BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1430
Length=528
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840887|ref|NP_335924.1| PE family protein [Mycobacterium tu... 1030 0.0
gi|340626444|ref|YP_004744896.1| PE family protein [Mycobacteriu... 1026 0.0
gi|289761589|ref|ZP_06520967.1| PE family protein [Mycobacterium... 1010 0.0
gi|183982248|ref|YP_001850539.1| PE-PGRS family protein, PE16 [M... 638 0.0
gi|240171801|ref|ZP_04750460.1| PE-PGRS family protein, PE16 [My... 573 2e-161
gi|289757538|ref|ZP_06516916.1| LOW QUALITY PROTEIN: PE family p... 506 5e-141
gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tu... 333 7e-89
gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacteriu... 329 9e-88
gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium... 318 1e-84
gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bo... 318 1e-84
gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium... 318 2e-84
gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tu... 318 2e-84
gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium... 317 4e-84
gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium... 316 6e-84
gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacteriu... 312 1e-82
gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacteriu... 310 5e-82
gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium... 306 6e-81
gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacteriu... 303 4e-80
gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacteriu... 303 7e-80
gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacteriu... 301 2e-79
gi|240173260|ref|ZP_04751918.1| PPE family protein [Mycobacteriu... 301 2e-79
gi|57116696|ref|YP_177697.1| PE family protein [Mycobacterium tu... 299 9e-79
gi|31791337|ref|NP_853830.1| PE family protein [Mycobacterium bo... 297 3e-78
gi|298527551|ref|ZP_07014960.1| PE family protein [Mycobacterium... 297 4e-78
gi|148821351|ref|YP_001286105.1| PE family protein [Mycobacteriu... 297 4e-78
gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacteriu... 296 9e-78
gi|340625196|ref|YP_004743648.1| PE family protein [Mycobacteriu... 295 1e-77
gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium... 295 2e-77
gi|15839539|ref|NP_334576.1| PE family protein [Mycobacterium tu... 293 3e-77
gi|240168172|ref|ZP_04746831.1| PE family protein [Mycobacterium... 286 4e-75
gi|183980415|ref|YP_001848706.1| PE family protein, PE4 [Mycobac... 284 3e-74
gi|240168169|ref|ZP_04746828.1| PE family protein [Mycobacterium... 283 5e-74
gi|183980413|ref|YP_001848704.1| PE-PGRS family protein [Mycobac... 283 5e-74
gi|57117005|ref|YP_177893.1| PPE family protein [Mycobacterium t... 282 1e-73
gi|15842148|ref|NP_337185.1| PPE family protein [Mycobacterium t... 282 1e-73
gi|289751233|ref|ZP_06510611.1| PPE family protein [Mycobacteriu... 281 1e-73
gi|240168173|ref|ZP_04746832.1| PE family protein [Mycobacterium... 281 2e-73
gi|31793793|ref|NP_856286.1| PPE family protein [Mycobacterium b... 281 2e-73
gi|340627626|ref|YP_004746078.1| PPE family protein [Mycobacteri... 281 2e-73
gi|308378398|ref|ZP_07482454.2| PPE family protein [Mycobacteriu... 281 3e-73
gi|289762782|ref|ZP_06522160.1| PPE family protein [Mycobacteriu... 281 3e-73
gi|118616727|ref|YP_905059.1| PE family protein [Mycobacterium u... 278 2e-72
gi|118616775|ref|YP_905107.1| PE family protein [Mycobacterium u... 277 3e-72
gi|167966667|ref|ZP_02548944.1| PPE family protein [Mycobacteriu... 277 3e-72
gi|340625188|ref|YP_004743640.1| pe family protein [Mycobacteriu... 273 6e-71
gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacteri... 273 7e-71
gi|340625197|ref|YP_004743649.1| PE family protein [Mycobacteriu... 273 8e-71
gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacteriu... 271 2e-70
gi|289441535|ref|ZP_06431279.1| PE family protein [Mycobacterium... 271 3e-70
gi|289568058|ref|ZP_06448285.1| PE family protein [Mycobacterium... 270 3e-70
>gi|15840887|ref|NP_335924.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792624|ref|NP_855117.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116862|ref|YP_177810.1| PE family protein [Mycobacterium tuberculosis H37Rv]
71 more sequence titles
Length=528
Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/528 (100%), Positives = 528/528 (100%), Gaps = 0/528 (0%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ
Sbjct 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGRTALILGS 120
EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGRTALILGS
Sbjct 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGRTALILGS 120
Query 121 TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH 180
TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH
Sbjct 121 TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH 180
Query 181 TAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGG 240
TAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGG
Sbjct 181 TAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGG 240
Query 241 ILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYY 300
ILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYY
Sbjct 241 ILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYY 300
Query 301 SHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDL 360
SHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDL
Sbjct 301 SHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDL 360
Query 361 RAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLN 420
RAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLN
Sbjct 361 RAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLN 420
Query 421 PVVTSGIYQAGAELSVAAAGYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAI 480
PVVTSGIYQAGAELSVAAAGYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAI
Sbjct 421 PVVTSGIYQAGAELSVAAAGYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAI 480
Query 481 QDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFPV 528
QDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFPV
Sbjct 481 QDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFPV 528
>gi|340626444|ref|YP_004744896.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004634|emb|CCC43778.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=528
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/528 (99%), Positives = 526/528 (99%), Gaps = 0/528 (0%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ
Sbjct 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGRTALILGS 120
EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGRTALILGS
Sbjct 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGRTALILGS 120
Query 121 TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH 180
TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH
Sbjct 121 TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH 180
Query 181 TAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGG 240
TAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGG
Sbjct 181 TAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGG 240
Query 241 ILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYY 300
ILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYY
Sbjct 241 ILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYY 300
Query 301 SHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDL 360
SHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDL
Sbjct 301 SHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDL 360
Query 361 RAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLN 420
RAIIELGYDRTGYADVPTPAALFPV IDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLN
Sbjct 361 RAIIELGYDRTGYADVPTPAALFPVRIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLN 420
Query 421 PVVTSGIYQAGAELSVAAAGYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAI 480
PVVTSGIYQAGAELSVAA GYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAI
Sbjct 421 PVVTSGIYQAGAELSVAAVGYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAI 480
Query 481 QDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFPV 528
QDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFPV
Sbjct 481 QDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFPV 528
>gi|289761589|ref|ZP_06520967.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|289709095|gb|EFD73111.1| PE family protein [Mycobacterium tuberculosis GM 1503]
Length=528
Score = 1010 bits (2611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/528 (99%), Positives = 520/528 (99%), Gaps = 0/528 (0%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ
Sbjct 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGRTALILGS 120
EFQALSAQASAFHDR +GWYVDAEAANAALVDTAATGASELGSGGRTALILGS
Sbjct 61 EFQALSAQASAFHDRVRAGPKRRSGWYVDAEAANAALVDTAATGASELGSGGRTALILGS 120
Query 121 TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH 180
TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH
Sbjct 121 TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH 180
Query 181 TAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGG 240
TAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGG
Sbjct 181 TAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGG 240
Query 241 ILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYY 300
ILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYY
Sbjct 241 ILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYY 300
Query 301 SHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDL 360
SHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDL
Sbjct 301 SHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDL 360
Query 361 RAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLN 420
RAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLN
Sbjct 361 RAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLN 420
Query 421 PVVTSGIYQAGAELSVAAAGYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAI 480
PVVTSGIYQAGAELSVAAAGYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAI
Sbjct 421 PVVTSGIYQAGAELSVAAAGYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAI 480
Query 481 QDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFPV 528
QDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFPV
Sbjct 481 QDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFPV 528
>gi|183982248|ref|YP_001850539.1| PE-PGRS family protein, PE16 [Mycobacterium marinum M]
gi|183175574|gb|ACC40684.1| PE-PGRS family protein, PE16 [Mycobacterium marinum M]
Length=612
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/612 (58%), Positives = 421/612 (69%), Gaps = 85/612 (13%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MSFV PE V A AS L +G+A+ A AAAA TT++L AAADEVSA IA L H Q
Sbjct 1 MSFVVTAPETVVAAASQLTGIGSAIEAANAAAAALTTRLLPAAADEVSAGIAALMSTHAQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTA------------------- 101
E+Q L Q + +HD+ V+AL AGWY DAE NAAL+
Sbjct 61 EYQLLGGQLATYHDQLVQALDRTAGWYADAETGNAALLRNVQQELLTGLTAPGRAWSGAG 120
Query 102 ----------ATGASELGSGGRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGL 151
A +S L SGGR+ L++GSTGTPRP + +M++VYD ++APHY G + G+
Sbjct 121 AASAGASGVDALMSSALLSGGRSVLVVGSTGTPRPSYRFMREVYDLFVAPHYFGDSLFGV 180
Query 152 YTPAQFQPWTGIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRH 211
TPAQFQP+TGIP+LT+D+S A GA YLH AI QQ+A GN VVV GFSQGASVATLEMRH
Sbjct 181 QTPAQFQPFTGIPNLTFDESAATGASYLHAAITQQLADGNRVVVAGFSQGASVATLEMRH 240
Query 212 LASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIY 271
L SLP PSP+ LSFVLLGNPNNPNGGILARFPGLY+QS+GLTFNGATP T+Y TT+Y
Sbjct 241 LQSLPIDSRPSPEDLSFVLLGNPNNPNGGILARFPGLYIQSVGLTFNGATPVTEYPTTVY 300
Query 272 TTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYI 331
TTQYDGFADFP+YPLN++ADVNALLGI YSHSLYYGLTP+QVA+G+VLPVSSPD NTTYI
Sbjct 301 TTQYDGFADFPQYPLNVVADVNALLGISYSHSLYYGLTPDQVAAGVVLPVSSPDVNTTYI 360
Query 332 LLPNEDLPLLQPLRGIVPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIA 391
L+PNE LPLLQPLRGIVP+ +LD IEP LR ++ELGYDRTGYADVPTPA+LFP +++P
Sbjct 361 LIPNEHLPLLQPLRGIVPDSVLDGIEPGLRDVVELGYDRTGYADVPTPASLFPANVNPNV 420
Query 392 V----------------------------------------------PPQIGAAI----- 400
V P + +AI
Sbjct 421 VAGAFVEGAVRGIDNGLAGMGLPPLPDLPAAPLLPEIWSNAPPIPGWPASVPSAIAVPPQ 480
Query 401 -GGPLTA-LDGLLDTV---INDQLNPVVTSGIYQAGAELSVAAAGYGAPAGVTNAIFIGQ 455
GG + LD L T+ IN Q+NP +TSGIYQ GA+LS AA +GA + + NAI++G+
Sbjct 481 LGGAIAGPLDHLYRTLDSVINGQINPAITSGIYQYGADLSAEAARHGASSELLNAIYVGR 540
Query 456 QVLPILVEGPGALVTADTHYLVDAIQDLAAGDLSGFNQNLQLIPATNIALLVFAAGIPAV 515
QVLPIL+EGPG ++TADT+Y ++AI+DLAAG+LSGFNQNLQLIPATN LL F A IP
Sbjct 541 QVLPILIEGPGVILTADTYYSINAIKDLAAGNLSGFNQNLQLIPATNAMLLTFGATIPIA 600
Query 516 AAVAILTGQDFP 527
A V+ G+DFP
Sbjct 601 AGVSAYIGRDFP 612
>gi|240171801|ref|ZP_04750460.1| PE-PGRS family protein, PE16 [Mycobacterium kansasii ATCC 12478]
Length=580
Score = 573 bits (1478), Expect = 2e-161, Method: Compositional matrix adjust.
