BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1443c
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608581|ref|NP_215959.1| hypothetical protein Rv1443c [Mycob... 323 5e-87
gi|340626457|ref|YP_004744909.1| hypothetical protein MCAN_14591... 322 2e-86
gi|339298057|gb|AEJ50167.1| hypothetical protein CCDC5180_1330 [... 309 7e-83
gi|111019902|ref|YP_702874.1| hypothetical protein RHA1_ro02911 ... 205 2e-51
gi|226362046|ref|YP_002779824.1| hypothetical protein ROP_26320 ... 204 3e-51
gi|333919997|ref|YP_004493578.1| hypothetical protein AS9A_2331 ... 184 4e-45
gi|311742962|ref|ZP_07716770.1| conserved hypothetical protein [... 152 2e-35
gi|317505906|ref|ZP_07963744.1| hypothetical protein HMPREF9336_... 139 1e-31
gi|169628777|ref|YP_001702426.1| hypothetical protein MAB_1687 [... 136 1e-30
gi|262202765|ref|YP_003273973.1| hypothetical protein Gbro_2867 ... 129 1e-28
gi|118619953|ref|YP_908285.1| hypothetical protein MUL_4927 [Myc... 112 2e-23
gi|319951462|ref|ZP_08025272.1| hypothetical protein ES5_17363 [... 112 2e-23
gi|183980203|ref|YP_001848494.1| hypothetical protein MMAR_0169 ... 111 4e-23
gi|152988267|ref|YP_001346649.1| hypothetical protein PSPA7_1264... 94.7 4e-18
gi|218889869|ref|YP_002438733.1| hypothetical protein PLES_11271... 92.8 1e-17
gi|116051878|ref|YP_789279.1| hypothetical protein PA14_14250 [P... 92.0 2e-17
gi|338530220|ref|YP_004663554.1| hypothetical protein LILAB_0275... 92.0 3e-17
gi|15599042|ref|NP_252536.1| hypothetical protein PA3847 [Pseudo... 90.9 5e-17
gi|296387635|ref|ZP_06877110.1| hypothetical protein PaerPAb_057... 89.4 2e-16
gi|108762269|ref|YP_629430.1| hypothetical protein MXAN_1170 [My... 84.3 5e-15
gi|85373352|ref|YP_457414.1| hypothetical protein ELI_02625 [Ery... 57.0 9e-07
gi|296392872|ref|YP_003657756.1| hypothetical protein Srot_0438 ... 48.1 4e-04
gi|55377621|ref|YP_135471.1| hypothetical protein rrnAC0776 [Hal... 47.0 9e-04
gi|120404484|ref|YP_954313.1| hypothetical protein Mvan_3512 [My... 45.8 0.002
gi|257389152|ref|YP_003178925.1| cyclase/dehydrase [Halomicrobiu... 45.1 0.004
gi|344211703|ref|YP_004796023.1| cyclase/dehydrase [Haloarcula h... 45.1 0.004
gi|322369549|ref|ZP_08044114.1| cyclase/dehydrase [Haladaptatus ... 44.3 0.006
gi|308176104|ref|YP_003915510.1| NAD dependent epimerase/dehydra... 43.9 0.009
gi|284164729|ref|YP_003403008.1| cyclase/dehydrase [Haloterrigen... 43.1 0.013
gi|294506717|ref|YP_003570775.1| hypothetical protein SRM_00902 ... 42.4 0.021
gi|83815800|ref|YP_444861.1| hypothetical protein SRU_0723 [Sali... 42.0 0.034
gi|56751604|ref|YP_172305.1| hypothetical protein syc1595_d [Syn... 41.6 0.035
gi|81301320|ref|YP_401528.1| hypothetical protein Synpcc7942_251... 41.6 0.042
gi|218245476|ref|YP_002370847.1| cyclase/dehydrase [Cyanothece s... 41.2 0.054
gi|289582013|ref|YP_003480479.1| cyclase/dehydrase [Natrialba ma... 40.8 0.064
gi|300710988|ref|YP_003736802.1| hypothetical protein HacjB3_081... 40.8 0.070
gi|257058512|ref|YP_003136400.1| cyclase/dehydrase [Cyanothece s... 40.8 0.075
gi|257051675|ref|YP_003129508.1| cyclase/dehydrase [Halorhabdus ... 39.7 0.17
gi|28976147|gb|AAO64412.1| hypothetical protein [Nodularia spumi... 39.3 0.18
gi|119510505|ref|ZP_01629637.1| hypothetical protein N9414_07666... 39.3 0.21
gi|335437709|ref|ZP_08560478.1| cyclase/dehydrase [Halorhabdus t... 38.5 0.31
gi|336254194|ref|YP_004597301.1| cyclase/dehydrase [Halopiger xa... 38.5 0.35
gi|255325057|ref|ZP_05366163.1| nucleoside-diphosphate sugar epi... 38.1 0.45
