BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1423 Length=325 Score E Sequences producing significant alignments: (Bits) Value gi|15840880|ref|NP_335917.1| hypothetical protein MT1466 [Mycoba... 627 1e-177 gi|15608561|ref|NP_215939.1| transcriptional regulatory protein ... 626 1e-177 gi|294994985|ref|ZP_06800676.1| putative sporulation transcripti... 625 3e-177 gi|289574092|ref|ZP_06454319.1| transcriptional regulator whiA [... 625 4e-177 gi|339294401|gb|AEJ46512.1| hypothetical protein CCDC5079_1322 [... 624 6e-177 gi|183982243|ref|YP_001850534.1| transcriptional regulatory prot... 553 2e-155 gi|118617432|ref|YP_905764.1| transcriptional regulatory protein... 550 1e-154 gi|118467097|ref|YP_882539.1| hypothetical protein MAV_3357 [Myc... 550 1e-154 gi|41407247|ref|NP_960083.1| hypothetical protein MAP1149 [Mycob... 550 1e-154 gi|342858719|ref|ZP_08715374.1| putative sporulation transcripti... 549 2e-154 gi|240171793|ref|ZP_04750452.1| hypothetical protein MkanA1_2093... 548 4e-154 gi|296170709|ref|ZP_06852284.1| transcriptional regulatory prote... 548 5e-154 gi|15827216|ref|NP_301479.1| transcriptional regulator [Mycobact... 531 7e-149 gi|238055460|sp|A0QWV9.2|WHIA_MYCS2 RecName: Full=Putative sporu... 530 2e-148 gi|108799365|ref|YP_639562.1| hypothetical protein Mmcs_2398 [My... 529 2e-148 gi|145224294|ref|YP_001134972.1| hypothetical protein Mflv_3712 ... 526 1e-147 gi|120403684|ref|YP_953513.1| hypothetical protein Mvan_2700 [My... 526 2e-147 gi|333990919|ref|YP_004523533.1| transcriptional regulator [Myco... 525 5e-147 gi|118469694|ref|YP_887397.1| hypothetical protein MSMEG_3081 [M... 523 1e-146 gi|336441020|gb|AEI54735.1| hypothetical protein MAB2781c [Mycob... 522 3e-146 gi|336441018|gb|AEI54734.1| hypothetical protein MAB2781c [Mycob... 520 1e-145 gi|336441014|gb|AEI54732.1| hypothetical protein MAB2781c [Mycob... 520 1e-145 gi|169629865|ref|YP_001703514.1| hypothetical protein MAB_2781c ... 518 4e-145 gi|111024126|ref|YP_707098.1| hypothetical protein RHA1_ro07176 ... 503 2e-140 gi|312139601|ref|YP_004006937.1| hypothetical protein REQ_22000 ... 494 6e-138 gi|226306515|ref|YP_002766475.1| WhiA-like protein [Rhodococcus ... 493 2e-137 gi|54025561|ref|YP_119803.1| hypothetical protein nfa35910 [Noca... 492 3e-137 gi|333919555|ref|YP_004493136.1| putative sporulation transcript... 483 1e-134 gi|326382180|ref|ZP_08203872.1| putative sporulation transcripti... 482 3e-134 gi|343924579|ref|ZP_08764127.1| putative sporulation transcripti... 482 4e-134 gi|262202289|ref|YP_003273497.1| hypothetical protein Gbro_2362 ... 481 9e-134 gi|296140241|ref|YP_003647484.1| hypothetical protein Tpau_2542 ... 480 2e-133 gi|257055611|ref|YP_003133443.1| hypothetical protein Svir_15810... 477 9e-133 gi|116670632|ref|YP_831565.1| hypothetical protein Arth_2085 [Ar... 460 1e-127 gi|119964489|ref|YP_947830.1| hypothetical protein AAur_2086 [Ar... 458 5e-127 gi|258652977|ref|YP_003202133.1| hypothetical protein Namu_2799 ... 458 6e-127 gi|163841013|ref|YP_001625418.1| hypothetical protein RSal33209_... 456 3e-126 gi|325963188|ref|YP_004241094.1| hypothetical protein Asphe3_180... 455 5e-126 gi|331697223|ref|YP_004333462.1| sporulation transcription regul... 455 5e-126 gi|220912582|ref|YP_002487891.1| hypothetical protein Achl_1826 ... 452 2e-125 gi|324999177|ref|ZP_08120289.1| putative sporulation transcripti... 452 4e-125 gi|308177688|ref|YP_003917094.1| hypothetical protein AARI_19050... 450 1e-124 gi|302525896|ref|ZP_07278238.1| sporulation regulatory protein [... 445 5e-123 gi|256379210|ref|YP_003102870.1| hypothetical protein Amir_5203 ... 442 2e-122 gi|300784687|ref|YP_003764978.1| hypothetical protein AMED_2781 ... 442 5e-122 gi|134098711|ref|YP_001104372.1| sporulation regulatory protein ... 441 5e-122 gi|295395304|ref|ZP_06805508.1| transcriptional regulatory prote... 439 3e-121 gi|284990550|ref|YP_003409104.1| hypothetical protein Gobs_2045 ... 433 2e-119 gi|84496556|ref|ZP_00995410.1| putative sporulation regulatory p... 427 1e-117 gi|336117066|ref|YP_004571833.1| WhiA family regulatory protein ... 427 2e-117 >gi|15840880|ref|NP_335917.1| hypothetical protein MT1466 [Mycobacterium tuberculosis CDC1551] gi|253799527|ref|YP_003032528.1| hypothetical protein TBMG_02557 [Mycobacterium tuberculosis KZN 1435] gi|254231662|ref|ZP_04924989.1| transcriptional regulatory protein whiA [Mycobacterium tuberculosis C] 13 more sequence titles Length=327 Score = 627 bits (1616), Expect = 1e-177, Method: Compositional matrix adjust. Identities = 325/325 (100%), Positives = 325/325 (100%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI Sbjct 3 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS Sbjct 63 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD Sbjct 123 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKVDGIPDTESVVTPDLLEDA Sbjct 303 ADRKAKVDGIPDTESVVTPDLLEDA 327 >gi|15608561|ref|NP_215939.1| transcriptional regulatory protein WHIA [Mycobacterium tuberculosis H37Rv] gi|31792617|ref|NP_855110.1| transcriptional regulatory protein WHIA [Mycobacterium bovis AF2122/97] gi|121637353|ref|YP_977576.1| putative transcriptional regulatory protein whiA [Mycobacterium bovis BCG str. Pasteur 1173P2] 61 more sequence titles Length=325 Score = 626 bits (1615), Expect = 1e-177, Method: Compositional matrix adjust. Identities = 325/325 (100%), Positives = 325/325 (100%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI Sbjct 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS Sbjct 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD Sbjct 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKVDGIPDTESVVTPDLLEDA Sbjct 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 >gi|294994985|ref|ZP_06800676.1| putative sporulation transcription regulator whiA [Mycobacterium tuberculosis 210] Length=327 Score = 625 bits (1611), Expect = 3e-177, Method: Compositional matrix adjust. Identities = 324/325 (99%), Positives = 325/325 (100%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTTDVKD+LSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI Sbjct 3 MTTDVKDDLSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS Sbjct 63 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD Sbjct 123 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKVDGIPDTESVVTPDLLEDA Sbjct 303 ADRKAKVDGIPDTESVVTPDLLEDA 327 >gi|289574092|ref|ZP_06454319.1| transcriptional regulator whiA [Mycobacterium tuberculosis K85] gi|339631490|ref|YP_004723132.1| transcriptional regulator [Mycobacterium africanum GM041182] gi|289538523|gb|EFD43101.1| transcriptional regulator whiA [Mycobacterium tuberculosis K85] gi|339330846|emb|CCC26517.1| putative transcriptional regulatory protein WHIA [Mycobacterium africanum GM041182] Length=325 Score = 625 bits (1611), Expect = 4e-177, Method: Compositional matrix adjust. Identities = 324/325 (99%), Positives = 325/325 (100%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI Sbjct 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS Sbjct 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARR+GVGAKAREVRGAD Sbjct 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRIGVGAKAREVRGAD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKVDGIPDTESVVTPDLLEDA Sbjct 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 >gi|339294401|gb|AEJ46512.1| hypothetical protein CCDC5079_1322 [Mycobacterium tuberculosis CCDC5079] Length=327 Score = 624 bits (1609), Expect = 6e-177, Method: Compositional matrix adjust. Identities = 324/325 (99%), Positives = 324/325 (99%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI Sbjct 3 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS Sbjct 63 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGA RRLGVGAKAREVRGAD Sbjct 123 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAVRRLGVGAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKVDGIPDTESVVTPDLLEDA Sbjct 303 ADRKAKVDGIPDTESVVTPDLLEDA 327 >gi|183982243|ref|YP_001850534.1| transcriptional regulatory protein WhiA [Mycobacterium marinum M] gi|238055458|sp|B2HP75.1|WHIA_MYCMM RecName: Full=Putative sporulation transcription regulator whiA gi|183175569|gb|ACC40679.1| transcriptional regulatory protein WhiA [Mycobacterium marinum M] Length=325 Score = 553 bits (1424), Expect = 2e-155, Method: Compositional matrix adjust. Identities = 313/325 (97%), Positives = 322/325 (99%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTT+VKDELSRLVVKSVSARRAEVTSLLRFAGGLHIV GRVVVEAE+DLGSIARRLRK+I Sbjct 1 MTTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVAGRVVVEAEVDLGSIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+LYGY+AVVHVLSASGIRK+TRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS Sbjct 61 FDLYGYSAVVHVLSASGIRKNTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 I DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD Sbjct 121 IGDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKV+GIPDTES VTPDLLEDA Sbjct 301 ADRKAKVEGIPDTESAVTPDLLEDA 325 >gi|118617432|ref|YP_905764.1| transcriptional regulatory protein WhiA [Mycobacterium ulcerans Agy99] gi|238055444|sp|A0PPM4.1|WHIA_MYCUA RecName: Full=Putative sporulation transcription regulator whiA gi|118569542|gb|ABL04293.1| transcriptional regulatory protein WhiA [Mycobacterium ulcerans Agy99] Length=325 Score = 550 bits (1416), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 311/325 (96%), Positives = 320/325 (99%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTT+VKDELSRLVVKSVSARRAEVTSLLRFAGGLHIV GRVVVEAE+DLGSIARRLRK+I Sbjct 1 MTTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVAGRVVVEAEVDLGSIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+LYGY+AVVHVLSASGIRK+TRYVLRVANDGEALARQTGL DMRGRPVRGLPAQVVGGS Sbjct 61 FDLYGYSAVVHVLSASGIRKNTRYVLRVANDGEALARQTGLFDMRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 I DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD Sbjct 121 IGDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLASAGKLRVEHRQ SLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLASAGKLRVEHRQVSLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKV+GIPDTES VTPDLLEDA Sbjct 301 ADRKAKVEGIPDTESAVTPDLLEDA 325 >gi|118467097|ref|YP_882539.1| hypothetical protein MAV_3357 [Mycobacterium avium 104] gi|254775800|ref|ZP_05217316.1| hypothetical protein MaviaA2_14180 [Mycobacterium avium subsp. avium ATCC 25291] gi|118168384|gb|ABK69281.1| conserved hypothetical protein [Mycobacterium avium 104] Length=327 Score = 550 bits (1416), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 310/325 (96%), Positives = 320/325 (99%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTT+VKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAE+DLG++ARRLRK+I Sbjct 3 MTTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGNVARRLRKDI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGY AVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLD RGRPVRGLPAQVVGGS Sbjct 63 FELYGYNAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDNRGRPVRGLPAQVVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 I DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 123 IADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL+WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGEAIGALLTRMGAQDTRLIWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK++GIPDTES VTPDLLEDA Sbjct 303 ADRKAKIEGIPDTESAVTPDLLEDA 327 >gi|41407247|ref|NP_960083.1| hypothetical protein MAP1149 [Mycobacterium avium subsp. paratuberculosis K-10] gi|81414505|sp|Q741E2.1|WHIA_MYCPA RecName: Full=Putative sporulation transcription regulator whiA gi|238055459|sp|A0QI01.2|WHIA_MYCA1 RecName: Full=Putative sporulation transcription regulator whiA gi|41395598|gb|AAS03466.1| hypothetical protein MAP_1149 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461605|gb|EGO40470.1| hypothetical protein MAPs_28630 [Mycobacterium avium subsp. paratuberculosis S397] Length=325 Score = 550 bits (1416), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 310/325 (96%), Positives = 320/325 (99%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTT+VKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAE+DLG++ARRLRK+I Sbjct 1 MTTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGNVARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGY AVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLD RGRPVRGLPAQVVGGS Sbjct 61 FELYGYNAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDNRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 I DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 121 IADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGAD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL+WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLIWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK++GIPDTES VTPDLLEDA Sbjct 301 ADRKAKIEGIPDTESAVTPDLLEDA 325 >gi|342858719|ref|ZP_08715374.1| putative sporulation transcription regulator whiA [Mycobacterium colombiense CECT 3035] gi|342134423|gb|EGT87603.1| putative sporulation transcription regulator whiA [Mycobacterium colombiense CECT 3035] Length=325 Score = 549 bits (1414), Expect = 2e-154, Method: Compositional matrix adjust. Identities = 310/325 (96%), Positives = 320/325 (99%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTT+VKDELSRL+VKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAE+DLG++ARRLRK+I Sbjct 1 MTTEVKDELSRLIVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGNVARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGY AVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLD RGRPVRGLPAQVVGGS Sbjct 61 FELYGYNAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDNRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 121 VGDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGAD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKV+GIPDTES VTPDLLEDA Sbjct 301 ADRKAKVEGIPDTESAVTPDLLEDA 325 >gi|240171793|ref|ZP_04750452.1| hypothetical protein MkanA1_20935 [Mycobacterium kansasii ATCC 12478] Length=325 Score = 548 bits (1413), Expect = 4e-154, Method: Compositional matrix adjust. Identities = 310/325 (96%), Positives = 321/325 (99%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTT+VKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAE+DLGSIARRLRK+I Sbjct 1 MTTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGSIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGY AVVHVLSASGIRK+TRYVLRVANDGEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 FELYGYNAVVHVLSASGIRKNTRYVLRVANDGEALARQTGLLDVRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 121 VADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGAD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLA+AGKLRV+HRQASLEELGRLA+PPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLAAAGKLRVQHRQASLEELGRLAEPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKVDGIPDTES VTPDLLEDA Sbjct 301 ADRKAKVDGIPDTESAVTPDLLEDA 325 >gi|296170709|ref|ZP_06852284.1| transcriptional regulatory protein WhiA [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894698|gb|EFG74432.1| transcriptional regulatory protein WhiA [Mycobacterium parascrofulaceum ATCC BAA-614] Length=327 Score = 548 bits (1411), Expect = 5e-154, Method: Compositional matrix adjust. Identities = 308/325 (95%), Positives = 320/325 (99%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MTT+VKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAE+DLG++ARRLRK+I Sbjct 3 MTTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGNVARRLRKDI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGY AVVHVLSASGIRK+TRYVLRVANDGEALARQTGLLD RGRPVRGLPAQVVGGS Sbjct 63 FELYGYNAVVHVLSASGIRKTTRYVLRVANDGEALARQTGLLDNRGRPVRGLPAQVVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 123 VGDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL+WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGEAIGALLTRMGAQDTRLIWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK++GIPDTES VTPDLLEDA Sbjct 303 ADRKAKIEGIPDTESAVTPDLLEDA 327 >gi|15827216|ref|NP_301479.1| transcriptional regulator [Mycobacterium leprae TN] gi|221229694|ref|YP_002503110.1| putative transcriptional regulator [Mycobacterium leprae Br4923] gi|81537153|sp|Q9CCN8.1|WHIA_MYCLE RecName: Full=Putative sporulation transcription regulator whiA gi|238055457|sp|B8ZUN8.1|WHIA_MYCLB RecName: Full=Putative sporulation transcription regulator whiA gi|13092764|emb|CAC30073.1| putative transcriptional regulator [Mycobacterium leprae] gi|219932801|emb|CAR70658.1| putative transcriptional regulator [Mycobacterium leprae Br4923] Length=325 Score = 531 bits (1367), Expect = 7e-149, Method: Compositional matrix adjust. Identities = 299/325 (92%), Positives = 313/325 (97%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRL