct  61   QDGDRAPFGQVTQSRVGDSYFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLP  120

Query  121  YAESVDVYTNVLNVHDVVWNGFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWT  180
            YAESVDVYTNVLNVHDVVWNGFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWT
Sbjct  121  YAESVDVYTNVLNVHDVVWNGFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWT  180

Query  181  MSNPRWTCDYGLAVVPHAVLVLSACGFKPGFPMAEWASKRRAQLDSQV  228
            MSNPRWTCDYGLAVVPHAVLVLSACGFKPGFPMAEWASKRRAQLDSQV
Sbjct  181  MSNPRWTCDYGLAVVPHAVLVLSACGFKPGFPMAEWASKRRAQLDSQV  228


>gi|167968457|ref|ZP_02550734.1| lipoprotein lprH [Mycobacterium tuberculosis H37Ra]
 gi|308231836|ref|ZP_07413938.2| lipoprotein lprH [Mycobacterium tuberculosis SUMu001]
 gi|308370715|ref|ZP_07422470.2| lipoprotein lprH [Mycobacterium tuberculosis SUMu003]
 16 more sequence titles
 Length=209

 Score =  423 bits (1087),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 208/209 (99%), Positives = 209/209 (100%), Gaps = 0/209 (0%)

Query  20   VVVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLLQDGDRAPFGQVTQSRVGDS  79
            +VVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLLQDGDRAPFGQVTQSRVGDS
Sbjct  1    MVVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLLQDGDRAPFGQVTQSRVGDS  60

Query  80   YFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNVLNVHDVVW  139
            YFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNVLNVHDVVW
Sbjct  61   YFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNVLNVHDVVW  120

Query  140  NGFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWTMSNPRWTCDYGLAVVPHAV  199
            NGFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWTMSNPRWTCDYGLAVVPHAV
Sbjct  121  NGFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWTMSNPRWTCDYGLAVVPHAV  180

Query  200  LVLSACGFKPGFPMAEWASKRRAQLDSQV  228
            LVLSACGFKPGFPMAEWASKRRAQLDSQV
Sbjct  181  LVLSACGFKPGFPMAEWASKRRAQLDSQV  209


>gi|340626432|ref|YP_004744884.1| putative lipoprotein LPRH [Mycobacterium canettii CIPT 140010059]
 gi|340004622|emb|CCC43766.1| putative lipoprotein LPRH [Mycobacterium canettii CIPT 140010059]
Length=228

 Score =  422 bits (1084),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 223/228 (98%), Positives = 224/228 (99%), Gaps = 0/228 (0%)

Query  1    MACLGRPGCRGWAGASLVLVVVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLL  60
            MACLGRPG RGWA ASLVLVVVLALAACTESVAGRAMRATDRSSG+PTSAKPARARDLLL
Sbjct  1    MACLGRPGYRGWAAASLVLVVVLALAACTESVAGRAMRATDRSSGVPTSAKPARARDLLL  60

Query  61   QDGDRAPFGQVTQSRVGDSYFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLP  120
            QDGDRAPFGQVTQSRVGDSYFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTG LP
Sbjct  61   QDGDRAPFGQVTQSRVGDSYFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGLLP  120

Query  121  YAESVDVYTNVLNVHDVVWNGFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWT  180
            YAESVDVYTNVLNVHDVVWNGFRDVSHCRGDAVGVS AGRSTPMRLRYFATLSDGVLVWT
Sbjct  121  YAESVDVYTNVLNVHDVVWNGFRDVSHCRGDAVGVSPAGRSTPMRLRYFATLSDGVLVWT  180

Query  181  MSNPRWTCDYGLAVVPHAVLVLSACGFKPGFPMAEWASKRRAQLDSQV  228
            MSNPRWTCDYGLAVVPHAVLVLSACGFKPGFPMAEWASKRRAQLDSQV
Sbjct  181  MSNPRWTCDYGLAVVPHAVLVLSACGFKPGFPMAEWASKRRAQLDSQV  228