Identities = 348/581 (60%), Positives = 403/581 (70%), Gaps = 56/581 (9%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MSF+ A P+M+A+ ASD+A +GAA+S A AAA TTQ+LAA ADEVS IA LFGA +
Sbjct 1 MSFLVAEPDMMASAASDVARIGAAISAANDAAAATTTQLLAAGADEVSQGIAALFGAFAR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVD---TAATGASELGSGGRTALI 117
++QA+SAQ +A+HD VRAL A A Y AEAAN L+ GA G GG T LI
Sbjct 61 DYQAVSAQIAAYHDHVVRALGAGAEAYTGAEAANRTLLQPLPNRTVGAP--GGGGPTVLI 118
Query 118 LGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAG 177
+G TG P P F Y+QQVY+ YI P Y G G+ TP QFQP+TGIPSLT+D+SVA GA
Sbjct 119 MGPTGNPGPSFRYLQQVYNLYIRPFYPGSPVLGVTTPEQFQPFTGIPSLTFDESVAAGAA 178
Query 178 YLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNP 237
LH AIM Q AAG+DVVVLGFSQ ASVAT EMR+LASLPA + P PDQLSFVLLG+PNNP
Sbjct 179 DLHAAIMAQHAAGHDVVVLGFSQSASVATAEMRYLASLPADLRPGPDQLSFVLLGDPNNP 238
Query 238 NGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLG 297
NGG+LARFPGL++Q +GLTF+GATP Y TT+YT QYDGFADFP+YPLNI AD+NALLG
Sbjct 239 NGGLLARFPGLFVQPMGLTFSGATPSNLYPTTVYTRQYDGFADFPQYPLNIPADLNALLG 298
Query 298 IYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIE 357
IYY+H Y LTP QVA+G+V PVS D TTY+LLP+E LPLL+PLRGIVP PLLDL+E
Sbjct 299 IYYAHGTYQELTPAQVAAGVVQPVSPADVYTTYMLLPSEHLPLLEPLRGIVPAPLLDLVE 358
Query 358 PDLRAIIELGYDRTGYADVPTPAALFPVHID---------------------PIAVPP-- 394
PDLR IIELGYDRTGYADVPTPA LFP ID + +PP
Sbjct 359 PDLRVIIELGYDRTGYADVPTPAGLFPTDIDALTLAGDLADSTAHGIDHALADVGLPPLP 418
Query 395 ----------------------------QIGAAIGGPLTALDGLLDTVINDQLNPVVTSG 426
QIG AI GPL L GLLDTVIND L+P +TS
Sbjct 419 KVAIPNLPLPQPPSVPAPAIPAALPVPPQIGDAIDGPLDHLPGLLDTVINDTLDPAITSA 478
Query 427 IYQAGAELSVAAAGYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAIQDLAAG 486
IYQAG L AA GA + NAI + QQ++P+LVEGPG VTAD YL D I DLAAG
Sbjct 479 IYQAGDSLLGAAVSQGASPQLINAIVVAQQMMPVLVEGPGYFVTADAQYLADGIGDLAAG 538
Query 487 DLSGFNQNLQLIPATNIALLVFAAGIPAVAAVAILTGQDFP 527
DL+GF+QN+QLIPATN+ L VF AGI VA AIL+GQ FP
Sbjct 539 DLNGFSQNMQLIPATNVTLGVFGAGIAGVAIAAILSGQPFP 579
>gi|289757538|ref|ZP_06516916.1| LOW QUALITY PROTEIN: PE family protein [Mycobacterium tuberculosis
T85]
gi|289713102|gb|EFD77114.1| LOW QUALITY PROTEIN: PE family protein [Mycobacterium tuberculosis
T85]
Length=336
Score = 506 bits (1302), Expect = 5e-141, Method: Compositional matrix adjust.
Identities = 261/269 (98%), Positives = 261/269 (98%), Gaps = 0/269 (0%)
Query 260 ATPDTDYATTIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVL 319
P TIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVL
Sbjct 68 CDPGHRLRDTIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVL 127
Query 320 PVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDLRAIIELGYDRTGYADVPTP 379
PVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDLRAIIELGYDRTGYADVPTP
Sbjct 128 PVSSPDTNTTYILLPNEDLPLLQPLRGIVPEPLLDLIEPDLRAIIELGYDRTGYADVPTP 187
Query 380 AALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLNPVVTSGIYQAGAELSVAAA 439
AALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLNPVVTSGIYQAGAELSVAAA
Sbjct 188 AALFPVHIDPIAVPPQIGAAIGGPLTALDGLLDTVINDQLNPVVTSGIYQAGAELSVAAA 247
Query 440 GYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAIQDLAAGDLSGFNQNLQLIP 499
GYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAIQDLAAGDLSGFNQNLQLIP
Sbjct 248 GYGAPAGVTNAIFIGQQVLPILVEGPGALVTADTHYLVDAIQDLAAGDLSGFNQNLQLIP 307
Query 500 ATNIALLVFAAGIPAVAAVAILTGQDFPV 528
ATNIALLVFAAGIPAVAAVAILTGQDFPV
Sbjct 308 ATNIALLVFAAGIPAVAAVAILTGQDFPV 336
>gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|254233542|ref|ZP_04926868.1| PE family protein [Mycobacterium tuberculosis C]
gi|254366603|ref|ZP_04982647.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|13879644|gb|AAK44384.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|124603335|gb|EAY61610.1| PE family protein [Mycobacterium tuberculosis C]
gi|134152115|gb|EBA44160.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|323717137|gb|EGB26346.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=588
Score = 333 bits (853), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 202/401 (51%), Positives = 260/401 (65%), Gaps = 19/401 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
+S+VFA P ++AA A+DLA +G+A+++ATAA A PTT + AAAADEVS A+A LFGA+GQ
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN-AALVDTAATGASELGS--------G 111
+FQA+SAQ +AFH+ F + L+AA +V+AEA N +ALV A G + S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAATNAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFN 158
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+I+G TG+P P Y+ + +I P L TP + P TG+ SL + S
Sbjct 159 QNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTS 218
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +A+LEM+HL SL APSP QL+F+L+
Sbjct 219 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPN-APSPSQLNFILI 277
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGILAR PGL + +LGL F GATPD Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 278 GNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSD 337
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
+NA+ GI H+ Y LTP Q+AS LP +NT YI + E LPLL PLR I +
Sbjct 338 INAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYI-IETEHLPLLAPLRAIPVIG 396
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL L+EP+L I+ LGY R GY A+VPTP LFP
Sbjct 397 PPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFP 437
>gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289552402|ref|ZP_06441612.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|297632625|ref|ZP_06950405.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
6 more sequence titles
Length=588
Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 203/401 (51%), Positives = 261/401 (66%), Gaps = 19/401 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
+S+VFA P ++AA A+DLA +G+A+++ATAA A PTT + AAAADEVS A+A LFGA+GQ
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN-AALVDTAATGASELGS--------G 111
+FQA+SAQ +AFH+ F + L+AAA +V+AEA N +ALV A G + S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAAKAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFN 158
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+I+G TG+P P Y+ + +I P L TP + P TG+ SL + S
Sbjct 159 QNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTS 218
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +A+LEM+HL SL APSP QL+F+L+
Sbjct 219 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPN-APSPSQLNFILI 277
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGILAR PGL + +LGL F GATPD Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 278 GNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSD 337
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
+NA+ GI H+ Y LTP Q+AS LP +NT YI + E LPLL PLR I +
Sbjct 338 INAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYI-IETEHLPLLAPLRAIPVIG 396
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL L+EP+L I+ LGY R GY A+VPTP LFP
Sbjct 397 PPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFP 437
>gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium tuberculosis SUMu001]
gi|308379707|ref|ZP_07487233.2| PE family protein [Mycobacterium tuberculosis SUMu010]
gi|308380909|ref|ZP_07491451.2| PE family protein [Mycobacterium tuberculosis SUMu011]
7 more sequence titles
Length=560
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/401 (51%), Positives = 261/401 (66%), Gaps = 19/401 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
+S+VFA P ++AA A+DLA +G+A+++ATAA A PTT + AAAADEVS A+A LFGA+GQ
Sbjct 11 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 70
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN-AALVDTAATGASELGS--------G 111
+FQA+SAQ +AFH+ F + L+AAA +V+AEA N +ALV A G + S
Sbjct 71 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFN 130
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+I+G TG+P P Y+ + +I P L TP + P TG+ SL + S
Sbjct 131 QNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTS 190
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +A+LEM+HL SL APSP QL+F+L+
Sbjct 191 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPN-APSPSQLNFILI 249
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGILAR PGL + +LGL F GATPD Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 250 GNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSD 309
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
+NA+ GI H+ Y LTP Q+AS LP +NT YI + E LPLL PLR I +
Sbjct 310 INAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYI-IETEHLPLLAPLRAIPVIG 368
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL L+EP+L I+ LGY R GY A+VPTP LFP
Sbjct 369 PPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFP 409
>gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636063|ref|YP_976286.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988536|ref|YP_002643223.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616914|emb|CAD93020.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491710|emb|CAL70171.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771649|dbj|BAH24455.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600079|emb|CCC62748.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=588
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/401 (51%), Positives = 261/401 (66%), Gaps = 19/401 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
+S+VFA P ++AA A+DLA +G+A+++ATAA A PTT + AAAADEVS A+A LFGA+GQ
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN-AALVDTAATGASELGS--------G 111
+FQA+SAQ +AFH+ F + L+AAA +V+AEA N +ALV A G + S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFN 158
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+I+G TG+P P Y+ + +I P L TP + P TG+ SL + S
Sbjct 159 QNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTS 218
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +A+LEM+HL SL APSP QL+F+L+
Sbjct 219 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPN-APSPSQLNFILI 277
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGILAR PGL + +LGL F GATPD Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 278 GNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSD 337
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
+NA+ GI H+ Y LTP Q+AS LP +NT YI + E LPLL PLR I +
Sbjct 338 INAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYI-IETEHLPLLAPLRAIPVIG 396
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL L+EP+L I+ LGY R GY A+VPTP LFP
Sbjct 397 PPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFP 437
>gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339630233|ref|YP_004721875.1| PE family protein [Mycobacterium africanum GM041182]
gi|289537161|gb|EFD41739.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339329589|emb|CCC25225.1| PE family protein [Mycobacterium africanum GM041182]
Length=588
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 203/401 (51%), Positives = 261/401 (66%), Gaps = 19/401 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
+S+VFA P ++AA A+DLA +G+A+++ATAA A PTT + AAAADEVS A+A LFGA+GQ
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN-AALVDTAATGASELGS--------G 111
+FQA+SAQ +AFH+ F + L+AAA +V+AEA N +ALV A G + S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFN 158
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+I+G TG+P P Y+ + +I P L TP + P TG+ SL + S
Sbjct 159 QNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTS 218
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +A+LEM+HL SL APSP QL+F+L+
Sbjct 219 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPN-APSPSQLNFILI 277
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGILAR PGL + +LGL F GATPD Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 278 GNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSD 337
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
+NA+ GI H+ Y LTP Q+AS LP +NT YI + E LPLL PLR I +
Sbjct 338 INAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYI-IETEHLPLLAPLRAIPVIG 396
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL L+EP+L I+ LGY R GY A+VPTP LFP
Sbjct 397 PPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFP 437
>gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659915|ref|YP_001281438.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|148821343|ref|YP_001286097.1| PE family protein [Mycobacterium tuberculosis F11]
25 more sequence titles
Length=588
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 203/401 (51%), Positives = 261/401 (66%), Gaps = 19/401 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
+S+VFA P ++AA A+DLA +G+A+++ATAA A PTT + AAAADEVS A+A LFGA+GQ
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN-AALVDTAATGASELGS--------G 111
+FQA+SAQ +AFH+ F + L+AAA +V+AEA N +ALV A G + S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFN 158
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+I+G TG+P P Y+ + +I P L TP + P TG+ SL + S
Sbjct 159 QNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTS 218
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +A+LEM+HL SL APSP QL+F+L+
Sbjct 219 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPN-APSPSQLNFILI 277
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGILAR PGL + +LGL F GATPD Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 278 GNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSD 337
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
+NA+ GI H+ Y LTP Q+AS LP +NT YI + E LPLL PLR I +
Sbjct 338 INAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYI-IETEHLPLLAPLRAIPVIG 396
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL L+EP+L I+ LGY R GY A+VPTP LFP
Sbjct 397 PPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFP 437
>gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium tuberculosis SUMu002]
gi|308370327|ref|ZP_07421092.2| PE family protein [Mycobacterium tuberculosis SUMu003]
gi|308371602|ref|ZP_07425459.2| PE family protein [Mycobacterium tuberculosis SUMu004]
9 more sequence titles
Length=560
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 203/401 (51%), Positives = 260/401 (65%), Gaps = 19/401 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
+S+VFA P ++AA A+DLA +G+A+++ATAA A PTT + AAAADEVS A+A LFGA+GQ
Sbjct 11 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 70
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN-AALVDTAATGASELGS--------G 111
+FQA+SAQ +AFH+ F + L+AAA +V+AEA N +ALV A G + S
Sbjct 71 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFN 130
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+I+G TG+P P Y+ + +I P L TP + P TG+ SL + S
Sbjct 131 QNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTS 190
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +A+LEM+HL SL APSP QL+F+L+
Sbjct 191 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPN-APSPSQLNFILI 249
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGILAR PGL + +LGL F GATPD Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 250 GNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSD 309
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
NA+ GI H+ Y LTP Q+AS LP +NT YI + E LPLL PLR I +
Sbjct 310 SNAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYI-IETEHLPLLAPLRAIPVIG 368
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL L+EP+L I+ LGY R GY A+VPTP LFP
Sbjct 369 PPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFP 409
>gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|306970340|ref|ZP_07483001.1| PE family protein [Mycobacterium tuberculosis SUMu009]
gi|308347554|gb|EFP36405.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308352180|gb|EFP41031.1| PE family protein [Mycobacterium tuberculosis SUMu009]
Length=588
Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 203/401 (51%), Positives = 260/401 (65%), Gaps = 19/401 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
+S+VFA P ++AA A+DLA +G+A+++ATAA A PTT + AAAADEVS A+A LFGA+GQ
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN-AALVDTAATGASELGS--------G 111
+FQA+SAQ +AFH+ F + L+AAA +V+AEA N +ALV A G + S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFN 158
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+I+G TG+P P Y+ + +I P L TP + P TG+ SL + S
Sbjct 159 QNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTS 218
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +A+LEM+HL SL APSP QL+F+L+
Sbjct 219 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPN-APSPSQLNFILI 277
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGILAR PGL + +LGL F GATPD Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 278 GNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSD 337
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
NA+ GI H+ Y LTP Q+AS LP +NT YI + E LPLL PLR I +
Sbjct 338 SNAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYI-IETEHLPLLAPLRAIPVIG 396
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL L+EP+L I+ LGY R GY A+VPTP LFP
Sbjct 397 PPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFP 437
>gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003377|emb|CCC42497.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=588
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 204/401 (51%), Positives = 260/401 (65%), Gaps = 19/401 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
+S+VFA P ++AA A+DLA +G+A+++ATAAAA PTT + AAAADEVS A+A LFGA+GQ
Sbjct 39 LSYVFAQPSVLAAAATDLAGIGSAINQATAAAAAPTTGLAAAAADEVSTALATLFGAYGQ 98
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANA-ALVDTAATGASELGS--------G 111
+FQA+SAQ +AFH+ F + L+AAA +V+AEA N ALV A G S
Sbjct 99 QFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTTALVHEATAGLFRPTSPPVLPPMFN 158
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+I+G TG+P P Y+ + +I P L TP + P TG+ SL + S
Sbjct 159 QNTAIIMGGTGSPIPTPSYLNAITTLFIDPVVSNPVIKALVTPEELYPITGVKSLPFQTS 218
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +A+LEM+HL SL APSP QL+F+L+
Sbjct 219 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPN-APSPSQLNFILI 277
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGILAR PGL + +LGL F GATPD Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 278 GNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSD 337
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
+NA+ GI H+ Y LTP Q+AS LP +NT YI + E LPLL PLR I +
Sbjct 338 INAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYI-IETEHLPLLAPLRAIPVIG 396
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL L+EP+L I+ LGY R GY A+VPTP LFP
Sbjct 397 PPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFP 437
>gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacterium marinum M]
gi|183173727|gb|ACC38837.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 192/406 (48%), Positives = 251/406 (62%), Gaps = 26/406 (6%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS++ A PE++A+ A+++ +G+A+S A AAA PT+ +LAAA DEVS AIA LF +G+
Sbjct 1 MSYLLAEPELLASVATEIDGIGSAISTAGTAAAGPTSSLLAAAGDEVSGAIANLFSVYGR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELG----------- 109
E QA+ AQ AF F + L+AA Y EAA+ A + A S
Sbjct 61 ECQAVLAQVEAFRSEFAQTLAAAGVAYAQTEAASLAALRGALGIPSAAPAVSSASTIPPF 120
Query 110 SGGRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYD 169
+ T+L LG TG P P Y+Q + ++ + LYTP + P TG+ SLT +
Sbjct 121 TANLTSLFLGPTGVPIPDESYVQAANNLFVRSSDI---LRPLYTPEELYPLTGVKSLTLN 177
Query 170 QSVAEGAGYLHTAIMQQVAA-GNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSF 228
SV EG L AIM Q++ GN V V G+SQ A +A+LEM+ LA+L AP+ QL+F
Sbjct 178 ASVEEGLTILDNAIMAQLSIPGNSVTVFGYSQSAIIASLEMQKLAAL-GPSAPTASQLNF 236
Query 229 VLLGNPNNPNGGILARFPGLYLQSLGLTFNGATP-DTDYATTIYTTQYDGFADFPKYPLN 287
VL+GN NPNGG+LARFP L L SLGLTF GATP DT Y T IYT +YDGFADFP+YPLN
Sbjct 237 VLVGNEMNPNGGMLARFPDLSLPSLGLTFYGATPSDTIYPTAIYTLEYDGFADFPRYPLN 296
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTN-TTYILLPNEDLPLLQPLRG 346
+AD+NA++GI + H Y LT QV S I LP S + T+Y ++P E+LPLL+PLR
Sbjct 297 FIADLNAVMGIPFVHVKYLDLTAAQVDSAIELPTSPGYSGVTSYYVIPTENLPLLEPLRA 356
Query 347 I--VPEPLLDLIEPDLRAIIELGYD------RTGYADVPTPAALFP 384
I + PL +LI+PDL+ I+ LGY T YADV TP LFP
Sbjct 357 IPVIGNPLANLIQPDLKVIVNLGYGDPNYGYSTSYADVRTPFGLFP 402
>gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=546
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 189/401 (48%), Positives = 251/401 (63%), Gaps = 22/401 (5%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V P +AA A++LA +G A+SEA A+ A PTT + AAADEVSAAIA+LFGA GQ
Sbjct 1 MSYVLTQPPAMAAAATELAGIGTAISEAAASVAGPTTTIATAAADEVSAAIAQLFGAFGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAA-LVDTAATG--------ASELGSG 111
E+QA++AQ A +++F + L+AAA Y EA +AA LV A TG G
Sbjct 61 EYQAINAQLGALYNQFTQNLAAAANAYFGDEAISAATLVKGATTGLFTPTSPPVVPPAFG 120
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TA+++ TG+P P Y+ + + ++ P G + L T + P TG+ SL + S
Sbjct 121 QNTAIVMSGTGSPIPSIQYVAAITNLFLPP---GMVVNPLNTIEELYPITGVKSLPFQNS 177
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
V G L AI +Q+ AGN V V G+SQ A +++LE++ L SL P P QLSF+ +
Sbjct 178 VQTGLQILDAAIWEQIHAGNHVTVFGYSQSAVISSLEIQQLLSLGPN-KPDPSQLSFIFI 236
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
GN NPNGGIL+R PGL + +LGL F GAT D Y TT YT +YDGFADFP+YPLN+L+D