VKS+SARRAEVTSLLRFAGGLHIVGGRVV+EAE+DL +IARRLRK+I Sbjct 1 MTIEVKDELSRLAVKSISARRAEVTSLLRFAGGLHIVGGRVVIEAEVDLENIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+LYGY AVVHVLSASGIRKS RYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS Sbjct 61 FDLYGYNAVVHVLSASGIRKSVRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEA WRGAFLAHGSLTEPGRSSALEVSCPG EAALALVGAAR+LGV AKAREVRGAD Sbjct 121 LIDAEAVWRGAFLAHGSLTEPGRSSALEVSCPGLEAALALVGAARKLGVNAKAREVRGAD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIG LLTRMGAQDTRLVWEERR+RREVRATANRLANFDDANLRRSARAA+AA Sbjct 181 RVVVRDGEAIGVLLTRMGAQDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAIAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AAR ERALEILGDTVP+HLASAGKLRVE+RQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARAERALEILGDTVPDHLASAGKLRVEYRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAKV+GIPDTES VTPDLLEDA Sbjct 301 ADRKAKVEGIPDTESAVTPDLLEDA 325 >gi|238055460|sp|A0QWV9.2|WHIA_MYCS2 RecName: Full=Putative sporulation transcription regulator whiA Length=325 Score = 530 bits (1364), Expect = 2e-148, Method: Compositional matrix adjust. Identities = 299/325 (92%), Positives = 314/325 (97%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV SVSARRAEV SLLRFAGGLHIV GRVVVEAE+DLG IARRLRK+I Sbjct 1 MTAEVKDELSRLVVNSVSARRAEVASLLRFAGGLHIVAGRVVVEAEVDLGIIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ++LYGY AVVHVLSASGIRK+TRYV+RVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS Sbjct 61 YDLYGYNAVVHVLSASGIRKNTRYVVRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRG+D Sbjct 121 VGDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGD+VP+HLA+AGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDSVPDHLAAAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK +GIPDTES VTPDLL+DA Sbjct 301 ADRKAKQEGIPDTESAVTPDLLDDA 325 >gi|108799365|ref|YP_639562.1| hypothetical protein Mmcs_2398 [Mycobacterium sp. MCS] gi|119868481|ref|YP_938433.1| hypothetical protein Mkms_2445 [Mycobacterium sp. KMS] gi|126435023|ref|YP_001070714.1| hypothetical protein Mjls_2439 [Mycobacterium sp. JLS] 6 more sequence titles Length=325 Score = 529 bits (1363), Expect = 2e-148, Method: Compositional matrix adjust. Identities = 300/325 (93%), Positives = 312/325 (96%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV SVSARRAEV SLLRFAGGLHIV GRVVVEAE+DLG IARRLRK+I Sbjct 1 MTAEVKDELSRLVVNSVSARRAEVASLLRFAGGLHIVSGRVVVEAEVDLGIIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ++LYGY AVVH+LSASGIRK TRYV+RVA DGEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 YDLYGYNAVVHMLSASGIRKGTRYVVRVAKDGEALARQTGLLDLRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRG+D Sbjct 121 VADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK DGIPDTES VTPDLLEDA Sbjct 301 ADRKAKQDGIPDTESAVTPDLLEDA 325 >gi|145224294|ref|YP_001134972.1| hypothetical protein Mflv_3712 [Mycobacterium gilvum PYR-GCK] gi|315444627|ref|YP_004077506.1| hypothetical protein Mspyr1_30540 [Mycobacterium sp. Spyr1] gi|238055456|sp|A4TC18.1|WHIA_MYCGI RecName: Full=Putative sporulation transcription regulator whiA gi|145216780|gb|ABP46184.1| protein of unknown function DUF199 [Mycobacterium gilvum PYR-GCK] gi|315262930|gb|ADT99671.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length=325 Score = 526 bits (1356), Expect = 1e-147, Method: Compositional matrix adjust. Identities = 299/325 (92%), Positives = 312/325 (96%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV SVSARRAEV SLLRFAGGLHIV GRVVVEAE+DLG IARRLRK+I Sbjct 1 MTAEVKDELSRLVVNSVSARRAEVASLLRFAGGLHIVSGRVVVEAEVDLGIIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ++LYGY+AVVHVLSASGIRKSTRYV+RVA DGEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 YDLYGYSAVVHVLSASGIRKSTRYVVRVAKDGEALARQTGLLDLRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRG+D Sbjct 121 VADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLA+AG LRV HRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLAAAGTLRVAHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK DGIPDTES VTPDLLEDA Sbjct 301 ADRKAKQDGIPDTESAVTPDLLEDA 325 >gi|120403684|ref|YP_953513.1| hypothetical protein Mvan_2700 [Mycobacterium vanbaalenii PYR-1] gi|238055445|sp|A1T8K7.1|WHIA_MYCVP RecName: Full=Putative sporulation transcription regulator whiA gi|119956502|gb|ABM13507.1| protein of unknown function DUF199 [Mycobacterium vanbaalenii PYR-1] Length=325 Score = 526 bits (1355), Expect = 2e-147, Method: Compositional matrix adjust. Identities = 298/325 (92%), Positives = 311/325 (96%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV SVSARRAEV SLLRFAGGLHIV GRVVVEAE+DLG IARRLRK+I Sbjct 1 MTAEVKDELSRLVVNSVSARRAEVASLLRFAGGLHIVSGRVVVEAEVDLGIIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ++LYGY AVVHVLSASGIRKSTRYV+RVA DGEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 YDLYGYNAVVHVLSASGIRKSTRYVVRVAKDGEALARQTGLLDLRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRG+D Sbjct 121 VGDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERAL+ILGDTVP+HLA+AG LRV HRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALQILGDTVPDHLAAAGNLRVAHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK DGIPDTES VTPDLLEDA Sbjct 301 ADRKAKQDGIPDTESAVTPDLLEDA 325 >gi|333990919|ref|YP_004523533.1| transcriptional regulator [Mycobacterium sp. JDM601] gi|333486887|gb|AEF36279.1| transcriptional regulatory protein WhiA [Mycobacterium sp. JDM601] Length=327 Score = 525 bits (1351), Expect = 5e-147, Method: Compositional matrix adjust. Identities = 296/325 (92%), Positives = 313/325 (97%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV SV+ARRAEV +LLRFAGGLHIV GRVVVEAE+DLG IARRLRK+I Sbjct 3 MTAEVKDELSRLVVSSVTARRAEVAALLRFAGGLHIVAGRVVVEAEVDLGVIARRLRKDI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+LYGY+A+VHVL+ASG+RK+TRYVLRV DGEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 63 FDLYGYSAIVHVLTASGMRKNTRYVLRVTKDGEALARQTGLLDLRGRPVRGLPAQVVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEV CPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 123 VADAEAAWRGAFLAHGSLTEPGRSSALEVGCPGPEAALALVGAARRLGVSAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGEAIGALLTRMGAQDTRLVWEERRIRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERAL+ILGDTVPEHLASAG+LRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALDILGDTVPEHLASAGRLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK DGIPDTES VTP+LLEDA Sbjct 303 ADRKAKQDGIPDTESAVTPELLEDA 327 >gi|118469694|ref|YP_887397.1| hypothetical protein MSMEG_3081 [Mycobacterium smegmatis str. MC2 155] gi|118170981|gb|ABK71877.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=321 Score = 523 bits (1348), Expect = 1e-146, Method: Compositional matrix adjust. Identities = 296/321 (93%), Positives = 311/321 (97%), Gaps = 0/321 (0%) Query 5 VKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEIFELY 64 +KDELSRLVV SVSARRAEV SLLRFAGGLHIV GRVVVEAE+DLG IARRLRK+I++LY Sbjct 1 MKDELSRLVVNSVSARRAEVASLLRFAGGLHIVAGRVVVEAEVDLGIIARRLRKDIYDLY 60 Query 65 GYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGSIDDA 124 GY AVVHVLSASGIRK+TRYV+RVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS+ DA Sbjct 61 GYNAVVHVLSASGIRKNTRYVVRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGSVGDA 120 Query 125 EAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGADRVVV 184 EAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRG+DRVVV Sbjct 121 EAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSDRVVV 180 Query 185 RDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAAAARV 244 RDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAAAARV Sbjct 181 RDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAAAARV 240 Query 245 ERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRK 304 ERALEILGD+VP+HLA+AGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRK Sbjct 241 ERALEILGDSVPDHLAAAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRK 300 Query 305 AKVDGIPDTESVVTPDLLEDA 325 AK +GIPDTES VTPDLL+DA Sbjct 301 AKQEGIPDTESAVTPDLLDDA 321 >gi|336441020|gb|AEI54735.1| hypothetical protein MAB2781c [Mycobacterium immunogenum] Length=325 Score = 522 bits (1344), Expect = 3e-146, Method: Compositional matrix adjust. Identities = 296/325 (92%), Positives = 310/325 (96%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV VS+RRAEV SLLRFAGGLHIV GRVVVEAE+D GSIARRLRK+I Sbjct 1 