>gi|308369793|ref|ZP_07419086.2| lipoprotein lprH [Mycobacterium tuberculosis SUMu002]
 gi|308374307|ref|ZP_07435541.2| lipoprotein lprH [Mycobacterium tuberculosis SUMu006]
 gi|308375457|ref|ZP_07443986.2| lipoprotein lprH [Mycobacterium tuberculosis SUMu007]
 gi|308376715|ref|ZP_07439790.2| lipoprotein lprH [Mycobacterium tuberculosis SUMu008]
 gi|308326408|gb|EFP15259.1| lipoprotein lprH [Mycobacterium tuberculosis SUMu002]
 gi|308342400|gb|EFP31251.1| lipoprotein lprH [Mycobacterium tuberculosis SUMu006]
 gi|308346241|gb|EFP35092.1| lipoprotein lprH [Mycobacterium tuberculosis SUMu007]
 gi|308350193|gb|EFP39044.1| lipoprotein lprH [Mycobacterium tuberculosis SUMu008]
Length=208

 Score =  421 bits (1083),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 207/208 (99%), Positives = 208/208 (100%), Gaps = 0/208 (0%)

Query  21   VVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLLQDGDRAPFGQVTQSRVGDSY  80
            +VLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLLQDGDRAPFGQVTQSRVGDSY
Sbjct  1    MVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLLQDGDRAPFGQVTQSRVGDSY  60

Query  81   FTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNVLNVHDVVWN  140
            FTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNVLNVHDVVWN
Sbjct  61   FTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNVLNVHDVVWN  120

Query  141  GFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWTMSNPRWTCDYGLAVVPHAVL  200
            GFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWTMSNPRWTCDYGLAVVPHAVL
Sbjct  121  GFRDVSHCRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWTMSNPRWTCDYGLAVVPHAVL  180

Query  201  VLSACGFKPGFPMAEWASKRRAQLDSQV  228
            VLSACGFKPGFPMAEWASKRRAQLDSQV
Sbjct  181  VLSACGFKPGFPMAEWASKRRAQLDSQV  208


>gi|342858711|ref|ZP_08715366.1| putative lipoprotein LPRH [Mycobacterium colombiense CECT 3035]
 gi|342134415|gb|EGT87595.1| putative lipoprotein LPRH [Mycobacterium colombiense CECT 3035]
Length=182

 Score =  243 bits (621),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 117/177 (67%), Positives = 133/177 (76%), Gaps = 0/177 (0%)

Query  52   PARARDLLLQDGDRAPFGQVTQSRVGDSYFTSAVPPECSAALLFKGSPLRPDGSSDHAEA  111
            PARA+DLLLQ GD  PFG      VGD+YFTSA PP+CSAA LFK SPLRP G SDHAE+
Sbjct  5    PARAQDLLLQSGDDTPFGAPAAIPVGDNYFTSARPPDCSAAQLFKASPLRPPGPSDHAES  64

Query  112  AYNVTGPLPYAESVDVYTNVLNVHDVVWNGFRDVSHCRGDAVGVSRAGRSTPMRLRYFAT  171
            AY  +GP  YAES+D+Y N L+ HDVVW GF  VS CR DAVGVS  G  T MRL YF  
Sbjct  65   AYQFSGPAMYAESIDLYDNALDAHDVVWGGFSAVSKCRDDAVGVSPQGAFTAMRLSYFGI  124

Query  172  LSDGVLVWTMSNPRWTCDYGLAVVPHAVLVLSACGFKPGFPMAEWASKRRAQLDSQV  228
             +DGVLVWTM+ P WTCDYGLAV+PHA L+LSAC   PGFPM +WA+KRRAQ+D + 
Sbjct  125  PADGVLVWTMTEPAWTCDYGLAVLPHAALLLSACNNAPGFPMPDWAAKRRAQVDGRT  181


>gi|118617427|ref|YP_905759.1| lipoprotein LprH [Mycobacterium ulcerans Agy99]
 gi|118569537|gb|ABL04288.1| lipoprotein LprH [Mycobacterium ulcerans Agy99]
Length=207

 Score =  233 bits (593),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 123/201 (62%), Positives = 141/201 (71%), Gaps = 6/201 (2%)

Query  28   CTESVAGRAMRATDRSSGLPTSAKPARARDLLLQDGDRAPFGQVTQSRVGDSYFTSAVPP  87
            CT SVAGRA+RA    SG P +     ARDLLLQDGD  P G  + +RVG++YFTSA PP
Sbjct  13   CTNSVAGRAIRA----SGQPRAH--ISARDLLLQDGDNTPLGPASSTRVGETYFTSARPP  66