Sbjct 237 GNEMNPNGGILSRIPGLNISTLGLPFYGATADNPYPTTTYTLEYDGFADFPRYPLNVLSD 296
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI--VP 349
+NA+ GI H+ Y LTP+QVA+ I+LP +N Y ++P LPLL P+R I +
Sbjct 297 INAVFGIITVHTQYQYLTPQQVANAILLPTEGVTSN-QYFIIPTAHLPLLDPVRAIPVIG 355
Query 350 EPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
PL LIEPDLR ++ LGY R GY A+VPTP LFP
Sbjct 356 PPLAALIEPDLRVLVNLGYGDPRFGYSTSPANVPTPFGLFP 396
>gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacterium marinum M]
gi|183177617|gb|ACC42727.1| PE family protein [Mycobacterium marinum M]
Length=588
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 198/430 (47%), Positives = 264/430 (62%), Gaps = 41/430 (9%)
Query 4 VFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQEFQ 63
+ A P+ + ATA+++A +G A+++A A A PTT + AAAADEVS AIA LF + Q +Q
Sbjct 4 LLASPQAMTATATEVAEIGLAINQADLAVAGPTTGLAAAAADEVSEAIATLFDNYAQGYQ 63
Query 64 ALSAQASAFHDRFVRALSAAAGWYVDAEAANAALV------------------DTAATGA 105
A+S QA+AFHD F + L AA+ YV AEAA + ++ A A
Sbjct 64 AVSRQAAAFHDAFAQTLFAASDSYVRAEAAAVKALAGLTEPVANLFAPVLSGPESVAASA 123
Query 106 SELGSGG-----RTALILGSTGTPRPPFDYMQQVYDRYIAPHY-LGYAFSGLYTPAQFQP 159
+ L SG ALIL +G P P Y+ VY +Y+ P++ A G+ TP P
Sbjct 124 TALLSGAPLKPVEAALILSESGVPTPSASYISDVYTKYVEPNFPSATAPQGVSTPNGLYP 183
Query 160 WTGIPSLTYDQSVAEGAGYLHTAIMQQVAA---GNDVVVLGFSQGASVATLEMRHLASLP 216
+TGI LT D S+A GA L+ AI+QQ+AA G+ V VLG+SQ A +++L M L L
Sbjct 184 FTGIKDLTLDISLARGATILNDAILQQLAALPAGSSVAVLGYSQSAVLSSLVMPKL--LA 241
Query 217 AGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYD 276
GV S Q++FVLLGNP NPNGG+LARFP L L SLG TF GATPD + T YT +YD
Sbjct 242 EGVTSS--QVNFVLLGNPMNPNGGVLARFPDLTLPSLGFTFYGATPDNAFPTVSYTLEYD 299
Query 277 GFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNE 336
GFADFP+YP+N+LAD+NA++GI + H+ Y LT Q+ S + LP P T +TY ++P E
Sbjct 300 GFADFPRYPINLLADINAVMGIPFVHADYQHLTQAQLDSAVQLPTEGP-TQSTYYMIPTE 358
Query 337 DLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYD------RTGYADVPTPAALFPVHID 388
LPLL PLR I V +PL +L+EP+LR ++ LGY TG A+VPTP LFP +
Sbjct 359 HLPLLAPLRFIPYVGDPLAELLEPNLRVLVNLGYGDPAYGYDTGPANVPTPFGLFP-PVS 417
Query 389 PIAVPPQIGA 398
P+ V + A
Sbjct 418 PLTVAEHLAA 427
>gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacterium marinum M]
gi|183173729|gb|ACC38839.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 197/404 (49%), Positives = 254/404 (63%), Gaps = 25/404 (6%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V A P +AA A++L +G+ALSEATAAAA PTT +L+AAADEVS AIA+L G G
Sbjct 1 MSYVVAQPPAIAAAATELTGIGSALSEATAAAAGPTTAILSAAADEVSTAIAQLLGTFGA 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN-AALVDTAATGASELGS--------G 111
E+Q +S Q +AFH + + L+ A +Y++AE N AAL++ A G S
Sbjct 61 EYQGISTQLAAFHAQIAQRLATVANYYINAEEINNAALLEEATAGLYSPNSPPTVPAVFN 120
Query 112 GRTALILGSTGTPRPPFDYMQQV---YDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTY 168
A+ +G TGTP P Y+ V Y ++IAP G L+TP Q P TG+ SL +
Sbjct 121 DYVAIAMGGTGTPIPSTSYLDAVNTLYIQHIAP---GAIAKALFTPEQLYPITGVKSLPF 177
Query 169 DQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSF 228
SV EG L +I ++ AGN V V G+SQ A +A+LEM+H SL AP P Q++F
Sbjct 178 QTSVQEGLKILDISIWNEINAGNHVTVFGYSQSAVIASLEMQHFISLGPN-APDPSQINF 236
Query 229 VLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNI 288
+L GN NPNGGILAR PGL + SLGL F GATPD Y TT YT +YDGFADFP+YPLN+
Sbjct 237 ILTGNEMNPNGGILARIPGLNVASLGLPFYGATPDNPYYTTTYTLEYDGFADFPRYPLNV 296
Query 289 LADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI- 347
L+DVNA+ GI H Y LTPEQ+AS +LP P T TY ++ E+LPLL P+R I
Sbjct 297 LSDVNAVFGILTVHRTYPDLTPEQIASATLLPTEGPTTG-TYYMIRTENLPLLDPVRAIP 355
Query 348 -VPEPLLDLIEPDLRAIIELGYDRTGY------ADVPTPAALFP 384
+ EPL L++PDL+ ++ LGY Y A+VPTP LFP
Sbjct 356 VIGEPLAALVQPDLKVLVNLGYGDPNYGYSTSPANVPTPFGLFP 399
>gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacterium marinum M]
gi|183173740|gb|ACC38850.1| PE family protein [Mycobacterium marinum M]
Length=496
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 196/425 (47%), Positives = 257/425 (61%), Gaps = 36/425 (8%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V PEM+ A+DL +G+A+ A+AA A PTT V AAAADEVS AIA+LFG GQ
Sbjct 1 MSYVITAPEMLTTAATDLDGIGSAIKAASAAVAGPTTGVAAAAADEVSGAIAKLFGMFGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANA--------------ALVDTAATGAS 106
E+Q++ AQASAF F R L+ A Y EA+NA A A T A+
Sbjct 61 EYQSVVAQASAFQTEFTRLLATAGDSYAITEASNALGALNTQAQTLLGGAFGTAAGTSAT 120
Query 107 -ELGSGGRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWT-GIP 164
L +G A ++G T P P Y+ V D +I PH+ G+ L+TP Q P+T +
Sbjct 121 GPLAAGTHVAFVMGGTAIPWPDATYVTAVQDLFIDPHFPGFTTQVLFTPEQLWPFTSNLG 180
Query 165 SLTYDQSVAEGAGYLHTAIMQQVA-AGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSP 223
SLT+ QSVA+G L A+ Q++ N VV G+SQ A++AT ++R S PSP
Sbjct 181 SLTFGQSVAQGVAILRDALSAQLSDPANTAVVFGYSQSATIATNQIRAFMSQLN--PPSP 238
Query 224 DQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFP 282
QLSFVL GNPNNP+GG+L RF GLYL + + FNGAT PD+ Y T IYT QYDG A+FP
Sbjct 239 SQLSFVLTGNPNNPDGGVLERFNGLYLPIVDVLFNGATPPDSPYPTAIYTAQYDGIANFP 298
Query 283 KYPLNILADVNALLGIYYSHSLYYGLTPE--------QVASGIVLPVSSPDT-NTTYILL 333
+YPLN+++DVNA++G Y Y GLT + VA+ + LP S T NT Y ++
Sbjct 299 RYPLNVVSDVNAIMGFLYDEHYYAGLTSDPNAIGSGPTVANAVQLPTSPGYTGNTEYYMV 358
Query 334 PNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTPAALFPVHI 387
+ LPL PLR I V P+ DLI+P LR I++LGY G YAD+PTPA+LF +
Sbjct 359 LGQHLPLTDPLRQIPYVGTPIADLIQPSLRVIVDLGYSDYGPGQNYADIPTPASLFSLP- 417
Query 388 DPIAV 392
+P+AV
Sbjct 418 NPLAV 422
>gi|240173260|ref|ZP_04751918.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=494
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/347 (50%), Positives = 220/347 (64%), Gaps = 13/347 (3%)
Query 59 GQEFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDT-------AATGASELGSG 111
GQ A++A + + + + ++A +G+Y +A A + L + TGA
Sbjct 126 GQNAPAIAATEAEYEQMWAQNVAAMSGYYSNASAVASRLTPWQQLMDGLSTTGAGPAAMA 185
Query 112 GRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQS 171
TAL++G T +P Y+ ++ +IAP + GY GLYTP Q+ P TG+ SLT QS
Sbjct 186 PGTALVMG-TAFLQPTPSYVSRIDQLFIAPFHPGYLAQGLYTPEQYWPLTGLTSLTVGQS 244
Query 172 VAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLL 231
+ + A L+ AIM Q GN +V G+SQ ASVA+LEM+HL +LPAG P+ DQLSFVL
Sbjct 245 MVQSAKVLNDAIMTQ--NGNPTLVFGYSQSASVASLEMQHLLTLPAGQRPTADQLSFVLA 302
Query 232 GNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLNILAD 291
NPN PNGG L RF GLY+ L L F GATP Y TT Y QYD ADFP+YPLN+LAD
Sbjct 303 ANPNRPNGGFLERFHGLYIPILDLPFFGATPANAYPTTDYAIQYDFQADFPQYPLNLLAD 362
Query 292 VNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRG--IVP 349
NA+ G +Y HS Y LTP Q+A+G+V PVS DT T YIL+P DLPLL PLR I+
Sbjct 363 ANAVAGQFYIHSSYPDLTPAQIATGVVQPVSPADTMTKYILIPTHDLPLLNPLRAVPILG 422
Query 350 EPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIAVPPQI 396
PL DL++PDLR ++ELGYDRT Y DVPTPA LFP DP+ V Q+
Sbjct 423 NPLADLVQPDLRVLVELGYDRTAYQDVPTPAGLFP-QFDPLTVAGQL 468
>gi|57116696|ref|YP_177697.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659923|ref|YP_001281446.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|167970280|ref|ZP_02552557.1| PE family protein [Mycobacterium tuberculosis H37Ra]
11 more sequence titles
Length=468
Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 196/402 (49%), Positives = 264/402 (66%), Gaps = 15/402 (3%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V A PEM+A TA+D+ +G+A+ A+A+AA PTT +LAAAADEVS+A A LF + +
Sbjct 1 MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGR------T 114
E Q + QA+AFH F RAL+AA Y AEA+N A + A + LGS G T
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 115 ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAE 174
AL++G TG P + + YI P + YTP Q+ P+ G +L+ DQS+A+
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIAQ 178
Query 175 GAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNP 234
G L+ I ++ G+DVVV G+SQ A+VAT E+R L +LP G AP P +L+F L+GN
Sbjct 179 GVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNI 238
Query 235 NNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFPKYPLNILADVN 293
NNPNGG+L R+ GLYL L ++FNGAT PD+ Y T +YT QYDG+A P+YPLNIL+D+N
Sbjct 239 NNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLN 298
Query 294 ALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNEDLPLLQPLRGI--VPE 350
A +GI + H+ Y T +VA+ + LP S T NT Y + +DLPLLQP+R I V
Sbjct 299 AFMGIRWVHNA-YPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGT 357
Query 351 PLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIAV 392
P+ +LI+PDLR +++LGY GYADVPTPA+LF I+PIAV
Sbjct 358 PIAELIQPDLRVLVDLGYGY-GYADVPTPASLF-APINPIAV 397
>gi|31791337|ref|NP_853830.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636071|ref|YP_976294.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988544|ref|YP_002643231.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616922|emb|CAD93028.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491718|emb|CAL70179.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771657|dbj|BAH24463.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600087|emb|CCC62756.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=468
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 195/402 (49%), Positives = 263/402 (66%), Gaps = 15/402 (3%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V A PEM+A A+D+ +G+A+ A+A+AA PTT +LAAAADEVS+A A LF + +
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGR------T 114
E Q + QA+AFH F RAL+AA Y AEA+N A + A + LGS G T
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 115 ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAE 174
AL++G TG P + + YI P + YTP Q+ P+ G +L+ DQS+A+
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIAQ 178
Query 175 GAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNP 234
G L+ I ++ G+DVVV G+SQ A+VAT E+R L +LP G AP P +L+F L+GN
Sbjct 179 GVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNI 238
Query 235 NNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFPKYPLNILADVN 293
NNPNGG+L R+ GLYL L ++FNGAT PD+ Y T +YT QYDG+A P+YPLNIL+D+N
Sbjct 239 NNPNGGVLERYVGLYLTFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLN 298
Query 294 ALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNEDLPLLQPLRGI--VPE 350
A +GI + H+ Y T +VA+ + LP S T NT Y + +DLPLLQP+R I V
Sbjct 299 AFMGIRWVHNA-YPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGT 357
Query 351 PLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIAV 392
P+ +LI+PDLR +++LGY GYADVPTPA+LF I+PIAV
Sbjct 358 PIAELIQPDLRVLVDLGYGY-GYADVPTPASLF-APINPIAV 397