gi|108800211|ref|YP_640408.1| hypothetical protein Mmcs_3245 [My... 38.1 0.45
gi|116749835|ref|YP_846522.1| cell division inhibitor SulA [Synt... 38.1 0.48
gi|300781101|ref|ZP_07090955.1| nucleoside-diphosphate sugar epi... 38.1 0.48
gi|342858521|ref|ZP_08715176.1| hypothetical protein MCOL_06586 ... 38.1 0.50
gi|70795058|gb|AAZ08492.1| gram negative bacteria binding protei... 37.0 0.86
gi|227832998|ref|YP_002834705.1| hypothetical protein cauri_1174... 37.0 0.91
gi|288555875|ref|YP_003427810.1| hypothetical protein BpOF4_1434... 37.0 0.93
>gi|15608581|ref|NP_215959.1| hypothetical protein Rv1443c [Mycobacterium tuberculosis H37Rv]
gi|15840901|ref|NP_335938.1| hypothetical protein MT1489 [Mycobacterium tuberculosis CDC1551]
gi|31792637|ref|NP_855130.1| hypothetical protein Mb1478c [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=161
Score = 323 bits (828), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%)
Query 1 VVGYAEPVLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIG 60
+VGYAEPVLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIG
Sbjct 1 MVGYAEPVLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIG 60
Query 61 APIGRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIV 120
APIGRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIV
Sbjct 61 APIGRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIV 120
Query 121 RDRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQG 161
RDRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQG
Sbjct 121 RDRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQG 161
>gi|340626457|ref|YP_004744909.1| hypothetical protein MCAN_14591 [Mycobacterium canettii CIPT
140010059]
gi|340004647|emb|CCC43791.1| hypothetical protein MCAN_14591 [Mycobacterium canettii CIPT
140010059]
Length=161
Score = 322 bits (824), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%)
Query 1 VVGYAEPVLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIG 60
+VGYAEPVLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKG+TVDTVPIG
Sbjct 1 MVGYAEPVLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGITVDTVPIG 60
Query 61 APIGRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIV 120
APIGRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIV
Sbjct 61 APIGRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIV 120
Query 121 RDRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQG 161
RDRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQG
Sbjct 121 RDRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQG 161
>gi|339298057|gb|AEJ50167.1| hypothetical protein CCDC5180_1330 [Mycobacterium tuberculosis
CCDC5180]
Length=154
Score = 309 bits (792), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 153/154 (99%), Positives = 154/154 (100%), Gaps = 0/154 (0%)
Query 8 VLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAW 67
+LIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAW
Sbjct 1 MLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAW 60
Query 68 LRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQ 127
LRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQ
Sbjct 61 LRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQ 120
Query 128 TRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQG 161
TRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQG
Sbjct 121 TRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQG 154
>gi|111019902|ref|YP_702874.1| hypothetical protein RHA1_ro02911 [Rhodococcus jostii RHA1]
gi|110819432|gb|ABG94716.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=152