MTAEVKDELSRLVVTQVSSRRAEVASLLRFAGGLHIVSGRVVVEAEVDQGSIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+LYGY AVVHVLSA GIRK+TRYV+RVA DGEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 FDLYGYNAVVHVLSAGGIRKTTRYVVRVAKDGEALARQTGLLDLRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRG+D Sbjct 121 VADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLA+AGKLRVEHRQASLEELGRLADP MTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLAAAGKLRVEHRQASLEELGRLADPVMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK DGIPDTES VTP+LLEDA Sbjct 301 ADRKAKTDGIPDTESAVTPELLEDA 325 >gi|336441018|gb|AEI54734.1| hypothetical protein MAB2781c [Mycobacterium chelonae] Length=325 Score = 520 bits (1339), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 295/325 (91%), Positives = 310/325 (96%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV VS+RRAEV SLLRFAGGLHIV GRVVVEAE+D GSIARRLRK+I Sbjct 1 MTAEVKDELSRLVVTQVSSRRAEVASLLRFAGGLHIVSGRVVVEAEVDQGSIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+LYGY AVVHVLSA GIRK+TRYV+RVA DGEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 FDLYGYNAVVHVLSAGGIRKTTRYVVRVAKDGEALARQTGLLDLRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRG+D Sbjct 121 VADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLA+AGKLRVEHRQASLEELGRLADP MTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLAAAGKLRVEHRQASLEELGRLADPVMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK DGIPDTES VTP+LLE+A Sbjct 301 ADRKAKTDGIPDTESAVTPELLEEA 325 >gi|336441014|gb|AEI54732.1| hypothetical protein MAB2781c [Mycobacterium franklinii] Length=325 Score = 520 bits (1339), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 295/325 (91%), Positives = 310/325 (96%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV VS+RRAEV SLLRFAGGLHIV GRVVVEAE+D GSIARRLRK+I Sbjct 1 MTAEVKDELSRLVVTQVSSRRAEVASLLRFAGGLHIVSGRVVVEAEVDQGSIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+LYGY AVVHVLSA GIRK+TRYV+RVA DGEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 FDLYGYNAVVHVLSAGGIRKTTRYVVRVAKDGEALARQTGLLDLRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRG+D Sbjct 121 VADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLA+AGKLRVEHRQASLEELGRLA+P MTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLAAAGKLRVEHRQASLEELGRLAEPVMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK DGIPDTES VTP+LLEDA Sbjct 301 ADRKAKTDGIPDTESAVTPELLEDA 325 >gi|169629865|ref|YP_001703514.1| hypothetical protein MAB_2781c [Mycobacterium abscessus ATCC 19977] gi|238055454|sp|B1MC89.1|WHIA_MYCA9 RecName: Full=Putative sporulation transcription regulator whiA gi|169241832|emb|CAM62860.1| Conserved hypothetical protein [Mycobacterium abscessus] gi|336441012|gb|AEI54731.1| hypothetical protein MAB2781c [Mycobacterium abscessus] gi|336441016|gb|AEI54733.1| hypothetical protein MAB2781c [Mycobacterium bolletii] gi|336441022|gb|AEI54736.1| hypothetical protein MAB2781c [Mycobacterium massiliense] Length=325 Score = 518 bits (1334), Expect = 4e-145, Method: Compositional matrix adjust. Identities = 294/325 (91%), Positives = 310/325 (96%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV VS+RRAEV SLLRFAGGLHIV GRVVVEAE+D GSIARRLRK+I Sbjct 1 MTAEVKDELSRLVVTQVSSRRAEVASLLRFAGGLHIVSGRVVVEAEVDQGSIARRLRKDI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+LYGY AVVHVLSA GIRK+TRYV+RVA DGEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 FDLYGYNAVVHVLSAGGIRKTTRYVVRVAKDGEALARQTGLLDLRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRG+D Sbjct 121 VADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGDTVP+HLA+AGKLRVEHRQASLEELGRLADP MTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDTVPDHLAAAGKLRVEHRQASLEELGRLADPVMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK +GIPDTES VTP+LLE+A Sbjct 301 ADRKAKTEGIPDTESAVTPELLEEA 325 >gi|111024126|ref|YP_707098.1| hypothetical protein RHA1_ro07176 [Rhodococcus jostii RHA1] gi|226366366|ref|YP_002784149.1| WhiA-like protein [Rhodococcus opacus B4] gi|123144020|sp|Q0S0J6.1|WHIA_RHOSR RecName: Full=Putative sporulation transcription regulator whiA gi|254799308|sp|C1B4L5.1|WHIA_RHOOB RecName: Full=Putative sporulation transcription regulator whiA gi|110823656|gb|ABG98940.1| conserved hypothetical protein [Rhodococcus jostii RHA1] gi|226244856|dbj|BAH55204.1| WhiA-like protein [Rhodococcus opacus B4] Length=325 Score = 503 bits (1295), Expect = 2e-140, Method: Compositional matrix adjust. Identities = 284/325 (88%), Positives = 307/325 (95%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV VS R+AEV+SLLRFAGGLHIVGGRVVVEAE+DLGS ARRLR+EI Sbjct 1 MTAEVKDELSRLVVTHVSCRKAEVSSLLRFAGGLHIVGGRVVVEAEVDLGSTARRLRREI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+L+ Y+A VHVLSA G+RKS+RY++RVA +GEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 FDLFTYSADVHVLSAGGLRKSSRYIVRVAKEGEALARQTGLLDLRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLG+ AKAREVRG D Sbjct 121 VADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGISAKAREVRGTD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDGEAIGALLTRMGAQDTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVIRDGEAIGALLTRMGAQDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERAL+ILGD VP+HLA+AG LRVEHRQASLEELG+LADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALDILGDEVPDHLAAAGHLRVEHRQASLEELGQLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK GIPDTES VT DLL+DA Sbjct 301 ADRKAKETGIPDTESAVTADLLDDA 325 >gi|312139601|ref|YP_004006937.1| hypothetical protein REQ_22000 [Rhodococcus equi 103S] gi|325676724|ref|ZP_08156398.1| transcriptional regulatory protein WhiA [Rhodococcus equi ATCC 33707] gi|311888940|emb|CBH48253.1| conserved hypothetical protein [Rhodococcus equi 103S] gi|325552506|gb|EGD22194.1| transcriptional regulatory protein WhiA [Rhodococcus equi ATCC 33707] Length=327 Score = 494 bits (1273), Expect = 6e-138, Method: Compositional matrix adjust. Identities = 280/325 (87%), Positives = 303/325 (94%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRL V VS R+AEV++LLRFAGGLHIVGGRVVVEAE+DLGS ARRLR EI Sbjct 3 MTAEVKDELSRLTVTQVSCRKAEVSALLRFAGGLHIVGGRVVVEAEVDLGSTARRLRGEI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 +LYGY + VHVLSA G+RKS+RYV+RVA DGEALAR+TGLLDMRGRPVRGLPAQVVGGS Sbjct 63 LDLYGYQSDVHVLSAGGLRKSSRYVVRVAKDGEALARRTGLLDMRGRPVRGLPAQVVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALE+SCPGPEAALALVGAARRLG+ AKAREVRG D Sbjct 123 VGDAEAAWRGAFLAHGSLTEPGRSSALEISCPGPEAALALVGAARRLGIAAKAREVRGTD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILG+ VP+HLA+AG LR +HRQASLEELG+LADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALEILGEDVPDHLAAAGTLRAKHRQASLEELGQLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADRKAK G+PDTES VTP+LLE+A Sbjct 303 ADRKAKDLGLPDTESAVTPELLEEA 327 >gi|226306515|ref|YP_002766475.1| WhiA-like protein [Rhodococcus erythropolis PR4] gi|229493443|ref|ZP_04387228.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|226185632|dbj|BAH33736.1| WhiA-like protein [Rhodococcus erythropolis PR4] gi|229319404|gb|EEN85240.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=327 Score = 493 bits (1268), Expect = 2e-137, Method: Compositional matrix adjust. Identities = 279/324 (87%), Positives = 303/324 (94%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRLVV VS R+AEV++LLRFAGGLHIVGGRVVVEAE+DLGS ARRLR+EI Sbjct 3 MTAEVKDELSRLVVTQVSCRKAEVSALLRFAGGLHIVGGRVVVEAEVDLGSTARRLRREI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+L+ Y+A VHVLSA G+RKS RY++RVA +GEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 63 FDLFTYSADVHVLSAGGLRKSARYIVRVAKEGEALARQTGLLDLRGRPVRGLPAQVVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLG+ AKAREVRG D Sbjct 123 VGDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGISAKAREVRGTD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDGEAIG LLTRMGAQDTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVIRDGEAIGDLLTRMGAQDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILG+ VP+HLA+AG LRVEHRQASLEELG+LADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALEILGEDVPDHLAAAGALRVEHRQASLEELGQLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 ADRKAK GIPDTES V +LLE+ Sbjct 303 ADRKAKETGIPDTESAVNVELLEE 326 >gi|54025561|ref|YP_119803.1| hypothetical protein nfa35910 [Nocardia farcinica IFM 10152] gi|81374330|sp|Q5YTQ2.1|WHIA_NOCFA RecName: Full=Putative sporulation transcription regulator whiA gi|54017069|dbj|BAD58439.