BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1422 Length=342 Score E Sequences producing significant alignments: (Bits) Value gi|15608560|ref|NP_215938.1| hypothetical protein Rv1422 [Mycoba... 665 0.0 gi|31792616|ref|NP_855109.1| hypothetical protein Mb1457 [Mycoba... 664 0.0 gi|306807322|ref|ZP_07443990.1| hypothetical protein TMGG_01994 ... 662 0.0 gi|118617431|ref|YP_905763.1| hypothetical protein MUL_1816 [Myc... 604 5e-171 gi|183982242|ref|YP_001850533.1| hypothetical protein MMAR_2229 ... 603 1e-170 gi|240171792|ref|ZP_04750451.1| hypothetical protein MkanA1_2093... 592 4e-167 gi|15827215|ref|NP_301478.1| hypothetical protein ML0564 [Mycoba... 580 1e-163 gi|254822011|ref|ZP_05227012.1| hypothetical protein MintA_18907... 580 1e-163 gi|41407246|ref|NP_960082.1| hypothetical protein MAP1148 [Mycob... 578 5e-163 gi|254775801|ref|ZP_05217317.1| hypothetical protein MaviaA2_141... 572 4e-161 gi|336461606|gb|EGO40471.1| conserved hypothetical protein, cofD... 570 2e-160 gi|118465391|ref|YP_882540.1| hypothetical protein MAV_3358 [Myc... 568 3e-160 gi|342858718|ref|ZP_08715373.1| hypothetical protein MCOL_07571 ... 568 4e-160 gi|296170710|ref|ZP_06852285.1| protein of hypothetical function... 559 3e-157 gi|108799364|ref|YP_639561.1| hypothetical protein Mmcs_2397 [My... 555 4e-156 gi|333990920|ref|YP_004523534.1| hypothetical protein JDM601_228... 543 1e-152 gi|118470668|ref|YP_887396.1| hypothetical protein MSMEG_3080 [M... 539 2e-151 gi|120403683|ref|YP_953512.1| hypothetical protein Mvan_2699 [My... 528 6e-148 gi|145224295|ref|YP_001134973.1| hypothetical protein Mflv_3713 ... 523 2e-146 gi|169629866|ref|YP_001703515.1| hypothetical protein MAB_2782c ... 471 8e-131 gi|296393042|ref|YP_003657926.1| hypothetical protein Srot_0613 ... 409 2e-112 gi|54025562|ref|YP_119804.1| hypothetical protein nfa35920 [Noca... 403 2e-110 gi|333919554|ref|YP_004493135.1| hypothetical protein AS9A_1886 ... 402 4e-110 gi|111024125|ref|YP_707097.1| hypothetical protein RHA1_ro07175 ... 397 1e-108 gi|226366365|ref|YP_002784148.1| hypothetical protein ROP_69560 ... 395 6e-108 gi|343924578|ref|ZP_08764126.1| hypothetical protein GOALK_017_0... 391 8e-107 gi|226306514|ref|YP_002766474.1| hypothetical protein RER_30270 ... 387 1e-105 gi|229493606|ref|ZP_04387391.1| conserved hypothetical protein [... 385 4e-105 gi|312139600|ref|YP_004006936.1| hypothetical protein REQ_21990 ... 380 2e-103 gi|325676725|ref|ZP_08156399.1| protein of hypothetical function... 380 2e-103 gi|296140242|ref|YP_003647485.1| hypothetical protein Tpau_2543 ... 378 8e-103 gi|213965611|ref|ZP_03393805.1| conserved hypothetical protein [... 368 9e-100 gi|262202288|ref|YP_003273496.1| hypothetical protein Gbro_2361 ... 367 2e-99 gi|296117954|ref|ZP_06836537.1| hypothetical protein HMPREF0281_... 352 6e-95 gi|334563142|ref|ZP_08516133.1| hypothetical protein CbovD2_0108... 348 8e-94 gi|255325033|ref|ZP_05366139.1| conserved hypothetical protein [... 345 7e-93 gi|227833022|ref|YP_002834729.1| hypothetical protein cauri_1198... 345 8e-93 gi|262182490|ref|ZP_06041911.1| hypothetical protein CaurA7_0071... 345 8e-93 gi|68536080|ref|YP_250785.1| hypothetical protein jk1003 [Coryne... 342 4e-92 gi|19552802|ref|NP_600804.1| hypothetical protein NCgl1528 [Cory... 342 5e-92 gi|237785562|ref|YP_002906267.1| hypothetical protein ckrop_0971... 340 1e-91 gi|306836165|ref|ZP_07469150.1| protein of hypothetical function... 340 2e-91 gi|227503575|ref|ZP_03933624.1| protein of hypothetical function... 340 2e-91 gi|344044963|gb|EGV40637.1| hypothetical protein CgS9114_06555 [... 339 3e-91 gi|145295711|ref|YP_001138532.1| hypothetical protein cgR_1638 [... 339 4e-91 gi|326382179|ref|ZP_08203871.1| hypothetical protein SCNU_04506 ... 337 2e-90 gi|25028265|ref|NP_738319.1| hypothetical protein CE1709 [Coryne... 336 3e-90 gi|227549220|ref|ZP_03979269.1| protein of hypothetical function... 335 7e-90 gi|300784686|ref|YP_003764977.1| hypothetical protein AMED_2780 ... 334 1e-89 gi|225021372|ref|ZP_03710564.1| hypothetical protein CORMATOL_01... 333 3e-89 >gi|15608560|ref|NP_215938.1| hypothetical protein Rv1422 [Mycobacterium tuberculosis H37Rv] gi|15840879|ref|NP_335916.1| hypothetical protein MT1465 [Mycobacterium tuberculosis CDC1551] gi|121637352|ref|YP_977575.1| hypothetical protein BCG_1483 [Mycobacterium bovis BCG str. Pasteur 1173P2] 75 more sequence titles Length=342 Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/342 (100%), Positives = 342/342 (100%), Gaps = 0/342 (0%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL Sbjct 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA Sbjct 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE Sbjct 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP Sbjct 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR 342 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR Sbjct 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR 342 >gi|31792616|ref|NP_855109.1| hypothetical protein Mb1457 [Mycobacterium bovis AF2122/97] gi|31618205|emb|CAD94318.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] Length=342 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/342 (99%), Positives = 341/342 (99%), Gaps = 0/342 (0%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL Sbjct 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATILQHRFGGSG LAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 61 AALASDSPHGRLWATILQHRFGGSGVLAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA Sbjct 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE Sbjct 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP Sbjct 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR 342 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR Sbjct 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR 342 >gi|306807322|ref|ZP_07443990.1| hypothetical protein TMGG_01994 [Mycobacterium tuberculosis SUMu007] gi|308346245|gb|EFP35096.1| hypothetical protein TMGG_01994 [Mycobacterium tuberculosis SUMu007] Length=342 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/342 (99%), Positives = 341/342 (99%), Gaps = 0/342 (0%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL Sbjct 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATILQHRFG SGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 61 AALASDSPHGRLWATILQHRFGDSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA Sbjct 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE Sbjct 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP Sbjct 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR 342 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR Sbjct 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR 342 >gi|118617431|ref|YP_905763.1| hypothetical protein MUL_1816 [Mycobacterium ulcerans Agy99] gi|118569541|gb|ABL04292.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=358 Score = 604 bits (1558), Expect = 5e-171, Method: Compositional matrix adjust. Identities = 310/353 (88%), Positives = 327/353 (93%), Gaps = 12/353 (3%) Query 2 TDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALA 61 + IVALGGGHGLYATLSAARRLTPYVTA+VTVADDGGSSGRLRSELDV+PPGDLRMALA Sbjct 6 SHSIVALGGGHGLYATLSAARRLTPYVTAIVTVADDGGSSGRLRSELDVIPPGDLRMALA 65 Query 62 ALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVK 121 ALASDSP+GRLWATILQHRFGGSGALAGHPIGNL+LAGLSEVLADPVAALDELGRILGVK Sbjct 66 ALASDSPYGRLWATILQHRFGGSGALAGHPIGNLLLAGLSEVLADPVAALDELGRILGVK 125 Query 122 GRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAV 181 GRVLPMCP+ALQIEADVSGLE+DPRMFRLIRGQVA+ATTPGKVRRVRL P DPPATRQAV Sbjct 126 GRVLPMCPIALQIEADVSGLESDPRMFRLIRGQVAVATTPGKVRRVRLRPADPPATRQAV 185 Query 182 DAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVER 241 DAIMAADL+VLGPGSWFTSVIPHVLVPGL AAL+ATSARRALVLNLVAEPGETAGFSVER Sbjct 186 DAIMAADLIVLGPGSWFTSVIPHVLVPGLFAALQATSARRALVLNLVAEPGETAGFSVER 245 Query 242 HLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPG 301 HLHVLAQHAPGFTVHDIIIDA+RVPS+RE+EQLRRTATMLQAEVHFADVARPGTPLHDPG Sbjct 246 HLHVLAQHAPGFTVHDIIIDADRVPSDREKEQLRRTATMLQAEVHFADVARPGTPLHDPG 305 Query 302 KLAAVLDGVCARDVGASEPPVAATQEIPIDGGR------------PRGDDAWR 342 KLAAVLD V RD + PPV + QEIPI+GGR P+GDDAWR Sbjct 306 KLAAVLDAVRVRDRDLTTPPVTSPQEIPIEGGRQQTGGPGAGGNKPKGDDAWR 358 >gi|183982242|ref|YP_001850533.1| hypothetical protein MMAR_2229 [Mycobacterium marinum M] gi|183175568|gb|ACC40678.1| conserved membrane protein [Mycobacterium marinum M] Length=358 Score = 603 bits (1555), Expect = 1e-170, Method: Compositional matrix adjust. Identities = 310/353 (88%), Positives = 327/353 (93%), Gaps = 12/353 (3%) Query 2 TDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALA 61 + IVALGGGHGLYATLSAARRLTP+VTA+VTVADDGGSSGRLRSELDV+PPGDLRMALA Sbjct 6 SHSIVALGGGHGLYATLSAARRLTPHVTAIVTVADDGGSSGRLRSELDVIPPGDLRMALA 65 Query 62 ALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVK 121 ALASDSP+GRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVK Sbjct 66 ALASDSPYGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVK 125 Query 122 GRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAV 181 GRVLPMCP+ALQIEADVSGLE+DPRMFRLIRGQVA+ATTPGKVRRVRL P DPPATRQAV Sbjct 126 GRVLPMCPIALQIEADVSGLESDPRMFRLIRGQVAVATTPGKVRRVRLRPADPPATRQAV 185 Query 182 DAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVER 241 