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/151 (66%), Positives = 118/151 (79%), Gaps = 0/151 (0%)
Query 8 VLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAW 67
++IER SVV AP QVW RVV PEGINDE+RPWMTMS+PRG + +T+D+VP+G P+GRAW
Sbjct 1 MIIERSSVVGAPIGQVWARVVDPEGINDEMRPWMTMSIPRGRESITIDSVPVGEPLGRAW 60
Query 68 LRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQ 127
LRLFG++PFDYD L+IAELEP RRF E STMLSMR+W+HERT+ P D T V DRITF+
Sbjct 61 LRLFGLVPFDYDDLTIAELEPYRRFHEKSTMLSMRRWEHERTLRPFDDGSTGVHDRITFE 120
Query 128 TRAGLRFAAPLIAAGLRALFGHRHRRLQRHF 158
R L P++A L A F HRHRRL RHF
Sbjct 121 PRLPLMPLTPVLARVLGAFFAHRHRRLVRHF 151
>gi|226362046|ref|YP_002779824.1| hypothetical protein ROP_26320 [Rhodococcus opacus B4]
gi|226240531|dbj|BAH50879.1| hypothetical protein [Rhodococcus opacus B4]
Length=152
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/152 (66%), Positives = 117/152 (77%), Gaps = 0/152 (0%)
Query 8 VLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAW 67
++IER SVV AP QVW RVV PEGINDE+RPWMTMS+PRG +T+D+V +G P+GRAW
Sbjct 1 MIIERSSVVGAPIGQVWARVVDPEGINDEMRPWMTMSIPRGQASVTIDSVAVGEPLGRAW 60
Query 68 LRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQ 127
LRLFG++PFDYD L+IAELEPG RF E STMLSMR+W+HERT+ P D T V DRITF+
Sbjct 61 LRLFGLVPFDYDDLTIAELEPGLRFHEKSTMLSMRRWEHERTLRPFDDGSTGVHDRITFE 120
Query 128 TRAGLRFAAPLIAAGLRALFGHRHRRLQRHFA 159
R L P++A L A FGHRHRRL RHF
Sbjct 121 PRLPLVPLTPVLARVLGAFFGHRHRRLARHFG 152
>gi|333919997|ref|YP_004493578.1| hypothetical protein AS9A_2331 [Amycolicicoccus subflavus DQS3-9A1]
gi|333482218|gb|AEF40778.1| hypothetical protein AS9A_2331 [Amycolicicoccus subflavus DQS3-9A1]
Length=152
Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/152 (56%), Positives = 114/152 (75%), Gaps = 0/152 (0%)
Query 8 VLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAW 67
++ ER +++ AP + VW RVV+ +GIN E+RPWMTM + RG +T+D V +G P+GRAW
Sbjct 1 MMFERSAIIDAPIDDVWARVVSADGINYEMRPWMTMKLSRGTGFLTIDDVTVGEPLGRAW 60
Query 68 LRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQ 127
L+LFG +PFDYD L+I +LEPGRRF E STMLSM++W+HERT++P +T V DRITF+
Sbjct 61 LKLFGAVPFDYDDLTIVDLEPGRRFHEKSTMLSMKRWEHERTLSPLPAGRTEVLDRITFE 120
Query 128 TRAGLRFAAPLIAAGLRALFGHRHRRLQRHFA 159
R LR A ++ L+A FGHRHRRLQR+F
Sbjct 121 PRILLRPATVVLKRTLQAFFGHRHRRLQRYFG 152
>gi|311742962|ref|ZP_07716770.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311313642|gb|EFQ83551.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length=158
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/151 (51%), Positives = 104/151 (69%), Gaps = 3/151 (1%)
Query 9 LIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWL 68
++ R+SVV A A+ VW R VT +GI+ ELRPW++M+VP GA G+++D+V +GR+W+
Sbjct 6 VVTRESVVPAAADDVWSRAVTFDGIDHELRPWLSMTVPAGADGLSLDSVVPPHRVGRSWV 65
Query 69 RLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQT 128
R+FGV+P D+D ++IAE+ PGRRF E S M S WQHERTV P D VRD +TF+
Sbjct 66 RMFGVVPVDFDDITIAEVGPGRRFLERSRMFSAPVWQHERTVEPVDDHSCRVRDELTFEP 125
Query 129 RAGLRFAAPLIAAGLRALFGHRHRRLQRHFA 159
R G + AP + ALF HRHRRL H++
Sbjct 126 RRGAGWVAPRVVG---ALFTHRHRRLVAHWS 153
>gi|317505906|ref|ZP_07963744.1| hypothetical protein HMPREF9336_00113 [Segniliparus rugosus ATCC
BAA-974]
gi|316255797|gb|EFV15029.1| hypothetical protein HMPREF9336_00113 [Segniliparus rugosus ATCC
BAA-974]
Length=162
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/150 (45%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
Query 12 RQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLF 71