>gi|298527551|ref|ZP_07014960.1| PE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497345|gb|EFI32639.1| PE family protein [Mycobacterium tuberculosis 94_M4241A]
Length=468
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 194/402 (49%), Positives = 263/402 (66%), Gaps = 15/402 (3%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V A PEM+A A+D+ +G+A+ A+A+AA PTT +LAAAADEVS+A A LF + +
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGR------T 114
E Q + QA+AFH F RAL+AA Y A+A+N A + A + LGS G T
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAQASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 115 ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAE 174
AL++G TG P + + YI P + YTP Q+ P+ G +L+ DQS+A+
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIAQ 178
Query 175 GAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNP 234
G L+ I ++ G+DVVV G+SQ A+VAT E+R L +LP G AP P +L+F L+GN
Sbjct 179 GVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNI 238
Query 235 NNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFPKYPLNILADVN 293
NNPNGG+L R+ GLYL L ++FNGAT PD+ Y T +YT QYDG+A P+YPLNIL+D+N
Sbjct 239 NNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLN 298
Query 294 ALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNEDLPLLQPLRGI--VPE 350
A +GI + H+ Y T +VA+ + LP S T NT Y + +DLPLLQP+R I V
Sbjct 299 AFMGIRWVHNA-YPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGT 357
Query 351 PLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIAV 392
P+ +LI+PDLR +++LGY GYADVPTPA+LF I+PIAV
Sbjct 358 PIAELIQPDLRVLVDLGYGY-GYADVPTPASLF-APINPIAV 397
>gi|148821351|ref|YP_001286105.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253797081|ref|YP_003030082.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254366611|ref|ZP_04982655.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
49 more sequence titles
Length=468
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 195/402 (49%), Positives = 263/402 (66%), Gaps = 15/402 (3%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V A PEM+A A+D+ +G+A+ A+A+AA PTT +LAAAADEVS+A A LF + +
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGR------T 114
E Q + QA+AFH F RAL+AA Y AEA+N A + A + LGS G T
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 115 ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAE 174
AL++G TG P + + YI P + YTP Q+ P+ G +L+ DQS+A+
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIAQ 178
Query 175 GAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNP 234
G L+ I ++ G+DVVV G+SQ A+VAT E+R L +LP G AP P +L+F L+GN
Sbjct 179 GVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNI 238
Query 235 NNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFPKYPLNILADVN 293
NNPNGG+L R+ GLYL L ++FNGAT PD+ Y T +YT QYDG+A P+YPLNIL+D+N
Sbjct 239 NNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLN 298
Query 294 ALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNEDLPLLQPLRGI--VPE 350
A +GI + H+ Y T +VA+ + LP S T NT Y + +DLPLLQP+R I V
Sbjct 299 AFMGIRWVHNA-YPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGT 357
Query 351 PLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIAV 392
P+ +LI+PDLR +++LGY GYADVPTPA+LF I+PIAV
Sbjct 358 PIAELIQPDLRVLVDLGYGY-GYADVPTPASLF-APINPIAV 397
>gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacterium marinum M]
gi|183173728|gb|ACC38838.1| PE family protein [Mycobacterium marinum M]
Length=582
Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 195/432 (46%), Positives = 268/432 (63%), Gaps = 38/432 (8%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
M++VF PE + A+DL +G+ + A+AAAA PT+++++AAADEVS AIA LFG +GQ
Sbjct 1 MTYVFVEPETITTMAADLEGIGSTIDAASAAAAGPTSRLVSAAADEVSTAIAGLFGGYGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTA----ATGASELGSGGR--- 113
++QA+ A A+AFH +F + ++AA Y EA++ A + A T A L GG
Sbjct 61 QYQAVVAHAAAFHQQFTQTVAAAGLAYAQTEASSVAAISNALEAFGTQAHSLLGGGNAAA 120
Query 114 -----------------TALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQ 156
+L++G +G P P DY+ ++ YI P + L+TP Q
Sbjct 121 SATPSASITTTPLTGPTVSLVMGGSGNPLPGPDYLADFFN-YITPQFGVTTSQALFTPEQ 179
Query 157 FQPWTGIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLP 216
P TG SL SV++G LH AI+ Q+A GN VVV G+SQ A +A+LEM++LA++P
Sbjct 180 LYPLTGEKSLPLAISVSQGVQILHNAILGQIAEGNSVVVGGYSQSAIIASLEMQNLAAMP 239
Query 217 AGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATP-DTDYATTIYTTQY 275
G AP+ DQL F+LL NP NPNGG+L+RF GL L SLG+ F G+TP DT Y T+IYT +Y
Sbjct 240 PGTAPTADQLGFLLLANPMNPNGGLLSRFAGLTLPSLGVDFYGSTPADTIYPTSIYTHEY 299
Query 276 DGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASG--IVLPVSSPDT-NTTYIL 332
DGFADFP+YPLNI++D+NA+ GI + H+ + PE + G I L S+ T NT+Y L
Sbjct 300 DGFADFPRYPLNIVSDLNAIAGIAFVHTDTPTINPETLPPGDLIKLDTSADYTGNTSYYL 359
Query 333 LPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYD--RTGY----ADVPTPAALFP 384
+ E LPLL+PLR I V PL DL++PDL I+ LGY R GY A++ TP LFP
Sbjct 360 IHTERLPLLEPLRFIPVVGNPLADLLQPDLTTIVNLGYGDPRYGYSTAPANIETPFGLFP 419
Query 385 VHIDPIAVPPQI 396
+DP V Q+
Sbjct 420 -EVDPKVVAQQL 430
>gi|340625196|ref|YP_004743648.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003386|emb|CCC42506.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=468
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 194/402 (49%), Positives = 263/402 (66%), Gaps = 15/402 (3%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V A PEM+A A+D+ +G+A+ A+A+AA PTT +LAAAADEVS+A A LF + +
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGR------T 114
E Q + QA+AFH F RAL+AA Y AEA+N A + A + LGS G T
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 115 ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAE 174
AL++G TG P + + YI P + YTP Q+ P+ G +L+ DQS+A+
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIAQ 178
Query 175 GAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNP 234
G L+ I ++ G+DVVV G+SQ A+VAT E+R L +LP G AP P +L+F L+GN
Sbjct 179 GVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNI 238
Query 235 NNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFPKYPLNILADVN 293
NNPNGG+L R+ GLYL L ++FNGAT P++ Y T +YT QYDG+A P+YPLNIL+D+N
Sbjct 239 NNPNGGVLERYVGLYLPFLDMSFNGATPPNSPYQTYMYTGQYDGYAHNPQYPLNILSDLN 298
Query 294 ALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNEDLPLLQPLRGI--VPE 350
A +GI + H+ Y T +VA+ + LP S T NT Y + +DLPLLQP+R I V
Sbjct 299 AFMGIRWVHNA-YPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGT 357
Query 351 PLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIAV 392
P+ +LI+PDLR +++LGY GYADVPTPA+LF I+PIAV
Sbjct 358 PIAELIQPDLRVLVDLGYGY-GYADVPTPASLF-APINPIAV 397
>gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=560
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 197/405 (49%), Positives = 262/405 (65%), Gaps = 17/405 (4%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
M +V A P+M+A A+DL +G A+ A+AAAA PT+ + AAAADEVSAAIA LFGA+G+
Sbjct 1 MPYVLADPQMMATAAADLERIGVAVGSASAAAAGPTSSLAAAAADEVSAAIANLFGAYGR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGRTALILGS 120
E+QA+ AF F R L+AA Y +EA NAA V + T AS L +G +LI+G
Sbjct 61 EYQAIVNLLKAFQAEFARTLAAAGLVYAQSEATNAATVSASIT-ASPL-TGPTVSLIMGG 118
Query 121 TGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAEGAGYLH 180
+G P P DY+ + + YI+P + L+TP Q P TG SL SV++G LH
Sbjct 119 SGNPTPGIDYVNDLLN-YISPQFGATNAQALFTPEQLYPLTGEKSLPLTTSVSQGVQILH 177
Query 181 TAIMQQVAA-GNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNPNNPNG 239
AI+ +V GN VVV G+SQ A +A+LEMR+LA++P G AP D+L FVLL NP NPNG
Sbjct 178 NAILSEVNTLGNSVVVGGYSQSAIIASLEMRNLAAMPPGTAPPADRLGFVLLANPMNPNG 237
Query 240 GILARFPGLYLQSLGLTFNGATP-DTDYATTIYTTQYDGFADFPKYPLNILADVNALLGI 298
G+L+RF GL L SLG+ F GATP DT Y T+IYT +YDGFADFP+YPLNI++D+NA+ GI
Sbjct 238 GLLSRFAGLSLPSLGVEFFGATPADTIYPTSIYTHEYDGFADFPRYPLNIVSDLNAIAGI 297
Query 299 YYSHSLYYGLTPEQVASGIVLPVSSPDT---NTTYILLPNEDLPLLQPLRGI--VPEPLL 353
+ H+ + P+ + G ++ + + T NT+Y ++ LPLL PLR I + PL
Sbjct 298 AFVHTDTPEINPQTLPPGDLIKLPTEPTYNGNTSYYIIRTHHLPLLTPLRFIPVLGNPLA 357
Query 354 DLIEPDLRAIIELGYD--RTGY----ADVPTPAALFPVHIDPIAV 392
DL+EP+L I+ LGY R GY A+VPTP LFP +DP V
Sbjct 358 DLVEPNLTTIVNLGYGDPRYGYSTAPANVPTPFGLFP-EVDPAVV 401
>gi|15839539|ref|NP_334576.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|13879650|gb|AAK44390.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|323717147|gb|EGB26356.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=468
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 194/402 (49%), Positives = 262/402 (66%), Gaps = 15/402 (3%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V A PEM+A A+D+ +G+A+ A+A+AA PTT +LAAAADEVS+A A LF + +
Sbjct 1 MSYVIAAPEMLATAAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYAR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASELGSGGR------T 114
E Q + QA+AFH F RAL+AA Y AEA+N A + A + LGS G T
Sbjct 61 ECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLT 120
Query 115 ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQSVAE 174
AL++G TG P + + YI P + YTP Q+ P+ G +L+ DQS+A+
Sbjct 121 ALMMGGTGEPILSDRVLAIIDSAYIRPIFGPNNPVAQYTPEQWWPFIG--NLSLDQSIAQ 178
Query 175 GAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSFVLLGNP 234
G L+ I ++ G+DVVV G+SQ A+VAT E+R L +LP G AP P +L+F L+GN
Sbjct 179 GVTLLNNGINAELQNGHDVVVFGYSQSAAVATNEIRALMALPPGQAPDPSRLAFTLIGNI 238
Query 235 NNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGFADFPKYPLNILADVN 293
NNPNGG+L R+ GLYL L ++FNGAT PD+ Y T +YT QYDG+A P+YPLNIL+D+N
Sbjct 239 NNPNGGVLERYVGLYLPFLDMSFNGATPPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLN 298
Query 294 ALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNEDLPLLQPLRGI--VPE 350
A +GI + H+ Y T +VA+ + LP S T NT Y + +DLPLLQP+R I V
Sbjct 299 AFMGIRWVHNA-YPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGT 357
Query 351 PLLDLIEPDLRAIIELGYDRTGYADVPTPAALFPVHIDPIAV 392
P+ +LI+PDL +++LGY GYADVPTPA+LF I+PIAV
Sbjct 358 PIAELIQPDLWVLVDLGYGY-GYADVPTPASLF-APINPIAV 397
>gi|240168172|ref|ZP_04746831.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=493
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 191/421 (46%), Positives = 251/421 (60%), Gaps = 32/421 (7%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS++ PEMV+A A+DL + AAL A AAAA PTT +LAAA DEVS A+A LFGA GQ
Sbjct 1 MSYLLTAPEMVSAAATDLDGIAAALYAANAAAAGPTTGLLAAAEDEVSRAVATLFGAFGQ 60
Query 61 EFQALSAQASAFHDRFVR---------------ALSAAAGWYVDAEAANAALVDTAATGA 105
E+QA+ A+AFH F R A +A + + + L+ GA
Sbjct 61 EYQAVVTHAAAFHTEFTRALAAAASAYAQAEATASNALSAFGTQVQTLLTPLLPNGGAGA 120
Query 106 ----SELGSGGRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWT 161
S G + A I+G TG P P Y+ +I P + GY + L+TP QF P T