DAIMAADL+VLGPGSWFTSVIPHVLVPGL AAL+ATSARRALVLNLVAEPGETAGFSVER Sbjct 186 DAIMAADLIVLGPGSWFTSVIPHVLVPGLFAALQATSARRALVLNLVAEPGETAGFSVER 245 Query 242 HLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPG 301 HLHVLAQHAPGFTVHDIIIDA+RVPS+RE+EQLRRTATMLQAEVHFADVARPGTPLHDPG Sbjct 246 HLHVLAQHAPGFTVHDIIIDADRVPSDREKEQLRRTATMLQAEVHFADVARPGTPLHDPG 305 Query 302 KLAAVLDGVCARDVGASEPPVAATQEIPIDGG------------RPRGDDAWR 342 KLAAVLD V RD + PPV + QEIPI+GG RP+GDDAWR Sbjct 306 KLAAVLDAVRVRDRDLTTPPVTSPQEIPIEGGRQQSGGPGAGGNRPKGDDAWR 358 >gi|240171792|ref|ZP_04750451.1| hypothetical protein MkanA1_20930 [Mycobacterium kansasii ATCC 12478] Length=356 Score = 592 bits (1525), Expect = 4e-167, Method: Compositional matrix adjust. Identities = 305/333 (92%), Positives = 318/333 (96%), Gaps = 1/333 (0%) Query 2 TDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALA 61 + IVALGGGHGLYATLSAARRLTPYVTA+VTVADDGGSSGRLRSELDVVPPGDLRMALA Sbjct 10 SHSIVALGGGHGLYATLSAARRLTPYVTAIVTVADDGGSSGRLRSELDVVPPGDLRMALA 69 Query 62 ALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVK 121 ALASDSPHGRLWATILQHRFGG GALAGHPIGNL+LAGLSEVLADPVAALDELGR+LGVK Sbjct 70 ALASDSPHGRLWATILQHRFGGDGALAGHPIGNLILAGLSEVLADPVAALDELGRVLGVK 129 Query 122 GRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAV 181 GRVLPMCP+ALQIEADVSGLE+DPRMFRLIRGQVAIATTPGKVRRVRLLP DPPATRQAV Sbjct 130 GRVLPMCPIALQIEADVSGLESDPRMFRLIRGQVAIATTPGKVRRVRLLPPDPPATRQAV 189 Query 182 DAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVER 241 DAIMAADLVVLGPGSWFTSVIPHVLVPGL AL+ T+A+RALVLNLVAEPGETAGFSVER Sbjct 190 DAIMAADLVVLGPGSWFTSVIPHVLVPGLLTALQTTTAQRALVLNLVAEPGETAGFSVER 249 Query 242 HLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPG 301 HLHVLAQHAPGFTVHDIIIDAERVPSERER+QLRRTAT+LQAEVHFADVARPGTPLHDPG Sbjct 250 HLHVLAQHAPGFTVHDIIIDAERVPSERERDQLRRTATLLQAEVHFADVARPGTPLHDPG 309 Query 302 KLAAVLDGVCARDVGASEPPVAATQEIPIDGGR 334 KLAAVLD V ARD G + PV TQEIPI+GGR Sbjct 310 KLAAVLDAVRARDRGPAATPV-TTQEIPIEGGR 341 >gi|15827215|ref|NP_301478.1| hypothetical protein ML0564 [Mycobacterium leprae TN] gi|221229693|ref|YP_002503109.1| hypothetical protein MLBr_00564 [Mycobacterium leprae Br4923] gi|20140768|sp|Q9CCN9.1|Y564_MYCLE RecName: Full=UPF0052 protein ML0564 gi|13092763|emb|CAC30072.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932800|emb|CAR70657.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=359 Score = 580 bits (1494), Expect = 1e-163, Method: Compositional matrix adjust. Identities = 300/350 (86%), Positives = 316/350 (91%), Gaps = 12/350 (3%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 IVALGGGHGLY TLSAARRLTPYVTA+VTVADDGGSSGRLRSEL VVPPGDLRMALAALA Sbjct 10 IVALGGGHGLYVTLSAARRLTPYVTAIVTVADDGGSSGRLRSELGVVPPGDLRMALAALA 69 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 SDSP+GRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDE+GRILGVKGRV Sbjct 70 SDSPYGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDEVGRILGVKGRV 129 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPMCP+ALQIEADVSGLEADPR+FRLIRGQVAIA+TPGKVRRVRLLP DPPATRQAVDAI Sbjct 130 LPMCPIALQIEADVSGLEADPRIFRLIRGQVAIASTPGKVRRVRLLPVDPPATRQAVDAI 189 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 MAA+LVVLGPGSWFTSVIPHVLVPGL ALRAT+ARRALVLNL A PGETAGFSVERHLH Sbjct 190 MAANLVVLGPGSWFTSVIPHVLVPGLVTALRATTARRALVLNLAAGPGETAGFSVERHLH 249 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKLA 304 VLAQHAPGFTVHDIIIDA+RVP+ REREQLRR AT+LQAEVHF DVARPGT LHDPGKLA Sbjct 250 VLAQHAPGFTVHDIIIDADRVPNNREREQLRRAATLLQAEVHFVDVARPGTSLHDPGKLA 309 Query 305 AVLDGVCARDVGASEPPVAATQEIPIDGGR------------PRGDDAWR 342 LDGV + +S P VAAT++I +DG R PRGDDAWR Sbjct 310 TALDGVRVGNQDSSAPTVAATEQIRLDGKRPQTGVNGPVGKGPRGDDAWR 359 >gi|254822011|ref|ZP_05227012.1| hypothetical protein MintA_18907 [Mycobacterium intracellulare ATCC 13950] Length=358 Score = 580 bits (1494), Expect = 1e-163, Method: Compositional matrix adjust. Identities = 309/354 (88%), Positives = 318/354 (90%), Gaps = 12/354 (3%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 GIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLR EL VVPPGDLRMAL Sbjct 5 FNRGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRGELGVVPPGDLRMAL 64 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 65 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 124 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCP+ALQIEADVSGLE DPRMFR+IRGQVAIATTPGKVRRVRLLP PPATRQA Sbjct 125 KGRVLPMCPIALQIEADVSGLEGDPRMFRVIRGQVAIATTPGKVRRVRLLPDHPPATRQA 184 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIMAADLVVLGPGSWFTSVIPHVLVP LAAALRATSARRALVLNLVAEPGETAGFSVE Sbjct 185 VDAIMAADLVVLGPGSWFTSVIPHVLVPELAAALRATSARRALVLNLVAEPGETAGFSVE 244 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVLAQHAPGFTVHDIIIDA+RVPSEREREQLRRTAT+L AEVHFADV+RPGTPLHDP Sbjct 245 RHLHVLAQHAPGFTVHDIIIDADRVPSEREREQLRRTATLLHAEVHFADVSRPGTPLHDP 304 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGR------------PRGDDAWR 342 GKLAA LDGV A G P AT +I +DG + PRGDD+WR Sbjct 305 GKLAAALDGVRAARKGPEAAPATATADIRVDGAKPPPGGDGPAGSGPRGDDSWR 358 >gi|41407246|ref|NP_960082.1| hypothetical protein MAP1148 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395597|gb|AAS03465.1| hypothetical protein MAP_1148 [Mycobacterium avium subsp. paratuberculosis K-10] Length=358 Score = 578 bits (1490), Expect = 5e-163, Method: Compositional matrix adjust. Identities = 311/354 (88%), Positives = 320/354 (91%), Gaps = 12/354 (3%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 + GIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSEL VVPPGDLRMAL Sbjct 5 INRGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELGVVPPGDLRMAL 64 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 65 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 124 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCP+ALQIEADVSGLEADPRMFR+IRGQVAIATTPGKVRRVRLLP +PPATRQA Sbjct 125 KGRVLPMCPIALQIEADVSGLEADPRMFRVIRGQVAIATTPGKVRRVRLLPDNPPATRQA 184 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIMAADLVVLGPGSWFTSVIPHV+VPGLAAAL AT+ARRALVLNLVAEPGETAGFSVE Sbjct 185 VDAIMAADLVVLGPGSWFTSVIPHVMVPGLAAALWATTARRALVLNLVAEPGETAGFSVE 244 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVL QHAPGFTVHDIIIDAERVPSEREREQLRRTAT+L AEVHFADVARPGTPLHDP Sbjct 245 RHLHVLVQHAPGFTVHDIIIDAERVPSEREREQLRRTATLLSAEVHFADVARPGTPLHDP 304 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGR------------PRGDDAWR 342 GKLAA LDGV A PV AT +I +DG PRGDDAWR Sbjct 305 GKLAAALDGVRAARKAPGASPVTATADIRVDGASPPAGGNGPAGSGPRGDDAWR 358 >gi|254775801|ref|ZP_05217317.1| hypothetical protein MaviaA2_14185 [Mycobacterium avium subsp. avium ATCC 25291] Length=358 Score = 572 bits (1473), Expect = 4e-161, Method: Compositional matrix adjust. Identities = 313/354 (89%), Positives = 322/354 (91%), Gaps = 12/354 (3%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 + GIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSEL VVPPGDLRMAL Sbjct 5 INRGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELGVVPPGDLRMAL 64 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 65 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 124 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCP+ALQIEADVSGLEADPRMFR+IRGQVAIATTPGKVRRVRLLP +PPATRQA Sbjct 125 KGRVLPMCPIALQIEADVSGLEADPRMFRVIRGQVAIATTPGKVRRVRLLPDNPPATRQA 184 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIMAADLVVLGPGSWFTSVIPHV+VPGLAAALRAT+ARRALVLNLVAEPGETAGFSVE Sbjct 185 VDAIMAADLVVLGPGSWFTSVIPHVMVPGLAAALRATTARRALVLNLVAEPGETAGFSVE 244 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTAT+L AEVHFADVARPGTPLHDP Sbjct 245 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATLLSAEVHFADVARPGTPLHDP 304 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGR------------PRGDDAWR 342 GKLAA LDGV A PV AT +I +DG PRGDDAWR Sbjct 305 GKLAAALDGVRAARKAPGASPVTATADIRVDGASPPAGGNGPAGSGPRGDDAWR 358 >gi|336461606|gb|EGO40471.1| conserved hypothetical protein, cofD-related protein [Mycobacterium avium subsp. paratuberculosis S397] Length=358 Score = 570 bits (1468), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 312/354 (89%), Positives = 321/354 (91%), Gaps = 12/354 (3%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 + GIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSEL VVPPGDLRMAL Sbjct 5 INRGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELGVVPPGDLRMAL 64 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 65 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 124 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCP+ALQIEADVSGLEADPRMFR+IRGQVAIATTPGKVRRVRLLP +PPATRQA Sbjct 125 KGRVLPMCPIALQIEADVSGLEADPRMFRVIRGQVAIATTPGKVRRVRLLPDNPPATRQA 184 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIMAADLVVLGPGSWFTSVIPHV+VPGLAAALRAT+ARRALVLNLVAEPGETAGFSVE Sbjct 185 VDAIMAADLVVLGPGSWFTSVIPHVMVPGLAAALRATTARRALVLNLVAEPGETAGFSVE 244 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVL QHAPGFTVHDIIIDAERVPSEREREQLRRTAT+L AEVHFADVARPGTPLHDP Sbjct 245 RHLHVLVQHAPGFTVHDIIIDAERVPSEREREQLRRTATLLSAEVHFADVARPGTPLHDP 304 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGR------------PRGDDAWR 342 GKLAA LDGV A PV AT +I +DG PRGDDAWR Sbjct 305 GKLAAALDGVRAARKAPGASPVTATADIRVDGASPPAGGNGPAGSGPRGDDAWR 358 >gi|118465391|ref|YP_882540.1| hypothetical protein MAV_3358 [Mycobacterium avium 104] gi|118166678|gb|ABK67575.1| conserved hypothetical protein [Mycobacterium avium 