+ SVV AP ++VW V T EGIN E+ P++ M++P+ +G ++ V G IG+++L LF
Sbjct 10 KTSVVDAPTDKVWALVTTQEGINHEMGPYLKMTMPKAFRGKSIADVAPGTHIGKSFLLLF 69
Query 72 GVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTRAG 131
G +PF +D +++A++EPGR FRE+S M MR W H RT+ P+G KTIV D +T
Sbjct 70 GAVPFGFDDITVAQIEPGRMFREESAMTGMRTWVHHRTLEPDG-AKTIVTDAVTLAPHLP 128
Query 132 LRFAAPLIAAGLRALFGHRHRRLQRHFAQG 161
+ L+A L A F HRHRRLQ +FA
Sbjct 129 IPGLHKLLAKILSAFFAHRHRRLQGYFADA 158
>gi|169628777|ref|YP_001702426.1| hypothetical protein MAB_1687 [Mycobacterium abscessus ATCC 19977]
gi|169240744|emb|CAM61772.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=168
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/159 (45%), Positives = 100/159 (63%), Gaps = 4/159 (2%)
Query 4 YAEPVLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPI 63
+ E + + S + P ++VW+RV T EGINDE+ P+M M++P+ +G ++ V G I
Sbjct 5 HTEEHVFRKVSEIDCPVDKVWERVTTQEGINDEMGPYMKMTMPKQFRGKSIADVTPGTRI 64
Query 64 GRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDR 123
G+++L LFGVLPF +D +++A LEPGR FRE+S M MR W H RT+ P GD KTIV D
Sbjct 65 GKSFLLLFGVLPFGFDDITVARLEPGRMFREESLMTGMRIWVHHRTLEPLGD-KTIVTDE 123
Query 124 ITFQTRAGLRFA---APLIAAGLRALFGHRHRRLQRHFA 159
+T +A + L++ L A F HRHRRL R +
Sbjct 124 VTLAPQAPMGLIPGWGRLLSKILAAFFTHRHRRLSRTLS 162
>gi|262202765|ref|YP_003273973.1| hypothetical protein Gbro_2867 [Gordonia bronchialis DSM 43247]
gi|262086112|gb|ACY22080.1| conserved hypothetical protein [Gordonia bronchialis DSM 43247]
Length=154
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/149 (48%), Positives = 92/149 (62%), Gaps = 1/149 (0%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
+ + SVV A + VW RV + GIN EL P+M M +PR +G TV + +G P+G+ WL
Sbjct 6 VVQTSVVHAQPDAVWDRVASMPGINAELMPYMRMVLPRRHRGKTVADIEVGVPVGKVWLL 65
Query 70 LFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTR 129
G LP DYD L+IAEL PG FRE+S+ML+M W+H R +T D T V D + F+ R
Sbjct 66 YGGFLPLDYDNLTIAELVPGSGFREESSMLAMAIWRHTRRLT-TVDGGTEVSDTLEFRPR 124
Query 130 AGLRFAAPLIAAGLRALFGHRHRRLQRHF 158
LR A PL+ + LF HRHRRL HF
Sbjct 125 RVLRPATPLLEWFVGHLFRHRHRRLADHF 153
>gi|118619953|ref|YP_908285.1| hypothetical protein MUL_4927 [Mycobacterium ulcerans Agy99]
gi|118572063|gb|ABL06814.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=168
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/160 (43%), Positives = 99/160 (62%), Gaps = 4/160 (2%)
Query 4 YAEPVLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPI 63
+ + + + S + P E+VWQ V T EGIN E+ P+M M++P+ G ++ V G I
Sbjct 5 HTDEHVFRKVSEIDCPVERVWQTVTTQEGINHEMGPYMKMTMPKQFIGRSIADVEPGTRI 64
Query 64 GRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDR 123
G+++L LFG LPF +D ++I +EPGR FRE+STM MR W H RT+ P+GD KT+V D
Sbjct 65 GKSFLLLFGFLPFGFDDITITRIEPGRMFREESTMTGMRVWVHHRTLEPKGD-KTVVSDE 123
Query 124 ITFQTRAGLRFA---APLIAAGLRALFGHRHRRLQRHFAQ 160
IT +A + L++ L A F HRHRRL++ A+
Sbjct 124 ITLAPQAPMGLIPGWGKLMSKILSAFFAHRHRRLRKSLAK 163
>gi|319951462|ref|ZP_08025272.1| hypothetical protein ES5_17363 [Dietzia cinnamea P4]
gi|319434899|gb|EFV90209.1| hypothetical protein ES5_17363 [Dietzia cinnamea P4]
Length=167
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/142 (43%), Positives = 85/142 (60%), Gaps = 2/142 (1%)
Query 18 APAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFGVLPFD 77
AP +QVW RVVT EG+ DE P +TM PR +G ++ +P+G P GRAW+ L G++P +
Sbjct 25 APRDQVWARVVTAEGVADEFGPLLTMRFPRSLRGASIADLPLGRPAGRAWILLAGIVPVE 84
Query 78 YDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTRAGLRFAAP 137