Sbjct 121 INPPSITSLGTQVAFIMGGTGIPDPDAMYVTGAQTLFIQPRFPGYLSNALHTPEQFWPTT 180
Query 162 -GIPSLTYDQSVAEGAGYLHTAIMQQVA-AGNDVVVLGFSQGASVATLEMRHLASLPAGV 219
+ +LT+ +SVAEG L A+ Q++ AGN VV G+SQ A++AT+E+RHL +
Sbjct 181 PNLGNLTFGRSVAEGVAILSNALTTQLSTAGNSAVVYGYSQSAAIATIEIRHL--MAQVT 238
Query 220 APSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTIYTTQYDGF 278
PSP L FVL GNPNNPNGG+L RF GLY+ L + FNGAT PD+ Y T IYT QYDG
Sbjct 239 PPSPSDLGFVLTGNPNNPNGGVLQRFTGLYVPVLDVLFNGATPPDSPYPTVIYTNQYDGT 298
Query 279 ADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTTYILLPNED 337
+FP+YPLN+LAD+NA++GI Y GL P+QVA+ + LP S + NT Y L +
Sbjct 299 GNFPQYPLNLLADLNAVIGIVDGTHYYVGLPPDQVANAVHLPTSPGYSGNTEYFLGLTQK 358
Query 338 LPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTPAALFPVHIDPIA 391
LPL +R I V PL +L++PDLR +++LGY G YAD+PTPA+ V +P A
Sbjct 359 LPLTSLIRPIPYVGTPLAELVQPDLRVLVDLGYSDYGPGLSYADIPTPASFLSVP-NPFA 417
Query 392 V 392
V
Sbjct 418 V 418
>gi|183980415|ref|YP_001848706.1| PE family protein, PE4 [Mycobacterium marinum M]
gi|183173741|gb|ACC38851.1| PE family protein, PE4 [Mycobacterium marinum M]
Length=505
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 194/433 (45%), Positives = 259/433 (60%), Gaps = 46/433 (10%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V P+++A+ A+D+ + A L A +AAA PT+ +LAAA DEVSAAIA++F A+GQ
Sbjct 1 MSYVLTAPDLLASAATDVDGIAATLQVANSAAAAPTSGLLAAAQDEVSAAIAKVFSAYGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGA--------------- 105
E+QA AQASAFH F RAL+AA Y AEAANA+L+ + A
Sbjct 61 EYQAAIAQASAFHTEFTRALAAAGAAYAQAEAANASLITAGVSDALTAITTPIQSLLGPA 120
Query 106 -----------------SELGSGGRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAF 148
S L + ALI+G T P P Y+ + + YI P + G
Sbjct 121 AIGTGGAGSAGALTAVSSTLMADPVVALIMGGTSVPLPGPGYVSDINNNYIQPLFSGAIP 180
Query 149 SGLYTPAQFQPWT-GIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATL 207
L+TP QF P T G+ +LT++QSVA+G L+ AI Q+A GN VV G+SQ A++
Sbjct 181 QALFTPEQFWPVTPGLGNLTFNQSVAQGVTLLNDAINTQLALGNKVVAFGYSQSATIVNN 240
Query 208 EMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTD-Y 266
E+ L ++ G AP P LSF+++G PNNP+GG+LARFPG Y+ L ++FNGATP + Y
Sbjct 241 EILALMAMGTG-APDPGDLSFIMVGAPNNPDGGLLARFPGFYIPFLDVSFNGATPAANPY 299
Query 267 ATTIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT 326
T+I+T QYDG A P+YPLNIL+D+NA++G +Y H Y L Q I LP S T
Sbjct 300 PTSIFTAQYDGIAHAPQYPLNILSDINAIMGYFYVHGNYPDLMSGQ---AIQLPTSPGYT 356
Query 327 -NTTYILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTP 379
NT Y + +DLPL+QP+R I PL DLI+P LR +++LGY G YADVPTP
Sbjct 357 GNTDYYMYLTQDLPLVQPIRDIPYAGPPLADLIQPQLRVLVDLGYSDYGPGLSYADVPTP 416
Query 380 AALFPVHIDPIAV 392
A L V +P AV
Sbjct 417 AGLLSVP-NPFAV 428
>gi|240168169|ref|ZP_04746828.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=495
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 203/445 (46%), Positives = 266/445 (60%), Gaps = 44/445 (9%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS V PEMVA A+D+A + +A+S A AAAA P + VLAAA DEVS AIA LF A+G
Sbjct 1 MSHVLTAPEMVATAATDVAGIRSAISMANAAAAAPVSGVLAAAGDEVSTAIARLFSAYGL 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAE---------------AANAALVDTAATGA 105
E+QA+ QA+AFH F AL+AAA Y +AE A NA + +
Sbjct 61 EYQAVMEQAAAFHADFTAALAAAASAYAEAEAAGAALLSRASNGLGAVNAPIRTLLGSTP 120
Query 106 SELGSGGR-------------TALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLY 152
+ GS G TALI+G T P P Y+ + + YI P + G GL+
Sbjct 121 AGTGSSGALASMMKLAAVDPLTALIMGGTDNPLPDPAYVTAINNAYIQPRFPGAVPQGLF 180
Query 153 TPAQFQPWTGIPSLTYDQSVAEGAGYLHTAIMQQVAA-GNDVVVLGFSQGASVATLEMRH 211
TP QF P TG +LT+ QSVA+G L++ I Q+ GN VVV G+SQ A++AT E+
Sbjct 181 TPEQFWPITG--TLTFGQSVAQGVTLLNSEIDHQINTLGNSVVVFGYSQSAAIATNEINA 238
Query 212 LASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYATTI 270
L A AP QLSFVL NPNNP+GGILARFPG Y+ L + F GAT P++ Y T++
Sbjct 239 LM---AAGAPYTGQLSFVLASNPNNPDGGILARFPGFYIPFLDVPFTGATPPNSPYPTSM 295
Query 271 YTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTT 329
YT QY+G A+ P+YPL++L+DVNA++G +Y H Y LT QV + LP S T NT
Sbjct 296 YTIQYEGVANAPQYPLHVLSDVNAVMGYFYLHDTYQHLTAAQVGGALPLPTSPGYTGNTQ 355
Query 330 YILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTPAALF 383
Y +L ++LPL+QP+R I + PL DLI+PDLR +++LGY G YA+VPTPA L
Sbjct 356 YYMLLTQNLPLVQPIRDIPYLGPPLADLIQPDLRVLVDLGYGNIGVGADYANVPTPARLV 415
Query 384 PVHIDPIAVPPQIGA-AIGGPLTAL 407
+ IDP +V + A+ GP AL
Sbjct 416 QL-IDPFSVGFNLAKGAVQGPQAAL 439
>gi|183980413|ref|YP_001848704.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183173739|gb|ACC38849.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=493
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 186/421 (45%), Positives = 251/421 (60%), Gaps = 43/421 (10%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V +PE ++ A+D+ +G+AL++A++AAA PTT +LAAAADEVSA ++++FG +G
Sbjct 1 MSYVRTIPEFLSTAAADIGGIGSALTDASSAAAGPTTNLLAAAADEVSAVVSKVFGGYGL 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASE------------L 108
QA+ QASAFHD F L+ A G Y AE NA + A SE +
Sbjct 61 SAQAVLTQASAFHDEFTELLANAGGIYAQAEVDNAEALTNAVGEFSEPFIQLWDPSYTYV 120
Query 109 GSGGRT---------------ALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYT 153
GS T ALI+G T P+P Y+ + + +I P + G GL
Sbjct 121 GSNIATGPNPQPNEPSLTPEFALIMGGTFDPQPFPLYVTTINNAFIQPFFPGATSVGLSY 180
Query 154 PAQFQPWTGIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLA 213
PAQF P T LT +QSVAEG L+ A+ Q+ G V+ GFSQ A VAT EM+ L
Sbjct 181 PAQFWPLTS--GLTLNQSVAEGVIDLNNALSVQINGGQHVINFGFSQSAVVATQEMQRLM 238
Query 214 SLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGL-TFNGATPDTDYATTIYT 272
+LP G+ P P LSFVL GNP PNGGI RFPG+++ + L + PDT Y TTIY
Sbjct 239 ALPVGMRPDPSDLSFVLAGNPATPNGGIFTRFPGMHIPFVDLTFTSPTPPDTPYPTTIYA 298
Query 273 TQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT--NTTY 330
TQYD +DFP+YPLNIL+D+N L+ + H LY L V++ + LP +SPD NTTY
Sbjct 299 TQYDPTSDFPRYPLNILSDLNTLMSL-GQHELYPNL---DVSNAVQLP-TSPDYTGNTTY 353
Query 331 ILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTPAALFP 384
+ ++LPLL+P+R I + P+ D I+PDLR +++LGY G YA+VPTPA LFP
Sbjct 354 YMFMTKNLPLLEPVRAIPFIGNPIADFIQPDLRVLVDLGYSDWGSGQDYANVPTPATLFP 413
Query 385 V 385
+
Sbjct 414 I 414
>gi|57117005|ref|YP_177893.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148662448|ref|YP_001283971.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823802|ref|YP_001288556.1| PPE family protein [Mycobacterium tuberculosis F11]
39 more sequence titles
Length=580
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/306 (55%), Positives = 204/306 (67%), Gaps = 7/306 (2%)
Query 109 GSGGRTALILGSTGTPRPPFDYMQQVYD-RYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
G G TAL++G T + P + Y R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 264 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 323
Query 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 324 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 383
Query 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 384 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 442
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 443 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 501
Query 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VHIDPIAVPPQIGAAIGGPL 404
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+ G
Sbjct 502 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQGVN 560
Query 405 TALDGL 410
AL GL
Sbjct 561 DALSGL 566
>gi|15842148|ref|NP_337185.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13882433|gb|AAK46999.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|323718805|gb|EGB27962.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=580
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/306 (55%), Positives = 204/306 (67%), Gaps = 7/306 (2%)
Query 109 GSGGRTALILGSTGTPRPPFDYMQQVYD-RYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
G G TAL++G T + P + Y R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 264 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 323
Query 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 324 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 383
Query 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 384 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 442
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 443 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 501
Query 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VHIDPIAVPPQIGAAIGGPL 404
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+ G
Sbjct 502 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQGVN 560
Query 405 TALDGL 410
AL GL
Sbjct 561 DALSGL 566
>gi|289751233|ref|ZP_06510611.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289691820|gb|EFD59249.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=547
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/306 (55%), Positives = 204/306 (67%), Gaps = 7/306 (2%)
Query 109 GSGGRTALILGSTGTPRPPFDYMQQVYD-RYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
G G TAL++G T + P + Y R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 231 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 290
Query 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 291 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 350
Query 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 351 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 409
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 410 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 468
Query 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VHIDPIAVPPQIGAAIGGPL 404
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+ G
Sbjct 469 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQGVN 527
Query 405 TALDGL 410
AL GL
Sbjct 528 DALSGL 533
>gi|240168173|ref|ZP_04746832.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=502
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 189/431 (44%), Positives = 265/431 (62%), Gaps = 45/431 (10%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+VFA PE++A+ A+D+ + AA+ A+ AAA PT+ +LAAA DEVSAA A LF A+ Q
Sbjct 1 MSYVFAAPELLASAAADVDGIAAAIGAASVAAAGPTSNLLAAAGDEVSAATAALFNAYAQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYV-------------------DAEAANAALVDTA 101
E+QA+ QA+AF F R L+ AAG Y +A A A + +
Sbjct 61 EYQAVVRQAAAFQQEFTRTLAVAAGAYAQAEAANAALLNGALNGALSNARTAVTAPIQSL 120
Query 102 ATGASELGSGG------------RTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFS 149
T A +G+GG + ALI+G TG P P Y+ ++ +YI + G
Sbjct 121 LTSAG-VGTGGPSALTAVPAAASQIALIMGGTGNPDPDPKYLNRINVKYIQHLFPGAIPK 179
