BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1420 Length=646 Score E Sequences producing significant alignments: (Bits) Value gi|15608558|ref|NP_215936.1| excinuclease ABC subunit C [Mycobac... 1306 0.0 gi|298524925|ref|ZP_07012334.1| excinuclease ABC (subunit C-nucl... 1305 0.0 gi|294994982|ref|ZP_06800673.1| excinuclease ABC subunit C [Myco... 1304 0.0 gi|289749978|ref|ZP_06509356.1| excinuclease ABC subunit C uvrC ... 1303 0.0 gi|339294398|gb|AEJ46509.1| excinuclease ABC subunit C [Mycobact... 1265 0.0 gi|289757527|ref|ZP_06516905.1| excinuclease ABC subunit C [Myco... 1185 0.0 gi|240171790|ref|ZP_04750449.1| excinuclease ABC subunit C [Myco... 1174 0.0 gi|41407244|ref|NP_960080.1| excinuclease ABC subunit C [Mycobac... 1171 0.0 gi|296170712|ref|ZP_06852287.1| excision endonuclease subunit Uv... 1168 0.0 gi|342858716|ref|ZP_08715371.1| excinuclease ABC subunit C [Myco... 1167 0.0 gi|254775803|ref|ZP_05217319.1| excinuclease ABC subunit C [Myco... 1166 0.0 gi|183982240|ref|YP_001850531.1| excinuclease ABC (subunit c-nuc... 1155 0.0 gi|118463596|ref|YP_882542.1| excinuclease ABC subunit C [Mycoba... 1132 0.0 gi|254822013|ref|ZP_05227014.1| excinuclease ABC subunit C [Myco... 1129 0.0 gi|15827213|ref|NP_301476.1| excinuclease ABC subunit C [Mycobac... 1128 0.0 gi|336461608|gb|EGO40473.1| excinuclease ABC, C subunit [Mycobac... 1127 0.0 gi|118617429|ref|YP_905761.1| excinuclease ABC subunit C [Mycoba... 1115 0.0 gi|118472646|ref|YP_887394.1| excinuclease ABC subunit C [Mycoba... 1084 0.0 gi|333990922|ref|YP_004523536.1| excinuclease ABC (subunit c-nuc... 1073 0.0 gi|126435020|ref|YP_001070711.1| excinuclease ABC subunit C [Myc... 1073 0.0 gi|108799362|ref|YP_639559.1| excinuclease ABC subunit C [Mycoba... 1072 0.0 gi|145224297|ref|YP_001134975.1| excinuclease ABC subunit C [Myc... 1065 0.0 gi|120403681|ref|YP_953510.1| excinuclease ABC subunit C [Mycoba... 1056 0.0 gi|169629868|ref|YP_001703517.1| UvrABC system protein C UvrC [M... 1035 0.0 gi|111024123|ref|YP_707095.1| excinuclease ABC subunit C [Rhodoc... 991 0.0 gi|54025564|ref|YP_119806.1| excinuclease ABC subunit C [Nocardi... 990 0.0 gi|226366363|ref|YP_002784146.1| excinuclease ABC subunit C [Rho... 986 0.0 gi|343924576|ref|ZP_08764124.1| UvrABC system protein C [Gordoni... 984 0.0 gi|229493469|ref|ZP_04387254.1| excinuclease ABC subunit C [Rhod... 977 0.0 gi|226306512|ref|YP_002766472.1| UvrABC system protein C [Rhodoc... 974 0.0 gi|262202286|ref|YP_003273494.1| excinuclease ABC subunit C [Gor... 970 0.0 gi|312139598|ref|YP_004006934.1| excinuclease ABC subunit c uvrc... 967 0.0 gi|333919552|ref|YP_004493133.1| UvrABC system protein C [Amycol... 954 0.0 gi|326382177|ref|ZP_08203869.1| excinuclease ABC subunit C [Gord... 939 0.0 gi|296140249|ref|YP_003647492.1| excinuclease ABC subunit C [Tsu... 931 0.0 gi|257055608|ref|YP_003133440.1| Excinuclease ABC subunit C [Sac... 891 0.0 gi|302525893|ref|ZP_07278235.1| excinuclease ABC, C subunit [Str... 891 0.0 gi|256379213|ref|YP_003102873.1| excinuclease ABC subunit C [Act... 890 0.0 gi|324999180|ref|ZP_08120292.1| Excinuclease ABC subunit C [Pseu... 875 0.0 gi|300784684|ref|YP_003764975.1| excinuclease ABC subunit C [Amy... 872 0.0 gi|258652974|ref|YP_003202130.1| excinuclease ABCsubunit C [Naka... 866 0.0 gi|334696949|gb|AEG81746.1| UvrABC system protein C [Corynebacte... 863 0.0 gi|337290834|ref|YP_004629855.1| UvrABC system protein C [Coryne... 863 0.0 gi|300858531|ref|YP_003783514.1| UvrABC system protein C [Coryne... 857 0.0 gi|308276485|gb|ADO26384.1| UvrABC system protein C [Corynebacte... 855 0.0 gi|227504395|ref|ZP_03934444.1| excinuclease ABC subunit C [Cory... 855 0.0 gi|341824925|gb|AEK92446.1| UvrABC system protein C [Corynebacte... 853 0.0 gi|25028267|ref|NP_738321.1| excinuclease ABC subunit C [Coryneb... 847 0.0 gi|319948952|ref|ZP_08023057.1| excinuclease ABC subunit C [Diet... 847 0.0 gi|344044961|gb|EGV40635.1| excinuclease ABC subunit C [Coryneba... 844 0.0 >gi|15608558|ref|NP_215936.1| excinuclease ABC subunit C [Mycobacterium tuberculosis H37Rv] gi|15840877|ref|NP_335914.1| excinuclease ABC subunit C [Mycobacterium tuberculosis CDC1551] gi|31792614|ref|NP_855107.1| excinuclease ABC subunit C [Mycobacterium bovis AF2122/97] 68 more sequence titles Length=646 Score = 1306 bits (3379), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/646 (99%), Positives = 646/646 (100%), Gaps = 0/646 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY Sbjct 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL Sbjct 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI Sbjct 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 Query 301 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 360 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV Sbjct 301 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 360 Query 361 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 420 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV Sbjct 361 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 420 Query 421 SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 480 SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ Sbjct 421 SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 480 Query 481 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 540 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV Sbjct 481 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 540 Query 541 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 600 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA Sbjct 541 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 600 Query 601 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR Sbjct 601 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 >gi|298524925|ref|ZP_07012334.1| excinuclease ABC (subunit C-nuclease) uvrC [Mycobacterium tuberculosis 94_M4241A] gi|298494719|gb|EFI30013.1| excinuclease ABC (subunit C-nuclease) uvrC [Mycobacterium tuberculosis 94_M4241A] Length=646 Score = 1305 bits (3377), Expect = 0.0, Method: Compositional matrix adjust. Identities = 644/646 (99%), Positives = 645/646 (99%), Gaps = 0/646 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY Sbjct 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL Sbjct 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI Sbjct 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 Query 301 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 360 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV Sbjct 301 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 360 Query 361 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 420 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV Sbjct 361 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 420 Query 421 SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 480 SHVQGTDVVGSLV FEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ Sbjct 421 SHVQGTDVVGSLVAFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 480 Query 481 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 540 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV Sbjct 481 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 540 Query 541 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 600 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA Sbjct 541 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 600 Query 601 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR Sbjct 601 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 >gi|294994982|ref|ZP_06800673.1| excinuclease ABC subunit C [Mycobacterium tuberculosis 210] gi|326903041|gb|EGE49974.1| excinuclease ABC subunit C uvrC [Mycobacterium tuberculosis W-148] Length=646 Score = 1304 bits (3375), Expect = 0.0, Method: Compositional matrix adjust. Identities = 643/646 (99%), Positives = 645/646 (99%), Gaps = 0/646 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY Sbjct 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL Sbjct 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWI+EKPGEPGDSGI Sbjct 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIIEKPGEPGDSGI 300 Query 301 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 360 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV Sbjct 301 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 360 Query 361 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 420 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV Sbjct 361 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 420 Query 421 SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 480 SHVQGTDVVGSLV FEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ Sbjct 421 SHVQGTDVVGSLVAFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 480 Query 481 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 540 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV Sbjct 481 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 540 Query 541 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 600 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA Sbjct 541 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 600 Query 601 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR Sbjct 601 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 >gi|289749978|ref|ZP_06509356.1| excinuclease ABC subunit C uvrC [Mycobacterium tuberculosis T92] gi|289690565|gb|EFD57994.1| excinuclease ABC subunit C uvrC [Mycobacterium tuberculosis T92] Length=646 Score = 1303 bits (3373), Expect = 0.0, Method: Compositional matrix adjust. Identities = 644/646 (99%), Positives = 645/646 (99%), Gaps = 0/646 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY Sbjct 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCI RVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL Sbjct 181 APCISRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI Sbjct 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 Query 301 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 360 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV Sbjct 301 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 360 Query 361 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 420 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV Sbjct 361 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 420 Query 421 SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 480 SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ Sbjct 421 SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 480 Query 481 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 540 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV Sbjct 481 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 540 Query 541 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 600 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA Sbjct 541 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 600 Query 601 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR Sbjct 601 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 >gi|339294398|gb|AEJ46509.1| excinuclease ABC subunit C [Mycobacterium tuberculosis CCDC5079] gi|339298035|gb|AEJ50145.1| excinuclease ABC subunit C [Mycobacterium tuberculosis CCDC5180] Length=627 Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust. Identities = 624/627 (99%), Positives = 626/627 (99%), Gaps = 0/627 (0%) Query 20 VYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTEVEAL 79 +YRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTEVEAL Sbjct 1 MYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTEVEAL 60 Query 80 QLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYSHAWA 139 QLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYSHAWA Sbjct 61 QLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYSHAWA 120 Query 140 IRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVDAAQHRQIVADF 199 IRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVDAAQHRQIVADF Sbjct 121 IRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVDAAQHRQIVADF 180 Query 200 CDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGTDADV 259 CDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGTDADV Sbjct 181 CDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGTDADV 240 Query 260 VAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGIQLVEQFLTQFYGDQAALDD 319 VAFADDELEAAVQVFHVRGGRVRGQRGWI+EKPGEPGDSGIQLVEQFLTQFYGDQAALDD Sbjct 241 VAFADDELEAAVQVFHVRGGRVRGQRGWIIEKPGEPGDSGIQLVEQFLTQFYGDQAALDD 300 Query 320 AADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAED 379 AADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAED Sbjct 301 AADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAED 360 Query 380 ALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDGL 439 ALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLV FEDGL Sbjct 361 ALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVAFEDGL 420 Query 440 PRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSDPDLLSPERKSRRFAYPP 499 PRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSDPDLLSPERKSRRFAYPP Sbjct 421 PRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSDPDLLSPERKSRRFAYPP 480 Query 500 NLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLL 559 NLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLL Sbjct 481 NLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLL 540 Query 560 QRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEI 619 QRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEI Sbjct 541 QRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEI 600 Query 620 TAVPGIGVATATAVHDALRPDSSGAAR 646 TAVPGIGVATATAVHDALRPDSSGAAR Sbjct 601 TAVPGIGVATATAVHDALRPDSSGAAR 627 >gi|289757527|ref|ZP_06516905.1| excinuclease ABC subunit C [Mycobacterium tuberculosis T85] gi|289713091|gb|EFD77103.1| excinuclease ABC subunit C [Mycobacterium tuberculosis T85] Length=586 Score = 1185 bits (3066), Expect = 0.0, Method: Compositional matrix adjust. Identities = 583/586 (99%), Positives = 585/586 (99%), Gaps = 0/586 (0%) Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 +TTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY Sbjct 1 MTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 60 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS Sbjct 61 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 120 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL Sbjct 121 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 180 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWI+EKPGEPGDSGI Sbjct 181 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIIEKPGEPGDSGI 240 Query 301 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 360 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV Sbjct 241 QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRV 300 Query 361 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 420 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV Sbjct 301 PRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDV 360 Query 421 SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 480 SHVQGTDVVGSLV FEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ Sbjct 361 SHVQGTDVVGSLVAFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ 420 Query 481 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 540 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV Sbjct 421 SDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWV 480 Query 541 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 600 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA Sbjct 481 PSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKA 540 Query 601 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR Sbjct 541 LVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 586 >gi|240171790|ref|ZP_04750449.1| excinuclease ABC subunit C [Mycobacterium kansasii ATCC 12478] Length=647 Score = 1174 bits (3036), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/646 (91%), Positives = 