104] Length=358 Score = 568 bits (1465), Expect = 3e-160, Method: Compositional matrix adjust. Identities = 312/354 (89%), Positives = 321/354 (91%), Gaps = 12/354 (3%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 + GIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSEL VVPPGDLRMAL Sbjct 5 INRGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELGVVPPGDLRMAL 64 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 65 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 124 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCP+ALQIEADVSGLEADPRMFR+IRGQVAIATTPGKVRRVRLLP +PPATRQA Sbjct 125 KGRVLPMCPIALQIEADVSGLEADPRMFRVIRGQVAIATTPGKVRRVRLLPDNPPATRQA 184 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIMAADLVVLGPGSWFTSVIPHV+VPGLAAALRAT+ARRALVLNLVAEPGETAGFSVE Sbjct 185 VDAIMAADLVVLGPGSWFTSVIPHVMVPGLAAALRATTARRALVLNLVAEPGETAGFSVE 244 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVLAQHAPGFTVHDIIIDA RVPSEREREQLRRTAT+L AEVHFADVARPGTPLHDP Sbjct 245 RHLHVLAQHAPGFTVHDIIIDAGRVPSEREREQLRRTATLLSAEVHFADVARPGTPLHDP 304 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGR------------PRGDDAWR 342 GKLAA LDGV A PV AT +I +DG PRGDDAWR Sbjct 305 GKLAAALDGVRAARKAPGASPVTATADIRVDGASPPAGGNGPAGSGPRGDDAWR 358 >gi|342858718|ref|ZP_08715373.1| hypothetical protein MCOL_07571 [Mycobacterium colombiense CECT 3035] gi|342134422|gb|EGT87602.1| hypothetical protein MCOL_07571 [Mycobacterium colombiense CECT 3035] Length=358 Score = 568 bits (1465), Expect = 4e-160, Method: Compositional matrix adjust. Identities = 311/354 (88%), Positives = 322/354 (91%), Gaps = 12/354 (3%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 M GIVALGGGHGLYATLSAARRLTP+VTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL Sbjct 5 MNRGIVALGGGHGLYATLSAARRLTPHVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 64 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 65 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 124 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCP+ALQIEADVSGLE+DPRMFRLIRGQVAIA+TPGKVRRVRLLP +PPATRQA Sbjct 125 KGRVLPMCPIALQIEADVSGLESDPRMFRLIRGQVAIASTPGKVRRVRLLPDNPPATRQA 184 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIM+ADLVVLGPGSWFTSVIPHVLVPGLAAALRAT+ARRALVLNLVAEPGETAGFSVE Sbjct 185 VDAIMSADLVVLGPGSWFTSVIPHVLVPGLAAALRATTARRALVLNLVAEPGETAGFSVE 244 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVLAQHAP F+VHDIIIDAERVPSEREREQLRRTAT+L AEVHFADVARPGTPLHDP Sbjct 245 RHLHVLAQHAPEFSVHDIIIDAERVPSEREREQLRRTATLLSAEVHFADVARPGTPLHDP 304 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRP------------RGDDAWR 342 GKLAA LDGV A P V AT +I +DG P RGDDAWR Sbjct 305 GKLAAALDGVRAAHKAPGPPSVTATADIRVDGASPPVGGSGPAGSGPRGDDAWR 358 >gi|296170710|ref|ZP_06852285.1| protein of hypothetical function UPF0052 and CofD [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894699|gb|EFG74433.1| protein of hypothetical function UPF0052 and CofD [Mycobacterium parascrofulaceum ATCC BAA-614] Length=358 Score = 559 bits (1440), Expect = 3e-157, Method: Compositional matrix adjust. Identities = 308/352 (88%), Positives = 319/352 (91%), Gaps = 16/352 (4%) Query 3 DGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAA 62 + IVALGGGHGLYATLSAARRLTP+VTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAA Sbjct 11 NSIVALGGGHGLYATLSAARRLTPHVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAA 70 Query 63 LASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKG 122 LASDSPHGRLWATILQHRFGG+GALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKG Sbjct 71 LASDSPHGRLWATILQHRFGGTGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKG 130 Query 123 RVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVD 182 RVLPMCP+ALQIEADVSGLE DPR+F LIRGQVAIATTPGKVRRVRLLP+DPPATRQAVD Sbjct 131 RVLPMCPIALQIEADVSGLETDPRIFHLIRGQVAIATTPGKVRRVRLLPSDPPATRQAVD 190 Query 183 AIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERH 242 AIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRAT+ARRALVLNLVAEPGETAGFSVERH Sbjct 191 AIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATTARRALVLNLVAEPGETAGFSVERH 250 Query 243 LHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGK 302 LHVLAQHAPGFTVHDIIIDAERVP ERERE LRRTAT+L AEVHFADVARPGTPLHDPGK Sbjct 251 LHVLAQHAPGFTVHDIIIDAERVPGEREREHLRRTATLLSAEVHFADVARPGTPLHDPGK 310 Query 303 LAAVLDGVCARDVGASEPPVAATQEIPIDGGR------------PRGDDAWR 342 LAA LDGV A A + P AT +I +DG PR DDAWR Sbjct 311 LAAALDGVRA----AHKGPATATADIRVDGASPQNGGNGPAGSGPRSDDAWR 358 >gi|108799364|ref|YP_639561.1| hypothetical protein Mmcs_2397 [Mycobacterium sp. MCS] gi|119868480|ref|YP_938432.1| hypothetical protein Mkms_2444 [Mycobacterium sp. KMS] gi|126435022|ref|YP_001070713.1| hypothetical protein Mjls_2438 [Mycobacterium sp. JLS] gi|108769783|gb|ABG08505.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119694569|gb|ABL91642.1| protein of unknown function UPF0052 and CofD [Mycobacterium sp. KMS] gi|126234822|gb|ABN98222.1| protein of unknown function UPF0052 and CofD [Mycobacterium sp. JLS] Length=340 Score = 555 bits (1430), Expect = 4e-156, Method: Compositional matrix adjust. Identities = 290/344 (85%), Positives = 309/344 (90%), Gaps = 6/344 (1%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 M+ IVALGGGHGLYATLSAARRL+P+VTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL Sbjct 1 MSPRIVALGGGHGLYATLSAARRLSPHVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATI+QHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV Sbjct 61 AALASDSPHGRLWATIIQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCP+ALQIEADV+GLE+DPRM R+IRGQVAIATT GKVRRVRLLP DPPATRQA Sbjct 121 KGRVLPMCPIALQIEADVAGLESDPRMSRVIRGQVAIATTVGKVRRVRLLPGDPPATRQA 180 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIM+ADLVVLGPGSWFTSVIPHVLVP LAAALRATSARRALVLNL AEPGETAGFSVE Sbjct 181 VDAIMSADLVVLGPGSWFTSVIPHVLVPELAAALRATSARRALVLNLAAEPGETAGFSVE 240 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RH+HVL+QHAP FTVHDII+DA RVPS+RER+QL RTA +L A V FADV RPGTPLHDP Sbjct 241 RHIHVLSQHAPNFTVHDIIVDASRVPSDRERDQLSRTAKILDARVEFADVCRPGTPLHDP 300 Query 301 GKLAAVLDGVCARDV--GASEPPVAATQEIPIDGGRPRGDDAWR 342 +LAA L+GV R G E P A+T RPRGDD+WR Sbjct 301 ARLAAALEGVRLRGTAGGRDEVPTASTPT----SNRPRGDDSWR 340 >gi|333990920|ref|YP_004523534.1| hypothetical protein JDM601_2280 [Mycobacterium sp. JDM601] gi|333486888|gb|AEF36280.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=359 Score = 543 bits (1400), Expect = 1e-152, Method: Compositional matrix adjust. Identities = 283/328 (87%), Positives = 301/328 (92%), Gaps = 2/328 (0%) Query 4 GIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 GIVALGGGHGLYATLSAARRLTP+VTAVVTVADDGGSSGRLR ELDVVPPGDLRMALAAL Sbjct 11 GIVALGGGHGLYATLSAARRLTPHVTAVVTVADDGGSSGRLRGELDVVPPGDLRMALAAL 70 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 ASDSP GRLWATILQHRFGG+GALAGHPIGNL+LAGL+EVLADPVAALDELGR+LGVKGR Sbjct 71 ASDSPTGRLWATILQHRFGGTGALAGHPIGNLLLAGLNEVLADPVAALDELGRMLGVKGR 130 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 VLPMCP+ALQIEADVSGL+ADPR+F +IRGQVAIATTPGKVRRVRLLP +PPATRQAVDA Sbjct 131 VLPMCPIALQIEADVSGLDADPRLFGVIRGQVAIATTPGKVRRVRLLPGNPPATRQAVDA 190 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 IMAADLVVLGPGSWFTSVIPH+LVPGLA+AL+ T ARRALVLNLVAEPGETAGFSVERHL Sbjct 191 IMAADLVVLGPGSWFTSVIPHLLVPGLASALQGTKARRALVLNLVAEPGETAGFSVERHL 250 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKL 303 HVLAQHAPGFTV IIIDA RVPSEREREQLRR AT+ +AEV F DVARPGTPLHDPGKL Sbjct 251 HVLAQHAPGFTVDHIIIDAGRVPSEREREQLRRAATLFEAEVRFVDVARPGTPLHDPGKL 310 Query 304 AAVLDGVCARDVGASEPPVAATQEIPID 331 AA LD V R GAS P + P++ Sbjct 311 AAALDEV--RAAGASSPRIPTPATAPVE 336 >gi|118470668|ref|YP_887396.1| hypothetical protein MSMEG_3080 [Mycobacterium smegmatis str. MC2 155] gi|118171955|gb|ABK72851.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=354 Score = 539 bits (1389), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 287/358 (81%), Positives = 310/358 (87%), Gaps = 20/358 (5%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 MT IVALGGGHGLYATLSAARRLTP+VTAVVTVADDGGSSGRLRSELD+VPPGDLRMAL Sbjct 1 MTPRIVALGGGHGLYATLSAARRLTPHVTAVVTVADDGGSSGRLRSELDIVPPGDLRMAL 60 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATI+QHRFGGSGALAGHPIGNL+LAGL+EVLADPVAALDELGRILGV Sbjct 61 AALASDSPHGRLWATIIQHRFGGSGALAGHPIGNLILAGLNEVLADPVAALDELGRILGV 120 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCP+ALQIEADVSGLE+DPRM R+IRGQVAIATT GKVRRVRLLP DPPATRQA Sbjct 121 KGRVLPMCPIALQIEADVSGLESDPRMSRVIRGQVAIATTVGKVRRVRLLPGDPPATRQA 180 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 V+AIM+ADLVVLGPGSWFTSVIPHVLVP LAAALR TSARRALVLNL AEPGETAGFS E Sbjct 181 VEAIMSADLVVLGPGSWFTSVIPHVLVPELAAALRETSARRALVLNLAAEPGETAGFSAE 240 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RHLHVL+QHAP F VHDII+DA RVPS+REREQL RTA +L+A V FADV+RPGTPLHDP Sbjct 241 RHLHVLSQHAPDFRVHDIIVDASRVPSDREREQLSRTANILEARVEFADVSRPGTPLHDP 300 Query 301 GKLAAVLDGVCARDVGASEPPVAATQE--IP------IDGG--------RPRGDDAWR 342 +LAAVL+GV R + P ++ QE +P +D R RGD WR Sbjct 301 ARLAAVLEGVRLR----ASAPGSSVQERTVPTPTARSVDAARRDQAPPDRSRGDAPWR 354 >gi|120403683|ref|YP_953512.1| hypothetical protein Mvan_2699 [Mycobacterium vanbaalenii PYR-1] gi|119956501|gb|ABM13506.1| protein of unknown function UPF0052 and CofD [Mycobacterium vanbaalenii PYR-1] Length=344 Score = 528 bits (1359), Expect = 6e-148, Method: Compositional matrix