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=325 Score = 492 bits (1267), Expect = 3e-137, Method: Compositional matrix adjust. Identities = 277/325 (86%), Positives = 307/325 (95%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRL V VS+R+AE+++LLRFAGGLHIVGGRV+VEAE+D+GSIARRLR+EI Sbjct 1 MTAEVKDELSRLTVSQVSSRKAELSALLRFAGGLHIVGGRVIVEAEVDMGSIARRLRREI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 FELYGY + VHVL A G+RK++RYV+RV+ +GEALARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 FELYGYGSDVHVLGAGGLRKTSRYVVRVSKEGEALARQTGLLDVRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 I DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLG+ AKAREVRG D Sbjct 121 IADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGITAKAREVRGTD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGAQDTRL WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILG+ VP+HLA+AGKLRV+HRQASLEELG+LADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGEDVPDHLAAAGKLRVQHRQASLEELGQLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADR+A+ GIPDTES VT +LL++A Sbjct 301 ADRRARELGIPDTESAVTAELLDEA 325 >gi|333919555|ref|YP_004493136.1| putative sporulation transcription regulator whiA [Amycolicicoccus subflavus DQS3-9A1] gi|333481776|gb|AEF40336.1| Putative sporulation transcription regulator whiA [Amycolicicoccus subflavus DQS3-9A1] Length=327 Score = 483 bits (1244), Expect = 1e-134, Method: Compositional matrix adjust. Identities = 269/325 (83%), Positives = 305/325 (94%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT +VKDELSRL V VSAR+AEV+SLLRF+GGLHIV GRVVVEA++D+GSIARRLR+EI Sbjct 3 MTAEVKDELSRLSVTQVSARKAEVSSLLRFSGGLHIVAGRVVVEADVDMGSIARRLRREI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 +LYGY A +HV+ ASG+RKSTRY++RVA DGEALARQTGLLD+RGRPVRGLPA VVGG Sbjct 63 HDLYGYNADIHVVGASGLRKSTRYLVRVAKDGEALARQTGLLDLRGRPVRGLPAHVVGGG 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 I D+EAAWRGAFLAHGSLTEPGRS+ALEV CPGPEAA+ALVGAARR+G+ AKAREVRGAD Sbjct 123 IQDSEAAWRGAFLAHGSLTEPGRSAALEVGCPGPEAAMALVGAARRMGIAAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDG+AIGALLTRMGAQDTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGDAIGALLTRMGAQDTRLVWEERRIRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AA+VERALEILGD PEHLA+AG+LR++HRQ+SLEELG+LADPP+TKDAVAGRIRRLLSM Sbjct 243 AAKVERALEILGDEAPEHLAAAGRLRIKHRQSSLEELGQLADPPLTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 ADR+A+ GIPDT+S VTP+LL++A Sbjct 303 ADRRARELGIPDTDSAVTPELLDEA 327 >gi|326382180|ref|ZP_08203872.1| putative sporulation transcription regulator whiA [Gordonia neofelifaecis NRRL B-59395] gi|326198910|gb|EGD56092.1| putative sporulation transcription regulator whiA [Gordonia neofelifaecis NRRL B-59395] Length=325 Score = 482 bits (1241), Expect = 3e-134, Method: Compositional matrix adjust. Identities = 272/325 (84%), Positives = 299/325 (92%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSRL V +S R+AEV++LLRFAGG+HIV GRVVVEAE+DLG++ARRLR EI Sbjct 1 MTGAVKDELSRLSVTQISCRKAEVSALLRFAGGIHIVSGRVVVEAEVDLGNVARRLRYEI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 L+GY A VHVL + G+RK RY++RV DGEALARQTGLLDMRGRPVRGLPAQVVGGS Sbjct 61 HGLFGYNAEVHVLRSGGMRKGARYIVRVTKDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 I DAEAAWRGAFLAHGSLTEPGRSS+LEVSCPGPEAALALVGAARRLG+ AKAREVRG+D Sbjct 121 IGDAEAAWRGAFLAHGSLTEPGRSSSLEVSCPGPEAALALVGAARRLGISAKAREVRGSD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDGEAIGALLTRMGA DTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVIRDGEAIGALLTRMGAHDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGD VP+HL SAG+LRVEHRQASLEELG+LADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDDVPDHLLSAGRLRVEHRQASLEELGQLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 AD++A+ DGIPDTES VT +LL++A Sbjct 301 ADKRARTDGIPDTESAVTAELLDEA 325 >gi|343924579|ref|ZP_08764127.1| putative sporulation transcription regulator WhiA [Gordonia alkanivorans NBRC 16433] gi|343765514|dbj|GAA11053.1| putative sporulation transcription regulator WhiA [Gordonia alkanivorans NBRC 16433] Length=325 Score = 482 bits (1240), Expect = 4e-134, Method: Compositional matrix adjust. Identities = 271/325 (84%), Positives = 300/325 (93%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSRL V VS RRAEV++LLRFAGGLHIV GRVVVEAE+D+G++ARRLR+EI Sbjct 1 MTAAVKDELSRLTVTQVSCRRAEVSALLRFAGGLHIVAGRVVVEAEVDMGNVARRLRREI 60 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 +L+GY + VHVL + G+RKS RY++R+ DGE LARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 61 HDLFGYGSDVHVLRSGGLRKSARYIVRITKDGEGLARQTGLLDLRGRPVRGLPAQVVGGS 120 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 121 VADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVTAKAREVRGAD 180 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDGEAIGALLTRMGA DTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 181 RVVIRDGEAIGALLTRMGAHDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 240 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGD VP+HL +AG+LR+ HRQASLEELG+LADPPMTKDAVAGRIRRLLSM Sbjct 241 AARVERALEILGDEVPDHLIAAGQLRITHRQASLEELGQLADPPMTKDAVAGRIRRLLSM 300 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 AD+KA+ DGIPDTES VT +LL++A Sbjct 301 ADKKARQDGIPDTESAVTSELLDEA 325 >gi|262202289|ref|YP_003273497.1| hypothetical protein Gbro_2362 [Gordonia bronchialis DSM 43247] gi|262085636|gb|ACY21604.1| protein of unknown function DUF199 [Gordonia bronchialis DSM 43247] Length=327 Score = 481 bits (1237), Expect = 9e-134, Method: Compositional matrix adjust. Identities = 270/324 (84%), Positives = 300/324 (93%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSRL V VS+R+AEV++LLRFAGGLHIV GRVVVEAE+D+G++ARRLR+EI Sbjct 3 MTAAVKDELSRLGVTQVSSRKAEVSALLRFAGGLHIVAGRVVVEAEVDMGNVARRLRREI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 F+LYGY VHVL G+R+S RY++RV DGE+LARQTGLLD+RGRPVRGLPAQVVGGS Sbjct 63 FDLYGYNPDVHVLRGGGLRRSARYIVRVTKDGESLARQTGLLDLRGRPVRGLPAQVVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 123 VGDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVAAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDGEAIGALLTRMGA DTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVIRDGEAIGALLTRMGAHDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILGD VP+HL +AG+LR+ HRQASLEELG+LADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALEILGDEVPDHLMAAGQLRITHRQASLEELGQLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 AD+KA+V+G+ DTES VT DLL++ Sbjct 303 ADKKARVEGLADTESAVTSDLLDE 326 >gi|296140241|ref|YP_003647484.1| hypothetical protein Tpau_2542 [Tsukamurella paurometabola DSM 20162] gi|296028375|gb|ADG79145.1| protein of unknown function DUF199 [Tsukamurella paurometabola DSM 20162] Length=328 Score = 480 bits (1235), Expect = 2e-133, Method: Compositional matrix adjust. Identities = 269/324 (84%), Positives = 294/324 (91%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 +T+ VKDELSRL + VS RRAEV SLLRFAGGLHI GGRV+VEAE+D+G IARRLRKEI Sbjct 3 LTSQVKDELSRLSITQVSCRRAEVASLLRFAGGLHIQGGRVIVEAEVDMGIIARRLRKEI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 +LYGY + VHVLSA G+RK+ RY++RV DGEALARQTGLLDMRGRPV GLP+ +VGGS Sbjct 63 LDLYGYNSDVHVLSAGGLRKAARYIVRVVKDGEALARQTGLLDMRGRPVVGLPSHIVGGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + D+EAAWRGAFLAHGSLTEPGRSSALEVSCPGPE ALALVG ARRLGV AKAREVRGAD Sbjct 123 VGDSEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEVALALVGCARRLGVTAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDGEAIGALLTRMGA DTRLVWEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGEAIGALLTRMGANDTRLVWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALEILG VP+HLA AG LRV+HRQASLEELG+LADPPMTKDAVAGRIRRLLSM Sbjct 243 AARVERALEILGPDVPDHLAQAGSLRVQHRQASLEELGQLADPPMTKDAVAGRIRRLLSM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 AD++A DG+PDTES VT D+L+D Sbjct 303 ADKRAAADGVPDTESAVTADMLDD 326 >gi|257055611|ref|YP_003133443.1| hypothetical protein Svir_15810 [Saccharomonospora viridis DSM 43017] gi|256585483|gb|ACU96616.1| conserved hypothetical protein [Saccharomonospora viridis DSM 43017] Length=328 Score = 477 bits (1228), Expect = 9e-133, Method: Compositional matrix adjust. Identities = 256/325 (79%), Positives = 293/325 (91%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSR+ V + RR+EV++LLRFAGGLHIVGGRVVVEAELD GS+ARRLRKEI Sbjct 3 