Query 150 GLYTPAQFQPWT-GIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLE 208
L+TP QF P T + ++T++QSVA+G L+ AI Q+A GN VV G+SQ A++ E
Sbjct 180 ALFTPEQFWPVTPQLGNMTFNQSVAQGVTALNNAINAQIALGNKVVAFGYSQSATIVNNE 239
Query 209 MRHLASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGAT-PDTDYA 267
+ L S AG AP + +SFV++GNPN P+GGIL+RFPG Y+ L + FNGAT P++ YA
Sbjct 240 INALIS--AG-APHANDISFVMIGNPNTPDGGILSRFPGFYIPFLDVPFNGATPPNSPYA 296
Query 268 TTIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT- 326
TTIYT QYDG A+ P+YPLNIL+D+NA +G +Y H+ Y L+ ++A+ + LP +SP
Sbjct 297 TTIYTAQYDGIANAPRYPLNILSDINAFMGYFYVHNTYPTLSASEIANAVPLP-TSPGYA 355
Query 327 -NTTYILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG--YADVPTPAA 381
NT Y +L +DLPL+QP+R I P+ DL +P LR +++LGY G YA+VPTPA
Sbjct 356 GNTQYYMLLTQDLPLVQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPNYANVPTPAG 415
Query 382 LFPVHIDPIAV 392
L + +P AV
Sbjct 416 LLSIP-NPFAV 425
>gi|31793793|ref|NP_856286.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121638495|ref|YP_978719.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990989|ref|YP_002645676.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
8 more sequence titles
Length=580
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/309 (55%), Positives = 205/309 (67%), Gaps = 13/309 (4%)
Query 109 GSGGRTALILGSTGT----PRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIP 164
G G TAL++G T + P P + + R+I P + GY + L TP+QF P+TG+
Sbjct 264 GGPGVTALVMGGTDSLLSLPNIP---LLEYAARFITPVHPGYTATFLETPSQFFPFTGLN 320
Query 165 SLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPD 224
SLTYD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D
Sbjct 321 SLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLD 380
Query 225 QLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKY 284
+LSF L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKY
Sbjct 381 ELSFTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKY 439
Query 285 PLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPL 344
PLN+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PL
Sbjct 440 PLNVFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPL 498
Query 345 RGI--VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VHIDPIAVPPQIGAAIG 401
R I + PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+
Sbjct 499 RAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQ 557
Query 402 GPLTALDGL 410
G AL GL
Sbjct 558 GVNDALSGL 566
>gi|340627626|ref|YP_004746078.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005816|emb|CCC44982.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=580
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/306 (55%), Positives = 204/306 (67%), Gaps = 7/306 (2%)
Query 109 GSGGRTALILGSTGTPRPPFDYMQQVYD-RYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
G G TAL++G T + P + Y R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 264 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 323
Query 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 324 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 383
Query 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 384 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 442
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 443 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 501
Query 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VHIDPIAVPPQIGAAIGGPL 404
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+ G
Sbjct 502 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQGVN 560
Query 405 TALDGL 410
AL GL
Sbjct 561 DALSGL 566
>gi|308378398|ref|ZP_07482454.2| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308352711|gb|EFP41562.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length=529
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/306 (55%), Positives = 204/306 (67%), Gaps = 7/306 (2%)
Query 109 GSGGRTALILGSTGTPRPPFDYMQQVYD-RYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
G G TAL++G T + P + Y R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 213 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 272
Query 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 273 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 332
Query 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 333 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 391
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 392 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 450
Query 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VHIDPIAVPPQIGAAIGGPL 404
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+ G
Sbjct 451 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQGVN 509
Query 405 TALDGL 410
AL GL
Sbjct 510 DALSGL 515
>gi|289762782|ref|ZP_06522160.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|289710288|gb|EFD74304.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length=518
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/306 (55%), Positives = 204/306 (67%), Gaps = 7/306 (2%)
Query 109 GSGGRTALILGSTGTPRPPFDYMQQVYD-RYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
G G TAL++G T + P + Y R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 202 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 261
Query 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 262 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 321
Query 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 322 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 380
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 381 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 439
Query 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VHIDPIAVPPQIGAAIGGPL 404
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+ G
Sbjct 440 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQGVN 498
Query 405 TALDGL 410
AL GL
Sbjct 499 DALSGL 504
>gi|118616727|ref|YP_905059.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118568837|gb|ABL03588.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=547
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 193/430 (45%), Positives = 260/430 (61%), Gaps = 41/430 (9%)
Query 4 VFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQEFQ 63
+ A P+ + ATA+++A +G A+++A A A PTT + AAAA EVS AIA LF + Q +Q
Sbjct 6 LLASPQAMTATATEVAEIGLAINQADLAVAGPTTGLAAAAAAEVSEAIATLFDNYAQGYQ 65
Query 64 ALSAQASAFHDRFVRALSAAAGWYVDAEAANAALV------------------DTAATGA 105
A+S Q +AFHD F + L AA+ YV AEAA + ++ A A
Sbjct 66 AVSRQTAAFHDAFAQTLFAASDSYVRAEAAAVKALAGLTEPVANLFAPVLSGPESVAASA 125
Query 106 SELGSGG-----RTALILGSTGTPRPPFDYMQQVYDRYIAPHY-LGYAFSGLYTPAQFQP 159
+ L SG ALIL +G P P Y+ VY +Y+ P++ A G+ TP P
Sbjct 126 TALLSGAPLKPVEAALILSESGVPTPSASYISDVYTKYVEPNFPSATAPQGVSTPNGLYP 185
Query 160 WTGIPSLTYDQSVAEGAGYLHTAIMQQVAA---GNDVVVLGFSQGASVATLEMRHLASLP 216
+TGI L+ D S+A GA L+ AI+QQ+AA G+ V VLG+SQ A +++ M L L
Sbjct 186 FTGIKDLSLDISLARGATILNDAILQQLAALPAGSSVAVLGYSQSAVLSSRVMPKL--LA 243
Query 217 AGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYD 276
GV S Q++FVLLGNP NPNGG+LARFP L L SLG TF GATPD + T YT +YD
Sbjct 244 EGVTSS--QVNFVLLGNPMNPNGGVLARFPDLTLPSLGFTFYGATPDNAFPTVSYTLEYD 301
Query 277 GFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNE 336
GFADFP+YP+N+LAD+NA++GI + H+ Y LT Q+ S + LP P T +TY ++P E
Sbjct 302 GFADFPRYPINLLADINAVMGIPFVHADYQDLTQAQLDSAVQLPTEGP-TQSTYYMIPTE 360
Query 337 DLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYD------RTGYADVPTPAALFPVHID 388
LPLL PLR I V +PL +L+EP+LR ++ GY TG A+VPTP LFP +
Sbjct 361 HLPLLAPLRFIPYVGDPLAELLEPNLRVLVNFGYGDPAYGYDTGPANVPTPFGLFP-PVS 419
Query 389 PIAVPPQIGA 398
P+ V + A
Sbjct 420 PLTVAEHLAA 429
>gi|118616775|ref|YP_905107.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118568885|gb|ABL03636.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=505
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 192/433 (45%), Positives = 257/433 (60%), Gaps = 46/433 (10%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS+V P+++A+ A+D+ + A L A +AAA T+ +LAAA DEVSAAIA++F A+GQ
Sbjct 1 MSYVLTAPDLLASAATDVDGIAATLQVANSAAAALTSGLLAAAQDEVSAAIAKVFSAYGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGA--------------- 105
E+QA AQASAFH F RAL+AA Y AEAANA+L+ + A
Sbjct 61 EYQAAIAQASAFHTEFTRALAAAGAAYAQAEAANASLITAGVSDALTAITTPIQSLLGPA 120
Query 106 -----------------SELGSGGRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAF 148
S L + ALI+G T P P Y+ + + YI P + G
Sbjct 121 AIGTGGAGSAGALTAVSSTLMADPVVALIMGGTSVPLPGPGYVSDINNNYIQPLFSGAIP 180
Query 149 SGLYTPAQFQPWT-GIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATL 207
L+TP QF P T G+ +LT++QSVA+G L+ AI Q+A GN VV G+SQ A++
Sbjct 181 QALFTPEQFWPVTPGLGNLTFNQSVAQGVTLLNDAINTQLALGNKVVAFGYSQSATIVNN 240
Query 208 EMRHLASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTD-Y 266
E+ L ++ G AP P LSF+++G PNNP+GG+LARFPG Y+ L ++FNGATP + Y
Sbjct 241 EILALMAMGTG-APDPGDLSFIMVGAPNNPDGGLLARFPGFYIPFLDVSFNGATPAANPY 299
Query 267 ATTIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT 326
T+I+T QYDG A P+Y LNIL+D+NA++G +Y H Y L Q I LP S T
Sbjct 300 PTSIFTAQYDGIAHAPQYRLNILSDINAIMGYFYVHGNYPDLMSGQ---AIQLPTSPGYT 356
Query 327 -NTTYILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTP 379
NT Y + +DLPL+QP+R I PL DLI+P LR +++LGY G YADVPTP
Sbjct 357 GNTDYYMYLTQDLPLVQPIRDIPYAGPPLADLIQPQLRVLVDLGYSDYGPGLSYADVPTP 416
Query 380 AALFPVHIDPIAV 392
A L V +P AV
Sbjct 417 AGLLSVP-NPFAV 428
>gi|167966667|ref|ZP_02548944.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=346
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/279 (57%), Positives = 192/279 (69%), Gaps = 5/279 (1%)
Query 109 GSGGRTALILGSTGTPRPPFDYMQQVYD-RYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
G G TAL++G T + P + Y R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 30 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 89
Query 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 90 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 149
Query 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 150 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 208
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 209 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 267
Query 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP 384
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP
Sbjct 268 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP 306
>gi|340625188|ref|YP_004743640.1| pe family protein [Mycobacterium canettii CIPT 140010059]
gi|340003378|emb|CCC42498.1| pe family protein [Mycobacterium canettii CIPT 140010059]
Length=550