adjust. Identities = 286/345 (83%), Positives = 307/345 (89%), Gaps = 4/345 (1%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 M+ IVALGGGHGLYATLSAARRLTP+VTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL Sbjct 1 MSPRIVALGGGHGLYATLSAARRLTPHVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATI+QHRFGGSGALAGHPIGNL++AGL+EVLADPVAALDE+GRILGV Sbjct 61 AALASDSPHGRLWATIIQHRFGGSGALAGHPIGNLIIAGLNEVLADPVAALDEVGRILGV 120 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCPV L IEADV GLE+DPR+ R IRGQVAIATT GKVRRVRLLP DPPAT QA Sbjct 121 KGRVLPMCPVGLGIEADVVGLESDPRVSRAIRGQVAIATTVGKVRRVRLLPGDPPATHQA 180 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 VDAIM ADLVVLGPGSWFTSVIPHVLVP LAAAL+AT+ARRALVLNLVAEPGETAGFSVE Sbjct 181 VDAIMNADLVVLGPGSWFTSVIPHVLVPQLAAALKATTARRALVLNLVAEPGETAGFSVE 240 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RH+HVLAQHAPGFTVHDII+D+ RVPSEREREQLRRTAT+L A V FADV+RPGTPLHDP Sbjct 241 RHIHVLAQHAPGFTVHDIIVDSARVPSEREREQLRRTATILDANVEFADVSRPGTPLHDP 300 Query 301 GKLAAVLDGVCARDV---GASEPPVAATQEIPIDGGRPRGDDAWR 342 +LAA L+GV R + G ++ T P G PRGDD WR Sbjct 301 ARLAAALEGVRKRGISTNGMTQGVQQPTVPTPTANG-PRGDDPWR 344 >gi|145224295|ref|YP_001134973.1| hypothetical protein Mflv_3713 [Mycobacterium gilvum PYR-GCK] gi|315444628|ref|YP_004077507.1| hypothetical protein Mspyr1_30550 [Mycobacterium sp. Spyr1] gi|145216781|gb|ABP46185.1| protein of unknown function UPF0052 and CofD [Mycobacterium gilvum PYR-GCK] gi|315262931|gb|ADT99672.1| conserved hypothetical protein, cofD-related protein [Mycobacterium sp. Spyr1] Length=339 Score = 523 bits (1347), Expect = 2e-146, Method: Compositional matrix adjust. Identities = 281/342 (83%), Positives = 306/342 (90%), Gaps = 3/342 (0%) Query 1 MTDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMAL 60 M+ IVALGGGHGLYATLSAARRLTP+VTA+VTVADDGGSSGRLR+ELDVVPPGDLRMAL Sbjct 1 MSPRIVALGGGHGLYATLSAARRLTPHVTAIVTVADDGGSSGRLRNELDVVPPGDLRMAL 60 Query 61 AALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV 120 AALASDSPHGRLWATI+QHRFGGSGALAGHPIGNLMLAGL+EVLADPVAALDELGR+LGV Sbjct 61 AALASDSPHGRLWATIIQHRFGGSGALAGHPIGNLMLAGLNEVLADPVAALDELGRVLGV 120 Query 121 KGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQA 180 KGRVLPMCPV L IEADV GLE+DPR+ R IRGQVAIATT GKVRRVRLLP+DPPAT QA Sbjct 121 KGRVLPMCPVGLSIEADVVGLESDPRVSRAIRGQVAIATTVGKVRRVRLLPSDPPATPQA 180 Query 181 VDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVE 240 +DAIM ADLVVLGPGSWFTSVIPHVLVP LAAAL+AT+ARRALVLNLVAEPGETAGFSVE Sbjct 181 IDAIMNADLVVLGPGSWFTSVIPHVLVPQLAAALQATTARRALVLNLVAEPGETAGFSVE 240 Query 241 RHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDP 300 RH+HVLAQHAPGFTVHDII+D+ RV +R+REQLRRTAT++ A+V FADV+RPGTPLHDP Sbjct 241 RHIHVLAQHAPGFTVHDIIVDSARVTGDRDREQLRRTATIIGADVEFADVSRPGTPLHDP 300 Query 301 GKLAAVLDGVCARDVGASEPPVAATQEIPIDGGRPRGDDAWR 342 +LAA LDGV R G++ T P G PRGDD WR Sbjct 301 ARLAAALDGVRKR--GSTTAVAQPTVPTPTVNG-PRGDDPWR 339 >gi|169629866|ref|YP_001703515.1| hypothetical protein MAB_2782c [Mycobacterium abscessus ATCC 19977] gi|169241833|emb|CAM62861.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=364 Score = 471 bits (1212), Expect = 8e-131, Method: Compositional matrix adjust. Identities = 249/348 (72%), Positives = 283/348 (82%), Gaps = 11/348 (3%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 IVALGGGHGLYATLSAARRLT +TAVVTV+DDGGSSGR+RSEL +VPPGDLRMALAALA Sbjct 18 IVALGGGHGLYATLSAARRLTHDITAVVTVSDDGGSSGRIRSELGIVPPGDLRMALAALA 77 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 SDSP GR+WAT +QHR GGSG LAGHPIGNL+LAGL+++LADPV ALDE+GR+LG+ GRV Sbjct 78 SDSPRGRMWATAIQHRLGGSGGLAGHPIGNLILAGLTDMLADPVTALDEMGRMLGITGRV 137 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPMCP+ LQIEADVSGLE+DPRM R+IRGQVA+ATTPGKVRRVRL P +PPATRQA+DAI Sbjct 138 LPMCPIPLQIEADVSGLESDPRMSRVIRGQVALATTPGKVRRVRLHPGNPPATRQAIDAI 197 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 MAADLVVLGPGSWFTSVIPHVLVP L AAL+ T AR+AL+LNL EPGETAGFS ERHLH Sbjct 198 MAADLVVLGPGSWFTSVIPHVLVPELFAALQQTPARKALILNLAPEPGETAGFSAERHLH 257 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKLA 304 VL+QHAP F VHDI++++ S ER+ L R A + A+V FADV+RPGT LHDP KLA Sbjct 258 VLSQHAPEFGVHDIVVESASADST-ERDHLTRAAALFNAQVQFADVSRPGTHLHDPAKLA 316 Query 305 AVLD----GVCARDVG-ASEPPVAATQEIPIDGGR-----PRGDDAWR 342 AVLD G A G A+ +T + GGR RGD WR Sbjct 317 AVLDRVRTGGAALGTGTAAGTDAESTVRLAAGGGRTQHGSQRGDATWR 364 >gi|296393042|ref|YP_003657926.1| hypothetical protein Srot_0613 [Segniliparus rotundus DSM 44985] gi|296180189|gb|ADG97095.1| protein of unknown function UPF0052 and CofD [Segniliparus rotundus DSM 44985] Length=329 Score = 409 bits (1052), Expect = 2e-112, Method: Compositional matrix adjust. Identities = 218/315 (70%), Positives = 242/315 (77%), Gaps = 0/315 (0%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 + ALGGGHGL+ATLSA RRLTP VTAVVTVADDGGSSGRLR ELDV+PPGDLRMAL AL Sbjct 11 VAALGGGHGLFATLSAVRRLTPDVTAVVTVADDGGSSGRLRQELDVIPPGDLRMALVALT 70 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 D +WA +LQHRFGG GALAGHP+GNL+LAGL+EVL DPVAALD + R G +GRV Sbjct 71 PDDGDAGMWAQVLQHRFGGVGALAGHPVGNLLLAGLAEVLGDPVAALDAMVRTFGAQGRV 130 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM V L+IEA+VSG+E DPR+ R IRGQVA+ATTPGKVRRVRLLPT+PPA AV AI Sbjct 131 LPMSAVPLEIEAEVSGIEDDPRLIRRIRGQVAVATTPGKVRRVRLLPTEPPACAAAVGAI 190 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 M ADLVVLGPGSWF+SVIPHVLVP AL AT AR+ LVLNL EPGETAGFS ERHLH Sbjct 191 MRADLVVLGPGSWFSSVIPHVLVPEQLQALTATDARKVLVLNLAPEPGETAGFSTERHLH 250 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKLA 304 VL+QHAPG V I++DA VP +REQL R A A FA VA PGT HDP LA Sbjct 251 VLSQHAPGLRVDHIVVDAASVPDGADREQLVRAADRFGASPTFARVAIPGTHQHDPEALA 310 Query 305 AVLDGVCARDVGASE 319 VL + +DV E Sbjct 311 GVLKDLVGQDVPGQE 325 >gi|54025562|ref|YP_119804.1| hypothetical protein nfa35920 [Nocardia farcinica IFM 10152] gi|54017070|dbj|BAD58440.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=348 Score = 403 bits (1036), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 220/304 (73%), Positives = 251/304 (83%), Gaps = 2/304 (0%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 +VALGGGHGLYATLSA RRLT ++AVVTVADDGGSSGRLR+EL V+PPGDLRMALAALA Sbjct 10 VVALGGGHGLYATLSAVRRLTRRISAVVTVADDGGSSGRLRAELGVLPPGDLRMALAALA 69 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 +D P G +WA LQHRFGGSGALAGH +GNL+LAGL+EVL DPVAALDE+ +L GRV Sbjct 70 AD-PDG-VWARTLQHRFGGSGALAGHSVGNLILAGLTEVLGDPVAALDEVAGLLQSTGRV 127 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM P+AL IEADVSGLEADPR+ R IRGQVA+ATTPGKVRRVRL+P+DPPA+ +A AI Sbjct 128 LPMSPIALDIEADVSGLEADPRVSRCIRGQVAVATTPGKVRRVRLIPSDPPASPEATSAI 187 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 AD+VVLGPGSWFTSVIPHVLVP L AL T AR+ LVLNL A+PGETAGFS ERHLH Sbjct 188 EHADVVVLGPGSWFTSVIPHVLVPELREALVYTRARKILVLNLAAQPGETAGFSAERHLH 247 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKLA 304 VL+QHAP FTV ++++DA VP RERE + R A L+A V F++VA GT H PGKLA Sbjct 248 VLSQHAPEFTVDEVLVDAGSVPPGREREHVARAAEQLRARVTFSEVAEAGTDRHHPGKLA 307 Query 305 AVLD 308 A LD Sbjct 308 AALD 311 >gi|333919554|ref|YP_004493135.1| hypothetical protein AS9A_1886 [Amycolicicoccus subflavus DQS3-9A1] gi|333481775|gb|AEF40335.1| hypothetical protein AS9A_1886 [Amycolicicoccus subflavus DQS3-9A1] Length=348 Score = 402 bits (1033), Expect = 4e-110, Method: Compositional matrix adjust. Identities = 213/303 (71%), Positives = 243/303 (81%), Gaps = 0/303 (0%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 IVALGGGHGLYATLSAAR+LT +TAVVTVADDGGSSGRLRSELD+VPPGDLRMALAALA Sbjct 16 IVALGGGHGLYATLSAARQLTDDITAVVTVADDGGSSGRLRSELDLVPPGDLRMALAALA 75 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 H +LW ++QHRF G+GALAGH +GNL+LAGL++VL D ++ALDELGRILGV+GRV Sbjct 76 DHDSHAQLWRDVVQHRFRGTGALAGHAVGNLILAGLTDVLGDIISALDELGRILGVRGRV 135 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM + LQIEADV GLE DPR+ R+IRGQVA+ATTPG+VRRVRLLP++P A R+AV AI Sbjct 136 LPMATIPLQIEADVVGLEEDPRINRVIRGQVAVATTPGRVRRVRLLPSEPVACREAVAAI 195 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 ADLVVLGPGSWF+SVIPHVLVP AL + +RALVLNL + GETAGFS ERHLH Sbjct 196 TDADLVVLGPGSWFSSVIPHVLVPAQRDALIESRGKRALVLNLGPQAGETAGFSAERHLH 255 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKLA 304 VL+QHAP F V +I+DA VP ER L R A L AEV +ADV PGT HD KL Sbjct 256 VLSQHAPSFRVDQVIVDAGTVPPGSERAHLCRAAAQLGAEVRYADVGVPGTAKHDIFKLG 315 Query 305 AVL 307 AVL Sbjct 316 AVL 318 >gi|111024125|ref|YP_707097.1| hypothetical protein RHA1_ro07175 [Rhodococcus jostii RHA1] gi|110823655|gb|ABG98939.