MTAAVKDELSRVEVTKIGPRRSEVSALLRFAGGLHIVGGRVVVEAELDTGSVARRLRKEI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ELYG+ VHV+++SG+RK TRYV+RV DGE LARQTGL+D RGRPVRGLPA VV G Sbjct 63 HELYGHLPEVHVITSSGLRKGTRYVIRVVKDGEGLARQTGLIDQRGRPVRGLPASVVSGG 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSS+LEV+CPGPEAALALVGAARR+G+ AK+REVRGAD Sbjct 123 VADAEAAWRGAFLAHGSLTEPGRSSSLEVTCPGPEAALALVGAARRMGIQAKSREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDG+AIGALLTR+GA + L WEE+RLRREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGDAIGALLTRLGAHSSVLAWEEQRLRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERA+EILGDT PEHL +AGKLR+ +RQASLEELG+LADPPMTKDAVAGRIRRLL++ Sbjct 243 AARVERAIEILGDTAPEHLLAAGKLRLANRQASLEELGQLADPPMTKDAVAGRIRRLLAL 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 AD++AK G+PDTES VTP++LE++ Sbjct 303 ADKRAKELGVPDTESAVTPEMLEES 327 >gi|116670632|ref|YP_831565.1| hypothetical protein Arth_2085 [Arthrobacter sp. FB24] gi|238055395|sp|A0JWP5.1|WHIA_ARTS2 RecName: Full=Putative sporulation transcription regulator whiA gi|116610741|gb|ABK03465.1| protein of unknown function DUF199 [Arthrobacter sp. FB24] Length=326 Score = 460 bits (1183), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 236/324 (73%), Positives = 281/324 (87%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 +T+ VK+ELSRL +K S R+AEV+++LRFAGGLHI+ GR+V+EAE+DL S ARRLR I Sbjct 3 LTSSVKEELSRLDIKKSSVRKAEVSAMLRFAGGLHIISGRIVIEAEVDLASTARRLRAAI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 E+YG+ + + V+S G+R+ RYV+RV DGEALARQTGLLD RGRPVRGLP+ VV GS Sbjct 63 AEVYGHQSEIIVVSGGGLRRGNRYVVRVVRDGEALARQTGLLDARGRPVRGLPSAVVNGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 DAEA WRGAFLAHGSLTEPGRSSA+EV+CPGPE+ALALVGAARRLG+ AKAREVRG D Sbjct 123 AADAEAVWRGAFLAHGSLTEPGRSSAMEVTCPGPESALALVGAARRLGIQAKAREVRGVD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDG+ I ALLTRMGA D +VWEERR+R+EVRATANRLANFDDANLRRSA+AAVAA Sbjct 183 RVVIRDGDTIAALLTRMGAHDALMVWEERRMRKEVRATANRLANFDDANLRRSAQAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 ARV+RALEILGD VP+HL AG+LRV H+QASL+ELGRLADPPMTKDA+AGRIRRLL+M Sbjct 243 GARVDRALEILGDDVPDHLKYAGELRVAHKQASLDELGRLADPPMTKDAIAGRIRRLLAM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 AD++A GIP TE+ VTP++L++ Sbjct 303 ADKRALDLGIPGTEANVTPEMLDE 326 >gi|119964489|ref|YP_947830.1| hypothetical protein AAur_2086 [Arthrobacter aurescens TC1] gi|238055393|sp|A1R6G8.1|WHIA_ARTAT RecName: Full=Putative sporulation transcription regulator whiA gi|119951348|gb|ABM10259.1| conserved hypothetical protein [Arthrobacter aurescens TC1] Length=326 Score = 458 bits (1179), Expect = 5e-127, Method: Compositional matrix adjust. Identities = 235/324 (73%), Positives = 280/324 (87%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 +T VKDELSRL +K S R+AEV+++LRFAGGLHI+ GR+V+EAE+DL S ARRLR I Sbjct 3 LTASVKDELSRLDIKKSSVRKAEVSAMLRFAGGLHIISGRIVIEAEVDLASTARRLRAAI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 E+YG+ + + V+S G+R+ +RYV+RV DGEALARQTGLLD RGRPVRGLP+ VV GS Sbjct 63 AEVYGHQSEIIVVSGGGLRRGSRYVVRVVRDGEALARQTGLLDGRGRPVRGLPSAVVNGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 DAEA WRGAFLAHGSLTEPGRSS+LEV+CPGPE+ALALVGAARRLG+ AKAREVRG D Sbjct 123 AADAEAVWRGAFLAHGSLTEPGRSSSLEVTCPGPESALALVGAARRLGIQAKAREVRGVD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDG+ I LLTRMGA D +VWEERR+R+EVRATANRLANFDDANLRRSA+AAVAA Sbjct 183 RVVIRDGDTIATLLTRMGAHDALMVWEERRMRKEVRATANRLANFDDANLRRSAQAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 ARV+RALEILGD VP+HL AG+LRV H+QASL+ELGRLADPPMTKDA+AGRIRRLL+M Sbjct 243 GARVDRALEILGDDVPDHLKYAGELRVAHKQASLDELGRLADPPMTKDAIAGRIRRLLAM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 AD++A GIP TE+ VTP+++++ Sbjct 303 ADKRALDLGIPGTEANVTPEMMDE 326 >gi|258652977|ref|YP_003202133.1| hypothetical protein Namu_2799 [Nakamurella multipartita DSM 44233] gi|258556202|gb|ACV79144.1| protein of unknown function DUF199 [Nakamurella multipartita DSM 44233] Length=326 Score = 458 bits (1178), Expect = 6e-127, Method: Compositional matrix adjust. Identities = 252/323 (79%), Positives = 291/323 (91%), Gaps = 0/323 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSR+VV VSAR++EV++LLRFAGGLHIV GRV+VEAELD G++ARRLRKEI Sbjct 3 MTASVKDELSRVVVSKVSARKSEVSALLRFAGGLHIVAGRVIVEAELDTGAVARRLRKEI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ELYG+ A V VL+ASGIRKSTRYV+RV G++LARQTGL+D RGRPVRGLP Q+V GS Sbjct 63 AELYGHAAEVQVLAASGIRKSTRYVVRVVGGGDSLARQTGLIDQRGRPVRGLPPQIVAGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRS++LE++CPGPEAALALVGAARR+G+GAKAREVRGAD Sbjct 123 VGDAEAAWRGAFLAHGSLTEPGRSASLEITCPGPEAALALVGAARRMGIGAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RV+VRDG+AI ALLTR+GA + + WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVLVRDGDAIAALLTRLGAHSSMMAWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 +ARVERALEILG+ P+HL+ AG+LR+ H QASLEELG+LADPPMTKDAVAGRIRRLL+M Sbjct 243 SARVERALEILGEDAPDHLSQAGRLRIAHGQASLEELGQLADPPMTKDAVAGRIRRLLTM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLE 323 ADR+A GIPDTES VT D+L+ Sbjct 303 ADRRAAELGIPDTESAVTADMLD 325 >gi|163841013|ref|YP_001625418.1| hypothetical protein RSal33209_2273 [Renibacterium salmoninarum ATCC 33209] gi|238055449|sp|A9WT66.1|WHIA_RENSM RecName: Full=Putative sporulation transcription regulator whiA gi|162954489|gb|ABY24004.1| conserved hypothetical protein [Renibacterium salmoninarum ATCC 33209] Length=326 Score = 456 bits (1172), Expect = 3e-126, Method: Compositional matrix adjust. Identities = 235/324 (73%), Positives = 280/324 (87%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 +T VK+ELSRL V+ S R+AEV+++LRFAGGLHI+ GR+V+EAE+DL + ARR+R I Sbjct 3 LTAAVKEELSRLEVRKSSVRKAEVSAMLRFAGGLHIISGRIVIEAEVDLAATARRVRVAI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ELYG+ + + V+S G+R+ RYV+RV +GEALARQTGLLD RGRPVRGLP+ VV GS Sbjct 63 AELYGHQSEIIVVSGGGLRRGNRYVVRVVREGEALARQTGLLDSRGRPVRGLPSVVVNGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 DAEA WRGAFLAHGSLTEPGRSS++EV+CPGPEAALALVG+ARRLG+ AKAREVRG D Sbjct 123 TADAEAVWRGAFLAHGSLTEPGRSSSMEVTCPGPEAALALVGSARRLGIAAKAREVRGVD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDG+ I ALLTRMGA +T LVWEERR+R+EVRATANRLANFDDANLRRSA+AAVAA Sbjct 183 RVVIRDGDTIAALLTRMGAHETLLVWEERRMRKEVRATANRLANFDDANLRRSAQAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 ARV+RALEILGD VPEHL AG+LRV H+QASL+ELGRLADPPMTKDA+AGRIRRLL+M Sbjct 243 GARVDRALEILGDDVPEHLKYAGELRVAHKQASLDELGRLADPPMTKDAIAGRIRRLLAM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 AD++A GIP TE+ VT ++LE+ Sbjct 303 ADKRASDLGIPSTEANVTLEMLEE 326 >gi|325963188|ref|YP_004241094.1| hypothetical protein Asphe3_18040 [Arthrobacter phenanthrenivorans Sphe3] gi|323469275|gb|ADX72960.1| conserved hypothetical protein TIGR00647 [Arthrobacter phenanthrenivorans Sphe3] Length=326 Score = 455 bits (1170), Expect = 5e-126, Method: Compositional matrix adjust. Identities = 235/324 (73%), Positives = 282/324 (88%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 +T+ VK+ELSRL +K S R+AEV+++LRFAGGLHI+ GR+V+EAE+DL S ARRLR I Sbjct 3 LTSSVKEELSRLDIKKSSVRKAEVSAMLRFAGGLHIISGRIVIEAEVDLASTARRLRAAI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 E+YG+ + + V+SA G+R+++RYV+RV DGEALARQTGLLD RGRPVRGLP+ VV GS Sbjct 63 AEVYGHQSEIIVVSAGGLRRASRYVVRVVRDGEALARQTGLLDGRGRPVRGLPSAVVNGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 DAEA WRGAFLAHGSLTEPGRSS+LEV+CPGPE+ALALVGAARRL + AKAREVRG D Sbjct 123 AADAEAVWRGAFLAHGSLTEPGRSSSLEVTCPGPESALALVGAARRLDIQAKAREVRGVD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDG+ I ALLTRMGA D +VWEERR+R+EVRATANRLANFDDANLRRSA+AAVAA Sbjct 183 RVVIRDGDTIAALLTRMGAHDALMVWEERRMRKEVRATANRLANFDDANLRRSAQAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 ARVERALEILGD VP+HL AG+LRV H+QASL+ELGRLADP MTKDA+AGRIRRLL+M Sbjct 243 GARVERALEILGDDVPDHLKYAGELRVAHKQASLDELGRLADPVMTKDAIAGRIRRLLAM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 AD++A GIP T++ VTP++L++ Sbjct 303 ADKRALDLGIPGTDANVTPEMLDE 326 >gi|331697223|ref|YP_004333462.1| sporulation transcription regulator whiA [Pseudonocardia dioxanivorans CB1190] gi|326951912|gb|AEA25609.1| sporulation transcription regulator whiA [Pseudonocardia dioxanivorans CB1190] Length=327 Score = 455 bits (1170), Expect = 5e-126, Method: Compositional matrix adjust. Identities = 261/325 (81%), Positives = 284/325 (88%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSRL V S RRAEV SLLRFAGGLHIVGGRVV+EAE+D