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 201/418 (49%), Positives = 260/418 (63%), Gaps = 32/418 (7%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS++ A P +VAA A+++A +G+A+S A+AAAA PT+ + AAA DEVSAAIA+LFGA+GQ
Sbjct 1 MSYLIAEPRIVAAAAAEVAGIGSAVSTASAAAAGPTSALAAAAGDEVSAAIAKLFGAYGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDT-----------AATGASELG 109
E+QA+ AQ AFH RF + L+AAA Y DAEAA A+ + AA
Sbjct 61 EYQAVLAQVEAFHSRFHQTLAAAAHTYADAEAAIASTLQNQLAVPAAAPTPAAAAMVPPF 120
Query 110 SGGRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYD 169
T L G TG P PP Y+ Y+ A ++TP + P TG+ SL +
Sbjct 121 PANLTTLFFGPTGIPLPPPSYVDAANMLYVRS---AGALQAVFTPEELYPLTGVRSLVLN 177
Query 170 QSVAEGAGYLHTAIMQQVAA-GNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLSF 228
SV EG +H AIM ++A GN V V G+SQ A +A+LEM LA++ P+ D L+F
Sbjct 178 TSVEEGLTIMHDAIMGELAIPGNTVTVFGWSQSAIIASLEMHRLAAMGPAAPPASD-LNF 236
Query 229 VLLGNPNNPNGGILARFPGLYLQSLGLTFNGATP-DTDYATTIYTTQYDGFADFPKYPLN 287
VL+GN NPNGG+LARFP L L SLGLTF GATP DT Y T IYT +YDGFADFP+YPLN
Sbjct 237 VLVGNEMNPNGGMLARFPDLTLPSLGLTFYGATPSDTIYPTAIYTLEYDGFADFPRYPLN 296
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTT-YILLPNEDLPLLQPLRG 346
I++D+NA+ GI + H+ Y LTP QV LP S T T Y ++ E+LPLLQPLR
Sbjct 297 IISDLNAVAGITFVHTKYLDLTPAQVDGATKLPTSPGYTGVTDYYIIRTENLPLLQPLRA 356
Query 347 --IVPEPLLDLIEPDLRAIIELGYD------RTGYADVPTPAALFPVHIDPIAVPPQI 396
++ +PL DLI+P+L+ I+ LGY T YADV TP L+P VPPQ+
Sbjct 357 VPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWP------DVPPQV 408
>gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacterium marinum M]
gi|183177282|gb|ACC42392.1| PPE family protein [Mycobacterium marinum M]
Length=594
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 177/427 (42%), Positives = 243/427 (57%), Gaps = 43/427 (10%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
M++V P+++ A+D+A + +A+ A AAAA PTT ++AAA DEVS IA+LF A+GQ
Sbjct 1 MTYVITQPDILTTAAADIADIRSAIGVANAAAASPTTAMMAAAGDEVSQLIAKLFSAYGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAANAALVDTAATGASEL------GSGGRT 114
E QA+ A+ FHD F L+AA Y AEAA A + A T S G+ T
Sbjct 61 ECQAVITDAAVFHDHFAATLAAAGSVYTQAEAAGTATLSQALTTLSSPIRALLGGTAAST 120
Query 115 A------------------LILGSTGTPRPPFDYMQQVYDRYIAPHY-LGYAF-SGLYTP 154
+ L++G +G P P Y+ V +++AP++ + A GL+TP
Sbjct 121 SGAMAAAAPMAAAGDPIYTLVVGGSGNPIPSPAYISNVVSKFVAPYFPVDPALVQGLFTP 180
Query 155 AQFQPWTGIPSLTYDQSVAEGAGYLHTAIMQQ-------VAAGNDVVVLGFSQGASVATL 207
AQF TGI +L + SV +G L ++ + +GN V V G SQ A +A+L
Sbjct 181 AQFYIDTGIKTLPLNVSVPQGVAILTNTLVGTNPPYLGLLTSGNTVNVTGDSQSAMIASL 240
Query 208 EMRHLASLPAGVAPSP--DQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTD 265
MR L +G A SP D L+F L GNP NPNGG+ ARFPGL L S+GL F G+TPD
Sbjct 241 VMRALNPTNSGAAGSPYFDDLTFSLFGNPMNPNGGLFARFPGLSLPSMGLDFYGSTPDNS 300
Query 266 YATTIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPD 325
+ T ++T +YDG ADFP+YP+N LAD+NA LGI H Y LTPEQ+ + I L +
Sbjct 301 FPTNVFTLEYDGAADFPRYPINFLADLNAFLGIQSLHGQYPSLTPEQLDTAIPLTNTVGP 360
Query 326 TNTTYILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTGYA------DVP 377
T+T Y ++P+ LPLL P+R I + P+ DLIEPDLR ++ GY Y +VP
Sbjct 361 TSTNYYMIPSPHLPLLDPVRAIPVIGTPIADLIEPDLRYLVNWGYGDPAYGWSTSPPNVP 420
Query 378 TPAALFP 384
TP + P
Sbjct 421 TPFGVLP 427
>gi|340625197|ref|YP_004743649.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003387|emb|CCC42507.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=502
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 183/431 (43%), Positives = 252/431 (59%), Gaps = 45/431 (10%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS++ P+M+A A+ + + + L A AAAA PT +LAAA DEVSAA A LF A+G+
Sbjct 1 MSYLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EFQALSAQASAFHDRFVRAL-----------SAAAGWYVDA-EAANA------ALVDTAA 102
E+QA+ QA+AFH F R L +A A W A + NA L +
Sbjct 61 EYQAVVKQAAAFHSEFTRTLAAAGNAYAHAEAANAAWVSHALDTINAPIRTLLGLAPLSP 120
Query 103 TGASELGSGGR------------TALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSG 150
G+S G+GG TALI+G T P P +Y+ + +I + G G
Sbjct 121 NGSS--GAGGLPSIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQG 178
Query 151 LYTPAQFQPWT-GIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEM 209
L+TP QF P T + +LT++QSV EG L+TA+ Q+A GN VV G+SQ A++
Sbjct 179 LFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALGNKVVAFGYSQSATIIN--- 235
Query 210 RHLASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATP-DTDYAT 268
++ SL A +P+PD +SFV++G+ NNP GG+LARFPG Y+ L + FNGATP ++ Y T
Sbjct 236 NYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPT 295
Query 269 TIYTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-N 327
IYT QYDG A P++PL IL+D+NA +G +Y H+ Y L QV + + LP S T N
Sbjct 296 HIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGN 355
Query 328 TTYILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTPAA 381
T Y + +DLPLLQP+R I P+ DL +P LR +++LGY G YAD+PTPA
Sbjct 356 TQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAG 415
Query 382 LFPVHIDPIAV 392
LF + +P AV
Sbjct 416 LFSIP-NPFAV 425
>gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacterium marinum M]
gi|183176742|gb|ACC41852.1| PE family protein [Mycobacterium marinum M]
Length=549
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 191/419 (46%), Positives = 246/419 (59%), Gaps = 35/419 (8%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
M+F+ A P+++A A + +G+A+ A AA + V AAA DEVSAAIA F AHGQ
Sbjct 1 MAFLVAEPQVMATVAGQVEEIGSAIGVANEFAAGSISGVAAAAGDEVSAAIASFFAAHGQ 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWYVDAEAAN----------AALVDTAATGASELGS 110
+QA++ Q AFH F +AL+ A YV AEAA A A
Sbjct 61 AYQAVAGQVEAFHTEFQQALAQAGNAYVQAEAAGAAALAGALGVPATSAAAPAATIPPFP 120
Query 111 GGRTALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLTYDQ 170
T L++G TG P P ++ + Y+ A GL TP + P TG SLT D
Sbjct 121 ANLTTLVMGGTGIPIPGPGFINLANELYVRS---ANALLGLNTPEELYPLTGTKSLTLDA 177
Query 171 SVAEGAGYLHTAIMQQVAA-GNDVVVLGFSQGASVATLEMRHLASL-PAGVAPSPDQLSF 228
SV+EG L AIM+Q+A GN V V G SQ A +A+LEM+ LA+L PA AP+ QL+F
Sbjct 178 SVSEGLTILDNAIMEQLAIPGNTVTVFGVSQSAVIASLEMQKLAALGPA--APTASQLNF 235
Query 229 VLLGNPNNPNGGILARFPGLYLQSLGLTFNGATP-DTDYATTIYTTQYDGFADFPKYPLN 287
VLLGN NPNGG+LARFP L + SLGLTF G TP DT Y T YT +YDGFADFP+YPLN
Sbjct 236 VLLGNEMNPNGGLLARFPDLSIPSLGLTFYGGTPSDTIYPTANYTLEYDGFADFPRYPLN 295
Query 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTN--TTYILLPNEDLPLLQPLR 345
++D+NA++GI Y H Y LT QV + I L +SP + T+Y +LP E+LPLL+PLR
Sbjct 296 FISDLNAVMGIVYVHPTYLDLTQAQVDNAIPL-ATSPGYSGVTSYYILPTENLPLLEPLR 354
Query 346 GI--VPEPLLDLIEPDLRAIIELGYDRTGY------ADVPTPAALFPVHIDPIAVPPQI 396
I + PL +LI+PDL+ ++ LGY Y AD+ TP LFP VPP +
Sbjct 355 AIPVIGNPLANLIQPDLKVLVNLGYGDPAYGYSTSPADITTPFGLFP------DVPPHV 407
>gi|289441535|ref|ZP_06431279.1| PE family protein [Mycobacterium tuberculosis T46]
gi|289414454|gb|EFD11694.1| PE family protein [Mycobacterium tuberculosis T46]
Length=502
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 178/429 (42%), Positives = 247/429 (58%), Gaps = 41/429 (9%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS + P+M+A A+ + + + L A AAAA PT +LAAA DEVSAA A LF A+G+
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWY---------------------VDAEAANAALVD 99
E+QA+ QA+AFH F R L AA Y + A L
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 100 TAATGASELGSGGR-------TALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLY 152
++GA L + + TALI+G T P P +Y+ + + +I + G GL+
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINNAFIQTLFPGAVSQGLF 180
Query 153 TPAQFQPWT-GIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRH 211
TP QF P T + +LT++QSV EG L+TA+ Q+A N VV G+SQ A++ +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIIN---NY 237
Query 212 LASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATP-DTDYATTI 270
+ SL A +P+PD +SFV++G+ NNP GG+LARFPG Y+ L + FNGATP ++ Y T I
Sbjct 238 INSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 271 YTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTT 329
YT QYDG A P++PL IL+D+NA +G +Y H+ Y L QV + + LP S T NT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 330 YILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTPAALF 383
Y + +DLPLLQP+R I P+ DL +P LR +++LGY G YAD+PTPA LF
Sbjct 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
Query 384 PVHIDPIAV 392
+ +P AV
Sbjct 418 SIP-NPFAV 425
>gi|289568058|ref|ZP_06448285.1| PE family protein [Mycobacterium tuberculosis T17]
gi|289748636|ref|ZP_06508014.1| PE family protein [Mycobacterium tuberculosis T92]
gi|289756224|ref|ZP_06515602.1| PE family protein [Mycobacterium tuberculosis EAS054]
gi|289541811|gb|EFD45460.1| PE family protein [Mycobacterium tuberculosis T17]
gi|289689223|gb|EFD56652.1| PE family protein [Mycobacterium tuberculosis T92]
gi|289696811|gb|EFD64240.1| PE family protein [Mycobacterium tuberculosis EAS054]
Length=502
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 178/429 (42%), Positives = 247/429 (58%), Gaps = 41/429 (9%)
Query 1 MSFVFAVPEMVAATASDLASLGAALSEATAAAAIPTTQVLAAAADEVSAAIAELFGAHGQ 60
MS + P+M+A A+ + + + L A AAAA PT +LAAA DEVSAA A LF A+G+
Sbjct 1 MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR 60
Query 61 EFQALSAQASAFHDRFVRALSAAAGWY---------------------VDAEAANAALVD 99
E+QA+ QA+AFH F R L AA Y + A L
Sbjct 61 EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP 120
Query 100 TAATGASELGSGGR-------TALILGSTGTPRPPFDYMQQVYDRYIAPHYLGYAFSGLY 152
++GA L + + TALI+G T P P +Y+ + + +I + G GL+
Sbjct 121 NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINNAFIQTLFPGAVSQGLF 180
Query 153 TPAQFQPWT-GIPSLTYDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRH 211
TP QF P T + +LT++QSV EG L+TA+ Q+A N VV G+SQ A++ +
Sbjct 181 TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIIN---NY 237
Query 212 LASLPAGVAPSPDQLSFVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATP-DTDYATTI 270
+ SL A +P+PD +SFV++G+ NNP GG+LARFPG Y+ L + FNGATP ++ Y T I
Sbjct 238 INSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHI 297
Query 271 YTTQYDGFADFPKYPLNILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDT-NTT 329
YT QYDG A P++PL IL+D+NA +G +Y H+ Y L QV + + LP S T NT
Sbjct 298 YTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQ 357
Query 330 YILLPNEDLPLLQPLRGI--VPEPLLDLIEPDLRAIIELGYDRTG----YADVPTPAALF 383
Y + +DLPLLQP+R I P+ DL +P LR +++LGY G YAD+PTPA LF
Sbjct 358 YYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLF 417
Query 384 PVHIDPIAV 392
+ +P AV
Sbjct 418 SIP-NPFAV 425
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1162294116864
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40