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=341 Score = 397 bits (1021), Expect = 1e-108, Method: Compositional matrix adjust. Identities = 221/324 (69%), Positives = 254/324 (79%), Gaps = 1/324 (0%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 IVALGGGHGL+ATLSAARRL+ VTAVVTVADDGGSSGRLR+EL V+PPGDLRMALAALA Sbjct 10 IVALGGGHGLFATLSAARRLSRDVTAVVTVADDGGSSGRLRAELGVIPPGDLRMALAALA 69 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 +D P + W +QHRFGG GALAGH +GNL+LAGL+EVL DPVAALDEL ++L + GRV Sbjct 70 ADDPEVQDWTDTIQHRFGGIGALAGHSVGNLILAGLTEVLGDPVAALDELAQLLRINGRV 129 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM P+AL IEADV GLEADPR+ R IRGQVA+ATTPGKVRRVRLLP +PPA AV AI Sbjct 130 LPMSPIALDIEADVQGLEADPRVSRCIRGQVAVATTPGKVRRVRLLPANPPACPDAVRAI 189 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 AD+VVLGPGSWF+SVIPHVLVP L L AT+AR+ LVLNL EPGETAGFS ERHLH Sbjct 190 EVADMVVLGPGSWFSSVIPHVLVPELLVTLIATAARKVLVLNLAPEPGETAGFSTERHLH 249 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKLA 304 VL+QHAP TV +++D+ VP RERE L R A QA V +ADV+ GT H GKLA Sbjct 250 VLSQHAPELTVDFVVVDSGSVPPGREREHLARAAGQFQARVVYADVSEHGTHTHHAGKLA 309 Query 305 AVLDGVCAR-DVGASEPPVAATQE 327 +VL+ + + D G+ VA T E Sbjct 310 SVLEQLWSDPDAGSRGSEVAETPE 333 >gi|226366365|ref|YP_002784148.1| hypothetical protein ROP_69560 [Rhodococcus opacus B4] gi|226244855|dbj|BAH55203.1| hypothetical protein [Rhodococcus opacus B4] Length=341 Score = 395 bits (1014), Expect = 6e-108, Method: Compositional matrix adjust. Identities = 222/327 (68%), Positives = 254/327 (78%), Gaps = 1/327 (0%) Query 2 TDGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALA 61 T IVALGGGHGL+ATLSAARRL+ VTAVVTVADDGGSSGRLR+EL V+PPGDLRMALA Sbjct 7 TPAIVALGGGHGLFATLSAARRLSRDVTAVVTVADDGGSSGRLRAELGVIPPGDLRMALA 66 Query 62 ALASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVK 121 ALA+D P + W +QHRFGG GALAGH +GNL+LAGL+EVL DPVAALDEL R+L + Sbjct 67 ALAADDPEVQDWTDTIQHRFGGIGALAGHSVGNLILAGLTEVLGDPVAALDELARLLRID 126 Query 122 GRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAV 181 GRVLPM P+AL IEADV GLEADPR+ R IRGQVA+ATTPGKVRRVRLLP +PPA AV Sbjct 127 GRVLPMSPIALDIEADVQGLEADPRVSRCIRGQVAVATTPGKVRRVRLLPANPPACPDAV 186 Query 182 DAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVER 241 AI AAD+VVLGPGSWF+SVIPHVLVP L L AT AR+ LVLNL EPGETAGFS ER Sbjct 187 RAIDAADMVVLGPGSWFSSVIPHVLVPELLDTLIATPARKVLVLNLAPEPGETAGFSTER 246 Query 242 HLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPG 301 HLHVL+QHAP TV +++D+ VP RERE L R A +A V +ADV+ GT H G Sbjct 247 HLHVLSQHAPELTVDFVVVDSGSVPPGREREHLARAAGQFRARVVYADVSEHGTHTHHAG 306 Query 302 KLAAVLDGVCAR-DVGASEPPVAATQE 327 KLA+VL+ + + D G+ A T E Sbjct 307 KLASVLEQLWSDPDAGSRGSEAAETPE 333 >gi|343924578|ref|ZP_08764126.1| hypothetical protein GOALK_017_00360 [Gordonia alkanivorans NBRC 16433] gi|343765513|dbj|GAA11052.1| hypothetical protein GOALK_017_00360 [Gordonia alkanivorans NBRC 16433] Length=344 Score = 391 bits (1005), Expect = 8e-107, Method: Compositional matrix adjust. Identities = 210/322 (66%), Positives = 245/322 (77%), Gaps = 15/322 (4%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 IVALGGGHGLYATL+A R L+ +TAVVTVADDGGSSGRLR+EL ++PPGDLRMALAAL Sbjct 10 IVALGGGHGLYATLTAMRYLSTDITAVVTVADDGGSSGRLRAELGLIPPGDLRMALAALM 69 Query 65 S-----------DSPHGR----LWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVA 109 S P R LWA +LQHRFGG GALAGHPIGNLMLAGL+EVL D VA Sbjct 70 SAPKALEDFQTAGDPDTRRRHELWAEVLQHRFGGRGALAGHPIGNLMLAGLTEVLGDAVA 129 Query 110 ALDELGRILGVKGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRL 169 AL EL + G+ G+VLPM V L IEADVSGLEADPR+ R IRGQVA+ATTPGKVRRVRL Sbjct 130 ALQELRSMFGIVGQVLPMSTVPLDIEADVSGLEADPRISREIRGQVAVATTPGKVRRVRL 189 Query 170 LPTDPPATRQAVDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVA 229 +P +PPA AV AI +ADLV+LGPGSWF+SVIPHVLVP AL+ T+AR+ LV+NL Sbjct 190 IPEEPPACESAVGAIESADLVMLGPGSWFSSVIPHVLVPEQLKALQRTAARKVLVVNLAP 249 Query 230 EPGETAGFSVERHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFAD 289 EPGET GFSVERHLHVL HA F V ++++DA VP+ RERE L R A + AE++ D Sbjct 250 EPGETPGFSVERHLHVLHAHADTFRVDNVLVDASSVPAGREREHLVRAAGLFGAELNVGD 309 Query 290 VARPGTPLHDPGKLAAVLDGVC 311 VA PG +HDP K+AAV++ +C Sbjct 310 VAVPGRQVHDPAKVAAVVNELC 331 >gi|226306514|ref|YP_002766474.1| hypothetical protein RER_30270 [Rhodococcus erythropolis PR4] gi|226185631|dbj|BAH33735.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=354 Score = 387 bits (995), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 214/306 (70%), Positives = 246/306 (81%), Gaps = 3/306 (0%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 IVALGGGHGL+ATL A RRLT VTAVVTVADDGGSSGRLR+EL V+PPGDLRMALAALA Sbjct 17 IVALGGGHGLFATLQAVRRLTVDVTAVVTVADDGGSSGRLRAELGVIPPGDLRMALAALA 76 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 SD P W +QHRFGG GALAGH +GNL+LAGL+EVL DPV ALDE+ R+L ++GRV Sbjct 77 SDEPEIVDWTRTIQHRFGGVGALAGHSVGNLILAGLTEVLGDPVVALDEMARLLRIRGRV 136 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM P+AL+IEADV GLE DPR+ R IRGQVA+ATTPGKVRRVRLLP++PPA +AV AI Sbjct 137 LPMSPIALEIEADVQGLEEDPRVSRCIRGQVAVATTPGKVRRVRLLPSNPPACPEAVTAI 196 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 ADLVVLGPGSWF+SVIPHVLVP L +L +T+AR+ LVLNL EPGETAGFS ERHLH Sbjct 197 DRADLVVLGPGSWFSSVIPHVLVPELVESLSSTNARKVLVLNLAPEPGETAGFSAERHLH 256 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVA--RPGTP-LHDPG 301 VL+QH P F V +++D+ VP+ RERE L+R A AEV +ADVA PG +HDP Sbjct 257 VLSQHVPDFRVDYVVVDSASVPAGREREHLQRAADQFSAEVRYADVADTSPGAAHVHDPA 316 Query 302 KLAAVL 307 KLA VL Sbjct 317 KLADVL 322 >gi|229493606|ref|ZP_04387391.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319567|gb|EEN85403.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=354 Score = 385 bits (990), Expect = 4e-105, Method: Compositional matrix adjust. Identities = 214/306 (70%), Positives = 244/306 (80%), Gaps = 3/306 (0%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 IVALGGGHGL+ATL A RRLT VTAVVTVADDGGSSGRLR+EL V+PPGDLRMALAALA Sbjct 17 IVALGGGHGLFATLQAVRRLTVDVTAVVTVADDGGSSGRLRAELGVIPPGDLRMALAALA 76 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 SD P W +QHRFGG GALAGH +GNL+LAGL+EVL DPV ALDE+ R+L ++GRV Sbjct 77 SDEPEIVDWTRTIQHRFGGVGALAGHSVGNLILAGLTEVLGDPVVALDEMARLLRIRGRV 136 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM P+AL+IEADV GLE DPR+ R IRGQVA+ATTPGKVRRVRLLP++PPA AV AI Sbjct 137 LPMSPIALEIEADVQGLEEDPRVSRCIRGQVAVATTPGKVRRVRLLPSNPPACPDAVTAI 196 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 ADLVVLGPGSWF+SVIPHVLVP L +L +T AR+ LVLNL EPGETAGFS ERHLH Sbjct 197 DRADLVVLGPGSWFSSVIPHVLVPELVESLSSTKARKVLVLNLAPEPGETAGFSAERHLH 256 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVA--RPGTP-LHDPG 301 VL+QH P F V +++D+ VP+ RERE L+R A AEV +ADVA PG +HDP Sbjct 257 VLSQHVPDFRVDYVVVDSASVPAGREREHLQRAADQFSAEVRYADVADTSPGAAHVHDPA 316 Query 302 KLAAVL 307 KLA VL Sbjct 317 KLADVL 322 >gi|312139600|ref|YP_004006936.1| hypothetical protein REQ_21990 [Rhodococcus equi 103S] gi|311888939|emb|CBH48252.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=353 Score = 380 bits (976), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 217/309 (71%), Positives = 244/309 (79%), Gaps = 0/309 (0%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 IVA GGGHGLYATLSAARRL+ VTAVVTVADDGGSSGRLR+EL ++PPGDLRMALAALA Sbjct 15 IVAFGGGHGLYATLSAARRLSSDVTAVVTVADDGGSSGRLRNELGMIPPGDLRMALAALA 74 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 + +P R W +QHRFGGSGALAGH +GNL+LAGL+EVL DPVAALD + R+L V+GRV Sbjct 75 AQTPDVRSWTETVQHRFGGSGALAGHSVGNLILAGLTEVLGDPVAALDTVARLLQVEGRV 134 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM ALQIEADV GLE DPR+ R IRGQVA+ATTPGKVRRVRLLP DPPA A+ A+ Sbjct 135 LPMSTQALQIEADVVGLETDPRVSRCIRGQVAVATTPGKVRRVRLLPADPPACPDALAAL 194 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 AADL VLGPGSWF+SVIPHVLVP L L T AR+ LVLNL EPGETAGFS ERHLH Sbjct 195 GAADLAVLGPGSWFSSVIPHVLVPELLDGLLRTPARKVLVLNLAPEPGETAGFSAERHLH 254 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKLA 304 VL QHAP F V +++D+ VP+ RER+ L R AT L AEV +ADVA GT H GKLA Sbjct 255 VLCQHAPEFRVDHVVVDSASVPAGRERDHLCRAATHLGAEVVYADVAEDGTHKHHAGKLA 314 Query 305 AVLDGVCAR 313 VL G+ R Sbjct 315 DVLAGLVDR 323 >gi|325676725|ref|ZP_08156399.1| protein of hypothetical function UPF0052 and CofD [Rhodococcus equi ATCC 33707] gi|325552507|gb|EGD22195.1| protein of hypothetical function UPF0052 and CofD [Rhodococcus equi ATCC 33707] Length=353 Score = 380 bits (976), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 217/309 (71%), Positives = 244/309 (79%), Gaps = 0/309 (0%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 IVA GGGHGLYATLSAARRL+ VTAVVTVADDGGSSGRLR+EL ++PPGDLRMALAALA Sbjct 15 IVAFGGGHGLYATLSAARRLSSDVTAVVTVADDGGSSGRLRNELGMIPPGDLRMALAALA 74 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 + +P R W +QHRFGGSGALAGH +GNL+LAGL+EVL DPVAALD + R+L V+GRV Sbjct 75 AQTPDVRSWTETVQHRFGGSGALAGHSVGNLILAGLTEVLGDPVAALDTVARLLQVEGRV 134 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM ALQIEADV GLE DPR+ R IRGQVA+ATTPGKVRRVRLLP DPPA A+ A+ Sbjct 135 LPMSTQALQIEADVVGLETDPRVSRCIRGQVAVATTPGKVRRVRLLPADPPACPDALAAL 194 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 AADL VLGPGSWF+SVIPHVLVP L L T AR+ LVLNL EPGETAGFS ERHLH Sbjct 195 GAADLAVLGPGSWFSSVIPHVLVPELLDGLLRTPARKVLVLNLAPEPGETAGFSAERHLH 254 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKLA 304 VL QHAP F V +++D+ VP+ RER+ L R AT L AEV +ADVA GT H GKLA Sbjct 255 VLCQHAPEFRVDHVVVDSASVPAGRERDHLCRAATHLGAEVVYADVAEDGTHKHHAGKLA 314 Query 305 AVLDGVCAR 313 VL G+ R Sbjct 315 DVLAGLVDR 323 >gi|296140242|ref|YP_003647485.1| hypothetical protein Tpau_2543 [Tsukamurella paurometabola DSM 20162] gi|296028376|gb|ADG79146.1| protein of unknown function UPF0052 and CofD [Tsukamurella paurometabola DSM 20162] Length=320 Score = 378 bits (970), Expect = 8e-103, Method: Compositional matrix adjust. Identities = 197/315 (63%), Positives = 232/315 (74%), Gaps = 0/315 (0%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 + ALGGGHGL+ATL A R L +TA+VTVADDGGSSGRLR+EL ++PPGDLRMALAAL Sbjct 6 VAALGGGHGLFATLRAMRTLDADITAIVTVADDGGSSGRLRTELGIIPPGDLRMALAALM 65 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 D G WA ILQHRFGG GA+AGHP+GNL+LAGL EVL DPV ALD L G++GRV Sbjct 66 PDDDRGEFWAGILQHRFGGGGAMAGHPVGNLLLAGLCEVLGDPVDALDALVDRFGIEGRV 125 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM P L+IEADV+GLE DPR+ R+IRGQVA+A TPG+VRRVRLLP+ P A +++AI Sbjct 126 LPMVPGPLRIEADVTGLEEDPRLSRVIRGQVAVAVTPGQVRRVRLLPSHPEACVDSIEAI 185 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 + AD+V LGPGSWF+SVIPHVLVP AL+ TSARR L+LNL EPGET G+S ERHLH Sbjct 186 LGADVVTLGPGSWFSSVIPHVLVPEQLDALKRTSARRVLILNLAPEPGETVGYSPERHLH 245 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTPLHDPGKLA 304 VLA HA G D+I+DAE VP ERE L R +L A HF V PGT HDP LA Sbjct 246 VLAAHADGLQFDDVIVDAETVPPGPEREHLVRATALLGARPHFVTVGVPGTHQHDPAALA 305 Query 305 AVLDGVCARDVGASE 319 A + V + ++ Sbjct 306 AAIGDVAYSESSGTQ 320 >gi|213965611|ref|ZP_03393805.