Query  88   ECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNVLNVHDVVWNGFRDVSH  147
            EC+AA+LFKGSPLRP GS+D AE+AY V     YAESVDVY + LN HDVV NGFR VS 
Sbjct  67   ECTAAVLFKGSPLRPPGSADFAESAYRVQATAMYAESVDVYNSPLNPHDVVQNGFRVVSQ  126

Query  148  CRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWTMSNPRWTCDYGLAVVPHAVLVLSACGF  207
            C GDA     AG   P+ L+ F T ++GVLVW+M    W CDYGLAVVP A LV+SAC  
Sbjct  127  CHGDAFAGYPAGEFGPITLKSFGTPAEGVLVWSMGRSDWNCDYGLAVVPRAALVISACDQ  186

Query  208  KPGFPMAEWASKRRAQLDSQV  228
              GFPMAEWA  RRAQLD +V
Sbjct  187  NSGFPMAEWAVTRRAQLDDRV  207


>gi|183982238|ref|YP_001850529.1| lipoprotein LprH [Mycobacterium marinum M]
 gi|183175564|gb|ACC40674.1| lipoprotein LprH [Mycobacterium marinum M]
Length=217

 Score =  233 bits (593),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 123/201 (62%), Positives = 141/201 (71%), Gaps = 6/201 (2%)

Query  28   CTESVAGRAMRATDRSSGLPTSAKPARARDLLLQDGDRAPFGQVTQSRVGDSYFTSAVPP  87
            CT SVAGRA+RA    SG P +     ARDLLLQDGD  P G  + +RVG++YFTSA PP
Sbjct  23   CTNSVAGRAIRA----SGQPRAH--ILARDLLLQDGDNTPLGPASSTRVGETYFTSARPP  76

Query  88   ECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNVLNVHDVVWNGFRDVSH  147
            EC+AA+LFKGSPLRP GS+D AE+AY V     YAESVDVY + LN HDVV NGFR VS 
Sbjct  77   ECTAAVLFKGSPLRPPGSADFAESAYRVQATAMYAESVDVYNSPLNPHDVVQNGFRAVSQ  136

Query  148  CRGDAVGVSRAGRSTPMRLRYFATLSDGVLVWTMSNPRWTCDYGLAVVPHAVLVLSACGF  207
            C GDA     AG   P+ L+ F T ++GVLVW+M    W CDYGLAVVP A LV+SAC  
Sbjct  137  CHGDAFAGYPAGEFGPITLKSFGTPAEGVLVWSMGRSDWNCDYGLAVVPRAALVISACDQ  196

Query  208  KPGFPMAEWASKRRAQLDSQV  228
              GFPMAEWA  RRAQLD +V
Sbjct  197  NSGFPMAEWAVTRRAQLDDRV  217


>gi|296392941|ref|YP_003657825.1| hypothetical protein Srot_0510 [Segniliparus rotundus DSM 44985]
 gi|296180088|gb|ADG96994.1| hypothetical protein Srot_0510 [Segniliparus rotundus DSM 44985]
Length=296

 Score = 59.7 bits (143),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 59/217 (28%), Positives = 92/217 (43%), Gaps = 16/217 (7%)

Query  18   VLVVVLALAACTESVAGRAMRATDRSSGLPTSAKPARARDLLLQDGDRAPFGQVTQSRVG  77
            V V + ALA+C +     A RA       P +A+   A   L + G     G +      
Sbjct  84   VAVTITALASCGDPKEPGARRAQSSQRVAPIAAE---AIQSLFEPGHFNASGNI------  134

Query  78   DSYFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVD---VYTNVLNV  134
            +S ++SA PPEC A +L   SPL   G    A A     G   +A+ V+   VY    + 
Sbjct  135  ESMYSSASPPECRALVLEVDSPLLMRGQVASASAIAPKPGDKEHAQIVEIAAVYREGFSA  194