614/646 (96%), Gaps = 1/646 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRLTSYFADVA L PRTRQ+ Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDAHGRVIYVGKAKSLRSRLTSYFADVAHLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDKSYP LAVTL EEFPRLMVY Sbjct 61 VTTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPALAVTLNEEFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCS GVFKRH+QI+RPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSTGVFKRHKQIERPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A QHRQIV DFCDFLSG+TDR+AR LE+ M+AAAEQLDFERAARLRDDLSAL Sbjct 181 APCVGRVSAEQHRQIVEDFCDFLSGQTDRYARELERHMSAAAEQLDFERAARLRDDLSAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADV+AFADDELEAAVQVFHVRGGRVRGQRGWIVEK G+PGDSG Sbjct 241 KRAMEKQAVVLGDGTDADVMAFADDELEAAVQVFHVRGGRVRGQRGWIVEKSGDPGDSGE 300 Query 301 -QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLR 359 QLVEQFLTQFYG+QA L AADES NPVPREVLVPCLPSN+EEL+SWLSGLRGSRV LR Sbjct 301 EQLVEQFLTQFYGEQAELGSAADESVNPVPREVLVPCLPSNSEELSSWLSGLRGSRVTLR 360 Query 360 VPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVD 419 VPRRGDKRALAETV RNA++ALQQHKLKRA DFNARSAALQ+IQ++LGLADAPLRIECVD Sbjct 361 VPRRGDKRALAETVQRNAKEALQQHKLKRAGDFNARSAALQNIQEALGLADAPLRIECVD 420 Query 420 VSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRD 479 +SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVA IAEVTRRRFLRH+ D Sbjct 421 ISHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVASIAEVTRRRFLRHVSD 480 Query 480 QSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVW 539 QSDP+LLSPE KSRRFAYPPNLYVVDGGAPQVNAA AV+DELGV+DVAVIGLAKRLEEVW Sbjct 481 QSDPNLLSPEGKSRRFAYPPNLYVVDGGAPQVNAAKAVLDELGVSDVAVIGLAKRLEEVW 540 Query 540 VPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRK 599 VPSEPDP+IMPRNSEGLYLLQRVRDEAHRFAITYHRSKRS RMTASALD VPGLGEHRRK Sbjct 541 VPSEPDPVIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSKRMTASALDGVPGLGEHRRK 600 Query 600 ALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAA 645 ALVTHFGSIARLKEATVD+ITAVPGIGVATATAV +ALRPD S A+ Sbjct 601 ALVTHFGSIARLKEATVDQITAVPGIGVATATAVLEALRPDRSEAS 646 >gi|41407244|ref|NP_960080.1| excinuclease ABC subunit C [Mycobacterium avium subsp. paratuberculosis K-10] gi|81414507|sp|Q741E5.1|UVRC_MYCPA RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|41395595|gb|AAS03463.1| UvrC [Mycobacterium avium subsp. paratuberculosis K-10] Length=647 Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/646 (91%), Positives = 613/646 (95%), Gaps = 1/646 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRLTSYFADVA+L PRTRQ+ Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLTSYFADVANLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EEFPRLMVY Sbjct 61 VTTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRH+QIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV A QHRQIV DFCDFLSGKTDRFAR LEQQMNAAA +LDFERAARLRDDL AL Sbjct 181 APCIGRVSAEQHRQIVDDFCDFLSGKTDRFARELEQQMNAAAAELDFERAARLRDDLGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEK +PGDSG Sbjct 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKSADPGDSGE 300 Query 301 -QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLR 359 QLVEQFLTQFYG+QA L AADES NPVPREVLVPCLPSNA+EL SWLSGLRGSRV LR Sbjct 301 EQLVEQFLTQFYGEQAELGGAADESVNPVPREVLVPCLPSNADELTSWLSGLRGSRVALR 360 Query 360 VPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVD 419 VPRRGDKRALAETV RNA++ALQQHKLKRA DFNARSAALQ+IQ++LGL++APLRIECVD Sbjct 361 VPRRGDKRALAETVQRNAKEALQQHKLKRAGDFNARSAALQNIQEALGLSEAPLRIECVD 420 Query 420 VSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRD 479 +SHVQGTDVVGSLVVFEDGLPRKSDYRHF IREAAGQGRSDDVA IAEVTRRRF RHL + Sbjct 421 ISHVQGTDVVGSLVVFEDGLPRKSDYRHFAIREAAGQGRSDDVASIAEVTRRRFARHLSE 480 Query 480 QSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVW 539 Q+DP++LSPE KSRRFAYPPNLYVVDGGAPQVNAASAV++ELG+TDVAVIGLAKRLEEVW Sbjct 481 QNDPNMLSPEGKSRRFAYPPNLYVVDGGAPQVNAASAVLEELGITDVAVIGLAKRLEEVW 540 Query 540 VPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRK 599 VPSEPDP+IMPRNSEGLYLLQRVRDEAHRFAITYHRSKRS RMTAS LDSVPGLGEHRRK Sbjct 541 VPSEPDPVIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSKRMTASVLDSVPGLGEHRRK 600 Query 600 ALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAA 645 ALV+HFGSIARLKEATVD+ITAVPGIGVATATAV +ALRPD S AA Sbjct 601 ALVSHFGSIARLKEATVDQITAVPGIGVATATAVLEALRPDESKAA 646 >gi|296170712|ref|ZP_06852287.1| excision endonuclease subunit UvrC [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894701|gb|EFG74435.1| excision endonuclease subunit UvrC [Mycobacterium parascrofulaceum ATCC BAA-614] Length=650 Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust. Identities = 582/643 (91%), Positives = 613/643 (96%), Gaps = 1/643 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRP PGSIPVEPGVYRFRD +GRVIYVGKAKSLRSRLTSYFADVA L PRTRQ+ Sbjct 1 MPDPATYRPPPGSIPVEPGVYRFRDTYGRVIYVGKAKSLRSRLTSYFADVAGLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EEFPRLMVY Sbjct 61 VTTAAKVEWTVVTTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRH+QIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A QHRQIV DFCDFLSGKTDRFAR LEQ+MNAAAEQLDFERAARLRDDL AL Sbjct 181 APCVGRVSAEQHRQIVDDFCDFLSGKTDRFARELEQRMNAAAEQLDFERAARLRDDLGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPG+PGDSG Sbjct 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGDPGDSGE 300 Query 301 -QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLR 359 QLVEQFLTQFYG+QA L AADES NPVPREVLVPCLPSN+EEL SWLS LRGS+V LR Sbjct 301 EQLVEQFLTQFYGEQAELGGAADESVNPVPREVLVPCLPSNSEELTSWLSALRGSKVALR 360 Query 360 VPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVD 419 VPRRGDKRALAETV RNA++ALQQHKL+RA DFNARSAALQ+IQ++LGLADAPLRIECVD Sbjct 361 VPRRGDKRALAETVQRNAKEALQQHKLRRAGDFNARSAALQNIQEALGLADAPLRIECVD 420 Query 420 VSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRD 479 +SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVA IAEVTRRRF RHL + Sbjct 421 ISHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVASIAEVTRRRFARHLSE 480 Query 480 QSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVW 539 QSDP++LS E KSRRFAYPPNLYVVDGGAPQVNAASAV+++LG++DVAVIGLAKRLEE+W Sbjct 481 QSDPNMLSAEGKSRRFAYPPNLYVVDGGAPQVNAASAVLEDLGISDVAVIGLAKRLEEIW 540 Query 540 VPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRK 599 VPSEPDP+IMPRNSEGLYLLQR+RDEAHRFAITYHRSKRS RMTASALDSVPGLGEHRRK Sbjct 541 VPSEPDPVIMPRNSEGLYLLQRIRDEAHRFAITYHRSKRSKRMTASALDSVPGLGEHRRK 600 Query 600 ALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSS 642 ALVTHFGSIARLKEATVD+ITAVPGIGVATATAV +ALRP+SS Sbjct 601 ALVTHFGSIARLKEATVDQITAVPGIGVATATAVLEALRPESS 643 >gi|342858716|ref|ZP_08715371.1| excinuclease ABC subunit C [Mycobacterium colombiense CECT 3035] gi|342134420|gb|EGT87600.1| excinuclease ABC subunit C [Mycobacterium colombiense CECT 3035] Length=647 Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 584/647 (91%), Positives = 613/647 (95%), Gaps = 1/647 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRD +GRVIYVGKAKSLRSRLTSYFAD+ASL PRTRQ+ Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDPYGRVIYVGKAKSLRSRLTSYFADIASLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDK+YPVLAVTL EEFPRLMVY Sbjct 61 VTTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRH+QIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV A QHRQIV DFCDFLSGKTDRFAR LEQQMNAAAEQLDFERAARLRDDL A+ Sbjct 181 APCIGRVSAEQHRQIVDDFCDFLSGKTDRFARELEQQMNAAAEQLDFERAARLRDDLGAV 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEK +PGDSG Sbjct 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKSADPGDSGE 300 Query 301 -QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLR 359 QLVEQFLTQFYG+QA L AADES NPVPREVLVPCLPSNA EL SWLS LRGSRV LR Sbjct 301 EQLVEQFLTQFYGEQAELGGAADESVNPVPREVLVPCLPSNAGELTSWLSALRGSRVALR 360 Query 360 VPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVD 419 VP+RGDKRALAETV RNA++ALQQHKL+RA DFNARSAALQ+IQ++LGL+DAPLRIECVD Sbjct 361 VPQRGDKRALAETVQRNAKEALQQHKLRRAGDFNARSAALQNIQEALGLSDAPLRIECVD 420 Query 420 VSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRD 479 +SHVQGTDVVGSLVVFEDGLPRKSDYRHF IREAAGQGRSDDVA IAEVTRRRF RHL + Sbjct 421 ISHVQGTDVVGSLVVFEDGLPRKSDYRHFSIREAAGQGRSDDVASIAEVTRRRFARHLSE 480 Query 480 QSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVW 539 Q+DP++LSPE KSRRFAYPPNLYVVDGGAPQVNAASAV++ELG+TDVAVIGLAKRLEEVW Sbjct 481 QNDPNMLSPEGKSRRFAYPPNLYVVDGGAPQVNAASAVLEELGITDVAVIGLAKRLEEVW 540 Query 540 VPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRK 599 VPSEPDP+IMPRNSEGLYLLQRVRDEAHRFAITYHRSKRS RMTAS LDSVPGLGEHRRK Sbjct 541 VPSEPDPVIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSKRMTASVLDSVPGLGEHRRK 600 Query 600 ALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 ALV+HFGSIARLKEATVD+ITAVPGIGVATATAV +ALRPD S AAR Sbjct 601 ALVSHFGSIARLKEATVDQITAVPGIGVATATAVLEALRPDRSEAAR 647 >gi|254775803|ref|ZP_05217319.1| excinuclease ABC subunit C [Mycobacterium avium subsp. avium ATCC 25291] Length=647 Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust. Identities = 584/646 (91%), Positives = 612/646 (95%), Gaps = 1/646 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRLTSYFADVA+L PRTRQ+ Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLTSYFADVANLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EEFPRL+VY Sbjct 61 VTTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEFPRLIVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRH+QIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV A QHRQIV DFCDFLSGKTDRFAR LEQQMNAAA +LDFERAARLRDDL AL Sbjct 181 APCIGRVSAEQHRQIVDDFCDFLSGKTDRFARELEQQMNAAAAELDFERAARLRDDLGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEK +PGDSG Sbjct 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKSADPGDSGE 300 Query 301 -QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLR 359 QLVEQFLTQFYG+QA L AADES NPVPREVLVPCLPSNA+EL SWLSGLRGSRV LR Sbjct 301 EQLVEQFLTQFYGEQAELGGAADESVNPVPREVLVPCLPSNADELTSWLSGLRGSRVALR 360 Query 360 VPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVD 419 VPRRGDKRALAETV RNA++ALQQHKLKRA DFNARSAALQ+IQ++LGL++APLRIECVD Sbjct 361 VPRRGDKRALAETVQRNAKEALQQHKLKRAGDFNARSAALQNIQEALGLSEAPLRIECVD 420 Query 420 VSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRD 479 +SHVQGTDVVGSLVVFEDGLPRKSDYRHF IREAAGQGRSDDVA IAEVTRRRF RHL + Sbjct 421 ISHVQGTDVVGSLVVFEDGLPRKSDYRHFAIREAAGQGRSDDVASIAEVTRRRFARHLSE 480 Query 480 QSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVW 539 Q+DP++LSPE KSRRFAYPPNLYVVDGGAPQVNAASAV++ELG+TDVAVIGLAKRLEEVW Sbjct 481 QNDPNMLSPEGKSRRFAYPPNLYVVDGGAPQVNAASAVLEELGITDVAVIGLAKRLEEVW 540 Query 540 VPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRK 599 VPSEPDP+IMPRNSE LYLLQRVRDEAHRFAITYHRSKRS RMTAS LDSVPGLGEHRRK Sbjct 541 VPSEPDPVIMPRNSEELYLLQRVRDEAHRFAITYHRSKRSKRMTASVLDSVPGLGEHRRK 600 Query 600 ALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAA 645 ALV+HFGSIARLKEATVD+ITAVPGIGVATATAV +ALRPD S AA Sbjct 601 ALVSHFGSIARLKEATVDQITAVPGIGVATATAVLEALRPDESKAA 646 >gi|183982240|ref|YP_001850531.1| excinuclease ABC (subunit c-nuclease) UvrC [Mycobacterium marinum M] gi|229558460|sp|B2HP72.1|UVRC_MYCMM RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|183175566|gb|ACC40676.1| excinuclease ABC (subunit c-nuclease) UvrC [Mycobacterium marinum M] Length=647 Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/647 (90%), Positives = 606/647 (94%), Gaps = 1/647 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRLTSYFAD+A L PRTRQ+ Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLTSYFADIAHLQPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDKSYPVLAVTL E+FPRLMVY Sbjct 61 VTTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEDFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRET+DLLTRVFPARTCS GVFKRH+QIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETVDLLTRVFPARTCSMGVFKRHKQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV QHRQIV DFCDFLSGKTDR+AR LEQQMNAAAE LDFERAARLRDD SAL Sbjct 181 APCIGRVSKEQHRQIVDDFCDFLSGKTDRYARELEQQMNAAAENLDFERAARLRDDRSAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDS-G 299 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGW+VEKP P S Sbjct 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWVVEKPSAPDVSVE 300 Query 300 IQLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLR 359 QLVEQFL QFYGDQA L AADES NPVPREVLVPCLPSNA++L+SWLSGLRGSRV LR Sbjct 301 EQLVEQFLAQFYGDQAELGGAADESVNPVPREVLVPCLPSNADQLSSWLSGLRGSRVTLR 360 Query 360 VPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVD 419 VPRRGDKRALAETV RNA++ALQQHKLKRA DFNARSAALQ+IQ++LGLADAPLRIECVD Sbjct 361 VPRRGDKRALAETVQRNAKEALQQHKLKRAGDFNARSAALQNIQEALGLADAPLRIECVD 420 Query 420 VSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRD 479 +SHVQGTDVV SLVVFEDGLPRKSDYRHF IREAAGQGRSDDVA IAEVTRRRF RHL + Sbjct 421 ISHVQGTDVVASLVVFEDGLPRKSDYRHFAIREAAGQGRSDDVASIAEVTRRRFQRHLSE 480 Query 480 QSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVW 539 Q+DP+LLSPE KSRRFAYPPNLYVVDGGAPQVNAASAV++ELG+ DVAVIGLAKRLEEVW Sbjct 481 QNDPNLLSPEGKSRRFAYPPNLYVVDGGAPQVNAASAVLEELGIVDVAVIGLAKRLEEVW 540 Query 540 VPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRK 599 VPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRS RMTASALD+VPGLGEHRRK Sbjct 541 VPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSKRMTASALDAVPGLGEHRRK 600 Query 600 ALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAAR 646 ALVTHFGSIARLKEATVD+ITAVPGIGVATATAV +ALRPD G A+ Sbjct 601 ALVTHFGSIARLKEATVDQITAVPGIGVATATAVLEALRPDQPGGAQ 647 >gi|118463596|ref|YP_882542.1| excinuclease ABC subunit C [Mycobacterium avium 104] gi|118164883|gb|ABK65780.1| excinuclease ABC, C subunit [Mycobacterium avium 104] Length=628 Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust. Identities = 567/627 (91%), Positives = 594/627 (95%), Gaps = 1/627 (0%) Query 20 VYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTEVEAL 79 +YRFRD HGRVIYVGKAKSLRSRLTSYFADVA+L PRTRQ+VTTAAKVEWTVV TEVEAL Sbjct 1 MYRFRDPHGRVIYVGKAKSLRSRLTSYFADVANLHPRTRQMVTTAAKVEWTVVNTEVEAL 60 Query 80 QLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYSHAWA 139 QLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EEFPRLMVYRGPRRKGVRYFGPYSHAWA Sbjct 61 QLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEFPRLMVYRGPRRKGVRYFGPYSHAWA 120 Query 140 IRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVDAAQHRQIVADF 199 IRETLDLLTRVFPARTCSAGVFKRH+QIDRPCLLGYIDKCSAPCIGRV A QHRQIV DF Sbjct 121 IRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLLGYIDKCSAPCIGRVSAEQHRQIVDDF 180 Query 200 CDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGTDADV 259 CDFLSGKTDRFAR LEQQMNAAA +LDFERAARLRDDL ALKRAMEKQAVVLGDGTDADV Sbjct 181 CDFLSGKTDRFARELEQQMNAAAAELDFERAARLRDDLGALKRAMEKQAVVLGDGTDADV 240 Query 260 VAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI-QLVEQFLTQFYGDQAALD 318 VAFADDELEAAVQVFHVRGGRVRGQRGWIVEK +PGDSG QLVEQFLTQFYG+QA L Sbjct 241 VAFADDELEAAVQVFHVRGGRVRGQRGWIVEKSADPGDSGEEQLVEQFLTQFYGEQAELG 300 Query 319 DAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAE 378 AADES NPVPREVLVPCLPSNA+EL SWLSGLRGSRV LRVPRRGDKRALAETV RNA+ Sbjct 301 GAADESVNPVPREVLVPCLPSNADELTSWLSGLRGSRVALRVPRRGDKRALAETVQRNAK 360 Query 379 DALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDG 438 +ALQQHKLKRA DFNARSAALQ+IQ++LGL++APLRIECVD+SHVQGTDVVGSLVVFEDG Sbjct 361 EALQQHKLKRAGDFNARSAALQNIQEALGLSEAPLRIECVDISHVQGTDVVGSLVVFEDG 420 Query 439 LPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSDPDLLSPERKSRRFAYP 498 LPRKSDYRHF IREAAGQGRSDDVA IAEVTRRRF RHL +Q+DP++LSPE KSRRFAYP Sbjct 421 LPRKSDYRHFAIREAAGQGRSDDVASIAEVTRRRFARHLSEQNDPNMLSPEGKSRRFAYP 480 Query 499 PNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYL 558 PNLYVVDGGAPQVNAASAV++ELG+TDVAVIGLAKRLEEVWVPSEPDP+IMPRNSEGLYL Sbjct 481 PNLYVVDGGAPQVNAASAVLEELGITDVAVIGLAKRLEEVWVPSEPDPVIMPRNSEGLYL 540 Query 559 LQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDE 618 LQRVRDEAHRFAITYHRSKRS RMTAS LDSVPGLGEHRRKALV+HFGSIARLKEATVD+ Sbjct 541 LQRVRDEAHRFAITYHRSKRSKRMTASVLDSVPGLGEHRRKALVSHFGSIARLKEATVDQ 600 Query 619 