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213951770|gb|EEB63158.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=315 Score = 368 bits (944), Expect = 9e-100, Method: Compositional matrix adjust. Identities = 186/308 (61%), Positives = 235/308 (77%), Gaps = 5/308 (1%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 I +LGGGHGL+ATL A R++ +VTAVVTVADDGGSSGRLR EL +PPGDLRMALAAL+ Sbjct 4 ITSLGGGHGLFATLRADRQVADHVTAVVTVADDGGSSGRLRRELGQIPPGDLRMALAALS 63 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 +D+ G LW LQHRFGG+GALAGH IGNL++AGL+ V+ + V ALDE+GR+L ++GRV Sbjct 64 ADTEKGDLWEKTLQHRFGGTGALAGHAIGNLIIAGLTSVMGNEVDALDEIGRLLQIQGRV 123 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 +PM P+ L+IEA+V GLE D R+ R +RGQVA+ATTPG+VRR+RL+P PPA+ +A++AI Sbjct 124 VPMSPIPLEIEAEVVGLEQDARVVRQVRGQVAVATTPGQVRRIRLIPETPPASEEAIEAI 183 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 + ADLV LGPGSWFTSV+PH+ VPGL AL+ T A +VLNLVAEPGETAGFS ERH+H Sbjct 184 LNADLVTLGPGSWFTSVLPHLQVPGLRDALQETKATTVVVLNLVAEPGETAGFSSERHIH 243 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPG-----TPLHD 299 +L QHAP ++ +++D ++ ERE L+R A L A+V FADV T H Sbjct 244 MLTQHAPNLKLNYVLVDDNTPLADTEREYLQRAADSLDAKVVFADVQEVDDRGALTGRHS 303 Query 300 PGKLAAVL 307 P KLA L Sbjct 304 PEKLAVAL 311 >gi|262202288|ref|YP_003273496.1| hypothetical protein Gbro_2361 [Gordonia bronchialis DSM 43247] gi|262085635|gb|ACY21603.1| protein of unknown function UPF0052 and CofD [Gordonia bronchialis DSM 43247] Length=337 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 207/335 (62%), Positives = 242/335 (73%), Gaps = 20/335 (5%) Query 1 MTDG---IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLR 57 MTD IVALGGGHGLYATL+A R L+P V+AVVTVADDGGSSGRLR+EL V+PPGDLR Sbjct 1 MTDSPMRIVALGGGHGLYATLTAMRYLSPDVSAVVTVADDGGSSGRLRAELGVIPPGDLR 60 Query 58 MALAALAS-----------------DSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGL 100 MAL AL S D WA QHRFGG GALAGHPIGNL+LAGL Sbjct 61 MALVALMSAPAALDELAGGADAANDDVQRHARWAEAFQHRFGGRGALAGHPIGNLLLAGL 120 Query 101 SEVLADPVAALDELGRILGVKGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATT 160 +E+L D AALDEL + G+ GRVLPM V L+IEADVSGLE+DPR+ R IRGQVA+ATT Sbjct 121 TEILGDTEAALDELRSVFGIDGRVLPMSTVPLEIEADVSGLESDPRISRCIRGQVAVATT 180 Query 161 PGKVRRVRLLPTDPPATRQAVDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSAR 220 PGKVRRVRLLP+DPPA+ A+ AI ADLVVLGPGSWF+SVIPHVLVP AL+ T+AR Sbjct 181 PGKVRRVRLLPSDPPASASAIAAIENADLVVLGPGSWFSSVIPHVLVPEQRKALQRTAAR 240 Query 221 RALVLNLVAEPGETAGFSVERHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATM 280 + L +NL EPGET GFSVERHLHVL HA F V +++DA VP+ RER+ L R A Sbjct 241 KILFVNLAPEPGETPGFSVERHLHVLHAHADQFRVDHVVVDAASVPAGRERDHLVRAAAK 300 Query 281 LQAEVHFADVARPGTPLHDPGKLAAVLDGVCARDV 315 A + DVA G +HDP K+AA++ +C R++ Sbjct 301 FGAALDVGDVATAGQQVHDPAKVAALVKELCEREL 335 >gi|296117954|ref|ZP_06836537.1| hypothetical protein HMPREF0281_00458 [Corynebacterium ammoniagenes DSM 20306] gi|295969185|gb|EFG82427.1| hypothetical protein HMPREF0281_00458 [Corynebacterium ammoniagenes DSM 20306] Length=320 Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 189/319 (60%), Positives = 231/319 (73%), Gaps = 6/319 (1%) Query 5 IVALGGGHGLYATLSAARRLTP-YVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 + LGGGHGLY TL AAR+ P ++A+VTVADDGGSSGRLR ELD++PPGDLRMALAAL Sbjct 1 MACLGGGHGLYQTLLAARQCDPASISAIVTVADDGGSSGRLRRELDIIPPGDLRMALAAL 60 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 +S +G LWAT LQHRFGG+GALAGH +GNL++AGL+EV+ D AALD++ + G GR Sbjct 61 SSRDNNGDLWATTLQHRFGGTGALAGHAVGNLLIAGLTEVMGDMQAALDKVAEVTGSSGR 120 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 VLPM L IEA+V+GL+ DPR+ R +RGQVA+ATTPG+VRRV LLP P A + + A Sbjct 121 VLPMVNQPLSIEAEVAGLDDDPRVMRPVRGQVAVATTPGQVRRVHLLPDAPQANPRVLQA 180 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 I AD++ LGPGSWF+SV+PHVLVP + A+ + A R LVLNL AEPGET+GFSVERHL Sbjct 181 INEADIITLGPGSWFSSVLPHVLVPQIVDAITRSDALRLLVLNLSAEPGETSGFSVERHL 240 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVA---RPGTPL--H 298 HVLAQHAP V +IID + + +R ++R A L AEV F DV G L H Sbjct 241 HVLAQHAPNLRVDRVIIDQHMLLAGSDRTHVQRAAAQLGAEVVFEDVCMVTNDGVELNRH 300 Query 299 DPGKLAAVLDGVCARDVGA 317 DP KLA V+D V V A Sbjct 301 DPAKLARVIDSVHGEWVAA 319 >gi|334563142|ref|ZP_08516133.1| hypothetical protein CbovD2_01086 [Corynebacterium bovis DSM 20582] Length=355 Score = 348 bits (893), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 189/310 (61%), Positives = 227/310 (74%), Gaps = 5/310 (1%) Query 3 DGIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAA 62 D + ALGGGHGL++TL AARR VTAVVTVADDGGSSGR+R EL +PPGDLRMALAA Sbjct 16 DRVAALGGGHGLFSTLRAARRAAASVTAVVTVADDGGSSGRMRRELGSLPPGDLRMALAA 75 Query 63 LASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKG 122 L D+P GRLW LQHRF G GALAGH +GNL+L GLSEV+ D VAALDEL +LG++G Sbjct 76 LTEDTPRGRLWERTLQHRFAGHGALAGHAVGNLVLTGLSEVMGDHVAALDELAVLLGIRG 135 Query 123 RVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVD 182 RVLPM PV L +EA+VSGL DPR +RGQVA+A+TPG+VRRVRL+P D PAT AV+ Sbjct 136 RVLPMSPVPLDLEAEVSGLGEDPREVTAVRGQVAVASTPGQVRRVRLIPGDAPATEPAVE 195 Query 183 AIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERH 242 A++ AD+V LGPGSWF+SVIPH+LVPG+ AAL T A + L+LNLV+EPGET+GFS+ERH Sbjct 196 AVLDADVVTLGPGSWFSSVIPHLLVPGIDAALDRTDAVKVLILNLVSEPGETSGFSMERH 255 Query 243 LHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPG-----TPL 297 +H+L QH P + ++D V RER L R A L A V + DV + Sbjct 256 IHMLRQHCPSLRMDVTVVDRSTVSDARERRALERAAGQLGARVIYRDVRADDDRGRWSDR 315 Query 298 HDPGKLAAVL 307 H P KLA VL Sbjct 316 HSPEKLARVL 325 >gi|255325033|ref|ZP_05366139.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311739493|ref|ZP_07713328.1| protein of hypothetical function UPF0052 and CofD [Corynebacterium pseudogenitalium ATCC 33035] gi|255297598|gb|EET76909.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311305309|gb|EFQ81377.1| protein of hypothetical function UPF0052 and CofD [Corynebacterium pseudogenitalium ATCC 33035] Length=327 Score = 345 bits (885), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 176/309 (57%), Positives = 225/309 (73%), Gaps = 6/309 (1%) Query 5 IVALGGGHGLYATLSAAR-RLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 +V LGGGHGLY TL +AR ++A+VTVADDGGSSGRLR EL+++PPGDLRMALAAL Sbjct 7 MVCLGGGHGLYQTLLSARFSEAADISAIVTVADDGGSSGRLRRELEIIPPGDLRMALAAL 66 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 A+ P G LWA LQHRFGG+GA+AGH +GNLM+AGL++VL D AALD + + +GR Sbjct 67 ANSDPVGDLWARTLQHRFGGNGAMAGHAVGNLMIAGLTDVLGDYQAALDTIAELTNSQGR 126 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 V P+ AL+IEADV+GL+ DPR+ R +RGQVA+A+TPG+VRRVR++P P A A+DA Sbjct 127 VFPVVNQALEIEADVAGLDDDPRVMRQVRGQVAVASTPGQVRRVRIVPEQPSANPDALDA 186 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 I ADL+ +GPGSWF+SV+PH LVP + A+ A+ A R +VLNL AEPGET GFS ERHL Sbjct 187 IQRADLITIGPGSWFSSVLPHTLVPEVVDAISASDALRVVVLNLSAEPGETNGFSAERHL 246 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVAR-----PGTPLH 298 HVLAQHAP + I++D +P++ ER ++R A L A FADV++ H Sbjct 247 HVLAQHAPDLRIDRILVDEAALPTDSERVYIQRAAQSLGARATFADVSQVDANGRSINKH 306 Query 299 DPGKLAAVL 307 DP KL+ L Sbjct 307 DPEKLSTAL 315 >gi|227833022|ref|YP_002834729.1| hypothetical protein cauri_1198 [Corynebacterium aurimucosum ATCC 700975] gi|227454038|gb|ACP32791.1| hypothetical protein cauri_1198 [Corynebacterium aurimucosum ATCC 700975] Length=332 Score = 345 bits (884), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 183/327 (56%), Positives = 233/327 (72%), Gaps = 11/327 (3%) Query 5 IVALGGGHGLYATLSAARRL-TPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 + +LGGGHGLY TL AARR ++A+VTVADDGGSSGRLR E+D++PPGDLRMALAAL Sbjct 1 MASLGGGHGLYQTLLAARRTGAEAISAIVTVADDGGSSGRLRREMDIIPPGDLRMALAAL 60 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 +SDS G++WA+ LQHRF +GA+AGH +GNL++AGL+EVL D AALD +GR+ GR Sbjct 61 SSDSEEGQMWASTLQHRFQSTGAMAGHAVGNLLIAGLTEVLGDFQAALDAVGRLTHSAGR 120 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 VLP + L IEADV+GL+ DPR+ R +RGQVA+A+T G+VRRVR++P P A + + A Sbjct 121 VLPAVNLPLDIEADVAGLDDDPRIMRSVRGQVAVASTVGQVRRVRIIPEKPQANPETIAA 180 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 + ADL+ LGPGSWF+SV+PHVLVP + A+ ++ A R +VLNL AEPGET GFS ERHL Sbjct 181 LRDADLITLGPGSWFSSVLPHVLVPEIVNAITSSDALRVVVLNLSAEPGETQGFSAERHL 240 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVAR---PGTPL--H 298 HVLAQHAP V +I+D +P+E ER ++R A++L A F DV + G L H Sbjct 241 HVLAQHAPNLRVDKVIVDGSGLPNESERVFVQRAASVLGATAVFRDVCQADENGNSLNKH 300 Query 299 DPGKLAAVL-----DGVCARDVGASEP 320 P KLA VL D RD A P Sbjct 