Query  135  HDVVWNGFRDVSHCRGDAVGVSR--AGRSTPMRLRYFATLSDGVLVWTMS--NPRWTCDY  190
             DV+        HC G  +  S    G ST   +   ++ S  +L+WT+S     W C+ 
Sbjct  195  TDVIAEAAAMREHCEGTPITGSTQGGGNSTFQLIGQPSSGSPNILLWTLSALGKAWFCNN  254

Query  191  GLAVVPHAVLVLSACGFKPGFPMAEWASKRRAQLDSQ  227
             L    +A + +++C   P   M E A    ++++ Q
Sbjct  255  ALIAAHNAAVEITSCYPSPAPKMRELAQSALSRIERQ  291


>gi|317507882|ref|ZP_07965580.1| hypothetical protein HMPREF9336_01952 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316253811|gb|EFV13183.1| hypothetical protein HMPREF9336_01952 [Segniliparus rugosus ATCC 
BAA-974]
Length=285

 Score = 50.4 bits (119),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 56/218 (26%), Positives = 95/218 (44%), Gaps = 32/218 (14%)

Query  16   SLVLVVVLALAACTESVAGRAMRATDRSSGLPTSAK----PARARDLLLQDGDRAPFGQV  71
            SLV  +++A+++C       A    D  +G P++ K    PA A   L + G     G +
Sbjct  71   SLVAAIIMAVSSC-------AHPGKDGENGEPSTPKVAPIPADAIQQLFEPGHFDASGNL  123

Query  72   TQSRVGDSYFTSAVPPECSAALLFKGSPLRPDGSSDHAEAAYNVTGPLP----YAESVD-  126
                  ++ ++SA PPEC   +L   SPL      DH  A  +V  P P    +A+ V+ 
Sbjct  124  ------ENMYSSASPPECRGLVLEVDSPLL---MRDHV-ATASVIAPKPGDPEHAQIVEI  173

Query  127  --VYTNVLNVHDVVWNGFRDVSHCRGDAVGVSR--AGRSTPMRLRYFATLSDGVLVWTMS  182
              +Y +  +  D++    +    C+G  +  S    G ST   +    + S  VL+WT++
Sbjct  174  AAIYRDDFSPTDLIAEAAKTRERCQGTPITGSTQGGGNSTFQLVGQPDSGSPNVLLWTLA  233

Query  183  --NPRWTCDYGLAVVPHAVLVLSACGFKPGFPMAEWAS  218
                 W C+  L    +A + +++C   P   M E A 
Sbjct  234  AVGKSWFCNNALIAAHNAAMEVTSCYPTPAPGMKELAQ  271


>gi|317507881|ref|ZP_07965579.1| hypothetical protein HMPREF9336_01951 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316253810|gb|EFV13182.1| hypothetical protein HMPREF9336_01951 [Segniliparus rugosus ATCC 
BAA-974]
Length=224

 Score = 40.0 bits (92),  Expect = 0.27, Method: Compositional matrix adjust.
 Identities = 43/180 (24%), Positives = 74/180 (42%), Gaps = 7/180 (3%)

Query  52   PARARDLLLQDGDRAPFG-QVTQSRVGDSYFTSAVPPECSAALLFKGSPLRPDGSSDHAE  110
            PA A +LL + G+    G Q  Q+    S +T A P +C   ++ + SP+ P G      
Sbjct  41   PAEAPELLSKPGELVIGGTQAHQADFTHSVYTHADPAQCPF-MVAEESPILPKGPIARNS  99

Query  111  AAYNVTGPLPYAESVDVYTNVLNVHDVVWNGFRDVSHCRGDAV-GVSRAGRSTPMRLRY-  168
            A +   G     E   VY+   +    +    + ++ C G  V   +  G   P   +  
Sbjct  100  AWWGTNGTHTVIEVASVYSRGFDAAAALAEARQRLAACYGKRVDAFTDRGPGEPGMFQQG  159

Query  169  --FATLSDGVLVWTMSNPRWTCDYGLAVVPHAVLVLSACGFKPGFPMAEWASKRRAQLDS  226
                T +  +  W  +N  WTC YGL    +AV++ +AC  +  F +      +  ++D 
Sbjct  160  PEAGTANAQLWSWGRAN-VWTCAYGLVAKYNAVVLAAACEQRGDFDLRALVLAKERRMDQ  218