GS+ARRLR+EI Sbjct 3 MTAAVKDELSRLSVTKPSCRRAEVASLLRFAGGLHIVGGRVVIEAEVDTGSVARRLRREI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 +LYG+ HV++A G+R+S RYV+RV DGE LARQTGLLD RGRPVRGLP VV G Sbjct 63 HDLYGHQCEAHVITAGGLRRSARYVIRVVRDGEGLARQTGLLDARGRPVRGLPPPVVSGD 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEV+CPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 123 VSDAEAAWRGAFLAHGSLTEPGRSSALEVTCPGPEAALALVGAARRLGVTAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDG+AI ALLTRMGA + L WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGDAISALLTRMGAHSSVLAWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARV RALEILGD VP+HL +AGKLR EH QASLEELG+LADPPMTKDAVAGRIRRLL M Sbjct 243 AARVSRALEILGDDVPQHLLAAGKLRAEHTQASLEELGQLADPPMTKDAVAGRIRRLLHM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 AD++A GIPDTES VTP++LEDA Sbjct 303 ADKRAADLGIPDTESAVTPEMLEDA 327 >gi|220912582|ref|YP_002487891.1| hypothetical protein Achl_1826 [Arthrobacter chlorophenolicus A6] gi|238055394|sp|B8H7M2.1|WHIA_ARTCA RecName: Full=Putative sporulation transcription regulator whiA gi|219859460|gb|ACL39802.1| protein of unknown function DUF199 [Arthrobacter chlorophenolicus A6] Length=326 Score = 452 bits (1164), Expect = 2e-125, Method: Compositional matrix adjust. Identities = 234/324 (73%), Positives = 281/324 (87%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 +T VK+ELSRL +K S R+AEV+++LRFAGGLHI+ GR+V+EAE+DL S ARRLR I Sbjct 3 LTASVKEELSRLDIKKSSVRKAEVSAMLRFAGGLHIISGRIVIEAEVDLASTARRLRAAI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 E+YG+ + + V+SA G+R+++RYV+RV DGEALARQTGLLD RGRPVRGLP+ VV GS Sbjct 63 AEVYGHQSEIIVVSAGGLRRASRYVVRVVRDGEALARQTGLLDGRGRPVRGLPSAVVNGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 DAEA WRGAFLAHGSLTEPGRSS+LEV+CPGPE+ALALVGAARRL + AKAREVRG D Sbjct 123 AADAEAVWRGAFLAHGSLTEPGRSSSLEVTCPGPESALALVGAARRLDIQAKAREVRGVD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDG+ I ALLTRMGA D +VWEERR+R+EVRATANRLANFDDANLRRSA+AAVAA Sbjct 183 RVVIRDGDTIAALLTRMGAHDALMVWEERRMRKEVRATANRLANFDDANLRRSAQAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 ARV+RALEILGD VP+HL AG+LRV H+QASL+ELGRLADP MTKDA+AGRIRRLL+M Sbjct 243 GARVDRALEILGDDVPDHLKYAGELRVAHKQASLDELGRLADPVMTKDAIAGRIRRLLAM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 AD++A GIP T++ VTP++L++ Sbjct 303 ADKRALDLGIPGTDANVTPEMLDE 326 >gi|324999177|ref|ZP_08120289.1| putative sporulation transcription regulator whiA [Pseudonocardia sp. P1] Length=329 Score = 452 bits (1162), Expect = 4e-125, Method: Compositional matrix adjust. Identities = 260/324 (81%), Positives = 284/324 (88%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSRL V S+RRAEV SLLRFAGGLHIVGGRVV+EAE+D GS+ARRLR+EI Sbjct 3 MTATVKDELSRLTVTKQSSRRAEVASLLRFAGGLHIVGGRVVIEAEVDTGSVARRLRREI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ELYG+TA HV++A G+R+S RYV+RV DGE LARQTGLLD RGRPVRGLP VV G Sbjct 63 HELYGHTADAHVITAGGLRRSARYVIRVIRDGEGLARQTGLLDNRGRPVRGLPPPVVSGD 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSSALEV+CPGPEAALALVGAARRLGV AKAREVRGAD Sbjct 123 LSDAEAAWRGAFLAHGSLTEPGRSSALEVTCPGPEAALALVGAARRLGVAAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDG+AIGALLTRMGA + L WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGDAIGALLTRMGAHQSVLSWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARV RAL+ILGD VPEHL +AG LR +H QASLEELG+LADPPMTKDAVAGRIRRLL Sbjct 243 AARVSRALDILGDEVPEHLRAAGTLRAQHTQASLEELGQLADPPMTKDAVAGRIRRLLQT 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 AD+KA GIPDTES VT ++LE+ Sbjct 303 ADKKAAELGIPDTESAVTAEMLEE 326 >gi|308177688|ref|YP_003917094.1| hypothetical protein AARI_19050 [Arthrobacter arilaitensis Re117] gi|307745151|emb|CBT76123.1| conserved hypothetical protein [Arthrobacter arilaitensis Re117] Length=326 Score = 450 bits (1158), Expect = 1e-124, Method: Compositional matrix adjust. Identities = 233/323 (73%), Positives = 276/323 (86%), Gaps = 0/323 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 +T VKDELSR+ ++ S R+AEV+++LRF+GGLHIV GR+V+EAE+DL + ARRL+ I Sbjct 3 LTASVKDELSRVEIRKPSVRKAEVSTMLRFSGGLHIVSGRIVIEAEVDLAATARRLKIAI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ELYG+ A + ++S SGIRK +RY++RV+ DGE LARQTGLLD RGRPVRGLP+ +V GS Sbjct 63 GELYGHDAEIVMVSGSGIRKGSRYIVRVSKDGEVLARQTGLLDQRGRPVRGLPSVIVNGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 DAEA WRGAFL+HGSLTEPGRSSALE++CPGPEAALALVGAARRLG+ KAREVRG D Sbjct 123 TADAEAVWRGAFLSHGSLTEPGRSSALEITCPGPEAALALVGAARRLGLTVKAREVRGVD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDG+AI LLTRMGA D +VWEERR+R+EVRATANRLANFDDANLRRSA+AAVAA Sbjct 183 RVVIRDGDAIAQLLTRMGAHDALMVWEERRMRKEVRATANRLANFDDANLRRSAQAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 ARVERAL ILGD VPEHL AG LR+EH+QASL+ELGR+A+PPMTKDA+AGRIRRLL+M Sbjct 243 GARVERALSILGDEVPEHLRYAGLLRLEHKQASLDELGRMAEPPMTKDAIAGRIRRLLAM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLE 323 AD+KA GIP TES V + LE Sbjct 303 ADKKASDLGIPGTESGVPGEELE 325 >gi|302525896|ref|ZP_07278238.1| sporulation regulatory protein [Streptomyces sp. AA4] gi|302434791|gb|EFL06607.1| sporulation regulatory protein [Streptomyces sp. AA4] Length=327 Score = 445 bits (1144), Expect = 5e-123, Method: Compositional matrix adjust. Identities = 256/325 (79%), Positives = 289/325 (89%), Gaps = 1/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSRL + + RRAEV SLLRFAGGLHIV GRVVVEAELD GS+ARRLRKEI Sbjct 1 MTAAVKDELSRLEITKIGPRRAEVASLLRFAGGLHIVAGRVVVEAELDTGSVARRLRKEI 60 Query 61 FELYGYTAVVHVLSASG-IRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGG 119 ELYG+ + VHV++ASG +RK TRYV+RV DGE LARQTGL+D RGRPVRGLPA VV G Sbjct 61 HELYGHHSDVHVITASGGLRKGTRYVVRVVKDGEGLARQTGLIDQRGRPVRGLPAAVVSG 120 Query 120 SIDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGA 179 + DAEAAWRGAFLAHGSLTEPGRSS+LEV+CPGPEAALALVGAARR+G+ AK+REVRGA Sbjct 121 GVADAEAAWRGAFLAHGSLTEPGRSSSLEVTCPGPEAALALVGAARRMGIQAKSREVRGA 180 Query 180 DRVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVA 239 DRVVVRDG+AIGALLTR+GA + L WEERR+RREVRATANRLANFDDANLRRSARAAVA Sbjct 181 DRVVVRDGDAIGALLTRLGAHTSVLQWEERRMRREVRATANRLANFDDANLRRSARAAVA 240 Query 240 AAARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLS 299 AAARVERALEILGDT P+HL +AG+LR+ +RQASLEELG+L+DP MTKDAVAGRIRRLL+ Sbjct 241 AAARVERALEILGDTAPDHLLAAGRLRLSNRQASLEELGQLSDPQMTKDAVAGRIRRLLA 300 Query 300 MADRKAKVDGIPDTESVVTPDLLED 324 MAD++AK IPDTES VTP++LE+ Sbjct 301 MADKRAKELNIPDTESAVTPEMLEE 325 >gi|256379210|ref|YP_003102870.1| hypothetical protein Amir_5203 [Actinosynnema mirum DSM 43827] gi|255923513|gb|ACU39024.1| protein of unknown function DUF199 [Actinosynnema mirum DSM 43827] Length=328 Score = 442 bits (1138), Expect = 2e-122, Method: Compositional matrix adjust. Identities = 250/323 (78%), Positives = 288/323 (90%), Gaps = 0/323 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT+ VKDELSRL V RRAEV SLLRFAGGLHIVGGRVVVEAELDLGS ARRLR+EI Sbjct 3 MTSAVKDELSRLAVSKTCCRRAEVASLLRFAGGLHIVGGRVVVEAELDLGSTARRLRREI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ELYG+ + V +++SG+RK TR+V+RV DGE LARQTGLLD RGRPVRGLPA VV G Sbjct 63 HELYGHQSDVFTITSSGLRKGTRFVVRVVKDGEGLARQTGLLDPRGRPVRGLPAPVVSGG 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAFLAHGSLTEPGRSS+LEV+CPGPEAALALVGAARR+G+G+K+REVRGA+ Sbjct 123 VCDAEAAWRGAFLAHGSLTEPGRSSSLEVTCPGPEAALALVGAARRMGIGSKSREVRGAE 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDG+AIGA+LTR+GA D+ L WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVIRDGDAIGAMLTRLGAHDSVLAWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARV+RALEILG P+HLA+AG+LR+ HRQASLEELG+L++P MTKDAVAGRIRRLL+M Sbjct 243 AARVQRALEILGAEAPDHLAAAGQLRLAHRQASLEELGQLSEPQMTKDAVAGRIRRLLAM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLE 323 AD++A+ G+PDTES VT D+LE Sbjct 303 ADKRARDLGLPDTESAVTADMLE 325 >gi|300784687|ref|YP_003764978.1| hypothetical protein AMED_2781 [Amycolatopsis mediterranei U32] gi|299794201|gb|ADJ44576.