301 CPDKLAQVLAELYTDYAAQRDSSAGAP 327 >gi|262182490|ref|ZP_06041911.1| hypothetical protein CaurA7_00719 [Corynebacterium aurimucosum ATCC 700975] Length=339 Score = 345 bits (884), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 183/327 (56%), Positives = 233/327 (72%), Gaps = 11/327 (3%) Query 5 IVALGGGHGLYATLSAARRL-TPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 + +LGGGHGLY TL AARR ++A+VTVADDGGSSGRLR E+D++PPGDLRMALAAL Sbjct 8 MASLGGGHGLYQTLLAARRTGAEAISAIVTVADDGGSSGRLRREMDIIPPGDLRMALAAL 67 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 +SDS G++WA+ LQHRF +GA+AGH +GNL++AGL+EVL D AALD +GR+ GR Sbjct 68 SSDSEEGQMWASTLQHRFQSTGAMAGHAVGNLLIAGLTEVLGDFQAALDAVGRLTHSAGR 127 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 VLP + L IEADV+GL+ DPR+ R +RGQVA+A+T G+VRRVR++P P A + + A Sbjct 128 VLPAVNLPLDIEADVAGLDDDPRIMRSVRGQVAVASTVGQVRRVRIIPEKPQANPETIAA 187 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 + ADL+ LGPGSWF+SV+PHVLVP + A+ ++ A R +VLNL AEPGET GFS ERHL Sbjct 188 LRDADLITLGPGSWFSSVLPHVLVPEIVNAITSSDALRVVVLNLSAEPGETQGFSAERHL 247 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVAR---PGTPL--H 298 HVLAQHAP V +I+D +P+E ER ++R A++L A F DV + G L H Sbjct 248 HVLAQHAPNLRVDKVIVDGSGLPNESERVFVQRAASVLGATAVFRDVCQADENGNSLNKH 307 Query 299 DPGKLAAVL-----DGVCARDVGASEP 320 P KLA VL D RD A P Sbjct 308 CPDKLAQVLAELYTDYAAQRDSSAGAP 334 >gi|68536080|ref|YP_250785.1| hypothetical protein jk1003 [Corynebacterium jeikeium K411] gi|260578775|ref|ZP_05846682.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|68263679|emb|CAI37167.1| conserved hypothetical protein [Corynebacterium jeikeium K411] gi|258603073|gb|EEW16343.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length=335 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 172/313 (55%), Positives = 223/313 (72%), Gaps = 5/313 (1%) Query 4 GIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 I LGGGHGL+ TL +AR + YV+A+VTVADDGGSSGR+R EL +PPGDLRMALAAL Sbjct 13 NIACLGGGHGLFNTLRSARTIADYVSAIVTVADDGGSSGRIRRELGSLPPGDLRMALAAL 72 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 D+ GR+W +LQHRFGGSGAL GH +GN ++ GL++V+ + ALDE+GR+LG++GR Sbjct 73 TRDNERGRMWEEVLQHRFGGSGALKGHALGNFLITGLAQVMGSEMEALDEIGRLLGIEGR 132 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 V+PM L +EA+V GLE DPR +RGQVA+A+T G+VRRV+L P +PPA+++AV+A Sbjct 133 VIPMSNEPLDLEAEVLGLEEDPREVVAVRGQVAVASTLGEVRRVKLYPENPPASKEAVEA 192 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 I ADLV +GPGSWF+SVIPH+LVP + AL T A +ALVLNLV EPGETAG S+E H+ Sbjct 193 IRNADLVSMGPGSWFSSVIPHLLVPEIVDALNQTKAVKALVLNLVPEPGETAGMSLEHHI 252 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPG-----TPLH 298 H++ QH P + +I+D +P R + R A L A+V + DV T H Sbjct 253 HMVRQHCPSLQIDVVIVDLSTMPVASTRRHIDRAAAALGAKVIYRDVREDDNRGRWTDRH 312 Query 299 DPGKLAAVLDGVC 311 +P KLAAVL V Sbjct 313 NPAKLAAVLQEVS 325 >gi|19552802|ref|NP_600804.1| hypothetical protein NCgl1528 [Corynebacterium glutamicum ATCC 13032] gi|62390472|ref|YP_225874.1| hypothetical protein cg1793 [Corynebacterium glutamicum ATCC 13032] gi|21324359|dbj|BAB98983.1| Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032] gi|41325809|emb|CAF21598.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length=341 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 174/309 (57%), Positives = 225/309 (73%), Gaps = 6/309 (1%) Query 5 IVALGGGHGLYATLSAARRLTPY-VTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 I +LGGGHGL+ TL AA+ +P + AVVTVADDGGSSGR+R EL +PPGDLRMALAAL Sbjct 23 ITSLGGGHGLFQTLRAAQICSPTTINAVVTVADDGGSSGRIRRELGQIPPGDLRMALAAL 82 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 +D+ G LW +LQHRFGG GALAGH +GNL++ L+++L ALD++ ++ G KGR Sbjct 83 IADAEEGGLWENLLQHRFGGHGALAGHALGNLVIVALTDILGTSQHALDQIAQLAGAKGR 142 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 ++P+C L +EA+VSGL++D R+ R +RGQVA+A TPG+VRRVR++P +P A++A Sbjct 143 IIPVCAEPLDLEAEVSGLDSDARVMRQVRGQVAVAATPGQVRRVRIIPDNPEPNPAAIEA 202 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 I+ ADLV LGPGSWF+SVIPH+LVPG+ AL T A + +VLNL +EPGETAGFS ERH+ Sbjct 203 ILDADLVTLGPGSWFSSVIPHILVPGIVDALAQTKATKTVVLNLTSEPGETAGFSAERHI 262 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADV-ARPG----TPLH 298 HVL QHA V +I+DA+ + S+ ER + R A L AEV F DV A G T +H Sbjct 263 HVLRQHARNLQVDQVIVDAKTLSSQTERNHVERAARTLGAEVSFHDVQAEDGRGRFTSIH 322 Query 299 DPGKLAAVL 307 DP KL A L Sbjct 323 DPAKLCAAL 331 >gi|237785562|ref|YP_002906267.1| hypothetical protein ckrop_0971 [Corynebacterium kroppenstedtii DSM 44385] gi|237758474|gb|ACR17724.1| conserved hypothetical protein [Corynebacterium kroppenstedtii DSM 44385] Length=367 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 177/313 (57%), Positives = 226/313 (73%), Gaps = 5/313 (1%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALA 64 + LGGGHGL+ATL AAR L+ V+A+VTVADDGGSSGRLR E + +PPGDLRMALAALA Sbjct 43 MACLGGGHGLFATLRAARTLSDDVSAIVTVADDGGSSGRLRKEFNSIPPGDLRMALAALA 102 Query 65 SDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRV 124 +D P GRLW ++LQHRFGG GALAGH +GNL++ GL +V+ D V AL E+ +++ ++GRV Sbjct 103 ADDPEGRLWESVLQHRFGGRGALAGHAVGNLIIQGLIDVMGDEVEALAEVAKLMRIRGRV 162 Query 125 LPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDAI 184 LPM P L IEA+V GLE DPR+ +RGQVA+ATTPG+VRRV+L+P +PP++ +DAI Sbjct 163 LPMSPEPLDIEAEVGGLEDDPRVVSPVRGQVAVATTPGQVRRVKLIPENPPSSAPVIDAI 222 Query 185 MAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLH 244 M AD+V LGPGSWF+SV+PH+LVP + AL+ T A + +V+NLVAEPGET GF+VERHLH Sbjct 223 MNADVVTLGPGSWFSSVVPHILVPDVVKALQETQAHKVVVVNLVAEPGETPGFTVERHLH 282 Query 245 VLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGT-----PLHD 299 +L QH ++ +I+D V RER L R A AE+ DV H Sbjct 283 MLQQHCQDLSLDTVIVDEHSVTGTRERMHLSRAAANFGAELTIGDVRHDDEQGRWLSTHS 342 Query 300 PGKLAAVLDGVCA 312 P KLA VL V + Sbjct 343 PRKLARVLSEVYS 355 >gi|306836165|ref|ZP_07469150.1| protein of hypothetical function UPF0052 and CofD [Corynebacterium accolens ATCC 49726] gi|304567948|gb|EFM43528.1| protein of hypothetical function UPF0052 and CofD [Corynebacterium accolens ATCC 49726] Length=319 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 178/309 (58%), Positives = 228/309 (74%), Gaps = 6/309 (1%) Query 5 IVALGGGHGLYATLSAARRLTPY-VTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 +V LGGGHGLY TL +ARR ++A+VTVADDGGSSGRLR ELD++PPGDLRMALAAL Sbjct 1 MVCLGGGHGLYQTLLSARRSNAADISAIVTVADDGGSSGRLRRELDIIPPGDLRMALAAL 60 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 A D+ G LW LQHRFGG+GA+AGH +GNLM+AGL+ VL D AALD + + GR Sbjct 61 ADDNRIGELWGKTLQHRFGGNGAMAGHAVGNLMIAGLTGVLDDYQAALDAVAELTHSHGR 120 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 V+P+ P L+IEADVSGL+ DPR+ R +RGQVA+A+TPG VRRVR+LP P A+ A++A Sbjct 121 VIPVVPHPLEIEADVSGLDDDPRVMRQVRGQVAVASTPGHVRRVRILPEAPQASPAALEA 180 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 I ADL+ +GPGSWF+SV+PH LVP + A+ ++A R ++LNL AEPGET GFS ERH+ Sbjct 181 IRQADLITIGPGSWFSSVLPHTLVPEIVQAISESNALRVVMLNLSAEPGETQGFSAERHV 240 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVA---RPGTPL--H 298 HVLA+HAP + I++DA +P+E ER ++R A L A FADV+ G L H Sbjct 241 HVLARHAPNLRIDRIVVDAAALPNESERVYVQRAAQALGARAVFADVSIQDDNGQRLMKH 300 Query 299 DPGKLAAVL 307 DP KL++V+ Sbjct 301 DPDKLSSVI 309 >gi|227503575|ref|ZP_03933624.1| protein of hypothetical function UPF0052 and CofD [Corynebacterium accolens ATCC 49725] gi|227075611|gb|EEI13574.1| protein of hypothetical function UPF0052 and CofD [Corynebacterium accolens ATCC 49725] Length=319 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 178/309 (58%), Positives = 227/309 (74%), Gaps = 6/309 (1%) Query 5 IVALGGGHGLYATLSAARRLTPY-VTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 +V LGGGHGLY TL +ARR ++A+VTVADDGGSSGRLR ELD++PPGDLRMALAAL Sbjct 1 MVCLGGGHGLYQTLLSARRSDAADISAIVTVADDGGSSGRLRRELDIIPPGDLRMALAAL 60 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 A D+ G LW LQHRFGG+GA+AGH +GNLM+AGL+ VL D AALD + + GR Sbjct 61 ADDNRIGELWGKTLQHRFGGNGAMAGHAVGNLMIAGLTGVLGDYQAALDAVAELTHSHGR 120 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 V+P+ P L+IEADVSGL+ DPR+ R +RGQVA+A+TPG VRRVR+LP P A A++A Sbjct 121 VIPVVPHPLEIEADVSGLDDDPRVMRQVRGQVAVASTPGHVRRVRILPEAPQANPAALEA 180 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 I ADL+ +GPGSWF+SV+PH LVP + A+ ++A R ++LNL AEPGET GFS ERH+ Sbjct 181 IRQADLITIGPGSWFSSVLPHTLVPEIVQAISESNALRVVMLNLSAEPGETQGFSAERHV 240 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVA---RPGTPL--H 298 HVLA+HAP + I++DA +P+E ER ++R A L A FADV+ G L H Sbjct 241 HVLARHAPNLRIDRIVVDAAALPNESERVYVQRAAQALGARAVFADVSIQDDNGQRLMKH 300 Query 299 DPGKLAAVL 307 DP KL++V+ Sbjct 301 DPDKLSSVI 309 >gi|344044963|gb|EGV40637.1| hypothetical protein CgS9114_06555 [Corynebacterium glutamicum S9114] Length=341 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 173/309 (56%), Positives = 224/309 (73%), Gaps = 6/309 (1%) Query 5 IVALGGGHGLYATLSAARRLTPY-VTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 I +LGGGHGL+ TL AA+ +P + AVVTVADDGGSSGR+R EL +PPGDLRMALAAL Sbjct 23 ITSLGGGHGLFQTLRAAQICSPTTINAVVTVADDGGSSGRIRRELGQIPPGDLRMALAAL 82 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 +D+ G LW +LQHRFGG GALAGH +GNL++ L+++L ALD++ ++ G KGR Sbjct 83 IADAEEGGLWENLLQHRFGGHGALAGHALGNLVIVALTDILGTSQHALDQIAQLAGAKGR 142 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 ++P+C L +EA+VSGL++D R+ R +RGQVA+A TPG+VRRVR++P +P