ITAVPGIGVATATAVHDALRPDSSGAA 645 ITAVPGIGVATATAV +ALRPD S AA Sbjct 601 ITAVPGIGVATATAVLEALRPDESKAA 627 >gi|254822013|ref|ZP_05227014.1| excinuclease ABC subunit C [Mycobacterium intracellulare ATCC 13950] Length=636 Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 564/628 (90%), Positives = 595/628 (95%), Gaps = 1/628 (0%) Query 16 VEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTE 75 +EPGVYRFRD HGRVIYVGKAKSLRSRLTSYF+D++ L PRTRQ+VTTAAKVEWTVV TE Sbjct 1 MEPGVYRFRDPHGRVIYVGKAKSLRSRLTSYFSDISGLHPRTRQMVTTAAKVEWTVVNTE 60 Query 76 VEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYS 135 VEALQLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EEFPRLMVYRGPRRKGVRYFGPYS Sbjct 61 VEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEFPRLMVYRGPRRKGVRYFGPYS 120 Query 136 HAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVDAAQHRQI 195 HAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRV A QHRQI Sbjct 121 HAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVSAEQHRQI 180 Query 196 VADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGT 255 V DFCDFLSGKTDRFAR LEQQMNAAAE+LDFERAARLRDDL ALKRAMEKQAVVLGDGT Sbjct 181 VDDFCDFLSGKTDRFARELEQQMNAAAERLDFERAARLRDDLGALKRAMEKQAVVLGDGT 240 Query 256 DADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI-QLVEQFLTQFYGDQ 314 DADVVAFADD+LEAAVQVFHVRGGRVRGQRGWIVEK +PGDSG QLVEQFLTQFYG+Q Sbjct 241 DADVVAFADDDLEAAVQVFHVRGGRVRGQRGWIVEKSADPGDSGEEQLVEQFLTQFYGEQ 300 Query 315 AALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVH 374 A L AADES NPVPREVLVPCLPSNA+EL SWLSGLRGSRVVLRVPRRGDKRALAETV Sbjct 301 AELGGAADESVNPVPREVLVPCLPSNADELTSWLSGLRGSRVVLRVPRRGDKRALAETVQ 360 Query 375 RNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVV 434 RNA++ALQQHKLKRA DFNARSAALQ+IQ++LGL++APLRIECVD+SHVQGTDVVGSLVV Sbjct 361 RNAKEALQQHKLKRAGDFNARSAALQNIQEALGLSEAPLRIECVDISHVQGTDVVGSLVV 420 Query 435 FEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSDPDLLSPERKSRR 494 FEDGLPRKSDYRHF IREAAGQGRSDDVA IAEVTRRRF RHL +Q+DP++LSPE KSRR Sbjct 421 FEDGLPRKSDYRHFSIREAAGQGRSDDVASIAEVTRRRFARHLSEQNDPNMLSPEGKSRR 480 Query 495 FAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSE 554 FAYPPNLYVVDGGAPQVNAASAV++ LG+TDVAVIGLAKRLEEVWVPSEPDP+IMPRNSE Sbjct 481 FAYPPNLYVVDGGAPQVNAASAVLEGLGITDVAVIGLAKRLEEVWVPSEPDPVIMPRNSE 540 Query 555 GLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEA 614 GLYLLQRVRDEAHRFAI YHRSKRS RMTAS LDSVPGLGEHRRKALV+HFGSIARLKEA Sbjct 541 GLYLLQRVRDEAHRFAIAYHRSKRSKRMTASVLDSVPGLGEHRRKALVSHFGSIARLKEA 600 Query 615 TVDEITAVPGIGVATATAVHDALRPDSS 642 TVD+ITAVPGIGVATATAV +ALRP+ + Sbjct 601 TVDQITAVPGIGVATATAVLEALRPEQA 628 >gi|15827213|ref|NP_301476.1| excinuclease ABC subunit C [Mycobacterium leprae TN] gi|221229691|ref|YP_002503107.1| excinuclease ABC subunit C [Mycobacterium leprae Br4923] gi|21264123|sp|Q9CCP1.1|UVRC_MYCLE RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|254764939|sp|B8ZUN5.1|UVRC_MYCLB RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|13092761|emb|CAC30070.1| putative excinuclease ABC subunit C [Mycobacterium leprae] gi|219932798|emb|CAR70655.1| putative excinuclease ABC subunit C [Mycobacterium leprae Br4923] Length=647 Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 566/646 (88%), Positives = 603/646 (94%), Gaps = 1/646 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPA GSIPVEPGVYRFRD +GRVIYVGKAKSLRSRL SYFADVA+L PRTRQ+ Sbjct 1 MPDPATYRPATGSIPVEPGVYRFRDPYGRVIYVGKAKSLRSRLASYFADVANLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VT AAKVEWTVV TEVEALQLEY WIKEFDPRFN+RYRDDKSYPVLAVTLGEEFPRLMVY Sbjct 61 VTIAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNIRYRDDKSYPVLAVTLGEEFPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCS GVFKRH+QIDRPCLLGYIDKC+ Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSPGVFKRHKQIDRPCLLGYIDKCA 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A QH QIVADFCDFLSGKTDR+AR LE++M+AAAEQLDFERAARLRDDL AL Sbjct 181 APCVGRVGAEQHSQIVADFCDFLSGKTDRYARDLERKMSAAAEQLDFERAARLRDDLFAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 KRAMEKQAVV GDGTDADVVAFA DELE AVQVFHVRGGRVRGQRGWIVEK +PGD+G Sbjct 241 KRAMEKQAVVFGDGTDADVVAFAYDELEVAVQVFHVRGGRVRGQRGWIVEKSDDPGDTGE 300 Query 301 -QLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLR 359 QLVEQFL QFYG+QA LD ADESANPVPREVLVPCLPSNA+ELASWLSGLRGSRV LR Sbjct 301 EQLVEQFLAQFYGEQAELDFVADESANPVPREVLVPCLPSNADELASWLSGLRGSRVALR 360 Query 360 VPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVD 419 VPRRGDKRALAETV RNA++ LQQHKLKRASDFN+RSAALQ+IQD+LGL+ APLRIECVD Sbjct 361 VPRRGDKRALAETVQRNAKEELQQHKLKRASDFNSRSAALQNIQDTLGLSYAPLRIECVD 420 Query 420 VSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRD 479 +SHVQGTDVVGSLVVFEDGLPRKSDYRHFGIR+AAG GRSDDVA IAEVTRRRFL+HL D Sbjct 421 ISHVQGTDVVGSLVVFEDGLPRKSDYRHFGIRKAAGNGRSDDVASIAEVTRRRFLQHLHD 480 Query 480 QSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVW 539 Q+D +LLSPE KS RFAYPPNLYVVDGGAPQVNAAS V++ELG+ DVAVIGLAKRLEEVW Sbjct 481 QNDTNLLSPEGKSHRFAYPPNLYVVDGGAPQVNAASTVLEELGIIDVAVIGLAKRLEEVW 540 Query 540 VPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRK 599 VP EP P+IMPRNSE L+LLQRVRDEAHRFAITYHRSKRS RMTASALDSVPGLG HRRK Sbjct 541 VPFEPYPVIMPRNSEALFLLQRVRDEAHRFAITYHRSKRSKRMTASALDSVPGLGAHRRK 600 Query 600 ALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGAA 645 ALVTHFGSIARLK+ATV++ITAVPGIGVATATAV +ALRPDSS A+ Sbjct 601 ALVTHFGSIARLKDATVEQITAVPGIGVATATAVLEALRPDSSEAS 646 >gi|336461608|gb|EGO40473.1| excinuclease ABC, C subunit [Mycobacterium avium subsp. paratuberculosis S397] Length=628 Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust. Identities = 565/627 (91%), Positives = 592/627 (95%), Gaps = 1/627 (0%) Query 20 VYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTEVEAL 79 +YRFRD HGRVIYVGKAKSLRSRLTSYFADVA+L PRTRQ+VTTAAKVEWTVV TEVEAL Sbjct 1 MYRFRDPHGRVIYVGKAKSLRSRLTSYFADVANLHPRTRQMVTTAAKVEWTVVNTEVEAL 60 Query 80 QLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYSHAWA 139 QLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EEFPRLMVYRGPRRKGVRYFGPYSHAWA Sbjct 61 QLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEFPRLMVYRGPRRKGVRYFGPYSHAWA 120 Query 140 IRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVDAAQHRQIVADF 199 IRETLDLLTRVFPARTCSAGVFKRH+QIDRPCLLGYIDKCSAPCIGRV A QHRQIV DF Sbjct 121 IRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLLGYIDKCSAPCIGRVSAEQHRQIVDDF 180 Query 200 CDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGTDADV 259 CDFLSGKTDRFAR LEQQMNAAA +LDFERAARLRDDL ALKRAMEKQAVVLGDGTDADV Sbjct 181 CDFLSGKTDRFARELEQQMNAAAAELDFERAARLRDDLGALKRAMEKQAVVLGDGTDADV 240 Query 260 VAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI-QLVEQFLTQFYGDQAALD 318 VAFADDELEAAVQVFHVRGGRVRGQRGWIVEK +PGDSG QLVEQFLTQFYG+QA L Sbjct 241 VAFADDELEAAVQVFHVRGGRVRGQRGWIVEKSADPGDSGEEQLVEQFLTQFYGEQAELG 300 Query 319 DAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAE 378 AADES NPVPREVLVPCLPSNA+EL SWLSGLRGSRV LRVPRR DKRALAETV RNA+ Sbjct 301 GAADESVNPVPREVLVPCLPSNADELTSWLSGLRGSRVALRVPRRDDKRALAETVQRNAK 360 Query 379 DALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDG 438 +ALQQHKLKRA DFNARSAALQ+IQ++LGL++APLRIECVD+SHVQGTDVVGSLVVFEDG Sbjct 361 EALQQHKLKRAGDFNARSAALQNIQEALGLSEAPLRIECVDISHVQGTDVVGSLVVFEDG 420 Query 439 LPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSDPDLLSPERKSRRFAYP 498 LPRKSDYRHF IREAAGQGRSDDVA IAEVTRRRF RHL +Q+DP++LSPE KSRRFAYP Sbjct 421 LPRKSDYRHFAIREAAGQGRSDDVASIAEVTRRRFARHLSEQNDPNMLSPEGKSRRFAYP 480 Query 499 PNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYL 558 PNLYVVDGGAPQVNAASAV++ELG+TDVAVIGLAKRLEEVWVPSEPDP+IMPRNSEGLYL Sbjct 481 PNLYVVDGGAPQVNAASAVLEELGITDVAVIGLAKRLEEVWVPSEPDPVIMPRNSEGLYL 540 Query 559 LQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDE 618 LQRVRDEAHRFAITYHRSKRS RMTAS LDSVPGLGEHRRKALV+HFGSI RLKEATVD+ Sbjct 541 LQRVRDEAHRFAITYHRSKRSKRMTASVLDSVPGLGEHRRKALVSHFGSIVRLKEATVDQ 600 Query 619 ITAVPGIGVATATAVHDALRPDSSGAA 645 ITAVPGIGVATATAV +ALRPD S AA Sbjct 601 ITAVPGIGVATATAVLEALRPDESKAA 627 >gi|118617429|ref|YP_905761.1| excinuclease ABC subunit C [Mycobacterium ulcerans Agy99] gi|118569539|gb|ABL04290.1| excinuclease ABC (subunit c-nuclease) UvrC [Mycobacterium ulcerans Agy99] Length=628 Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 560/628 (90%), Positives = 587/628 (94%), Gaps = 1/628 (0%) Query 20 VYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTEVEAL 79 +YRFRD HGRVIYVGKAKSLRSRLTSYFAD+A L PRTRQ+VTTAAKVEWTVV TEVEAL Sbjct 1 MYRFRDPHGRVIYVGKAKSLRSRLTSYFADIAHLQPRTRQMVTTAAKVEWTVVNTEVEAL 60 Query 80 QLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYSHAWA 139 QLEY WIKEFDPRFNVRYRDDKSYPVLAVTL E+FPRLMVYRGPRRKGVRYFGPYSHAWA Sbjct 61 QLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEDFPRLMVYRGPRRKGVRYFGPYSHAWA 120 Query 140 IRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVDAAQHRQIVADF 199 IRET+DLLTRVFPARTCS GVFKRH+QIDRPCLLGYIDKCSAPCIGRV QHRQIV DF Sbjct 121 IRETVDLLTRVFPARTCSMGVFKRHKQIDRPCLLGYIDKCSAPCIGRVSKEQHRQIVDDF 180 Query 200 CDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGTDADV 259 CDFLSGKTDR+AR LEQQMNAAAE LDFERAARLRDD SALKRAMEKQAVVLGDGTDADV Sbjct 181 CDFLSGKTDRYARELEQQMNAAAENLDFERAARLRDDRSALKRAMEKQAVVLGDGTDADV 240 Query 260 VAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDS-GIQLVEQFLTQFYGDQAALD 318 VAFADDELEAAVQVFHVRGGRVRGQRGW+VEKP P S QLVEQFL QFYGDQA L Sbjct 241 VAFADDELEAAVQVFHVRGGRVRGQRGWVVEKPSAPDVSVEEQLVEQFLAQFYGDQAELG 300 Query 319 DAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAE 378 AADES NPVPREVLVPCLPSNA++L+SWLSGLRGSRV LRVPRRGDKRALAETV RNA+ Sbjct 301 GAADESVNPVPREVLVPCLPSNADQLSSWLSGLRGSRVTLRVPRRGDKRALAETVQRNAK 360 Query 379 DALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDG 438 +ALQQHKLKRA DFNARSAALQ+IQ++LGLADAPLRIECVD+SHVQGTDVV SLVVFEDG Sbjct 361 EALQQHKLKRAGDFNARSAALQNIQEALGLADAPLRIECVDISHVQGTDVVASLVVFEDG 420 Query 439 LPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSDPDLLSPERKSRRFAYP 498 LPRKSDYRHF IREAAGQGRSDDVA IAEVTRRRF RHL +Q+DP+LLSPE KSRRFAYP Sbjct 421 LPRKSDYRHFAIREAAGQGRSDDVASIAEVTRRRFQRHLSEQNDPNLLSPEGKSRRFAYP 480 Query 499 PNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYL 558 PNLYVVDGGAPQVNAASAV++ELG+ DVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYL Sbjct 481 PNLYVVDGGAPQVNAASAVLEELGIVDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYL 540 Query 559 LQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDE 618 LQRVRDEAHRFAITYHRSKRS RMTASALD+VPGLGEHRRKALVTHFGSIARLKEATVD+ Sbjct 541 LQRVRDEAHRFAITYHRSKRSKRMTASALDAVPGLGEHRRKALVTHFGSIARLKEATVDQ 600 Query 619 ITAVPGIGVATATAVHDALRPDSSGAAR 646 ITAVPGIGVATATAV +ALRPD G A+ Sbjct 601 ITAVPGIGVATATAVLEALRPDQPGGAQ 628 >gi|118472646|ref|YP_887394.1| excinuclease ABC subunit C [Mycobacterium smegmatis str. MC2 155] gi|189038068|sp|A0QWV6.1|UVRC_MYCS2 RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|118173933|gb|ABK74829.1| excinuclease ABC, C subunit [Mycobacterium smegmatis str. MC2 155] Length=706 Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/651 (85%), Positives = 587/651 (91%), Gaps = 17/651 (2%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRLTSYFAD+ SLAPRTRQ+ Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLTSYFADITSLAPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 V TA VEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EE+PRLMVY Sbjct 61 VMTAGSVEWTVVTTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEYPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRH+QIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A QHRQIV DFCDFL GKTDR A+ +EQQM AAAEQLDFERAARLRDD+SAL Sbjct 181 APCVGRVSAEQHRQIVLDFCDFLGGKTDRLAKDMEQQMTAAAEQLDFERAARLRDDISAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEP---GD 297 KRA+EKQAVV GDGTDADVVAFADD+LEAAVQVFHVRGGRVRGQRGWIVEK EP GD Sbjct 241 KRALEKQAVVFGDGTDADVVAFADDDLEAAVQVFHVRGGRVRGQRGWIVEKSSEPAATGD 300 Query 298 SGI------QLVEQFLTQFYGDQAAL----DDAADESANPVPREVLVPCLPSNAEELASW 347 + + QLVEQFLTQFYG+QA L D DE+ NPVPR+VLVP LP NA+ELA+W Sbjct 301 ADLGQSGQEQLVEQFLTQFYGEQAELGSASDTGGDEATNPVPRQVLVPVLPPNADELATW 360 Query 348 LSGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLG 407 LSGLRGSRV LRVP RGDKRALAETV RNA++AL QHKLKRA DFNARS ALQSIQ++LG Sbjct 361 LSGLRGSRVSLRVPVRGDKRALAETVQRNAQEALAQHKLKRAGDFNARSEALQSIQEALG 420 Query 408 LADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAE 467 LADAPLRIECVD+SHVQGTDVV SLVVFEDGLPRKSDYRH+ IREAAG GRSDDVA IAE Sbjct 421 LADAPLRIECVDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIREAAGDGRSDDVASIAE 480 Query 468 VTRRRFLRHLRD-QSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDV 526 VTRRRFLRH D Q DP S E++ RRFAYPPNL+VVDGGAPQVNAA+AV+++LGV DV Sbjct 481 VTRRRFLRHTSDSQPDP---SAEQRPRRFAYPPNLFVVDGGAPQVNAAAAVLEDLGVDDV 537 Query 527 AVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASA 586 AVIGLAKRLEEVWVPSEPDP+I+PRNSEGLYLLQRVRDEAHRFAI+YHRSKRS RMTASA Sbjct 538 AVIGLAKRLEEVWVPSEPDPVILPRNSEGLYLLQRVRDEAHRFAISYHRSKRSKRMTASA 597 Query 587 LDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDAL 637 LDSV GLGEHRRKALV HFGS+ARLKEATVDEITAVPGIGVATA AV +AL Sbjct 598 LDSVRGLGEHRRKALVAHFGSVARLKEATVDEITAVPGIGVATARAVQEAL 648 >gi|333990922|ref|YP_004523536.1| excinuclease ABC (subunit c-nuclease) UvrC [Mycobacterium sp. JDM601] gi|333486890|gb|AEF36282.1| excinuclease ABC (subunit c-nuclease) UvrC [Mycobacterium sp. JDM601] Length=652 Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/649 (84%), Positives = 592/649 (92%), Gaps = 8/649 (1%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRF D HGRVIYVGKAKSLRSRLTSYFADVA L PRTRQ+ Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFVDPHGRVIYVGKAKSLRSRLTSYFADVAGLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAAKVEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDK+YPVLAVTL EE+PRLMVY Sbjct 61 VTTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEYPRLMVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLL RVFPARTCSAGVFKRH+QI RPCLLGYI KC+ Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSAGVFKRHQQIGRPCLLGYIGKCA 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV A +HR+IV DFCDFL+GKTDR R+LEQQM AA+++LDFERAARLRDD++AL Sbjct 181 APCIGRVSAEEHRRIVDDFCDFLAGKTDRLVRSLEQQMLAASDELDFERAARLRDDVAAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGD--- 297 KRA+EKQAVVLGDGTDADVVAFA+DELEAAVQVFHVRGGRVRGQRGWIVEKPG+ GD Sbjct 241 KRALEKQAVVLGDGTDADVVAFAEDELEAAVQVFHVRGGRVRGQRGWIVEKPGDTGDAES 300 Query 298 SGIQLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVV 357 S +LVEQF+TQFYGDQA L+ AADE ANPVPREVLVPCLP N +EL SWL LRGSRV Sbjct 301 SLERLVEQFVTQFYGDQAELEGAADEPANPVPREVLVPCLPGNVDELTSWLCELRGSRVS 360 Query 358 LRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIEC 417 LRVP RGDKRALAETV RNA+DALQQHKLKRA DF ARSAALQ+IQ++LGLADAPLRIEC Sbjct 361 LRVPMRGDKRALAETVERNAKDALQQHKLKRAGDFTARSAALQNIQEALGLADAPLRIEC 420 Query 418 VDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHL 477 VD+SHVQGTDVVGSLVVFEDGLPRKSDYRHF IREAAGQGRSDDVA IAEVTRRRF RHL Sbjct 421 VDISHVQGTDVVGSLVVFEDGLPRKSDYRHFAIREAAGQGRSDDVASIAEVTRRRFRRHL 480 Query 478 RDQSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEE 537 D ++L+PE KSR+FAYPPNLYVVDGGAPQVNAA+AV+ ELG+TDVA IGLAKRLEE Sbjct 481 ----DTEVLAPEGKSRKFAYPPNLYVVDGGAPQVNAAAAVLAELGITDVATIGLAKRLEE 536 Query 538 VWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHR 597 VWVPSEPDP+I+PR SEGLYLLQR+RDEAHRFAITYHRSKRS RMTAS LD+VPGLGEHR Sbjct 537 VWVPSEPDPVILPRQSEGLYLLQRIRDEAHRFAITYHRSKRSKRMTASVLDAVPGLGEHR 596 Query 598 RKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPD-SSGAA 645 RK L++HFGS+ARLK ATV+E+T++PGIG ATA AV +AL D ++GAA Sbjct 597 RKVLISHFGSVARLKRATVEELTSIPGIGAATAAAVLEALGADGATGAA 645 >gi|126435020|ref|YP_001070711.1| excinuclease ABC subunit C [Mycobacterium sp. JLS] gi|189038069|sp|A3PZ93.1|UVRC_MYCSJ RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|126234820|gb|ABN98220.1| Excinuclease ABC subunit C [Mycobacterium sp. JLS] Length=676 Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/650 (84%), Positives = 580/650 (90%), Gaps = 13/650 (2%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDP+TYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRL SYFAD++ LAPRTRQ+ Sbjct 1 MPDPSTYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADLSGLAPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 V TAAKVEWTVV TEVEALQLEY WIKEFDPRFN+RYRDDKSYPVLAVTL EEFPRL VY Sbjct 61 VMTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNIRYRDDKSYPVLAVTLNEEFPRLKVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPR+KGVRYFGPYSHAWAIRET+DLLTRVFPARTCSAGVFKRH QIDRPCLLGYIDKCS Sbjct 121 RGPRKKGVRYFGPYSHAWAIRETVDLLTRVFPARTCSAGVFKRHNQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A QHRQIV DFCDFL+GKTDR R LE++M AAAE LDFERAARLRDD+ AL Sbjct 181 APCVGRVSAEQHRQIVLDFCDFLAGKTDRLVRDLERKMTAAAEDLDFERAARLRDDIGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 +RA+EKQ VV GDGTDADVVAFADD+LEAAVQVFHVRGGRVRGQRGWIVEK GEPG+SG Sbjct 241 RRALEKQTVVFGDGTDADVVAFADDDLEAAVQVFHVRGGRVRGQRGWIVEKSGEPGESGE 300 Query 301 -QLVEQFLTQFYGDQAAL--------DDAADESANPVPREVLVPCLPSNAEELASWLSGL 351 QLVEQFLTQFYGDQA L D DE+ NPVPR+VLVPCLP NA+EL WLS L Sbjct 301 GQLVEQFLTQFYGDQAELGSAGDNAGDSGQDEATNPVPRQVLVPCLPDNADELTEWLSQL 360 Query 352 RGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADA 411 RGSRV LRVP+RGDK+AL ETV RNA++AL QHKLKRA DF AR+AALQSIQD+LGLADA Sbjct 361 RGSRVALRVPQRGDKKALFETVQRNAKEALAQHKLKRAGDFTARTAALQSIQDTLGLADA 420 Query 412 PLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRR 471 PLRIEC+D+SHVQGTDVV SLVVFEDGLPRKSDYRH+ IREAAG GRSDDVA IAEVTRR Sbjct 421 PLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIREAAGDGRSDDVASIAEVTRR 480 Query 472 RFLRHLRDQSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGL 531 RF RHL D P LS E KSR+FAYPPNL+VVDGGAPQVNAA AV+DELG++DVAVIGL Sbjct 481 RFYRHLHDTQHPTELSAEGKSRKFAYPPNLFVVDGGAPQVNAAQAVLDELGISDVAVIGL 540 Query 532 AKRLEEVWVPS----EPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASAL 587 AKRLEEVWVPS P+PII+PRNSEGLYLLQRVRDEAHRFAITYHRSKRS RMTASAL Sbjct 541 AKRLEEVWVPSGSDLGPEPIILPRNSEGLYLLQRVRDEAHRFAITYHRSKRSKRMTASAL 600 Query 588 DSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDAL 637 DSV GLGEHRRKALVTHFGS+ARLKEA+V+EITAVPGIGV TA AV +AL Sbjct 601 DSVRGLGEHRRKALVTHFGSVARLKEASVEEITAVPGIGVTTARAVLEAL 650 >gi|108799362|ref|YP_639559.1| excinuclease ABC subunit C [Mycobacterium sp. MCS] gi|119868478|ref|YP_938430.1| excinuclease ABC subunit C [Mycobacterium sp. KMS] gi|119367675|sp|Q1B9D1.1|UVRC_MYCSS RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|189038070|sp|A1UFN2.1|UVRC_MYCSK RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|108769781|gb|ABG08503.1| Excinuclease ABC subunit C [Mycobacterium sp. MCS] gi|119694567|gb|ABL91640.1| Excinuclease ABC subunit C [Mycobacterium sp. KMS] Length=676 Score = 1072 bits (2773), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/650 (84%), Positives = 580/650 (90%), Gaps = 13/650 (2%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDP+TYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRL SYFAD++ LAPRTRQ+ Sbjct 1 MPDPSTYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADLSGLAPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 V TAAKVEWTVV TEVEALQLEY WIKEFDPRFN+RYRDDKSYPVLAVTL EEFPRL VY Sbjct 61 VMTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNIRYRDDKSYPVLAVTLNEEFPRLKVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPR+KGVRYFGPYSHAWAIRET+DLLTRVFPARTCSAGVFKRH QIDRPCLLGYIDKCS Sbjct 121 RGPRKKGVRYFGPYSHAWAIRETVDLLTRVFPARTCSAGVFKRHNQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A QHRQIV DFCDFL+GKTDR R LE++M AAAE LDFERAARLRDD+ AL Sbjct 181 APCVGRVSAEQHRQIVLDFCDFLAGKTDRLVRDLERKMTAAAEDLDFERAARLRDDIGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 +RA+EKQ VV GDGTDADVVAFADD+LEAAVQVFHVRGGRVRGQRGWIVEK GEPG+SG Sbjct 241 RRALEKQTVVFGDGTDADVVAFADDDLEAAVQVFHVRGGRVRGQRGWIVEKSGEPGESGE 300 Query 301 -QLVEQFLTQFYGDQAAL--------DDAADESANPVPREVLVPCLPSNAEELASWLSGL 351 QLVEQFLTQFYGDQA L D DE+ NPVPR+VLVPCLP NA+EL WLS L Sbjct 301 GQLVEQFLTQFYGDQAELGSAGDNAGDSGQDEATNPVPRQVLVPCLPDNADELTEWLSQL 360 Query 352 RGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADA 411 RGSRV LRVP+RGDK+AL ETV RNA++AL QHKLKRA DF AR+AALQSIQD+LGLADA Sbjct 361 RGSRVALRVPQRGDKKALFETVQRNAKEALAQHKLKRAGDFTARTAALQSIQDTLGLADA 420 Query 412 PLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRR 471 PLRIEC+D+SHVQGTDVV SLVVFEDGLPRKSDYRH+ IREAAG GRSDDVA IAEVTRR Sbjct 421 PLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIREAAGDGRSDDVASIAEVTRR 480 Query 472 RFLRHLRDQSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGL 531 RF RHL D P LS E KSR+FAYPPNL+VVDGGAPQVNAA AV+DELG++DVAVIGL Sbjct 481 RFYRHLHDTQHPTELSAEGKSRKFAYPPNLFVVDGGAPQVNAAQAVLDELGISDVAVIGL 540 Query 532 AKRLEEVWVPS----EPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASAL 587 AKRLEEVWVPS P+PII+PRNSEGLYLLQRVRDEAHRFAITYHRSKRS RMTASAL Sbjct 541 AKRLEEVWVPSGSDLGPEPIILPRNSEGLYLLQRVRDEAHRFAITYHRSKRSKRMTASAL 600 Query 588 DSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDAL 637 DSV GLGEHRRKALVTHFGS+ARLKEA+V+EITAVPGIGV TA AV +AL Sbjct 601 DSVRGLGEHRRKALVTHFGSVARLKEASVEEITAVPGIGVTTARAVLEAL 650 >gi|145224297|ref|YP_001134975.1| excinuclease ABC subunit C [Mycobacterium gilvum PYR-GCK] gi|315444630|ref|YP_004077509.1| excinuclease ABC subunit C [Mycobacterium sp. Spyr1] gi|189038067|sp|A4TC09.1|UVRC_MYCGI RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|145216783|gb|ABP46187.1| Excinuclease ABC subunit C [Mycobacterium gilvum PYR-GCK] gi|315262933|gb|ADT99674.1| Excinuclease ABC subunit C [Mycobacterium sp. Spyr1] Length=678 Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust. Identities = 532/646 (83%), Positives = 577/646 (90%), Gaps = 9/646 (1%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPATYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRL SYFAD++ LAPRTRQ+ Sbjct 1 MPDPATYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADISGLAPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 V TA+ VEWTVVGTEVEALQLEY WIKEFDPRFN+RYRDDKSYPVLAVTL EE+PRL VY Sbjct 61 VMTASSVEWTVVGTEVEALQLEYNWIKEFDPRFNIRYRDDKSYPVLAVTLNEEYPRLKVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRET+DLLTRVFPARTCS GVFKRH QIDRPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETVDLLTRVFPARTCSNGVFKRHSQIDRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A QHRQIV DFCDFL+GKTDR R +EQQM AAAE LDFERAARLRD++ A+ Sbjct 181 APCVGRVSAEQHRQIVQDFCDFLAGKTDRLIREMEQQMTAAAEDLDFERAARLRDNIGAM 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 +RAMEKQ VVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGW++EK GEPG+S + Sbjct 241 RRAMEKQTVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWVIEKSGEPGESTL 300 Query 301 Q-LVEQFLTQFYGDQAAL----DDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSR 355 + LVEQFLTQFYGDQA L D DE++NPVP++VLVP LP +EL +WLS LRGSR Sbjct 301 EYLVEQFLTQFYGDQAELGGASDAGGDEASNPVPKQVLVPVLPETTDELETWLSQLRGSR 360 Query 356 VVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRI 415 V LRVP+RGDKRALAETV RNAE AL QHKLKRA DF ARSAALQSIQ++LGL DAPLRI Sbjct 361 VALRVPQRGDKRALAETVKRNAEGALNQHKLKRAGDFTARSAALQSIQENLGLQDAPLRI 420 Query 416 ECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLR 475 EC+D+SHVQGTDVV SLVVFEDGLPRKSDYRHF IREAAG GRSDDVA IAEVTRRRF R Sbjct 421 ECIDISHVQGTDVVASLVVFEDGLPRKSDYRHFAIREAAGDGRSDDVASIAEVTRRRFHR 480 Query 476 HLRDQSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRL 535 HLRD +P + E +SRRFAYPPNL+VVDGGAPQVNAA AV+D+LG++DVAVIGLAKRL Sbjct 481 HLRDMQEPGEMVAEGRSRRFAYPPNLFVVDGGAPQVNAAQAVLDDLGISDVAVIGLAKRL 540 Query 536 EEVWVP----SEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVP 591 EEVWVP + PDPII PRNS+GLYLLQRVRDEAHRFAI+YHRSKRS RMTASALDSV Sbjct 541 EEVWVPNLDGTAPDPIIFPRNSDGLYLLQRVRDEAHRFAISYHRSKRSKRMTASALDSVR 600 Query 592 GLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDAL 637 GLGEHRRKALVTHFGS+ARLK+ATV+EIT VPGIG ATA AV DAL Sbjct 601 GLGEHRRKALVTHFGSLARLKQATVEEITEVPGIGAATARAVLDAL 646 >gi|120403681|ref|YP_953510.1| excinuclease ABC subunit C [Mycobacterium vanbaalenii PYR-1] gi|189038072|sp|A1T8K4.1|UVRC_MYCVP RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|119956499|gb|ABM13504.1| Excinuclease ABC subunit C [Mycobacterium vanbaalenii PYR-1] Length=678 Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/665 (81%), Positives = 579/665 (88%), Gaps = 21/665 (3%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDP+TYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRL SYFAD++ LAPRTRQ+ Sbjct 1 MPDPSTYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADLSGLAPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 V TAA VEWTVV TEVEALQLEY WIKEFDPRFN+RYRDDKSYPVLAVTL EE+PRL VY Sbjct 61 VMTAASVEWTVVSTEVEALQLEYNWIKEFDPRFNIRYRDDKSYPVLAVTLNEEYPRLKVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCS GVFKRH QIDRPCLLGYIDKC+ Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSNGVFKRHSQIDRPCLLGYIDKCA 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A +HR+IV DFCDFL+GKTDR R +EQQMNAAAE+LDFERAARLRD++ A+ Sbjct 181 APCVGRVSAEEHRRIVLDFCDFLAGKTDRLIREMEQQMNAAAEELDFERAARLRDNIGAM 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSG- 299 +RAMEKQ VVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGW++EK GEPG+S Sbjct 241 RRAMEKQTVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWVIEKSGEPGESTP 300 Query 300 IQLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLR 359 LVEQFLTQFYGDQA L AADE+ NPVPR+VLVP LP EEL +WLS LRGSRV LR Sbjct 301 AYLVEQFLTQFYGDQAELGGAADEATNPVPRQVLVPVLPDTTEELETWLSQLRGSRVSLR 360 Query 360 VPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVD 419 VP+RGDKRALAETV RNAE AL QHKLKRA DF ARSAALQSIQ++LGLADAPLRIECVD Sbjct 361 VPQRGDKRALAETVKRNAEQALTQHKLKRAGDFTARSAALQSIQEALGLADAPLRIECVD 420 Query 420 VSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRD 479 +SHVQGTDVV SLVVFEDGLPRKSDYRHF IREAAG GRSDDVA IAEVTRRRF RHLRD Sbjct 421 ISHVQGTDVVASLVVFEDGLPRKSDYRHFAIREAAGDGRSDDVASIAEVTRRRFHRHLRD 480 Query 480 QSDPDLLSPERKSR----------------RFAYPPNLYVVDGGAPQVNAASAVIDELGV 523 PE+ R RFAYPPNL+VVDGGAPQVNAA+AV+DELG+ Sbjct 481 AEAAPEGRPEQGPRASARPEQGPRASARPARFAYPPNLFVVDGGAPQVNAAAAVLDELGI 540 Query 524 TDVAVIGLAKRLEEVWVP----SEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRS 579 +DVAVIGLAKRLEEVWVP + PDP+I PRNS+GLYLLQRVRDEAHRFAI+YHRSKRS Sbjct 541 SDVAVIGLAKRLEEVWVPNLDGTAPDPVIFPRNSDGLYLLQRVRDEAHRFAISYHRSKRS 600 Query 580 TRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRP 639 RMTASALDSV GLGEHRRKALVTHFGS+ARLK+A+VDEITAVPGIG ATA AV +AL Sbjct 601 KRMTASALDSVRGLGEHRRKALVTHFGSLARLKQASVDEITAVPGIGAATARAVLEALGA 660 Query 640 DSSGA 644 DS A Sbjct 661 DSGAA 665 >gi|169629868|ref|YP_001703517.1| UvrABC system protein C UvrC [Mycobacterium abscessus ATCC 19977] gi|229558453|sp|B1MC92.1|UVRC_MYCA9 RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|169241835|emb|CAM62863.1| UvrABC system protein C UvrC [Mycobacterium abscessus] Length=671 Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/647 (80%), Positives = 572/647 (89%), Gaps = 3/647 (0%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDP+TYRPAPGSIPVEPGVYRFRD HGRVIYVGKAKSLRSRLTSYFAD+ L PRTRQ+ Sbjct 1 MPDPSTYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLTSYFADITGLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA VEWTVVGTEVEALQLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EE+PRL VY Sbjct 61 VTTAGSVEWTVVGTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEYPRLFVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCS GVFKRH+QIDRPCLLGYI+KCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSNGVFKRHKQIDRPCLLGYIEKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV A +HR+IV DFCDFLSGKTDR AR +E++MN AA++L+FERAARLRD++SAL Sbjct 181 APCIGRVSAQEHREIVLDFCDFLSGKTDRLARDMEREMNQAAQELNFERAARLRDNISAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 +RA+E+Q VV GDGTDADVVAF+DDELEAAVQVFHVRGGRVRGQRGWIVEK G+PGDS + Sbjct 241 QRALERQTVVFGDGTDADVVAFSDDELEAAVQVFHVRGGRVRGQRGWIVEKTGDPGDSDL 300 Query 301 Q-LVEQFLTQFYGDQAALDDAADESAN--PVPREVLVPCLPSNAEELASWLSGLRGSRVV 357 Q LVEQFLTQFYGDQA L AAD A+ PVPREVLVP LP +AE + SWL+GLRGSRV Sbjct 301 QGLVEQFLTQFYGDQADLVYAADTEADVAPVPREVLVPVLPRDAEGMTSWLTGLRGSRVS 360 Query 358 LRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIEC 417 LRVP+RGDK+ALAETV RNA++AL QHKLKRA D RSAALQ +QD+LGL APLRIEC Sbjct 361 LRVPQRGDKKALAETVERNAKEALAQHKLKRAGDLTTRSAALQELQDALGLEQAPLRIEC 420 Query 418 VDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHL 477 +D+SHVQGTDVV SLVVFEDGL R+SDYRH+ IREAAG GRSDDVA IAEVTRRRF RH+ Sbjct 421 IDISHVQGTDVVASLVVFEDGLSRRSDYRHYSIREAAGDGRSDDVASIAEVTRRRFARHV 480 Query 478 RDQSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEE 537 +DQ + E SR+FAYPPNL+VVDGGAPQVNAA+A + ELGVTDVAVIGLAKRLEE Sbjct 481 QDQQAVTEYAAEGHSRKFAYPPNLFVVDGGAPQVNAAAAELSELGVTDVAVIGLAKRLEE 540 Query 538 VWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHR 597 VWVP EPDP+I+PR SE LYLLQRVRDEAHRFAIT+HRSKRS RMTAS LD +PGLGE R Sbjct 541 VWVPGEPDPVILPRTSEALYLLQRVRDEAHRFAITFHRSKRSRRMTASVLDGIPGLGEAR 600 Query 598 RKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSSGA 644 R ALV+HFGS+A+LK+A+V+EITAVPGIG ATA AV +AL S A Sbjct 601 RAALVSHFGSVAQLKKASVEEITAVPGIGAATAVAVREALIETDSSA 647 >gi|111024123|ref|YP_707095.1| excinuclease ABC subunit C [Rhodococcus jostii RHA1] gi|119367828|sp|Q0S0J9.1|UVRC_RHOSR RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|110823653|gb|ABG98937.1| excinuclease ABC subunit C [Rhodococcus jostii RHA1] Length=727 Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/673 (77%), Positives = 561/673 (84%), Gaps = 36/673 (5%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDP+TYRPA G+IPV+PGVY+FRD HGRVIYVGKAKSLRSRL SYFADV++L PRTRQ+ Sbjct 1 MPDPSTYRPATGTIPVDPGVYKFRDPHGRVIYVGKAKSLRSRLNSYFADVSTLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA VEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDK+YPVLAVTL EE+PRL VY Sbjct 61 VTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEYPRLFVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLL RVFPARTCSAGVFKRH QI RPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSAGVFKRHNQIGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV AA+HR+IV DFCDFLSG+TDR R LE +M A+E+LDFE AARLRDD+ AL Sbjct 181 APCVGRVSAAEHRKIVEDFCDFLSGRTDRLVRQLEARMQEASEELDFETAARLRDDVGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPG------- 293 +RA+EKQAVVLGDGTDADV AFA DELEAAVQVFHVRGGRVRGQRGW+VEK G Sbjct 241 RRALEKQAVVLGDGTDADVAAFATDELEAAVQVFHVRGGRVRGQRGWVVEKAGDVIDWAS 300 Query 294 ---EPGDSGIQLVEQFLTQFYGDQAALDDAADESANP--VPREVLVPCLPSNAEELASWL 348 E G LVEQFLTQFYG+QAAL A D+ A VPREVLVP LP +AE++ WL Sbjct 301 VDSEAGSDLPLLVEQFLTQFYGEQAALSGATDQEAGTSGVPREVLVPVLPPDAEQVQEWL 360 Query 349 SGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGL 408 SGLRGS V LRVP+RGDK+ALAETV RNA +ALQQHKL+RA DF +RSAALQ IQ++L L Sbjct 361 SGLRGSAVRLRVPQRGDKKALAETVQRNATEALQQHKLRRAGDFTSRSAALQGIQEALDL 420 Query 409 ADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEV 468 APLRIECVD+SHVQGTDVV SLVVFEDGLPRKSDYRH+ I+EAAG GRSDDVA IAEV Sbjct 421 DSAPLRIECVDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIKEAAGDGRSDDVASIAEV 480 Query 469 TRRRFLRHLRD-----------------QSDPDLLSPER-------KSRRFAYPPNLYVV 504 TRRRFLRH RD D L+PE + RRFAYPPNL+VV Sbjct 481 TRRRFLRHNRDVGVLRAEAAGADADQVSGGDGGDLAPEAAIDPQTGRPRRFAYPPNLFVV 540 Query 505 DGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRD 564 DGGAPQV AASAV+DELG+TDVAVIGLAKRLEEVWVP E DP+I+PR SE LYLLQRVRD Sbjct 541 DGGAPQVAAASAVLDELGITDVAVIGLAKRLEEVWVPGEEDPVILPRTSESLYLLQRVRD 600 Query 565 EAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPG 624 EAHRFAIT+HRSKRS RMTASALDSV GLGE RRKALVTHFGS+ARLK+A+V+EITAVPG Sbjct 601 EAHRFAITFHRSKRSRRMTASALDSVRGLGETRRKALVTHFGSVARLKQASVEEITAVPG 660 Query 625 IGVATATAVHDAL 637 IG ATA AV AL Sbjct 661 IGTATAKAVLTAL 673 >gi|54025564|ref|YP_119806.1| excinuclease ABC subunit C [Nocardia farcinica IFM 10152] gi|81374328|sp|Q5YTP9.1|UVRC_NOCFA RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|54017072|dbj|BAD58442.1| putative excision nuclease ABC subunit C [Nocardia farcinica