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340526110|gb|AEK41315.1| putative sporulation transcription regulator whiA [Amycolatopsis mediterranei S699] Length=330 Score = 442 bits (1136), Expect = 5e-122, Method: Compositional matrix adjust. Identities = 254/325 (79%), Positives = 289/325 (89%), Gaps = 1/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSRL + + RRAEV SLLRFAGGLHIV GRVVVEAELD GS+ARRLRKEI Sbjct 3 MTAAVKDELSRLEITKIGPRRAEVASLLRFAGGLHIVAGRVVVEAELDTGSVARRLRKEI 62 Query 61 FELYGYTAVVHVLSASG-IRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGG 119 ELYG+ + VHV++ASG +RK TRYV+RV DGE LARQTGL+D RGRPVRGLPA VV G Sbjct 63 HELYGHHSDVHVITASGGLRKGTRYVVRVVKDGEGLARQTGLIDQRGRPVRGLPAAVVSG 122 Query 120 SIDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGA 179 + DAEAAWRGAFLAHGSLTEPGRSS+LEV+CPGPEAALALVGAARR+G+ AK+REVRGA Sbjct 123 GVADAEAAWRGAFLAHGSLTEPGRSSSLEVTCPGPEAALALVGAARRMGIQAKSREVRGA 182 Query 180 DRVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVA 239 DRVVVRDG+AIGALLTR+GA + L WEERR+RREVRATANRLANFDDANLRRSARAAVA Sbjct 183 DRVVVRDGDAIGALLTRLGAHTSVLQWEERRMRREVRATANRLANFDDANLRRSARAAVA 242 Query 240 AAARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLS 299 AAARVERALEILG+T P+HL +AG+LR+ +RQASLEELG+L++P MTKDAVAGRIRRLL+ Sbjct 243 AAARVERALEILGETAPDHLLAAGRLRLSNRQASLEELGQLSEPQMTKDAVAGRIRRLLA 302 Query 300 MADRKAKVDGIPDTESVVTPDLLED 324 MAD++AK IPDTES VTP++LE+ Sbjct 303 MADKRAKDLNIPDTESAVTPEMLEE 327 >gi|134098711|ref|YP_001104372.1| sporulation regulatory protein [Saccharopolyspora erythraea NRRL 2338] gi|291003602|ref|ZP_06561575.1| putative sporulation transcription regulator whiA [Saccharopolyspora erythraea NRRL 2338] gi|238055450|sp|A4FBM2.1|WHIA_SACEN RecName: Full=Putative sporulation transcription regulator whiA gi|133911334|emb|CAM01447.1| sporulation regulatory protein [Saccharopolyspora erythraea NRRL 2338] Length=326 Score = 441 bits (1135), Expect = 5e-122, Method: Compositional matrix adjust. Identities = 252/323 (79%), Positives = 285/323 (89%), Gaps = 0/323 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT+ VKDELSRL V RR+EV+SLLRFAGGLHIV GRVVVEAELD GS ARRLRKEI Sbjct 3 MTSAVKDELSRLSVTKTCCRRSEVSSLLRFAGGLHIVAGRVVVEAELDSGSSARRLRKEI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 EL+G+ + VHV+++ G+RK TRYV+RV DGE LARQTGLLD RGRPVRGLPA VV G Sbjct 63 HELFGHQSDVHVITSGGLRKGTRYVVRVVKDGEGLARQTGLLDPRGRPVRGLPAHVVSGG 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 D+E+AWRGAFLAHGSLTEPGRSS+LEV+CPGPEAALALVGAARRLG+ AK+REVRGAD Sbjct 123 ACDSESAWRGAFLAHGSLTEPGRSSSLEVTCPGPEAALALVGAARRLGIQAKSREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDG+AIGALLTR+GA + L WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGDAIGALLTRLGAHSSVLAWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 AARVERALE+LG T P+HL AGKLR+ HRQASLEELG+LA+PPMTKDAVAGRIRRLL+M Sbjct 243 AARVERALELLGPTAPDHLLVAGKLRLSHRQASLEELGQLAEPPMTKDAVAGRIRRLLAM 302 Query 301 ADRKAKVDGIPDTESVVTPDLLE 323 AD++A+ G+PDTES VT ++LE Sbjct 303 ADKRARELGLPDTESAVTAEMLE 325 >gi|295395304|ref|ZP_06805508.1| transcriptional regulatory protein WhiA [Brevibacterium mcbrellneri ATCC 49030] gi|294971855|gb|EFG47726.1| transcriptional regulatory protein WhiA [Brevibacterium mcbrellneri ATCC 49030] Length=327 Score = 439 bits (1129), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 243/324 (75%), Positives = 281/324 (87%), Gaps = 0/324 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 +T VKDEL+R V +AR+AEV+SLLRF+ LHIV G +V+E ELD G ARRLR EI Sbjct 3 LTAQVKDELARFVEPRTAARKAEVSSLLRFSSALHIVAGSIVIEVELDTGVAARRLRSEI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 +LYG+ A + V++ SG++K +R+++RV DG ALARQ GL+D +GRPVRGLPA VV GS Sbjct 63 KDLYGHVAEIIVINGSGLKKGSRFMVRVGTDGVALARQAGLIDAQGRPVRGLPAAVVNGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DA+AAWRGAFLAHGSLTEPGRSSALEV+CPGPEAALALVGAARRLG+ AKAREVRG D Sbjct 123 LTDAKAAWRGAFLAHGSLTEPGRSSALEVTCPGPEAALALVGAARRLGISAKAREVRGVD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDGEAIGALLT MGA+ TRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVIRDGEAIGALLTSMGAEQTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 ARVERALEILGD VPEHL AGKLR+EH+QASLEELG+LA+PPMTKDA+AGRIRRLL+ Sbjct 243 GARVERALEILGDEVPEHLKYAGKLRLEHKQASLEELGQLAEPPMTKDAIAGRIRRLLAT 302 Query 301 ADRKAKVDGIPDTESVVTPDLLED 324 AD+KA GIPDTE+ +TP++LED Sbjct 303 ADKKAAELGIPDTEANLTPEMLED 326 >gi|284990550|ref|YP_003409104.1| hypothetical protein Gobs_2045 [Geodermatophilus obscurus DSM 43160] gi|284063795|gb|ADB74733.1| protein of unknown function DUF199 [Geodermatophilus obscurus DSM 43160] Length=326 Score = 433 bits (1114), Expect = 2e-119, Method: Compositional matrix adjust. Identities = 246/322 (77%), Positives = 279/322 (87%), Gaps = 0/322 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSR+ S R+AEVT+LLRF+GGLHIVGGRVV+EAELD GS+ARRLR++I Sbjct 3 MTAMVKDELSRVECTKTSERKAEVTALLRFSGGLHIVGGRVVIEAELDTGSVARRLRRDI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 E+YGYT+ V VL+ IR+ RY++R+A GE LARQTGL+D RGRPVRGLP VV G Sbjct 63 SEVYGYTSGVSVLAGGNIRRGVRYLVRIAKHGEGLARQTGLVDQRGRPVRGLPPSVVSGG 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 ++DAEAAWRGAFLAHGSLTEPGRSS+LEV+CPGPEAA+ALVGAARRLG+ AKAREVRGAD Sbjct 123 LNDAEAAWRGAFLAHGSLTEPGRSSSLEVTCPGPEAAMALVGAARRLGIAAKAREVRGAD 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVVVRDG+AI ALLTRMGA D L WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 183 RVVVRDGDAISALLTRMGAHDAVLAWEERRMRREVRATANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 +ARVERALEIL PEHL AG+LR+E+ QASLEELG+ ADPPMTKDAVAGRIRRLL+M Sbjct 243 SARVERALEILDGDAPEHLLVAGRLRLEYGQASLEELGQRADPPMTKDAVAGRIRRLLAM 302 Query 301 ADRKAKVDGIPDTESVVTPDLL 322 AD++AK GI DTESVVT D+L Sbjct 303 ADKRAKDLGISDTESVVTEDML 324 >gi|84496556|ref|ZP_00995410.1| putative sporulation regulatory protein [Janibacter sp. HTCC2649] gi|84383324|gb|EAP99205.1| putative sporulation regulatory protein [Janibacter sp. HTCC2649] Length=334 Score = 427 bits (1097), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 238/323 (74%), Positives = 279/323 (87%), Gaps = 0/323 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VKDELSR V R++EV + LRFAGGLHI+GGR+VVEAELD + ARRLR+EI Sbjct 11 MTAKVKDELSRHEVTKPCCRKSEVAATLRFAGGLHIIGGRIVVEAELDTANAARRLRREI 70 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 ELYG T V VL+A G+RK +RYV+RV DGEALARQTGL+D RGRPVRGLP +VV GS Sbjct 71 HELYGQTPEVLVLAAGGLRKGSRYVVRVVQDGEALARQTGLIDGRGRPVRGLPPKVVSGS 130 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + DAEAAWRGAF+AHGSLTEPGRSSALE++CPGPEAALALVGAARRLG+ AKAREVRG D Sbjct 131 VCDAEAAWRGAFIAHGSLTEPGRSSALELTCPGPEAALALVGAARRLGIQAKAREVRGID 190 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDG+AIGA+LTR+GA D L WEERR+RREVRATANRLANFDDANLRRSARAAVAA Sbjct 191 RVVIRDGDAIGAMLTRLGAHDAVLAWEERRMRREVRATANRLANFDDANLRRSARAAVAA 250 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 +RV RALEILG+ +P+HL AG+LR++H+QASLEELG+LA P MTKDAVAGRIRRLL+M Sbjct 251 GSRVGRALEILGEDIPDHLREAGQLRLQHKQASLEELGQLAQPAMTKDAVAGRIRRLLAM 310 Query 301 ADRKAKVDGIPDTESVVTPDLLE 323 AD++A+ GIP T++ +TPD+L+ Sbjct 311 ADKRAEDMGIPGTDADLTPDMLD 333 >gi|336117066|ref|YP_004571833.1| WhiA family regulatory protein [Microlunatus phosphovorus NM-1] gi|334684845|dbj|BAK34430.1| WhiA family regulatory protein [Microlunatus phosphovorus NM-1] Length=328 Score = 427 bits (1097), Expect = 2e-117, Method: Compositional matrix adjust. Identities = 227/325 (70%), Positives = 275/325 (85%), Gaps = 0/325 (0%) Query 1 MTTDVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAELDLGSIARRLRKEI 60 MT VK EL+ + V S R+AE+ S LRFAGGLHIV GR+V+EAELD G+ ARRLR +I Sbjct 3 MTAQVKAELATVKVTRPSNRKAEIASTLRFAGGLHIVSGRIVIEAELDTGAAARRLRTDI 62 Query 61 FELYGYTAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDMRGRPVRGLPAQVVGGS 120 +++G+ + + +++ SG+R+ TRYV+RV DG ALARQTGL+D RGRP RGLPAQ+V GS Sbjct 63 ADVFGHDSELVIVNGSGLRRGTRYVVRVIKDGSALARQTGLVDGRGRPARGLPAQIVSGS 122 Query 121 IDDAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVGAKAREVRGAD 180 + D EAAWRGAFLAHGSLTEPGRS +LEV+CPGPEAALALVGA RRLG+ AKAR+VR D Sbjct 123 LGDCEAAWRGAFLAHGSLTEPGRSMSLEVTCPGPEAALALVGAGRRLGISAKARDVRNID 182 Query 181 RVVVRDGEAIGALLTRMGAQDTRLVWEERRLRREVRATANRLANFDDANLRRSARAAVAA 240 RVV+RDG+AI ALLTRMGA D+ L+WE+RR+RREVRA+ANRLANFDDANLRRSARAAVAA Sbjct 183 RVVIRDGDAIAALLTRMGAHDSVLIWEDRRMRREVRASANRLANFDDANLRRSARAAVAA 242 Query 241 AARVERALEILGDTVPEHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM 300 ARVERALEILGD VPEHL +AG LR+E++QASLEELG+L DP +TKDAVAGRIRRLL+ Sbjct 243 GARVERALEILGDDVPEHLKAAGLLRIENKQASLEELGQLHDPQLTKDAVAGRIRRLLAT 302 Query 301 ADRKAKVDGIPDTESVVTPDLLEDA 325 AD++A GIP+TE+ + +LL+DA Sbjct 303 ADKRAAELGIPNTEAGLVAELLDDA 327 Lambda K H 0.319 0.134 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 577149478596 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40