A++A Sbjct 143 IIPVCAEPLDLEAEVSGLDSDARVMRQVRGQVAVAATPGQVRRVRIIPDNPEPNPAAIEA 202 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 I+ ADLV LGPGSWF+SVIPH+LVP + AL T A + +VLNL +EPGETAGFS ERH+ Sbjct 203 ILDADLVTLGPGSWFSSVIPHILVPEIVDALAQTKATKTVVLNLTSEPGETAGFSAERHI 262 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADV-ARPG----TPLH 298 HVL QHA V +I+DA+ + S+ ER + R A L AEV F DV A G T +H Sbjct 263 HVLRQHARNLQVDQVIVDAKTLSSQTERNHVERAARTLGAEVSFHDVQAEDGRGRFTSIH 322 Query 299 DPGKLAAVL 307 DP KL A L Sbjct 323 DPAKLCAAL 331 >gi|145295711|ref|YP_001138532.1| hypothetical protein cgR_1638 [Corynebacterium glutamicum R] gi|140845631|dbj|BAF54630.1| hypothetical protein [Corynebacterium glutamicum R] Length=341 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 173/309 (56%), Positives = 224/309 (73%), Gaps = 6/309 (1%) Query 5 IVALGGGHGLYATLSAARRLTPY-VTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 I +LGGGHGL+ TL AA+ +P + AVVTVADDGGSSGR+R EL +PPGDLRMALAAL Sbjct 23 ITSLGGGHGLFQTLRAAQICSPTTINAVVTVADDGGSSGRIRRELGQIPPGDLRMALAAL 82 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 +D+ G LW +LQHRFGG GALAGH +GNL++ L+++L ALD++ ++ G KGR Sbjct 83 IADAEEGGLWENLLQHRFGGHGALAGHALGNLVIVALTDILGTSQHALDQIAQLAGAKGR 142 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 ++P+C L +EA+VSGL++D R+ R +RGQVA+A TPG+VRRVR++P +P A++A Sbjct 143 IIPVCAEPLDLEAEVSGLDSDARVMRQVRGQVAVAATPGQVRRVRIIPDNPEPNPAAIEA 202 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 I+ ADLV LGPGSWF+SVIPH+LVP + AL T A + +VLNL +EPGETAGFS ERH+ Sbjct 203 ILDADLVTLGPGSWFSSVIPHILVPEIVDALAQTKATKTVVLNLTSEPGETAGFSAERHI 262 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADV-ARPG----TPLH 298 HVL QHA V +I+DA+ + S+ ER + R A L AEV F DV A G T +H Sbjct 263 HVLRQHARNLQVDQVIVDAKTLSSKTERNHVERAARTLGAEVSFHDVQAEDGRGRFTSIH 322 Query 299 DPGKLAAVL 307 DP KL A L Sbjct 323 DPAKLCAAL 331 >gi|326382179|ref|ZP_08203871.1| hypothetical protein SCNU_04506 [Gordonia neofelifaecis NRRL B-59395] gi|326198909|gb|EGD56091.1| hypothetical protein SCNU_04506 [Gordonia neofelifaecis NRRL B-59395] Length=343 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 198/322 (62%), Positives = 231/322 (72%), Gaps = 16/322 (4%) Query 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL- 63 + ALGGGHGL+ TL+A R LT VTAVVTVADDGGSSGRLR+EL ++PPGDLRMALAAL Sbjct 22 VTALGGGHGLFNTLTALRFLTADVTAVVTVADDGGSSGRLRAELGLIPPGDLRMALAALM 81 Query 64 --------------ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVA 109 AS + H R WA +LQHRFGG GALAGHPIGNL+L+GL+EV D V Sbjct 82 AAPAALEARRRVDPASAARHER-WARMLQHRFGGYGALAGHPIGNLLLSGLNEVTGDVVE 140 Query 110 ALDELGRILGVKGRVLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRL 169 ALD+L + V GRVLPM V L IEADVSGLE DPR+ R+IRGQVA+ATTPGK RRVRL Sbjct 141 ALDDLIDLFDVDGRVLPMALVPLVIEADVSGLEKDPRVSRVIRGQVAVATTPGKPRRVRL 200 Query 170 LPTDPPATRQAVDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVA 229 +P P +A AI+ AD+V LGPGSWF+SVIPHVLVP AAL TSAR+ L +NL A Sbjct 201 IPDSPAGCAEAAAAILDADVVTLGPGSWFSSVIPHVLVPDQLAALSETSARKMLFVNLAA 260 Query 230 EPGETAGFSVERHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFAD 289 EPGET GFSVERHLHVL HAP V D+++D+ VP ER+ L R A A++ AD Sbjct 261 EPGETTGFSVERHLHVLHAHAPTLRVDDVVVDSASVPEGLERDHLERAAGRFGAQLRVAD 320 Query 290 VARPGTPLHDPGKLAAVLDGVC 311 +A PGT HDP K AA + G+ Sbjct 321 LAVPGTATHDPVKTAATVVGLI 342 >gi|25028265|ref|NP_738319.1| hypothetical protein CE1709 [Corynebacterium efficiens YS-314] gi|259507324|ref|ZP_05750224.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23493549|dbj|BAC18519.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165128|gb|EEW49682.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=356 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 177/309 (58%), Positives = 216/309 (70%), Gaps = 6/309 (1%) Query 5 IVALGGGHGLYATLSAARRLTPY-VTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 I +LGGGHGL+ TL A R P + AVVTVADDGGSSGR+R EL +PPGDLRMALAAL Sbjct 37 ITSLGGGHGLFQTLRAVRNCGPERINAVVTVADDGGSSGRIRHELGQIPPGDLRMALAAL 96 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 +D G LW +LQHRFGG GALAGH +GNL++ L+++ ALD++ + G +GR Sbjct 97 TTDDEDGMLWEGLLQHRFGGHGALAGHALGNLLIVALTDIFGTSQLALDKVAELAGSRGR 156 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 VLP+C L +EA+VSGL+ DPR+ R +RGQVA+A TPG+VRRVRL+P P A +AV A Sbjct 157 VLPVCVEPLDLEAEVSGLDQDPRLIRQVRGQVAVAATPGQVRRVRLIPERPEANPEAVQA 216 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 I+ ADLV LGPGSWF+SVIPH+LVP + AL T A + LVLNL AEPGET GFS ERH+ Sbjct 217 ILDADLVTLGPGSWFSSVIPHILVPDVVEALDQTDAVKILVLNLTAEPGETNGFSAERHI 276 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADV-ARPG----TPLH 298 HVL QHA V +I+D+ V ER+ + RTA L AEV F DV A G T +H Sbjct 277 HVLRQHATNLKVDHVIVDSGTVTLTSERDHIARTAKTLGAEVSFQDVRAEDGRGRFTSVH 336 Query 299 DPGKLAAVL 307 DP KL L Sbjct 337 DPSKLCDAL 345 >gi|227549220|ref|ZP_03979269.1| protein of hypothetical function UPF0052 and CofD [Corynebacterium lipophiloflavum DSM 44291] gi|227078674|gb|EEI16637.1| protein of hypothetical function UPF0052 and CofD [Corynebacterium lipophiloflavum DSM 44291] Length=319 Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 174/304 (58%), Positives = 217/304 (72%), Gaps = 6/304 (1%) Query 5 IVALGGGHGLYATLSAARRL-TPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 LGGGHGLY TL A RR ++ AVVTVADDGGSSGRLR EL ++PPGDLRMAL+AL Sbjct 4 FTCLGGGHGLYQTLLACRRAHAEHINAVVTVADDGGSSGRLRRELGMIPPGDLRMALSAL 63 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 D+ GRLW LQHRF G+GA+AGH +GNL+LAGLSE + AALD L G KGR Sbjct 64 MPDTETGRLWRDTLQHRFRGNGAMAGHAVGNLLLAGLSEEVGGMQAALDVLTTWAGAKGR 123 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 V+P+C L+IEADV+GL+ DPR+ R +RGQVA+ATTPG VRRVR+LP DPP R A+ A Sbjct 124 VIPVCGEPLEIEADVAGLDDDPRVLRSVRGQVAVATTPGSVRRVRILPADPPVNRAAIAA 183 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 IM AD+V +GPGSWF+SVIPH+LVP + +AL T A+ +VLNL E GET GF+ ERH+ Sbjct 184 IMNADVVTIGPGSWFSSVIPHLLVPDVVSALNETVAKVIVVLNLSPEAGETQGFTTERHI 243 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVAR-----PGTPLH 298 H+L+QHAPG V + + D++ + ER L+RTA + AE+ + DV T +H Sbjct 244 HLLSQHAPGLKVDNFVADSDINTTPGERTHLQRTAQRVGAEITYTDVRTVTADGQTTSVH 303 Query 299 DPGK 302 DP K Sbjct 304 DPEK 307 >gi|300784686|ref|YP_003764977.1| hypothetical protein AMED_2780 [Amycolatopsis mediterranei U32] gi|299794200|gb|ADJ44575.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340526109|gb|AEK41314.1| hypothetical protein RAM_14130 [Amycolatopsis mediterranei S699] Length=330 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 191/309 (62%), Positives = 223/309 (73%), Gaps = 11/309 (3%) Query 6 VALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALAS 65 VALGGGHGL+ATLSA RR+TP VTAVVTVADDGGSSGRLR EL ++PPGDLR A AA A+ Sbjct 4 VALGGGHGLHATLSAVRRVTPDVTAVVTVADDGGSSGRLRRELGLLPPGDLRQAFAAFAA 63 Query 66 DSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGRVL 125 + G LWA + QHRFGG GALAGH +GNL+LAGL EVL DPVAALDE R++GV GRVL Sbjct 64 ED-GGTLWAEVFQHRFGGDGALAGHAVGNLLLAGLFEVLGDPVAALDEACRLMGVSGRVL 122 Query 126 PMCPVALQIEADVSGLEA-DPRMFRLIRGQVAIATTPGKVRRVRLLPTD-----PPATRQ 179 PM P L+IE VSGL++ DP R IRGQVA+A+TPG+V+RV L P A + Sbjct 123 PMSPEPLEIEGQVSGLDSEDPAAVRTIRGQVAVASTPGQVQRVSLHSPGRSGRPPQACAE 182 Query 180 AVDAIMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSV 239 AVDA++AAD+V LGPGSWFTSV+PH+LVPGL AL T+A + LVLNLV +PGETAGFS Sbjct 183 AVDAVLAADVVFLGPGSWFTSVLPHLLVPGLHDALVHTAATKVLVLNLVPQPGETAGFSP 242 Query 240 ERHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGTP-LH 298 ERHL VL +HAP V +I D + VP + LRR A L H VA PG P H Sbjct 243 ERHLDVLFEHAPDLRVDAVIADRDSVP---DPANLRRAAERLGGRAHLGAVADPGVPGRH 299 Query 299 DPGKLAAVL 307 DP LA + Sbjct 300 DPDALARTM 308 >gi|225021372|ref|ZP_03710564.1| hypothetical protein CORMATOL_01391 [Corynebacterium matruchotii ATCC 33806] gi|224945754|gb|EEG26963.1| hypothetical protein CORMATOL_01391 [Corynebacterium matruchotii ATCC 33806] Length=335 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 169/309 (55%), Positives = 221/309 (72%), Gaps = 6/309 (1%) Query 5 IVALGGGHGLYATLSAARRLTP-YVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63 + +LGGGHGL+ TL+A R L P +TA+VTVADDGGSSGR+R EL +PPGDLRMAL+AL Sbjct 17 VASLGGGHGLFQTLTAVRLLHPDTITAIVTVADDGGSSGRIRRELGQIPPGDLRMALSAL 76 Query 64 ASDSPHGRLWATILQHRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGVKGR 123 A GR+W LQHRFGGSGALAGH +GN+++AGL ++L VAALD + +++ +GR Sbjct 77 APRDDEGRMWEATLQHRFGGSGALAGHAVGNMLIAGLYDILQSEVAALDVVAKLIRAEGR 136 Query 124 VLPMCPVALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTDPPATRQAVDA 183 VLP+C L+IEA+V GL+ADPR+ R +RGQVA+ATT G VRR RL+P + A +A+ A Sbjct 137 VLPVCEQPLEIEAEVGGLDADPRIVRQVRGQVAVATTVGSVRRARLVPENAVACEEAMTA 196 Query 184 IMAADLVVLGPGSWFTSVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHL 243 + ADL+ LGPGSWFTSV+PH+LVPG+ L + + +V+NL AEPGETAGF+ ER+L Sbjct 197 LQDADLITLGPGSWFTSVVPHLLVPGVTDVLERCTGMKIVVVNLDAEPGETAGFTAERYL 256 Query 244 HVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAEVHFADVARPGT-----PLH 298 H+L QHA FT +I+D VP+E +R L R A + A++ F DV + H Sbjct 257 HILQQHAASFTADVVIVDEHSVPNEADRTYLARAAANIGAKLAFHDVREEDSSGYYKSRH 316 Query 299 DPGKLAAVL 307 DP KLAA L Sbjct 317 DPKKLAAAL 325 Lambda K H 0.320 0.137 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 623720423336 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40