IFM 10152] Length=673 Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust. Identities = 499/668 (75%), Positives = 554/668 (83%), Gaps = 33/668 (4%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DPATYRPAPG+IPVEPGVY+FRD +GRVIYVGKAKSLRSRL SYFADVASL PRT+Q+VT Sbjct 3 DPATYRPAPGTIPVEPGVYKFRDSYGRVIYVGKAKSLRSRLNSYFADVASLHPRTKQMVT 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 TAA VEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EE+PRL VYRG Sbjct 63 TAASVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEYPRLFVYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 R+KGVRYFGPY+HAWAIRETLDLL RVFPARTCS GVFKRH QI RPCLLGYIDKCSAP Sbjct 123 ARKKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSTGVFKRHNQIGRPCLLGYIDKCSAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 C+GRV A +HR IV DFCDFL+G+TD+ R LE++M+AAAE LDFE AARLRDD+ AL+R Sbjct 183 CVGRVSAEEHRAIVEDFCDFLAGRTDKMVRELERRMHAAAEDLDFETAARLRDDVQALRR 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI-- 300 A+EKQAVVLG GTDADV+AFA DELE AVQ+FHVR GRVRGQRGW+V+K G+ DSG Sbjct 243 ALEKQAVVLGTGTDADVIAFATDELEVAVQIFHVRDGRVRGQRGWVVDKSGDAVDSGTGD 302 Query 301 ----QLVEQFLTQFYGDQAALDDAA--DESANPVPREVLVPCLPSNAEELASWLSGLRGS 354 LVEQFLTQFYG+Q A D ++ A VPREVLVP LP+ E+L WLS LRGS Sbjct 303 DETGALVEQFLTQFYGEQVAYADQTPDEQPATVVPREVLVPQLPAGHEQLQEWLSRLRGS 362 Query 355 RVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLR 414 V LRVP+RGDK+ALAETV RNA++AL QHKLKRA D +RSAALQ IQD+L L APLR Sbjct 363 AVRLRVPQRGDKKALAETVERNAKEALAQHKLKRAGDLTSRSAALQDIQDALDLDSAPLR 422 Query 415 IECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRF- 473 IECVD+SHVQGTDVV SLVVFEDGLPRKSDYRH+ I+EAAG+GRSDDV IAEVTRRRF Sbjct 423 IECVDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIKEAAGEGRSDDVGSIAEVTRRRFY 482 Query 474 -LRHLRDQSDPDLL--------------SPER---------KSRRFAYPPNLYVVDGGAP 509 LR RD+++ D L +P + R+FAYPPNLYVVDGGAP Sbjct 483 RLRKERDEAERDELDGTAAGAPLVDDDETPTSRPGIDPTTGRPRKFAYPPNLYVVDGGAP 542 Query 510 QVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRF 569 QV AA+ V+DELG+TDVAVIGLAKRLEEVWVP EPDP+I+PRNSE L+LLQRVRDEAHRF Sbjct 543 QVAAAAEVLDELGITDVAVIGLAKRLEEVWVPGEPDPVILPRNSEALFLLQRVRDEAHRF 602 Query 570 AITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVAT 629 AIT+HRSKRS RMTASALDSV GLG RR ALVTHFGS+A+LKEATV+EIT VPGIGVAT Sbjct 603 AITFHRSKRSRRMTASALDSVRGLGAARRTALVTHFGSVAKLKEATVEEITEVPGIGVAT 662 Query 630 ATAVHDAL 637 A AV AL Sbjct 663 AKAVLAAL 670 >gi|226366363|ref|YP_002784146.1| excinuclease ABC subunit C [Rhodococcus opacus B4] gi|254764941|sp|C1B4L2.1|UVRC_RHOOB RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|226244853|dbj|BAH55201.1| UvrABC system protein C [Rhodococcus opacus B4] Length=743 Score = 986 bits (2550), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/689 (75%), Positives = 564/689 (82%), Gaps = 52/689 (7%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDP+TYRPA G+IPV+PGVY+FRD HGRVIYVGKAKSLRSRL SYFADV++L PRTRQ+ Sbjct 1 MPDPSTYRPATGTIPVDPGVYKFRDPHGRVIYVGKAKSLRSRLNSYFADVSTLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA VEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDK+YPVLAVTL EE+PRL VY Sbjct 61 VTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEYPRLFVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLL RVFPARTCSAGVFKRH QI RPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSAGVFKRHNQIGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV AA+HR+IV DFCDFLSG+TD+ R LE +M A+E+LDFE AARLRDD+ AL Sbjct 181 APCVGRVSAAEHRKIVEDFCDFLSGRTDKLVRQLEARMQQASEELDFETAARLRDDVGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGE------ 294 +RA+EKQAVVLGDGTDADV AFA DELEAAVQVFHVRGGRVRGQRGW+VEK G+ Sbjct 241 RRALEKQAVVLGDGTDADVAAFATDELEAAVQVFHVRGGRVRGQRGWVVEKAGDVIDWAA 300 Query 295 ----PGDSGIQLVEQFLTQFYGDQAALDDAADESANP--VPREVLVPCLPSNAEELASWL 348 G LVEQFLTQFYG+QAAL AAD+ A VPREVLVP LP +AE++ WL Sbjct 301 VDSAAGSDLPLLVEQFLTQFYGEQAALSGAADQEAGSSGVPREVLVPVLPPDAEQVQEWL 360 Query 349 SGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGL 408 SGLRGS V LRVP+RGDK+ALAETV RNA +ALQQHKL+RA DF +RSAALQ IQ++L L Sbjct 361 SGLRGSAVRLRVPQRGDKKALAETVQRNAMEALQQHKLRRAGDFTSRSAALQGIQEALDL 420 Query 409 ADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEV 468 APLRIECVD+SHVQGTDVV SLVVFEDGLPRKSDYRH+ I+EAAG GRSDDVA IAEV Sbjct 421 DSAPLRIECVDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIKEAAGDGRSDDVASIAEV 480 Query 469 TRRRFLRHLRD---------------QSDPDL------------------LSPER----- 490 TRRRFLRH RD SD D L+PE Sbjct 481 TRRRFLRHNRDVGVLRAEAAGADGDQASDTDGDQVSDTDGDQVSGGDGGDLAPEAAIDPQ 540 Query 491 --KSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPII 548 + RRFAYPPNLYVVDGGAPQV AASAV+DELG+TDVAVIGLAKRLEEVWVP E DP+I Sbjct 541 TGRPRRFAYPPNLYVVDGGAPQVAAASAVLDELGITDVAVIGLAKRLEEVWVPGEEDPVI 600 Query 549 MPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSI 608 +PR SE LYLLQRVRDEAHRFAIT+HRSKRS RMTASALDSV GLGE RRKALVTHFGS+ Sbjct 601 LPRTSESLYLLQRVRDEAHRFAITFHRSKRSRRMTASALDSVRGLGETRRKALVTHFGSV 660 Query 609 ARLKEATVDEITAVPGIGVATATAVHDAL 637 A+LK+A+V+EITAVPGIG ATA AV AL Sbjct 661 AKLKQASVEEITAVPGIGTATAKAVLTAL 689 >gi|343924576|ref|ZP_08764124.1| UvrABC system protein C [Gordonia alkanivorans NBRC 16433] gi|343765511|dbj|GAA11050.1| UvrABC system protein C [Gordonia alkanivorans NBRC 16433] Length=683 Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/648 (75%), Positives = 547/648 (85%), Gaps = 15/648 (2%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP TYRPAPG+IP +PGVY+FRD+HGRVIYVGKAK+LRSRLTSYFAD+ASL PRTRQ+VT Sbjct 3 DPTTYRPAPGTIPTDPGVYKFRDEHGRVIYVGKAKNLRSRLTSYFADIASLHPRTRQMVT 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 TAA VEWTVVGTEVEALQLEY WIKEFDPRFNVRYRDDKSYP+LAVTL EE+PRL VYRG Sbjct 63 TAASVEWTVVGTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPMLAVTLNEEYPRLFVYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 PRR+GVRYFGPY+HAWAIRET+DLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP Sbjct 123 PRRRGVRYFGPYAHAWAIRETVDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 CIGRVDA +HR+IV DFCDFL+G+TD R LE+ M+AAAE LDFERAARLRDD+ AL+R Sbjct 183 CIGRVDAEEHREIVEDFCDFLAGRTDLLIRKLERDMSAAAEDLDFERAARLRDDIGALRR 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGIQL 302 AMEKQAVVLGDGT ADVVA A D+LE +VQVFHVR GRVRGQRGW+VE+ D + Sbjct 243 AMEKQAVVLGDGTTADVVAIAGDDLEVSVQVFHVRDGRVRGQRGWVVERSDNGTDGDV-- 300 Query 303 VEQFLTQFYGDQAALDDAADESAN-----PVPREVLVPCLPSNAEELASWLSGLRGSRVV 357 + +F+TQFYG Q D D A+ VPREVLVP LP++ EL WLSGLRGSRV Sbjct 301 IGEFITQFYGAQVDFDATVDVGADRAHGESVPREVLVPELPADTAELEEWLSGLRGSRVT 360 Query 358 LRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIEC 417 LRVP+RGDK+AL ETV RNA +AL QHKL+RA D RSAAL +Q++L L APLRIEC Sbjct 361 LRVPQRGDKKALFETVARNAGEALTQHKLRRAGDLTTRSAALTELQENLMLDQAPLRIEC 420 Query 418 VDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHL 477 VD+SHVQGTDVV SLVVFEDGLPRKSDYRH+ IR AAG G SDDVA IAEVTRRRFLRH Sbjct 421 VDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIRHAAGDGHSDDVASIAEVTRRRFLRHR 480 Query 478 RDQSDPDLLSPE--------RKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVI 529 D+ P S E + R+FAYPPNL+VVDGGAPQV+AA+AV+DELGVTDV+VI Sbjct 481 ADRDAPPPESGEVDAGPETSAQPRKFAYPPNLFVVDGGAPQVHAAAAVLDELGVTDVSVI 540 Query 530 GLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDS 589 GLAKRLEEVWVP E DP+I+PR+S+ L+LLQRVRDEAHRFAIT+HRSKRS RMTASALD Sbjct 541 GLAKRLEEVWVPGEDDPMILPRSSQALFLLQRVRDEAHRFAITFHRSKRSKRMTASALDG 600 Query 590 VPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDAL 637 +PGLG+ RR ALVTHFGS+ARL+EA+++EI VPGIG+ TA AV DAL Sbjct 601 IPGLGKTRRTALVTHFGSVARLREASLEEIAQVPGIGLTTARAVQDAL 648 >gi|229493469|ref|ZP_04387254.1| excinuclease ABC subunit C [Rhodococcus erythropolis SK121] gi|229319430|gb|EEN85266.1| excinuclease ABC subunit C [Rhodococcus erythropolis SK121] Length=730 Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust. Identities = 498/669 (75%), Positives = 555/669 (83%), Gaps = 28/669 (4%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDP+TYRPA G+IP PGVY+FRD HGRVIYVGKAKSLRSRL SYFADV +L PRTRQ+ Sbjct 1 MPDPSTYRPATGTIPAAPGVYKFRDPHGRVIYVGKAKSLRSRLNSYFADVTTLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA VEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDK+YPVLAVTL EEFPRL VY Sbjct 61 VTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEFPRLFVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLL RVFPARTCS+GVFKRH QI RPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSSGVFKRHNQIGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A +HRQIV DFCDFL+G+TD+ + LE++M A+E LDFE AARLRDD+ AL Sbjct 181 APCVGRVSAEEHRQIVEDFCDFLAGRTDKLVKDLEKRMQQASEDLDFETAARLRDDIGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 ++A+EKQAVVLGDGTDAD+VAFA D+LEAAVQVFHVRGGRVRGQRGW+VEK G+ D Sbjct 241 RKALEKQAVVLGDGTDADLVAFATDDLEAAVQVFHVRGGRVRGQRGWVVEKAGDAIDWAA 300 Query 301 Q--------LVEQFLTQFYGDQAALDDAADESA--NPVPREVLVPCLPSNAEELASWLSG 350 LVEQFLTQFYG+QAALD A A + VP+EVLVP LP+NA E+ +WLS Sbjct 301 LDAESDLPILVEQFLTQFYGEQAALDPGAGSEAGISAVPKEVLVPVLPANATEIQAWLSK 360 Query 351 LRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLAD 410 LRGS+V LRVP+RGDK+ LAETV RNA++AL QHKLKRA DF +RSAALQ IQ++L L Sbjct 361 LRGSQVQLRVPQRGDKKDLAETVQRNAKEALAQHKLKRAGDFTSRSAALQGIQEALDLDS 420 Query 411 APLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTR 470 APLRIEC+D+SHVQGTDVV SLVVFEDGLPRKSDYRH+ I+EAAG G SDDVA IAE+TR Sbjct 421 APLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIKEAAGDGHSDDVASIAEITR 480 Query 471 RRFLRHLRD-----------QSDPDLLSPER-------KSRRFAYPPNLYVVDGGAPQVN 512 RRFLRH RD SD L+PE + RRFAYPPNL+VVDGGAPQV Sbjct 481 RRFLRHNRDLGVLAASASTMDSDGGDLAPEAAIDPATGRPRRFAYPPNLFVVDGGAPQVT 540 Query 513 AASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAIT 572 AA+AV+DELGVTDVAV+GLAKRLEEVWVP E DP+I+PR SE LYLLQR+RDEAHRFAIT Sbjct 541 AAAAVLDELGVTDVAVVGLAKRLEEVWVPGEEDPVILPRTSESLYLLQRIRDEAHRFAIT 600 Query 573 YHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATA 632 +HRSKRS RMTASALDSV GLGE RR ALV HFGS+A+LK ATV+EI VPGIG TATA Sbjct 601 FHRSKRSRRMTASALDSVKGLGETRRTALVAHFGSVAKLKTATVEEIMQVPGIGETTATA 660 Query 633 VHDALRPDS 641 V AL DS Sbjct 661 VLAALGTDS 669 >gi|226306512|ref|YP_002766472.1| UvrABC system protein C [Rhodococcus erythropolis PR4] gi|259710345|sp|C0ZZE8.1|UVRC_RHOE4 RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|226185629|dbj|BAH33733.1| UvrABC system protein C [Rhodococcus erythropolis PR4] Length=730 Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust. Identities = 496/669 (75%), Positives = 555/669 (83%), Gaps = 28/669 (4%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDP+TYRPA G+IP PGVY+FRD HGRVIYVGKAKSLRSRL SYFADV +L PRTRQ+ Sbjct 1 MPDPSTYRPATGTIPAAPGVYKFRDPHGRVIYVGKAKSLRSRLNSYFADVTTLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA VEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDK+YPVLAVTL EEFPRL VY Sbjct 61 VTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEFPRLFVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLL RVFPARTCS+GVFKRH QI RPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSSGVFKRHNQIGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A +HRQIV DFCDFL+G+TD+ + LE++M A+E LDFE AARLRDD+ AL Sbjct 181 APCVGRVSAEEHRQIVEDFCDFLAGRTDKLVKDLEKRMQQASEDLDFETAARLRDDIGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 ++A+EKQAVVLGDGTDAD+VAFA D+LEAAVQVFHVRGGRVRGQRGW+VEK G+ D Sbjct 241 RKALEKQAVVLGDGTDADLVAFATDDLEAAVQVFHVRGGRVRGQRGWVVEKAGDAIDWAA 300 Query 301 Q--------LVEQFLTQFYGDQAALDDAADESA--NPVPREVLVPCLPSNAEELASWLSG 350 LVEQFLTQFYG+QAALD A A + VP+EVLVP LP+NA E+ +WLS Sbjct 301 LDAESDLPILVEQFLTQFYGEQAALDPGAGSEAGISAVPKEVLVPVLPANATEIQAWLSK 360 Query 351 LRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLAD 410 LRGS+V LRVP+RGDK+ LAETV RNA++AL QHKLKRA DF +RSAALQ IQ++L L Sbjct 361 LRGSQVQLRVPQRGDKKDLAETVQRNAKEALAQHKLKRAGDFTSRSAALQGIQEALDLDS 420 Query 411 APLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTR 470 APLRIEC+D+SHVQGTDVV SLVVFEDGLPRKSDYRH+ I+EAAG G SDDVA IAE+TR Sbjct 421 APLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIKEAAGDGHSDDVASIAEITR 480 Query 471 RRFLRHLRD-----------QSDPDLLSPER-------KSRRFAYPPNLYVVDGGAPQVN 512 RRF+RH RD +D L+PE + RRFAYPPNL+VVDGGAPQV Sbjct 481 RRFIRHNRDLGILAASASTMDADGGDLAPEAAIDPATGRPRRFAYPPNLFVVDGGAPQVT 540 Query 513 AASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAIT 572 AA+AV+DELGVTDVAV+GLAKRLEEVWVP E DP+I+PR SE LYLLQR+RDEAHRFAIT Sbjct 541 AAAAVLDELGVTDVAVVGLAKRLEEVWVPGEEDPVILPRTSESLYLLQRIRDEAHRFAIT 600 Query 573 YHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATA 632 +HRSKRS RMTASALDSV GLGE RR ALV HFGS+A+LK ATV+EI VPGIG TATA Sbjct 601 FHRSKRSRRMTASALDSVKGLGETRRTALVAHFGSVAKLKTATVEEIMQVPGIGETTATA 660 Query 633 VHDALRPDS 641 V AL DS Sbjct 661 VLAALGTDS 669 >gi|262202286|ref|YP_003273494.1| excinuclease ABC subunit C [Gordonia bronchialis DSM 43247] gi|262085633|gb|ACY21601.1| excinuclease ABC, C subunit [Gordonia bronchialis DSM 43247] Length=671 Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/659 (74%), Positives = 550/659 (84%), Gaps = 25/659 (3%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP TYRPAPG+IP EPGVYRFRD HGRVIYVGKAKSLRSRLTSYFAD+ASL PRTRQ+VT Sbjct 3 DPTTYRPAPGTIPTEPGVYRFRDAHGRVIYVGKAKSLRSRLTSYFADIASLHPRTRQMVT 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 TAA VEWTVVGTEVEALQLEY WIKEFDPRFNVRYRDDKSYP+LAVTL EE+PRL VYRG Sbjct 63 TAASVEWTVVGTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPMLAVTLNEEYPRLFVYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 PRR+GVRYFGPYSHAWAIRET+DLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKC+AP Sbjct 123 PRRRGVRYFGPYSHAWAIRETVDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCAAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 C+GRV A QHR+IV DFCDFL+G+TD+ R +E++M+AAA +LDFERAARLRDD+ A++R Sbjct 183 CVGRVSAEQHREIVDDFCDFLAGRTDQMIRRMEREMSAAATELDFERAARLRDDIGAMRR 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKP--GEPGDSGI 300 AMEKQAVVLGDGTDADVVAFA D+LE +VQ+FHVR GRVRGQRGW+VE+ G GD Sbjct 243 AMEKQAVVLGDGTDADVVAFAGDDLEVSVQIFHVRDGRVRGQRGWVVERSDNGSVGD--- 299 Query 301 QLVEQFLTQFYGDQAALDDAADESA-----NPVPREVLVPCLPSNAEELASWLSGLRGSR 355 LV FLTQFYG Q LD + A + VPREV+VP LPS+A EL WLS LRGSR Sbjct 300 -LVGDFLTQFYGQQVDLDATVEIGAGRARGDAVPREVMVPELPSDAAELEDWLSELRGSR 358 Query 356 VVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRI 415 V LRVP+RGDK+AL +TV RNA +AL QHKL+RA D RSAAL +Q+SLGL APLRI Sbjct 359 VRLRVPQRGDKKALFDTVGRNASEALAQHKLRRAGDLTTRSAALTELQESLGLDQAPLRI 418 Query 416 ECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLR 475 ECVD+SHVQGTDVV SLVVFEDGLPRKSDYRH+ IR AAG G SDDVA IAEVTRRRFLR Sbjct 419 ECVDISHVQGTDVVASLVVFEDGLPRKSDYRHYSIRHAAGDGHSDDVASIAEVTRRRFLR 478 Query 476 HLRDQ--SDPDLLS-------PERK-----SRRFAYPPNLYVVDGGAPQVNAASAVIDEL 521 H DQ + P + S PE ++FAYPPNL+VVDGGAPQV+AA+AV+DEL Sbjct 479 HRADQLPAPPPMESGPAPTGTPEADVAPPVPKKFAYPPNLFVVDGGAPQVHAAAAVLDEL 538 Query 522 GVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTR 581 G+TDV+VIGLAKRLEEVW P + +PII+PR E L+LLQRVRDEAHRFAIT+HR+KRS R Sbjct 539 GITDVSVIGLAKRLEEVWTPGDDEPIILPRAGEALFLLQRVRDEAHRFAITFHRNKRSKR 598 Query 582 MTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPD 640 MT S LD VPGLG R+ ALVTHFGS+ARL+EA++++I+ VPGIG+ATA AV AL D Sbjct 599 MTESVLDGVPGLGRTRKTALVTHFGSVARLREASLEDISGVPGIGMATARAVQAALGED 657 >gi|312139598|ref|YP_004006934.1| excinuclease ABC subunit c uvrc [Rhodococcus equi 103S] gi|325676727|ref|ZP_08156401.1| excinuclease ABC subunit C [Rhodococcus equi ATCC 33707] gi|311888937|emb|CBH48250.1| excinuclease ABC subunit C UvrC [Rhodococcus equi 103S] gi|325552509|gb|EGD22197.1| excinuclease ABC subunit C [Rhodococcus equi ATCC 33707] Length=694 Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/647 (78%), Positives = 546/647 (85%), Gaps = 27/647 (4%) Query 18 PGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTEVE 77 PGVY+FRD HGRVIYVGKAKSLRSRL SYFADV+SL PRTRQ+VTTA VEWTVV TEVE Sbjct 3 PGVYKFRDPHGRVIYVGKAKSLRSRLNSYFADVSSLHPRTRQMVTTAGSVEWTVVSTEVE 62 Query 78 ALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYSHA 137 ALQLEY WIKEFDPRFNVRYRDDK+YPVLAVTL EE+PRL VYRGPRRKGVRYFGPYSHA Sbjct 63 ALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEYPRLFVYRGPRRKGVRYFGPYSHA 122 Query 138 WAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVDAAQHRQIVA 197 WAIRETLDLL RVFPARTCSAGVFKRH QI RPCLLGYIDKCSAPC+GRV AA+HR+IV Sbjct 123 WAIRETLDLLLRVFPARTCSAGVFKRHNQIGRPCLLGYIDKCSAPCVGRVSAAEHREIVE 182 Query 198 DFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGTDA 257 DFCDFLSG+TDR R LE +M AAE LDFE AARLRDD+ ALK+A+EKQAVVLGDGTDA Sbjct 183 DFCDFLSGRTDRLVRQLETRMQEAAEDLDFETAARLRDDVGALKKALEKQAVVLGDGTDA 242 Query 258 DVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGE-------PGDSGIQ-----LVEQ 305 D+VAFA DELE AVQVFHVRGGRVRGQRGW+VEK G+ D+G + LVEQ Sbjct 243 DLVAFASDELEVAVQVFHVRGGRVRGQRGWVVEKAGDVIERDAVAADAGAESELALLVEQ 302 Query 306 FLTQFYGDQAALDD---AADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPR 362 FLTQFYG+QAAL D AAD+ N VPREVLVP LP + E L WL GLRGS V LRVP+ Sbjct 303 FLTQFYGEQAALSDSGAAADQPTNAVPREVLVPALPRDVEGLQQWLGGLRGSSVKLRVPQ 362 Query 363 RGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSH 422 RGDK+ALAETV RNA++AL QHKL+RA DF +RSAALQ IQ++L L APLRIECVD+SH Sbjct 363 RGDKKALAETVERNAKEALAQHKLRRAGDFTSRSAALQGIQEALDLDSAPLRIECVDISH 422 Query 423 VQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLR---- 478 VQGTDVV SLVVFEDGLPRKSDYRH+ IREAAG GRSDDVA IAEVTRRRFLRH R Sbjct 423 VQGTDVVASLVVFEDGLPRKSDYRHYAIREAAGDGRSDDVASIAEVTRRRFLRHNRDVAA 482 Query 479 -------DQSDPDLLSPER-KSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIG 530 DQ+ L P+ + RRFAYPPNL+VVDGG+PQVNAA+ V+DELGVTDVAVIG Sbjct 483 GGGADGGDQAPEAALDPQTGRPRRFAYPPNLFVVDGGSPQVNAAAEVLDELGVTDVAVIG 542 Query 531 LAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSV 590 LAKRLEEVWVP E DP+I+PR SE LYLLQR+RDEAHRFAIT+HRSKRS RMTASALDSV Sbjct 543 LAKRLEEVWVPGEEDPVILPRTSESLYLLQRIRDEAHRFAITFHRSKRSRRMTASALDSV 602 Query 591 PGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDAL 637 GLGE RR ALVTHFGS+A+L+EATV+EITAVPGIGVATA AV AL Sbjct 603 RGLGETRRTALVTHFGSVAKLREATVEEITAVPGIGVATAQAVLAAL 649 >gi|333919552|ref|YP_004493133.1| UvrABC system protein C [Amycolicicoccus subflavus DQS3-9A1] gi|333481773|gb|AEF40333.1| UvrABC system protein C [Amycolicicoccus subflavus DQS3-9A1] Length=664 Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/655 (74%), Positives = 552/655 (85%), Gaps = 15/655 (2%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDP+TYRPAPGSIP+EPGVYRFRD GRV+YVGKAKSLRSRL SYFAD+ L PRTR++ Sbjct 1 MPDPSTYRPAPGSIPLEPGVYRFRDASGRVLYVGKAKSLRSRLNSYFADLTGLQPRTRKM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA+ VEWTVVGTEVEALQLEY WIKEFDP FNVRYRDDKSYPVLAVTL EE+PRL VY Sbjct 61 VTTASGVEWTVVGTEVEALQLEYNWIKEFDPPFNVRYRDDKSYPVLAVTLNEEYPRLFVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPR+KGVRYFGPYSHAWAIRETLDLL RVFPARTCSAGV KRH+Q+ RPCLLGYI KCS Sbjct 121 RGPRKKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSAGVLKRHQQLGRPCLLGYIGKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC G+V AA+HR+IV DFCDFLSGKTDR R LE+ MN A+E LDFERAARLRDD+ AL Sbjct 181 APCTGQVGAAEHRRIVEDFCDFLSGKTDRMVRELERHMNEASEALDFERAARLRDDIGAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 +RA+EKQAVVLGDGTDADVVAFA D+LE ++QVFHVRGGRVRGQRGW++E+ GE DS Sbjct 241 RRALEKQAVVLGDGTDADVVAFAADDLEVSLQVFHVRGGRVRGQRGWVIERVGEQDDS-- 298 Query 301 QLVEQFLTQFYGDQAA----LDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRV 356 ++VE+FLTQFYG+Q A L + A +SA+P+P+ VLVP LP N + L WLS LRGS V Sbjct 299 EMVEEFLTQFYGEQQALAHDLPEGARKSASPIPKTVLVPMLPPNTDGLERWLSELRGSAV 358 Query 357 VLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIE 416 +RVPRRGDK+ALAETV RNA ++L QHKL+RA D ARSAALQ +QD+LGL APLRIE Sbjct 359 RVRVPRRGDKKALAETVQRNAHESLAQHKLRRAGDLTARSAALQELQDTLGLDTAPLRIE 418 Query 417 CVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRH 476 C+D+SHVQGTDVVGSLVVFEDGL RKSDYRH+ I+EAAG+GRS+DVA IAEVT RRF R+ Sbjct 419 CIDISHVQGTDVVGSLVVFEDGLARKSDYRHYTIKEAAGEGRSNDVASIAEVTHRRFARY 478 Query 477 LR--------DQSDPDLLSPER-KSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVA 527 R D + L PE + RRFAYPPNL+VVDGG PQVNAASA ++ELG+TD+A Sbjct 479 RRADETGAPADVAAFQALDPETGRPRRFAYPPNLFVVDGGLPQVNAASAALEELGITDIA 538 Query 528 VIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASAL 587 VIGLAKRLEEVW+P E P+I PR SE L+LLQR+RDEAHRFAIT+HRSKRS RMT S L Sbjct 539 VIGLAKRLEEVWLPGEEYPVIFPRTSEALFLLQRIRDEAHRFAITFHRSKRSRRMTESVL 598 Query 588 DSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPDSS 642 D++PGLG+ R+ ALVTHFGS+ARLK A++ EIT VPGIG TA AVH+AL DSS Sbjct 599 DTIPGLGQTRKTALVTHFGSVARLKAASLGEITQVPGIGDMTARAVHEALNRDSS 653 >gi|326382177|ref|ZP_08203869.1| excinuclease ABC subunit C [Gordonia neofelifaecis NRRL B-59395] gi|326198907|gb|EGD56089.1| excinuclease ABC subunit C [Gordonia neofelifaecis NRRL B-59395] Length=681 Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/659 (70%), Positives = 536/659 (82%), Gaps = 31/659 (4%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP+TYRPAPG+IP +PGVY+FRDQHGRVIYVGKAKSLR RLTSYFAD+ L PRTRQ+VT Sbjct 3 DPSTYRPAPGTIPTDPGVYKFRDQHGRVIYVGKAKSLRQRLTSYFADITGLHPRTRQMVT 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 TAA VEWTVVGTEVEALQLEY WIKEFDPRFNVRYRDDKSYP+LAVT+ EE+PR+ VYRG Sbjct 63 TAASVEWTVVGTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPMLAVTMNEEYPRVFVYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 RR GVRYFGPY+HAWAIRET+DLLTRVF RTCS GVF+R Q+ RPCLLGYIDKCSAP Sbjct 123 ARRPGVRYFGPYAHAWAIRETVDLLTRVFGVRTCSKGVFRRSEQMGRPCLLGYIDKCSAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 C+GRV AA+HR IV DFCDFL+G+TD R LE++M+ AAE+LDFERAARLRDD+SAL+R Sbjct 183 CVGRVSAAEHRAIVEDFCDFLAGRTDGLIRKLEREMSDAAEELDFERAARLRDDVSALRR 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGIQL 302 AMEKQAVVLG GTDADV+A DELE +V+VFHVR GRVRG+RGW+VE + S Sbjct 243 AMEKQAVVLGSGTDADVIAMVGDELECSVKVFHVRDGRVRGERGWVVEV--QENASLSDQ 300 Query 303 VEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPR 362 V FLTQFYGD+ + ++ +PREVLVP LP +A ++ WL+G RG+ V LRVP+ Sbjct 301 VGTFLTQFYGDETDM-------SSGIPREVLVPALPDDAPDVEKWLAGRRGAHVSLRVPQ 353 Query 363 RGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSH 422 RGDKR L TV RNA +AL +HKL+RA D RSAAL +QD+LGL APLRIEC+D+SH Sbjct 354 RGDKRTLMTTVERNATEALARHKLQRAGDLTTRSAALTELQDALGLDVAPLRIECIDISH 413 Query 423 VQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRD--- 479 VQGTDVV SLVVFEDGL RKSDYRH+ I+EAAG GRSDDVA IAEVTRRRFLRH RD Sbjct 414 VQGTDVVASLVVFEDGLARKSDYRHYSIKEAAGDGRSDDVASIAEVTRRRFLRH-RDGAA 472 Query 480 ------------------QSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDEL 521 ++ PD + RK+++FAYPPNL+VVDGGAPQ +AA++V+DEL Sbjct 473 APPPEDTVQTGSADSGSGETAPDDDATSRKAKKFAYPPNLFVVDGGAPQAHAAASVLDEL 532 Query 522 GVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTR 581 GVTDVAV+GLAKRLEEVW+P + +P+I+PRNSE L+LLQRVRDEAHRFAIT+HRSKRS R Sbjct 533 GVTDVAVVGLAKRLEEVWIPGDDEPVILPRNSEALFLLQRVRDEAHRFAITFHRSKRSKR 592 Query 582 MTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDALRPD 640 MTASALD + GLG RR ALVTHFGS+A+LK+ATV+EI V GIG ATA AVH+AL PD Sbjct 593 MTASALDGIAGLGAGRRTALVTHFGSVAKLKQATVEEIGEVKGIGPATAQAVHEALNPD 651 >gi|296140249|ref|YP_003647492.1| excinuclease ABC subunit C [Tsukamurella paurometabola DSM 20162] gi|296028383|gb|ADG79153.1| excinuclease ABC, C subunit [Tsukamurella paurometabola DSM 20162] Length=675 Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust. Identities = 479/670 (72%), Positives = 551/670 (83%), Gaps = 32/670 (4%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 + DP +YRPAPG+IP +PGVY+FRD+HGRVIYVGKAKSLRSRL SYFADV L PRT Q+ Sbjct 1 MADPQSYRPAPGTIPTQPGVYKFRDKHGRVIYVGKAKSLRSRLNSYFADVYGLHPRTYQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAA VEWTVV TEVEALQLEY WIKEFDP+FNVRYRDDK+YP+LAVTL EE+PRL VY Sbjct 61 VTTAASVEWTVVNTEVEALQLEYNWIKEFDPQFNVRYRDDKTYPMLAVTLNEEYPRLYVY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGPRRKGVRYFGPYSHAWAIRETLDLL RVFPARTCSAGVFKRH Q+ RPCLLGYIDKCS Sbjct 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSAGVFKRHNQMGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV AA+HRQIV DFCDFL+GKTD + LE M AA+E+LDFERAARLRDD+SAL Sbjct 181 APCIGRVTAAEHRQIVDDFCDFLAGKTDNLIKQLENDMLAASEELDFERAARLRDDVSAL 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEP-GDSG 299 ++A+EKQAVVLGDGTDADV+AF+ DELEAAVQ+FHVRGGRVRGQRGW+VEKPG+ + Sbjct 241 RKAVEKQAVVLGDGTDADVIAFSADELEAAVQIFHVRGGRVRGQRGWVVEKPGDAEQNEH 300 Query 300 IQLVEQFLTQFYGDQAA-LDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVL 358 +LVEQFLTQFYG++A + D +ANPVPREVLVP LP +A+EL WLS LRGSRV L Sbjct 301 AELVEQFLTQFYGEEAERAKQSGDTAANPVPREVLVPVLPDDADELQDWLSELRGSRVSL 360 Query 359 RVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECV 418 R+P+RGDKR L ETV RNA +AL QHKLKR+ D ARSAALQ +Q +L L +APLRIECV Sbjct 361 RIPQRGDKRTLMETVERNAAEALHQHKLKRSGDLTARSAALQGLQGALDLDEAPLRIECV 420 Query 419 DVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLR 478 D+SH+QG+DVV SLVVFEDGL +KSDYRH+ I+EAAG G SDDVA IAEVTRRRFLRH Sbjct 421 DISHIQGSDVVASLVVFEDGLAKKSDYRHYAIKEAAGDGHSDDVASIAEVTRRRFLRHRA 480 Query 479 D---------------QSDPDL--------LSPER-------KSRRFAYPPNLYVVDGGA 508 D + DL L+PE + RRFAYPPNLYVVDGG Sbjct 481 DAHQEAGDSGAGVAASDNGGDLAASDNGGDLAPEAAIDPQTGRPRRFAYPPNLYVVDGGP 540 Query 509 PQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHR 568 PQ AA AV+D+LGVTDVAV+GLAKRLEEVWVP E DP+I+PR+S+ L+LLQRVRDEAHR Sbjct 541 PQAAAAQAVLDDLGVTDVAVVGLAKRLEEVWVPGEDDPVILPRSSDALFLLQRVRDEAHR 600 Query 569 FAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVA 628 FAI +HR+KRS RMT+SALDS+PGLG+ R+ AL+ HFGS+A+L+ A+++EI VPGIG+ Sbjct 601 FAIGFHRTKRSKRMTSSALDSIPGLGDTRKAALIRHFGSVAKLRAASLEEIVEVPGIGLT 660 Query 629 TATAVHDALR 638 TA V DALR Sbjct 661 TARTVLDALR 670 >gi|257055608|ref|YP_003133440.1| Excinuclease ABC subunit C [Saccharomonospora viridis DSM 43017] gi|256585480|gb|ACU96613.1| Excinuclease ABC subunit C [Saccharomonospora viridis DSM 43017] Length=658 Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/660 (70%), Positives = 524/660 (80%), Gaps = 21/660 (3%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP+TYRPAPG+IP PGVY+FRD GRVIYVGKAKSLRSRL SYF D+A L PRTRQ+VT Sbjct 3 DPSTYRPAPGTIPDSPGVYKFRDAGGRVIYVGKAKSLRSRLNSYFTDLAGLHPRTRQMVT 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 TAA VEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDK+YPVLAVTL EEFPRL VYRG Sbjct 63 TAASVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEFPRLHVYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 PR+KGVRYFGPY+HAWAIRETLDLL RVFPARTCS GVF+RH QI RPCLLGYIDKCSAP Sbjct 123 PRKKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSTGVFRRHSQIGRPCLLGYIDKCSAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 C+G V A +HR+IV FCDFLSG+TD+ R LE++M A+E L+FERAARLRDDL+AL++ Sbjct 183 CVGAVSAERHREIVEGFCDFLSGRTDQMVRKLEREMAEASEALEFERAARLRDDLAALRK 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGIQL 302 AMEKQAVVLGDGTDADV+AFA DELEAAVQ+FHVRGGRVRGQRGW+++K E S L Sbjct 243 AMEKQAVVLGDGTDADVIAFAHDELEAAVQIFHVRGGRVRGQRGWVIDKVEEMDVS--DL 300 Query 303 VEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPR 362 VEQFL+QFY QA L VPREVLVP LP+NAE + WLS LRGSRV LRVP+ Sbjct 301 VEQFLSQFYAGQAELAAETPTDGVVVPREVLVPELPANAESMEQWLSELRGSRVRLRVPQ 360 Query 363 RGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSH 422 RGDKR LAETV RNAE+A QHKL+RA D ARSAAL +Q+ LGL APLRIECVDVSH Sbjct 361 RGDKRTLAETVARNAEEAFSQHKLRRAGDLTARSAALSELQEYLGLDSAPLRIECVDVSH 420 Query 423 VQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSD 482 + GTDVV SLVVFEDGLPRKS+YR F +REAA +G DVA IAEV RRRF R+L++ Sbjct 421 LAGTDVVASLVVFEDGLPRKSEYRRFALREAATEG---DVAAIAEVVRRRFSRYLKETQA 477 Query 483 PDL------------LSPER-KSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVI 529 + L PE K R+FAYPPNL VVDG PQ AA+ V+ ELG+TDVAV+ Sbjct 478 QGVERGTETPGVNQALDPETGKPRKFAYPPNLLVVDGAGPQATAAADVLAELGITDVAVV 537 Query 530 GLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDS 589 GLAKRLEEVW+P++ +P+I+PR S+ LYLLQRVRDEAHRFAI Y R KRS R+ S LD Sbjct 538 GLAKRLEEVWLPADDNPVILPRTSDALYLLQRVRDEAHRFAIRYQRQKRSKRVQESVLDG 597 Query 590 VPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDAL---RPDSSGAAR 646 +PGLG+ R+ AL+ HFGS+ +++EATV EI AVPG G TA VH AL R DS G ++ Sbjct 598 IPGLGQVRKAALIKHFGSVKKIREATVAEIAAVPGFGTRTAEVVHAALAGGRTDSRGESQ 657 >gi|302525893|ref|ZP_07278235.1| excinuclease ABC, C subunit [Streptomyces sp. AA4] gi|302434788|gb|EFL06604.1| excinuclease ABC, C subunit [Streptomyces sp. AA4] Length=679 Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/673 (69%), Positives = 533/673 (80%), Gaps = 37/673 (5%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 V DP TYRP PGSIP PGVY+FRD RVIYVGKAKSLRSRL SYFAD++ L PRTRQ+ Sbjct 4 VADPTTYRPQPGSIPDSPGVYKFRDDAKRVIYVGKAKSLRSRLNSYFADLSGLHPRTRQM 63 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTAA VEWTVVGTEVEALQLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EEFPRL VY Sbjct 64 VTTAASVEWTVVGTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEFPRLHVY 123 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RG R+KGVRYFGPYSHAWAIRETLDLL RVFPARTCSAGVF+RH QI RPCLLGYIDKCS Sbjct 124 RGARKKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSAGVFRRHGQIGRPCLLGYIDKCS 183 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A +HR IV DFCDFL+G+TD + LE++M AA+E+L+FERAARLRDDL AL Sbjct 184 APCVGRVSADEHRAIVEDFCDFLAGRTDAMMKRLEREMAAASEELEFERAARLRDDLGAL 243 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 +RAMEKQAVV GDGTDADVVAFA DELEAAVQVFHVRGGRVRGQRGW+++K E + Sbjct 244 RRAMEKQAVVFGDGTDADVVAFAHDELEAAVQVFHVRGGRVRGQRGWVIDKAEE---MDV 300 Query 301 Q-LVEQFLTQFYG---DQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRV 356 Q LV+ FLTQFYG D+A DD E+ VPREVLVP LP++AE + WLSGLRGSRV Sbjct 301 QALVDHFLTQFYGEESDRAGRDDL--ETGPVVPREVLVPELPADAEAVEEWLSGLRGSRV 358 Query 357 VLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIE 416 LRV +RGDK+ALAETV RNA++A QHKL+RA D ARSAALQ +QD L L APLRIE Sbjct 359 RLRVAQRGDKKALAETVERNAKEAFTQHKLRRAGDLTARSAALQELQDYLALDTAPLRIE 418 Query 417 CVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRH 476 C+D+SH+QG+DVV SLVVFEDGLPRKS+YR F +REAA +G DVA IAEV RRRF R+ Sbjct 419 CIDISHIQGSDVVASLVVFEDGLPRKSEYRKFALREAATEG---DVASIAEVVRRRFYRY 475 Query 477 LRDQSDP-----------------DLLSPER--------KSRRFAYPPNLYVVDGGAPQV 511 L++ ++ + + P R + R+FAYPPNL VVDG PQ Sbjct 476 LKETAENAAETTETADETGEEAGDEAIQPVRAGIDPETGRPRKFAYPPNLLVVDGAGPQA 535 Query 512 NAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAI 571 AA+ V+ ELG+TD+AV+GLAKRLEEVW+P EPDP+I+PR S+ L+LLQR+RDEAHRFAI Sbjct 536 TAAADVLAELGITDIAVVGLAKRLEEVWLPGEPDPMILPRTSDALFLLQRLRDEAHRFAI 595 Query 572 TYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATAT 631 YHR KR+ RM AS LDSVPGLG+ RR AL+ HFGS+ +LK+A V+EI AVPG G TA Sbjct 596 RYHREKRAKRMQASELDSVPGLGQARRTALIKHFGSVKKLKQARVEEIEAVPGFGRRTAE 655 Query 632 AVHDALRPDSSGA 644 AV AL ++ A Sbjct 656 AVVAALAGETGSA 668 >gi|256379213|ref|YP_003102873.1| excinuclease ABC subunit C [Actinosynnema mirum DSM 43827] gi|255923516|gb|ACU39027.1| excinuclease ABC, C subunit [Actinosynnema mirum DSM 43827] Length=649 Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/637 (70%), Positives = 514/637 (81%), Gaps = 11/637 (1%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP+TYRPA GSIP PGVY+FRD GRV+YVGKAK+LRSRL SYFAD++ L PRTRQ+VT Sbjct 3 DPSTYRPAAGSIPEAPGVYKFRDPTGRVVYVGKAKNLRSRLNSYFADLSGLHPRTRQMVT 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 TAA VEWTVVGTEVEALQLEY WIKEFDPRFNVRY+DDKSYP+LAVTL EE PRL VYRG Sbjct 63 TAASVEWTVVGTEVEALQLEYNWIKEFDPRFNVRYKDDKSYPMLAVTLNEEIPRLHVYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 P+R+GVRYFGPY HAWA+RETLD+L RVFPARTC+ GVFKRH Q+ RPCLLGYIDKCSAP Sbjct 123 PQRRGVRYFGPYPHAWALRETLDMLLRVFPARTCTGGVFKRHEQMGRPCLLGYIDKCSAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 C+GRV +HR IV +FCDF +G+TD R LE++MNAAAE+L+FERAARLRDDLSAL+R Sbjct 183 CVGRVSPDEHRAIVGEFCDFFAGRTDGMVRRLEREMNAAAEELEFERAARLRDDLSALRR 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGIQL 302 A+EKQAVVLGDGTDADVVAFA D+LE +VQVFHVRGGRVRGQR W+V++ G L Sbjct 243 AVEKQAVVLGDGTDADVVAFATDDLEVSVQVFHVRGGRVRGQRAWVVDRENSEGVPA--L 300 Query 303 VEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPR 362 V++FLTQFYG QA AA E A PVPREVLVP LP +A L WL GLRG++V LRVP+ Sbjct 301 VDRFLTQFYGGQAEAAGAAAEDAAPVPREVLVPELPDDAPALERWLGGLRGTKVGLRVPQ 360 Query 363 RGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSH 422 RGDKR L TV RNA++ LQQHKL+RA D ARSAALQ +QD+L L APLRIECVD+SH Sbjct 361 RGDKRDLMATVERNAKEELQQHKLRRAGDLTARSAALQELQDALDLPSAPLRIECVDISH 420 Query 423 VQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLR---- 478 QGTDVV SLVVFEDGLPRKS+YR F +REAA +G DVA IAEV RRRF +L+ Sbjct 421 TQGTDVVASLVVFEDGLPRKSEYRRFALREAATEG---DVASIAEVVRRRFQAYLKETAE 477 Query 479 --DQSDPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLE 536 D + P + K RRFAY PNL VVDG PQ AA+ V+ ELG+ +VAV+GLAKRLE Sbjct 478 AGDDAKPGIDPETGKPRRFAYAPNLLVVDGAGPQATAAAGVLAELGIENVAVVGLAKRLE 537 Query 537 EVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEH 596 EVW+P +PDP I+PR S LYLLQ +RDEAHRFAI YHR KRS RMTAS LD VPGLG+ Sbjct 538 EVWLPDDPDPTILPRTSTALYLLQHLRDEAHRFAIAYHRQKRSKRMTASELDDVPGLGQT 597 Query 597 RRKALVTHFGSIARLKEATVDEITAVPGIGVATATAV 633 R+ AL+ HFGS+ +L+EA+++EI+ VPG+G TA AV Sbjct 598 RKAALLKHFGSLRKLREASIEEISGVPGVGRRTAEAV 634 >gi|324999180|ref|ZP_08120292.1| Excinuclease ABC subunit C [Pseudonocardia sp. P1] Length=665 Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/653 (71%), Positives = 529/653 (82%), Gaps = 23/653 (3%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP+TYRPA G+IP PGVYRF D GRVIYVGKAKSLR RL SYFAD++ L PRTRQ+VT Sbjct 3 DPSTYRPATGTIPESPGVYRFSDPRGRVIYVGKAKSLRQRLNSYFADLSGLHPRTRQMVT 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 TA+KVEWTVVGTEVEALQLEY WIKE+DPRFNVRYRDDK+YPVLAVT+ EE+PRL VYRG Sbjct 63 TASKVEWTVVGTEVEALQLEYNWIKEYDPRFNVRYRDDKTYPVLAVTMNEEYPRLHVYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 PRRKGVRYFGPY+HAWAIRETLDLL RVFPARTCSAGVFKRH QI RPCLLGYIDKCSAP Sbjct 123 PRRKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSAGVFKRHGQIGRPCLLGYIDKCSAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 C+G+V A +HR IV F DFLSG+TDR R LEQ+M A+E L+FERAAR+RDDL AL+R Sbjct 183 CVGKVSADEHRDIVEGFSDFLSGRTDRMVRRLEQEMAEASENLEFERAARMRDDLGALRR 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGIQL 302 AMEKQAVVLGDGTDADVVAFA+DELEAAVQ+FHVRGGRVRGQRGW+++K EP D+ QL Sbjct 243 AMEKQAVVLGDGTDADVVAFAEDELEAAVQIFHVRGGRVRGQRGWVIDKV-EPTDTE-QL 300 Query 303 VEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPR 362 VE+F++QFYG+Q AL AAD++ PVP+E+LVP LP+ L WLSGLRGS+V LRV + Sbjct 301 VERFVSQFYGEQHALAGAADDAMQPVPKEILVPVLPAEGAALERWLSGLRGSKVSLRVAQ 360 Query 363 RGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSH 422 RGDK+ LAETV RNA++A QHKL+RA D ARSAALQ IQ++L L APLRIEC+DVSH Sbjct 361 RGDKKDLAETVARNAKEAFAQHKLRRAGDLTARSAALQEIQENLELDQAPLRIECIDVSH 420 Query 423 VQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSD 482 VQGT+VV SLVVFEDGL RKS+YR F I++A+ QG DVA IAEV RRRF R L + +D Sbjct 421 VQGTNVVASLVVFEDGLARKSEYRRFEIKDASDQG---DVASIAEVVRRRFKRFLAETAD 477 Query 483 -PDL----------------LSPER-KSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVT 524 P+ + PE + ++FAYPPNL VVDG PQV+AA+A + ELG+T Sbjct 478 EPEPTAGSGEVAPGDTVRTGIDPETGRPKKFAYPPNLLVVDGAKPQVDAAAAELAELGIT 537 Query 525 DVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTA 584 DVAV GLAKRLEEVW+P + DP+I+ R SEGLYLLQRVRDEAHRFAITYHR +RS MTA Sbjct 538 DVAVCGLAKRLEEVWLPDDDDPVILSRTSEGLYLLQRVRDEAHRFAITYHRQRRSQGMTA 597 Query 585 SALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAVHDAL 637 SALD VPGLG RR+AL+ HFGS+ +L+ A V+EI VPG G TA V AL Sbjct 598 SALDGVPGLGPARRQALLKHFGSVRKLRAAGVEEIAGVPGFGRRTAETVVAAL 650 >gi|300784684|ref|YP_003764975.1| excinuclease ABC subunit C [Amycolatopsis mediterranei U32] gi|299794198|gb|ADJ44573.1| excinuclease ABC subunit C [Amycolatopsis mediterranei U32] gi|340526107|gb|AEK41312.1| excinuclease ABC subunit C [Amycolatopsis mediterranei S699] Length=632 Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/627 (72%), Positives = 513/627 (82%), Gaps = 10/627 (1%) Query 20 VYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTEVEAL 79 +Y+FRD RVIYVGKAKSLRSRL SYFAD++ L PRTRQ+VTTAA VEWTVV TEVEAL Sbjct 1 MYKFRDATKRVIYVGKAKSLRSRLNSYFADLSGLHPRTRQMVTTAASVEWTVVATEVEAL 60 Query 80 QLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYSHAWA 139 QLEY WIKEFDPRFNVRYRDDKSYPVLAVTL EEFPRL VYRG R+KGVRYFGPY+HAWA Sbjct 61 QLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEFPRLHVYRGARKKGVRYFGPYAHAWA 120 Query 140 IRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCIGRVDAAQHRQIVADF 199 IRETLDLL RVFPARTCSAGVF+RH QI RPCLLGYIDKCSAPC+GRV A +HR IV DF Sbjct 121 IRETLDLLLRVFPARTCSAGVFRRHGQIGRPCLLGYIDKCSAPCVGRVSADEHRDIVEDF 180 Query 200 CDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGTDADV 259 CDFL+GKTD + LE +M AA+E+L+FERAARLRDDL AL+RAMEKQAVVLGDGTDADV Sbjct 181 CDFLAGKTDVMIKRLETEMAAASEELEFERAARLRDDLGALRRAMEKQAVVLGDGTDADV 240 Query 260 VAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGIQLVEQFLTQFYGDQAALDD 319 VAFA D+LEAAVQVFHVRGGRVRGQRGW+++K E LV+ FLTQFYGD+A LD Sbjct 241 VAFAHDDLEAAVQVFHVRGGRVRGQRGWVIDKAEEMDVPA--LVDHFLTQFYGDEAELDA 298 Query 320 AADESANP-VPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAE 378 D A P VPREVLVP LP++AE +A WL+GLRGSRV LRVP+RGDK+ALAETV RNA Sbjct 299 RDDVDAGPVVPREVLVPELPADAEAVAEWLTGLRGSRVQLRVPQRGDKKALAETVQRNAG 358 Query 379 DALQQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDG 438 +A QHKL+RA D ARSAAL +Q+ L L APLRIEC+D+SH+QG+DVV SLVVFEDG Sbjct 359 EAFTQHKLRRAGDLTARSAALTELQEFLALDTAPLRIECIDISHIQGSDVVASLVVFEDG 418 Query 439 LPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLR----DQSDPDLLSPERKSRR 494 L RKS+YR F +REAA +G DVA IAEV RRRF R+L+ + S P L + ++ Sbjct 419 LARKSEYRRFALREAATEG---DVASIAEVVRRRFYRYLKETAEESSTPGLDPETGRPKK 475 Query 495 FAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSE 554 FAYPPNL VVDG PQ AA+ V+ ELG+TD++VIGLAKRLEEVW+P++PDP+I+PR SE Sbjct 476 FAYPPNLLVVDGAGPQATAAADVLAELGITDISVIGLAKRLEEVWLPADPDPVILPRTSE 535 Query 555 GLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEA 614 GLYLLQR+RDEAHRFAI YHR KRS R+ S LDSVPGLG+ RR AL+ HFGS+ +LK+A Sbjct 536 GLYLLQRLRDEAHRFAIAYHREKRSKRLVTSELDSVPGLGQARRTALIKHFGSVKKLKQA 595 Query 615 TVDEITAVPGIGVATATAVHDALRPDS 641 ++EI AVPG G TA AV AL +S Sbjct 596 RIEEIEAVPGFGRRTAEAVVAALAGES 622 >gi|258652974|ref|YP_003202130.1| excinuclease ABCsubunit C [Nakamurella multipartita DSM 44233] gi|258556199|gb|ACV79141.1| excinuclease ABC, C subunit [Nakamurella multipartita DSM 44233] Length=679 Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/666 (67%), Positives = 508/666 (77%), Gaps = 38/666 (5%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 +PDPA YRPAPG+IP PGVY+FRD GRVIYVGKAKSLR RL SYFAD+A+L PRTRQ+ Sbjct 1 MPDPAVYRPAPGTIPESPGVYKFRDPKGRVIYVGKAKSLRQRLNSYFADIAALHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VT+A VEWTVV TEVEALQLEY WIKEFDPRFNVRYRDDKSYP LAVT+GEE+PRL V Sbjct 61 VTSAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPFLAVTVGEEYPRLQVM 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RG RKGVRYFGPY+HAWAIRETLDLL RVFPARTCSAGVF+R QI RPCLLGYI KCS Sbjct 121 RGAHRKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSAGVFRRSAQIGRPCLLGYIGKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV A +HR+IV FCDF++GK D R LE+QM AAA LDFERAARLRDDLSA+ Sbjct 181 APCVGRVSAQEHREIVEGFCDFMAGKADPLIRRLEKQMTAAAADLDFERAARLRDDLSAV 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWI------VEKPGE 294 +RA+EKQAVV GDGTDADV+ A DEL A+VQ+FHVR GRVRG+RGWI V+ G Sbjct 241 RRAVEKQAVVFGDGTDADVIGIAADELLASVQLFHVRDGRVRGERGWIVDVDADVDADGN 300 Query 295 PGDSGIQLVEQFLTQFYGDQAALDDAADESANPVPREVLVPCLPS----NAEELASWLSG 350 D LVE FL QFYGD AA DA +++ VPRE+LVP LPS +E+ WLS Sbjct 301 DRDGLPLLVENFLLQFYGDLAADGDAGGPTSS-VPREILVPVLPSQDAGTHDEMVDWLSA 359 Query 351 LRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLAD 410 LRGSRV LRV +RGDKRALAETV RNA++AL +H+LKRA D ARSAAL + ++LG+ Sbjct 360 LRGSRVSLRVAQRGDKRALAETVARNAQEALTRHRLKRAGDLTARSAALSELGETLGMDV 419 Query 411 APLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTR 470 APLRIEC+D+SHVQGTDVV SLVVFEDGL ++SDYR F IR+ G DDVA IAEV R Sbjct 420 APLRIECIDISHVQGTDVVASLVVFEDGLAKRSDYRRFAIRDKPG----DDVASIAEVVR 475 Query 471 RRFLRHLRDQSD----------------------PDLLSPER-KSRRFAYPPNLYVVDGG 507 RRF R ++ P + P + RRFAYPP L VVDGG Sbjct 476 RRFTHQARAEAGERAEADSTPAPTPTPTPAGSGVPAGIDPTTGRVRRFAYPPQLLVVDGG 535 Query 508 APQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAH 567 APQVNAA+ V+ ELG+ D+ V GLAKRLEEVW+P + DP+I PR SE LYLLQR+RDEAH Sbjct 536 APQVNAAATVLSELGIVDITVCGLAKRLEEVWLPFQADPVIFPRTSEALYLLQRLRDEAH 595 Query 568 RFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGV 627 RFAITYHR+KRS MT SALD+VPGLGE RRKALV HFGS+A L+ A V++I VPG+G Sbjct 596 RFAITYHRAKRSKSMTVSALDNVPGLGEVRRKALVRHFGSVAALRRADVEQILQVPGVGR 655 Query 628 ATATAV 633 TA AV Sbjct 656 RTAEAV 661 >gi|334696949|gb|AEG81746.1| UvrABC system protein C [Corynebacterium ulcerans 809] Length=675 Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/675 (62%), Positives = 512/675 (76%), Gaps = 35/675 (5%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 + DP+TYRPAPGSIP +PGVY+FRD HGRV+YVGKAK+LRSRL++YF D++ L PRTRQ+ Sbjct 1 MADPSTYRPAPGSIPTDPGVYKFRDSHGRVVYVGKAKNLRSRLSNYFQDLSVLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA+ VEWTVV +EVEALQLEYTWIK+FDPRFNV+YRDDK+YPVLAV++GE FPR Y Sbjct 61 VTTASSVEWTVVSSEVEALQLEYTWIKKFDPRFNVKYRDDKTYPVLAVSVGERFPRAFFY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGP+RKG+RYFGPYSHAWA+RETLDLLTRVFP RTCS GVF RH + RPCLLGYIDKCS Sbjct 121 RGPQRKGIRYFGPYSHAWAVRETLDLLTRVFPVRTCSKGVFNRHESLGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV +HR IV FC F++GKTD +L QM AAE LDFERAARLRDDL A+ Sbjct 181 APCVGRVTEQEHRDIVNGFCSFMAGKTDAVVASLNSQMLTAAEDLDFERAARLRDDLQAV 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 ++ E+QAVVLGDGTDADV+A + D+LEA++Q+FHVR GR++GQRGWIVE+ + Sbjct 241 QKITEQQAVVLGDGTDADVIAISADDLEASIQLFHVRAGRIKGQRGWIVERTDNSKEELQ 300 Query 301 QLVEQFLTQFYGDQAAL-DDAADESAN------------------------PVPREVLVP 335 +L++ FL +FY D L ++ + E AN VP+EVLV Sbjct 301 ELLQAFLIRFYSDAVQLEEETSKEEANVVRRGVDQFSYVDEHLSSYQLRGSMVPKEVLVE 360 Query 336 CLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNAR 395 P + E LS LRGS V LRVP RGDKRAL ETVH NA +AL+QHKLKR D AR Sbjct 361 IEPLDMEHTKVVLSQLRGSSVDLRVPARGDKRALTETVHANAVEALRQHKLKRVGDLTAR 420 Query 396 SAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAG 455 SAALQ +Q++L L +APLRIEC+D+SH+QGTDVV SLVVFEDGLP+KSDYR + I++AAG Sbjct 421 SAALQELQEALFLEEAPLRIECIDISHIQGTDVVASLVVFEDGLPKKSDYRRYKIKDAAG 480 Query 456 QGRSDDVACIAEVTRRRFLRHLRD--------QSDPDLLSPE--RKSRRFAYPPNLYVVD 505 G S+DVA IAEV RRRF+RH +D + D S E S+RFAYPP L++VD Sbjct 481 DGHSNDVASIAEVVRRRFIRHNKDKLVVPEAEEFDGSTFSDETVEHSKRFAYPPQLFIVD 540 Query 506 GGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDE 565 GGAPQV +A V +ELGV DVA++G+AKRLEE+WVP + +P+I+PRNS+ +YL+Q++RDE Sbjct 541 GGAPQVASADEVFEELGVHDVALVGIAKRLEELWVPQDDEPVILPRNSQAMYLIQQIRDE 600 Query 566 AHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGI 625 AHRFAIT+HR +RS RM ASALD + GLG+ RR LV HFGS+ +LK A+V++I AV G Sbjct 601 AHRFAITFHRQQRSKRMRASALDGIKGLGQARRSELVKHFGSVKKLKAASVEDIAAVKGF 660 Query 626 GVATATAVHDALRPD 640 G A V DALR + Sbjct 661 GPRLAQNVFDALRAE 675 >gi|337290834|ref|YP_004629855.1| UvrABC system protein C [Corynebacterium ulcerans BR-AD22] gi|334699140|gb|AEG83936.1| UvrABC system protein C [Corynebacterium ulcerans BR-AD22] Length=675 Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/675 (62%), Positives = 512/675 (76%), Gaps = 35/675 (5%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 + DP+TYRPAPGSIP +PGVY+FRD HGRV+YVGKAK+LRSRL++YF D++ L PRTRQ+ Sbjct 1 MADPSTYRPAPGSIPTDPGVYKFRDSHGRVVYVGKAKNLRSRLSNYFQDLSVLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA+ VEWTVV +EVEALQLEYTWIK+FDPRFNV+YRDDK+YPVLAV++GE FPR Y Sbjct 61 VTTASSVEWTVVSSEVEALQLEYTWIKKFDPRFNVKYRDDKTYPVLAVSVGERFPRAFFY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGP+RKG+RYFGPYSHAWA+RETLDLLTRVFP RTCS GVF RH + RPCLLGYIDKCS Sbjct 121 RGPQRKGIRYFGPYSHAWAVRETLDLLTRVFPVRTCSKGVFNRHESLGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APC+GRV +HR IV FC F++GKTD +L QM AAE LDFERAARLRDDL A+ Sbjct 181 APCVGRVTEQEHRDIVNGFCSFMAGKTDAVVASLNSQMLIAAEDLDFERAARLRDDLQAV 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 ++ E+QAVVLGDGTDADV+A + D+LEA++Q+FHVR GR++GQRGWIVE+ + Sbjct 241 QKITEQQAVVLGDGTDADVIAISADDLEASIQLFHVRAGRIKGQRGWIVERTDNSKEELQ 300 Query 301 QLVEQFLTQFYGDQAAL-DDAADESAN------------------------PVPREVLVP 335 +L++ FL +FY D L ++ + E AN VP+EVLV Sbjct 301 ELLQAFLIRFYSDAVQLEEETSKEEANVVRRGVDQFSYVDEHLSSYQLRGSMVPKEVLVE 360 Query 336 CLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNAR 395 P + E LS LRGS V LRVP RGDKRAL ETVH NA +AL+QHKLKR D AR Sbjct 361 IEPLDMEHTKVVLSQLRGSSVDLRVPARGDKRALTETVHANAVEALRQHKLKRVGDLTAR 420 Query 396 SAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAG 455 SAALQ +Q++L L +APLRIEC+D+SH+QGTDVV SLVVFEDGLP+KSDYR + I++AAG Sbjct 421 SAALQELQEALFLEEAPLRIECIDISHIQGTDVVASLVVFEDGLPKKSDYRRYKIKDAAG 480 Query 456 QGRSDDVACIAEVTRRRFLRHLRD--------QSDPDLLSPE--RKSRRFAYPPNLYVVD 505 G S+DVA IAEV RRRF+RH +D + D S E S+RFAYPP L++VD Sbjct 481 DGHSNDVASIAEVVRRRFIRHNKDKLVVPEAEEFDGSTFSDETVEHSKRFAYPPQLFIVD 540 Query 506 GGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDE 565 GGAPQV +A V +ELGV DVA++G+AKRLEE+WVP + +P+I+PRNS+ +YL+Q++RDE Sbjct 541 GGAPQVASADEVFEELGVHDVALVGIAKRLEELWVPQDDEPVILPRNSQAMYLIQQIRDE 600 Query 566 AHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGI 625 AHRFAIT+HR +RS RM ASALD + GLG+ RR LV HFGS+ +LK A+V++I AV G Sbjct 601 AHRFAITFHRQQRSKRMRASALDGIKGLGQARRSELVKHFGSVKKLKAASVEDIAAVKGF 660 Query 626 GVATATAVHDALRPD 640 G A V DALR + Sbjct 661 GPRLAQNVFDALRAE 675 >gi|300858531|ref|YP_003783514.1| UvrABC system protein C [Corynebacterium pseudotuberculosis FRC41] gi|300685985|gb|ADK28907.1| UvrABC system protein C [Corynebacterium pseudotuberculosis FRC41] gi|302206243|gb|ADL10585.1| UvrABC system protein C [Corynebacterium pseudotuberculosis C231] Length=675 Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/675 (62%), Positives = 512/675 (76%), Gaps = 35/675 (5%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 + DP+TYRP PGSIP +PGVY+FRD HGRV+YVGKAK+LRSRL++YF D++ L PRTRQ+ Sbjct 1 MADPSTYRPTPGSIPTDPGVYKFRDSHGRVVYVGKAKNLRSRLSNYFQDLSVLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA+ VEWTVV +EVEALQLEYTWIK+FDPRFNV+YRDDK+YP+LAV++GE FPR Y Sbjct 61 VTTASSVEWTVVSSEVEALQLEYTWIKKFDPRFNVKYRDDKTYPMLAVSVGERFPRAFFY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGP+RKGVRYFGPYSHAWA+RETLDLLTRVFP RTCS GVF RH + RPCLLGYIDKCS Sbjct 121 RGPQRKGVRYFGPYSHAWAVRETLDLLTRVFPVRTCSKGVFNRHESLGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV +HR IV FC F++GKTD +L QM AAE+LDFERAARLRDD+ A+ Sbjct 181 APCIGRVTEQEHRDIVNGFCSFMAGKTDAVVASLNSQMLTAAEELDFERAARLRDDIHAV 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 ++ E+QAVVLGDGTDADV+A + D+LEA++Q+FHVR GRV+GQRGWIVE+ G+ + Sbjct 241 QKITEQQAVVLGDGTDADVIAISADDLEASIQLFHVRAGRVKGQRGWIVERTGDSEEELQ 300 Query 301 QLVEQFLTQFYG---------------------DQAALDDAADES----ANPVPREVLVP 335 +L++ FL +FY DQ + D S + +P+EVLV Sbjct 301 ELLQAFLIRFYTDAVELEEETNKEEENVIRRGVDQFSYVDEHLSSHQLRGSMIPKEVLVE 360 Query 336 CLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNAR 395 P + E LS LRGS V LRVP RGDKRAL ETVH NA + L+QHKLKR D AR Sbjct 361 IAPLDLEHTKVALSELRGSLVDLRVPARGDKRALMETVHANAVETLRQHKLKRVGDLTAR 420 Query 396 SAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAG 455 SAALQ +Q++L L +APLRIEC+D+SH+QGTDVV SLVVFEDGLP+KSDYR + I++AAG Sbjct 421 SAALQELQEALFLEEAPLRIECIDISHIQGTDVVASLVVFEDGLPKKSDYRRYKIKDAAG 480 Query 456 QGRSDDVACIAEVTRRRFLRHLRD--------QSDPDLLSPE--RKSRRFAYPPNLYVVD 505 G S+DVA IAEV RRRF+RH +D + D + E S+RFAYPP L++VD Sbjct 481 DGHSNDVASIAEVVRRRFIRHHKDRLTVPEAEEFDGSTFTDETVEHSKRFAYPPQLFIVD 540 Query 506 GGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDE 565 GG+PQV AA A+ +ELGV DVA++G+AKRLEE+W+P + +P+I+PRNS+ +YL+Q++RDE Sbjct 541 GGSPQVAAADAIFEELGVNDVALVGIAKRLEELWIPQDDEPVILPRNSQAMYLVQQIRDE 600 Query 566 AHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGI 625 AHRFAI +HR +RS RM SALD++ GLG+ RR LV HFGS+ +LK A+V+EITAV G Sbjct 601 AHRFAIAFHRQQRSKRMRTSALDNIKGLGQTRRTELVKHFGSVKKLKAASVEEITAVKGF 660 Query 626 GVATATAVHDALRPD 640 G A V DALR + Sbjct 661 GPQLAQNVFDALRAE 675 >gi|308276485|gb|ADO26384.1| UvrABC system protein C [Corynebacterium pseudotuberculosis I19] Length=675 Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/675 (62%), Positives = 511/675 (76%), Gaps = 35/675 (5%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 + DP+TYRP PGSIP +PGVY+FRD HGRV+YVGKAK+LRSRL++YF D++ L PRTRQ+ Sbjct 1 MADPSTYRPTPGSIPTDPGVYKFRDSHGRVVYVGKAKNLRSRLSNYFQDLSVLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA+ VEWTVV +EVEALQLEYTWIK+FDPRFNV+YRDDK+YP+LAV++GE FPR Y Sbjct 61 VTTASSVEWTVVSSEVEALQLEYTWIKKFDPRFNVKYRDDKTYPMLAVSVGERFPRAFFY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGP+RKGVRYFGPYSHAWA+RETLDLLTRVFP RTCS GVF RH + RPCLLGYIDKCS Sbjct 121 RGPQRKGVRYFGPYSHAWAVRETLDLLTRVFPVRTCSKGVFNRHESLGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV +HR IV FC F++GKTD +L QM AAE+LDFERAARLRDD+ A+ Sbjct 181 APCIGRVTEQEHRDIVNGFCSFMAGKTDAVVASLNSQMLTAAEELDFERAARLRDDIHAV 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 ++ E+QAVVLGDGTDADV+A + D+LEA++Q+FHVR GRV+GQRGWIVE+ G+ + Sbjct 241 QKITEQQAVVLGDGTDADVIAISADDLEASIQLFHVRAGRVKGQRGWIVERTGDSEEELQ 300 Query 301 QLVEQFLTQFYG---------------------DQAALDDAADES----ANPVPREVLVP 335 +L++ FL +FY DQ + D S + +P+EVLV Sbjct 301 ELLQAFLIRFYTDAVELEEETNKEEENVIRRGVDQFSYVDEHLSSHQLRGSMIPKEVLVE 360 Query 336 CLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNAR 395 P + E LS LRGS V LRVP RGDKRAL ETVH NA + L+QHKLKR D AR Sbjct 361 IAPLDLEHTKVALSELRGSLVDLRVPARGDKRALMETVHANAVETLRQHKLKRVGDLTAR 420 Query 396 SAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAG 455 SAALQ +Q++L L +APLRIEC+D+SH+QGTDVV SLVVFEDGLP+KSDYR + I++AAG Sbjct 421 SAALQELQEALFLEEAPLRIECIDISHIQGTDVVASLVVFEDGLPKKSDYRRYKIKDAAG 480 Query 456 QGRSDDVACIAEVTRRRFLRHLRD--------QSDPDLLSPE--RKSRRFAYPPNLYVVD 505 G S+DV IAEV RRRF+RH +D + D + E S+RFAYPP L++VD Sbjct 481 DGHSNDVVSIAEVVRRRFIRHHKDRLTVPEAEEFDGSTFTDETVEHSKRFAYPPQLFIVD 540 Query 506 GGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDE 565 GG+PQV AA A+ +ELGV DVA++G+AKRLEE+W+P + +P+I+PRNS+ +YL+Q++RDE Sbjct 541 GGSPQVAAADAIFEELGVNDVALVGIAKRLEELWIPQDDEPVILPRNSQAMYLVQQIRDE 600 Query 566 AHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGI 625 AHRFAI +HR +RS RM SALD++ GLG+ RR LV HFGS+ +LK A+V+EITAV G Sbjct 601 AHRFAIAFHRQQRSKRMRTSALDNIKGLGQTRRTELVKHFGSVKKLKAASVEEITAVKGF 660 Query 626 GVATATAVHDALRPD 640 G A V DALR + Sbjct 661 GPQLAQNVFDALRAE 675 >gi|227504395|ref|ZP_03934444.1| excinuclease ABC subunit C [Corynebacterium striatum ATCC 6940] gi|227199043|gb|EEI79091.1| excinuclease ABC subunit C [Corynebacterium striatum ATCC 6940] Length=683 Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/679 (62%), Positives = 505/679 (75%), Gaps = 44/679 (6%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP TYRPAPG+IP EPGVY+FRD++ RVIYVGKAK+LR+RL++YF D+ L PRTRQ+V Sbjct 3 DPTTYRPAPGTIPTEPGVYKFRDENRRVIYVGKAKNLRARLSNYFQDITQLHPRTRQMVL 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 TAA VEWTVV +EVEALQLEYTWIK FDPRFNV YRDDK+YP+LAV++GE PR YRG Sbjct 63 TAASVEWTVVASEVEALQLEYTWIKRFDPRFNVMYRDDKTYPMLAVSVGEAVPRAFFYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 PRRKGVRYFGPYSHAWA+RETLDLLTRVFP RTC+ GV+ RH ++ RPCLLGYI KC AP Sbjct 123 PRRKGVRYFGPYSHAWAVRETLDLLTRVFPMRTCAKGVYNRHERLGRPCLLGYIGKCDAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 CIGRV +HR+ V + F++G T + R L Q+M AAE L+FE AARLRDDL A+ + Sbjct 183 CIGRVSKDEHRETVNELVSFMNGNTSKVTRELTQRMEEAAENLEFELAARLRDDLGAINK 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPG-----EPGD 297 ME+QAVV GDGTDAD++AF+ DELEAAVQ+FHVR GR+RGQRGW+VE+ G EP + Sbjct 243 IMEQQAVVFGDGTDADLIAFSSDELEAAVQIFHVRNGRIRGQRGWVVERSGDQAPLEPLE 302 Query 298 SGI------QLVEQFLTQFYGD------QAALDDAA-------------DESANPVPREV 332 G L++ FL QFY D Q +DAA + N +PRE+ Sbjct 303 EGKPDPGLPALMQNFLIQFYSDAADRQKQELEEDAALNRRGVDQESHTEEHLGNVIPREI 362 Query 333 LVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDF 392 LV +P A E+ S L LRG+ V LRVP+RGDKR+L ETV +NA++ L+QHKLKR D Sbjct 363 LVQAMPDEAAEVKSLLEQLRGAHVDLRVPQRGDKRSLMETVEKNAKEQLRQHKLKRVGDI 422 Query 393 NARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIRE 452 ARSAALQ IQ++LG+ APLRIEC D+SH+QGTDVV SLVVFEDGLPRKSDYR + I+E Sbjct 423 TARSAALQDIQEALGMDQAPLRIECTDISHIQGTDVVASLVVFEDGLPRKSDYRRYRIKE 482 Query 453 AAGQGRSDDVACIAEVTRRRFLRHLRDQ-SDPDLLSPE-------------RKSRRFAYP 498 AAG GRSDDV IAEVTRRRF RH D+ ++PD E RRFAYP Sbjct 483 AAGDGRSDDVGSIAEVTRRRFKRHNEDKLANPDEEVEESTFADEKVTEESAEAGRRFAYP 542 Query 499 PNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYL 558 P L++VDGGAPQV AA V DELG+ DV ++GLAKRLEE+WVP + +P+I+PRNS+ L+L Sbjct 543 PQLFIVDGGAPQVAAAQEVFDELGIVDVTLVGLAKRLEEIWVPGDDEPVILPRNSQALFL 602 Query 559 LQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDE 618 LQ++RDEAHRFAITYHR +RS RM +S LDSVPGLG RR LV HFGS+ +LKEA+V++ Sbjct 603 LQQIRDEAHRFAITYHRQQRSKRMRSSVLDSVPGLGPQRRTDLVKHFGSVKKLKEASVEQ 662 Query 619 ITAVPGIGVATATAVHDAL 637 I AV G G A+ V + L Sbjct 663 IAAVKGFGPKLASVVFEHL 681 >gi|341824925|gb|AEK92446.1| UvrABC system protein C [Corynebacterium pseudotuberculosis PAT10] Length=674 Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/675 (62%), Positives = 512/675 (76%), Gaps = 36/675 (5%) Query 1 VPDPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQL 60 + DP+TYRP PGSIP +PGVY+FRD HGRV+YVGKAK+LRSRL++YF D++ L PRTRQ+ Sbjct 1 MADPSTYRPTPGSIPTDPGVYKFRDSHGRVVYVGKAKNLRSRLSNYFQDLSVLHPRTRQM 60 Query 61 VTTAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVY 120 VTTA+ VEWTVV +EVEALQLEYTWIK+FDPRFNV+YRDDK+YP+LAV++GE FPR Y Sbjct 61 VTTASSVEWTVVSSEVEALQLEYTWIKKFDPRFNVKYRDDKTYPMLAVSVGERFPRAFFY 120 Query 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS 180 RGP+RKGVRYFGPYSHAWA+RETLDLLTRVFP RTCS GVF RH + RPCLLGYIDKCS Sbjct 121 RGPQRKGVRYFGPYSHAWAVRETLDLLTRVFPVRTCSKGVFNRHESLGRPCLLGYIDKCS 180 Query 181 APCIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSAL 240 APCIGRV +HR IV FC F++GKTD +L QM AAE+LDFERAARLRDD+ A+ Sbjct 181 APCIGRVTEQEHRDIVNGFCSFMAGKTDAVVASLNSQMLTAAEELDFERAARLRDDIHAV 240 Query 241 KRAMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGI 300 ++ E+QAVVLGDGTDADV+A + D+LEA++Q+FHVR GRV+GQRGWIVE+ G+ + Sbjct 241 QKITEQQAVVLGDGTDADVIAISADDLEASIQLFHVRAGRVKGQRGWIVERTGDSEEELQ 300 Query 301 QLVEQFLTQFYG---------------------DQAALDDAADES----ANPVPREVLVP 335 +L++ FL +FY DQ + D S + +P+EVLV Sbjct 301 ELLQAFLIRFYTDAVELEEETNKEEENVIRRGVDQFSYVDEHLSSHQLRGSMIPKEVLVE 360 Query 336 CLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNAR 395 P + E LS LRGS V LRVP RGDKRAL ETVH NA + L+QHKLKR D AR Sbjct 361 IAPLDLEHTKVALSELRGSLVDLRVPARGDKRALMETVHANAVETLRQHKLKRVGDLTAR 420 Query 396 SAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAG 455 SAALQ +Q++L L +APLRIEC+D+SH+QGTDVV SLVVFEDGLP+KSDYR + I++AAG Sbjct 421 SAALQELQEALFLEEAPLRIECIDISHIQGTDVVASLVVFEDGLPKKSDYRRYKIKDAAG 480 Query 456 QGRSDDVACIAEVTRRRFLRHLRD--------QSDPDLLSPE--RKSRRFAYPPNLYVVD 505 G S+DVA IAEV RRRF+RH +D + D + E S+RFAYPP L++VD Sbjct 481 DGHSNDVASIAEVVRRRFIRHHKDRLTVPEAEEFDGSTFTDETVEHSKRFAYPPQLFIVD 540 Query 506 GGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDE 565 GG+PQV AA A+ +ELGV DVA++G+AKRLEE+W+P + +P+I+PRNS+ +YL+Q++RDE Sbjct 541 GGSPQV-AADAIFEELGVNDVALVGIAKRLEELWIPQDDEPVILPRNSQAMYLVQQIRDE 599 Query 566 AHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGI 625 AHRFAI +HR +RS RM SALD++ GLG+ RR LV HFGS+ +LK A+V+EITAV G Sbjct 600 AHRFAIAFHRQQRSKRMRTSALDNIKGLGQTRRTELVKHFGSVKKLKAASVEEITAVKGF 659 Query 626 GVATATAVHDALRPD 640 G A V DALR + Sbjct 660 GPQLAQNVFDALRAE 674 >gi|25028267|ref|NP_738321.1| excinuclease ABC subunit C [Corynebacterium efficiens YS-314] gi|259507326|ref|ZP_05750226.1| excinuclease ABC, subunit C [Corynebacterium efficiens YS-314] gi|81750450|sp|Q8FT60.1|UVRC_COREF RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName: Full=Excinuclease ABC subunit C gi|23493551|dbj|BAC18521.1| putative excinuclease ABC subunit C [Corynebacterium efficiens YS-314] gi|259165130|gb|EEW49684.1| excinuclease ABC, subunit C [Corynebacterium efficiens YS-314] Length=681 Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/677 (64%), Positives = 506/677 (75%), Gaps = 40/677 (5%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP TYRPAPG+IP EPGVY+FRD RVIYVGKAK+LR+RL++YF DV L PRTRQ+V Sbjct 3 DPTTYRPAPGTIPTEPGVYKFRDDARRVIYVGKAKNLRARLSNYFQDVTQLHPRTRQMVF 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 A+ VEWTVVG+EVEALQLEYTWIK FDPRFNV+YRDDKSYP+LAV+ GE FPR YRG Sbjct 63 AASSVEWTVVGSEVEALQLEYTWIKRFDPRFNVKYRDDKSYPMLAVSTGERFPRAFFYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 PRRKGVRY+GPYSHAWA+RETLDLL RVFP RTCS GVF RH + RPCLLGYIDKC+AP Sbjct 123 PRRKGVRYYGPYSHAWAVRETLDLLIRVFPMRTCSKGVFNRHENLGRPCLLGYIDKCAAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 C+GRV +HR+IV FC F+SG TD+ R L +M AA+E+LDFERAARLRDDL A+ + Sbjct 183 CVGRVSEEEHREIVEGFCSFMSGHTDKVTRELTAEMMAASEELDFERAARLRDDLGAINK 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGE---PGDSG 299 MEKQAVVLGDGTDAD++AFA DELEAAVQ+FHVRGGR+RGQRGW+VEK G+ P DS Sbjct 243 VMEKQAVVLGDGTDADIIAFATDELEAAVQIFHVRGGRIRGQRGWVVEKTGDWDLPDDSD 302 Query 300 IQ--------LVEQFLTQFYGDQA-----------------ALDDAADESANPVPREVLV 334 + L++ FL QFYGD +D + + VPRE+LV Sbjct 303 AEGPDPALPHLMQHFLVQFYGDAVERAESEAAEDAEHIERRGVDQYREATPAVVPREILV 362 Query 335 PCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNA 394 P A+E L LRG+ V LRVP+RGDKR+L ETV +NA + L+QHK+KR D A Sbjct 363 QVEPHEAQETRKVLEELRGAGVDLRVPQRGDKRSLMETVEKNAREQLKQHKIKRVGDLTA 422 Query 395 RSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAA 454 RSAALQ IQ++L + APLRIEC D+SH+QGTDVV SLVVFEDGLPRKSDYR + I+EAA Sbjct 423 RSAALQDIQEALDMEQAPLRIECTDISHIQGTDVVASLVVFEDGLPRKSDYRRYRIKEAA 482 Query 455 GQGRSDDVACIAEVTRRRFLRHLRDQ------------SDPDLLSPERKSRRFAYPPNLY 502 G G S+DVA IAEVTRRRFLRH RD+ SD + +RRFAYPP L+ Sbjct 483 GDGHSNDVASIAEVTRRRFLRHHRDKLAVPEELDDATFSDEKVEEMSTDNRRFAYPPQLF 542 Query 503 VVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRV 562 +VDGGAPQV AA V DELG+ DV ++GLAKRLEE+W+P +PDP+I+PRNS L+LLQ+V Sbjct 543 IVDGGAPQVAAAQEVFDELGIVDVTLVGLAKRLEEIWLPGDPDPVILPRNSPALFLLQQV 602 Query 563 RDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAV 622 RDEAHRFAITYHR +RS RM S LD + GLG+ RR LV HFGS+ARL+EATV +I V Sbjct 603 RDEAHRFAITYHRQQRSKRMRVSELDDIRGLGQARRTELVKHFGSVARLREATVGDIAGV 662 Query 623 PGIGVATATAVHDALRP 639 G G A +V +AL P Sbjct 663 RGFGPKLAQSVFEALHP 679 >gi|319948952|ref|ZP_08023057.1| excinuclease ABC subunit C [Dietzia cinnamea P4] gi|319437390|gb|EFV92405.1| excinuclease ABC subunit C [Dietzia cinnamea P4] Length=709 Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/656 (67%), Positives = 512/656 (79%), Gaps = 28/656 (4%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP +YRPAPGSIP EPGVYRFRD+HGRVIYVG AK+LRSRL+SYFAD++ L PRTRQ+VT Sbjct 3 DPRSYRPAPGSIPTEPGVYRFRDEHGRVIYVGTAKNLRSRLSSYFADLSLLHPRTRQMVT 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 +AA V+WTVV TEVEALQLEYTWIK++DPRFNVRYRDDK+YP+LAVT+GEE PR VYRG Sbjct 63 SAAGVQWTVVSTEVEALQLEYTWIKKYDPRFNVRYRDDKTYPMLAVTVGEEVPRAFVYRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 PRR G RYFGPYSHAWAIR+TLD L RVFP R+CSAGV+KR Q+ RPCLLGYIDKC+AP Sbjct 123 PRRPGTRYFGPYSHAWAIRDTLDTLQRVFPVRSCSAGVYKRQAQLGRPCLLGYIDKCAAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 CIGRV +HR IV + DFL+G+TD R +E+QM A+ LDFERAARLRDDL A++R Sbjct 183 CIGRVTPDEHRLIVNELIDFLAGRTDAIMRRIEKQMMEASADLDFERAARLRDDLGAMRR 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSG--- 299 AMEKQAVVLGDGTDADVV DEL+ +VQVFHVRGGR+RGQRGW+VE + G Sbjct 243 AMEKQAVVLGDGTDADVVGVEVDELQVSVQVFHVRGGRIRGQRGWVVEHAHGIDEDGEFD 302 Query 300 -----IQLVEQFLTQFYGDQAALDDAADES--ANPVPREVLVPCLPSNAEELASWLSGLR 352 +V +L QFYG +A L +AA+ A+ VPREVLVP LP +++ELA WLSGLR Sbjct 303 AARAIPGVVSDYLAQFYGGEADLAEAAESGDIASAVPREVLVPALPEDSDELADWLSGLR 362 Query 353 GSRVVLRVPRRGDKRALAETVHRNAEDALQQHKLKRASDFNARSAALQSIQDSLGLADAP 412 GSRV LRVP+RGDKRALAETVHRNA +AL QHKL+R+ D ARSAALQ IQ++L L AP Sbjct 363 GSRVSLRVPQRGDKRALAETVHRNAVEALTQHKLRRSGDLTARSAALQEIQETLELDSAP 422 Query 413 LRIECVDVSHVQGTDVVGSLVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRR 472 LRIECVD+SH QGTDV+ SLVVFEDG+PRKSDYR + IR+AAG G SDDVA IAEVTRRR Sbjct 423 LRIECVDISHTQGTDVMASLVVFEDGIPRKSDYRLYRIRDAAGDGHSDDVASIAEVTRRR 482 Query 473 FLRHLRDQS---------------DPDLLSPERKSRRFAYPPNLYVVDGGAPQVNAASAV 517 F RH D + DP+ P +RRFAYPP L+VVDGG PQV AA+ V Sbjct 483 FRRHHEDPALTPDETDGPVDDEPGDPEAAPP---ARRFAYPPQLFVVDGGRPQVEAAAEV 539 Query 518 IDELGVTDVAVIGLAKRLEEVWVPSEPDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSK 577 + ELGVTDV VIG+AKRLEE+W+P E P+I PR+ EGL+LLQR+RDEAHRFAI HR Sbjct 540 LSELGVTDVPVIGIAKRLEEIWLPGEEYPVIFPRHGEGLFLLQRLRDEAHRFAIRAHRGA 599 Query 578 RSTRMTASALDSVPGLGEHRRKALVTHFGSIARLKEATVDEITAVPGIGVATATAV 633 RS RMTAS LD VPGLG RR ALV F +++ L+ A+V+++ VPGIG A ++ Sbjct 600 RSKRMTASVLDDVPGLGPARRAALVEKFPTVSALRAASVEDLCTVPGIGPGVAASI 655 >gi|344044961|gb|EGV40635.1| excinuclease ABC subunit C [Corynebacterium glutamicum S9114] Length=696 Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/690 (62%), Positives = 512/690 (75%), Gaps = 55/690 (7%) Query 3 DPATYRPAPGSIPVEPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVT 62 DP TYRPAPG+IP EPGVY+FRD++ RVIYVGKAK+LRSRL++YF DV L PRTRQ+V Sbjct 3 DPTTYRPAPGTIPTEPGVYKFRDENRRVIYVGKAKNLRSRLSNYFQDVTQLHPRTRQMVF 62 Query 63 TAAKVEWTVVGTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRG 122 A+ VEWTVV +EVEALQLEYTWIK FDPRFNV+YRDDK+YP+LAV+ GE FPR +RG Sbjct 63 AASSVEWTVVSSEVEALQLEYTWIKRFDPRFNVKYRDDKTYPMLAVSTGERFPRAFFFRG 122 Query 123 PRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAP 182 PRRKGVRYFGPYSHAWA+RETLDLLTRVFP RTCS GVF RH + RPCLLGYIDKC+AP Sbjct 123 PRRKGVRYFGPYSHAWAVRETLDLLTRVFPMRTCSKGVFNRHESLGRPCLLGYIDKCAAP 182 Query 183 CIGRVDAAQHRQIVADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKR 242 C+GRV +HR+IV F F+SG TD+ R L M AAAE+LDFERAARLRDDL A+ + Sbjct 183 CVGRVSEEEHREIVDGFTSFMSGHTDKVTRKLNADMMAAAEELDFERAARLRDDLEAIDK 242 Query 243 AMEKQAVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPG----DS 298 MEKQAVVLGDGTDAD++AFA D+LEAAVQVF++RGGR+RGQRGW+VEKPG+ D+ Sbjct 243 VMEKQAVVLGDGTDADIIAFATDQLEAAVQVFNIRGGRIRGQRGWVVEKPGDYAGLLVDA 302 Query 299 GIQ--------------LVEQFLTQFYGDQA-----------------ALDDAADESANP 327 Q L++ FL QFYGD +D + E A P Sbjct 303 TTQPEGDAPETDPALPFLMQDFLVQFYGDAVERAETEAKEDAAVIERRGVDKHSFEEAAP 362 Query 328 ------VPREVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVHRNAEDAL 381 VPRE+LV P+ AE+ L LRG+ V RVP+RGDKRAL ETV RNA++ L Sbjct 363 VTRASVVPREILVQVAPNEAEQTLKVLEELRGAGVDARVPQRGDKRALMETVERNAKELL 422 Query 382 QQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGSLVVFEDGLPR 441 +QHKLKR D ARSAALQ +Q++L + APLRIEC D+SH+QGTDVV SLVVFEDGLPR Sbjct 423 KQHKLKRVGDLTARSAALQELQEALDMEQAPLRIECTDISHIQGTDVVASLVVFEDGLPR 482 Query 442 KSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQ--------------SDPDLLS 487 KSDYR + ++EAAG G S+DVA IAE+TRRRFLRH +D+ SD + Sbjct 483 KSDYRRYRVKEAAGDGHSNDVASIAEITRRRFLRHNQDKLAVPESEEFDGSTFSDEKVEE 542 Query 488 PERKSRRFAYPPNLYVVDGGAPQVNAASAVIDELGVTDVAVIGLAKRLEEVWVPSEPDPI 547 +RRFAYPP +++VDGGAPQV AA V DELG+ DV +IGLAKRLEE+W+P +PDP+ Sbjct 543 MSTDARRFAYPPQIFIVDGGAPQVAAAQEVFDELGIVDVVLIGLAKRLEEIWLPGDPDPV 602 Query 548 IMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVTHFGS 607 I+PRNS+ L+LLQ++RDEAHRFAITYHR +RS RM S LDS+ GLG+ RR LV HFGS Sbjct 603 ILPRNSQALFLLQQIRDEAHRFAITYHRQQRSKRMRVSELDSIKGLGQSRRTELVKHFGS 662 Query 608 IARLKEATVDEITAVPGIGVATATAVHDAL 637 +A+LKEA+V++I+ V G G A AV++ L Sbjct 663 VAKLKEASVEDISQVKGFGPKLAEAVYEGL 692 Lambda K H 0.320 0.136 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1498174480000 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40