>gi|315444365|ref|YP_004077244.1| hypothetical protein Mspyr1_27800 [Mycobacterium sp. Spyr1]
 gi|315262668|gb|ADT99409.1| hypothetical protein Mspyr1_27800 [Mycobacterium sp. Spyr1]
Length=216

 Score = 38.9 bits (89),  Expect = 0.65, Method: Compositional matrix adjust.
 Identities = 36/147 (25%), Positives = 55/147 (38%), Gaps = 25/147 (17%)

Query  79   SYFTSAVPPECSAA-------LLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNV  131
            + F  A P  C+         L+  G P+  DG    +E      G     E V VY + 
Sbjct  60   NLFVVAEPQRCAGLAREVDPPLIEAGRPVATDGGHWTSE-----DGRFYIEEMVAVYLSD  114

Query  132  LNVHDVVWNGFRDVSHCRGDAVGVSRAGRSTPMRLRYF-------ATLSDGVLVWTMSNP  184
             +    + +    V  C G  + V      T MR R +       A   DG ++W++   
Sbjct  115  FDAEGALRSARATVDECLGSRLSV------TTMRDRVYDFEVAPGAEGPDGSVLWSLRAV  168

Query  185  RWTCDYGLAVVPHAVLVLSACGFKPGF  211
             W CD       +A + ++ CG  PGF
Sbjct  169  DWNCDNLFVAAYNAAVEITTCGAAPGF  195


>gi|145224028|ref|YP_001134706.1| hypothetical protein Mflv_3443 [Mycobacterium gilvum PYR-GCK]
 gi|145216514|gb|ABP45918.1| hypothetical protein Mflv_3443 [Mycobacterium gilvum PYR-GCK]
Length=219

 Score = 38.9 bits (89),  Expect = 0.65, Method: Compositional matrix adjust.
 Identities = 36/147 (25%), Positives = 55/147 (38%), Gaps = 25/147 (17%)

Query  79   SYFTSAVPPECSAA-------LLFKGSPLRPDGSSDHAEAAYNVTGPLPYAESVDVYTNV  131
            + F  A P  C+         L+  G P+  DG    +E      G     E V VY + 
Sbjct  63   NLFVVAEPQRCAGLAREVDPPLIEAGRPVATDGGHWTSE-----DGRFYIEEMVAVYLSD  117

Query  132  LNVHDVVWNGFRDVSHCRGDAVGVSRAGRSTPMRLRYF-------ATLSDGVLVWTMSNP  184
             +    + +    V  C G  + V      T MR R +       A   DG ++W++   
Sbjct  118  FDAEGALRSARATVDECLGSRLSV------TTMRDRVYDFEVAPGAEGPDGSVLWSLRAV  171

Query  185  RWTCDYGLAVVPHAVLVLSACGFKPGF  211
             W CD       +A + ++ CG  PGF
Sbjct  172  DWNCDNLFVAAYNAAVEITTCGAAPGF  198


>gi|158522698|ref|YP_001530568.1| hypothetical protein Dole_2688 [Desulfococcus oleovorans Hxd3]
 gi|158511524|gb|ABW68491.1| hypothetical protein Dole_2688 [Desulfococcus oleovorans Hxd3]
Length=395

 Score = 37.0 bits (84),  Expect = 2.2, Method: Compositional matrix adjust.
 Identities = 30/110 (28%), Positives = 45/110 (41%), Gaps = 32/110 (29%)

Query  77   GDSYFTSAVPPEC---SAALLFKGSPLRPDGSSDH------------AEAAYNVTGPLP-  120
            G S++   +P +    S  L+F+G PLR    + H            A+    + G  P 
Sbjct  98   GTSFYKRPLPIKTGPTSEVLVFRGDPLRLVFRTHHGITDGQGTFMWIADVFRILRGEAPE  157

Query  121  ---YAESVDVYTNVLNVHDVVWNGFR-------------DVSHCRGDAVG  154
               YAES+D + NV  +H+  W G +             D+S CR D  G
Sbjct  158  GSGYAESIDQFRNVTGMHEPKWKGGQCVAPTGNPGAASPDISFCRMDVKG  207



Lambda     K      H
   0.321    0.134    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 294240045594


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40