+D L I +E R F+E S++ S R W+H R + D T V D + + R L P
Sbjct 85 FDDLVITGMEAPRYFQERSSLGSCRVWEHRRELDDLPDGSTRVTDTLRAEPRTVL--PGP 142
Query 138 LIAAGLRALFGHRHRRLQRHFA 159
++ + ALF HRHRRL R F+
Sbjct 143 VVRMVVGALFRHRHRRLIRKFS 164
>gi|183980203|ref|YP_001848494.1| hypothetical protein MMAR_0169 [Mycobacterium marinum M]
gi|183173529|gb|ACC38639.1| conserved protein [Mycobacterium marinum M]
Length=168
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/160 (43%), Positives = 98/160 (62%), Gaps = 4/160 (2%)
Query 4 YAEPVLIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPI 63
+ + + + S + P E+VWQ V T EGIN E+ P+M M++P+ G ++ V G I
Sbjct 5 HTDEHVFRKVSEIDCPVERVWQTVTTQEGINHEMGPYMKMTMPKQFIGRSIADVEPGTRI 64
Query 64 GRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDR 123
G+++L LFG LPF +D ++I +EPGR FRE+STM MR W H RT+ P+GD KT+V D
Sbjct 65 GKSFLLLFGFLPFGFDDITITRIEPGRMFREESTMTGMRVWVHHRTLEPKGD-KTVVSDE 123
Query 124 ITFQTRAGLRFA---APLIAAGLRALFGHRHRRLQRHFAQ 160
IT +A + L++ L A F HRHRRL + A+
Sbjct 124 ITLAPQAPMGLIPGWGKLMSKILSAFFTHRHRRLCKSLAK 163
>gi|152988267|ref|YP_001346649.1| hypothetical protein PSPA7_1264 [Pseudomonas aeruginosa PA7]
gi|150963425|gb|ABR85450.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length=156
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/148 (39%), Positives = 87/148 (59%), Gaps = 6/148 (4%)
Query 13 QSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFG 72
+S + A EQ+W+ + + +GI E+RP ++MSVP G + + V P+ R+ +RLFG
Sbjct 8 ESRLQASPEQLWRWITSVDGILREMRPLLSMSVPPGVRSLADLEVEPRRPLFRSRMRLFG 67
Query 73 VLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTV--TPEGDTKTIVRDRITFQTRA 130
VLP +L++ EL PG+ F E S M MR W+HER + +P G + ++ D++T +
Sbjct 68 VLPLGTSQLTLLELTPGQGFIEQSPMTGMRLWRHERRILPSPGGAGECLLVDQLTVRP-- 125
Query 131 GLRFAAPLIAAGLRALFGHRHRRLQRHF 158
FAA L+ L +F HRHR L R F
Sbjct 126 --LFAAGLVRWFLTRIFRHRHRVLGRQF 151
>gi|218889869|ref|YP_002438733.1| hypothetical protein PLES_11271 [Pseudomonas aeruginosa LESB58]
gi|254236752|ref|ZP_04930075.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126168683|gb|EAZ54194.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|218770092|emb|CAW25854.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
Length=156
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/148 (39%), Positives = 86/148 (59%), Gaps = 6/148 (4%)
Query 13 QSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFG 72
+S + A EQ+W+ + + +GI E+RP ++MSVP G + + V P+ R+ +RLFG
Sbjct 8 ESRLQASPEQLWRWITSVDGILREIRPLLSMSVPPGIRSLEDLEVVPRRPLFRSHMRLFG 67
Query 73 VLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTV--TPEGDTKTIVRDRITFQTRA 130
+LP +L++ EL PGR F E S M MR W+HER + TP + ++ D++T +
Sbjct 68 LLPLGTSQLTLLELTPGRGFIEQSPMTGMRLWRHERRILPTPGEAGECLLVDQLTVRP-- 125
Query 131 GLRFAAPLIAAGLRALFGHRHRRLQRHF 158
FAA L+ L +F HRHR L R F
Sbjct 126 --LFAAGLVRWFLTRIFRHRHRVLCRQF 151
>gi|116051878|ref|YP_789279.1| hypothetical protein PA14_14250 [Pseudomonas aeruginosa UCBPP-PA14]
gi|313109267|ref|ZP_07795235.1| hypothetical protein PA39016_001710076 [Pseudomonas aeruginosa
39016]
gi|115587099|gb|ABJ13114.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|310881737|gb|EFQ40331.1| hypothetical protein PA39016_001710076 [Pseudomonas aeruginosa
39016]
Length=156
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/148 (39%), Positives = 87/148 (59%), Gaps = 6/148 (4%)
Query 13 QSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFG 72
+S + A EQ+W+ + + +GI E+RP ++MSVP G + + V P+ R+ +RLFG
Sbjct 8 ESRLQASPEQLWRWITSVDGILREIRPLLSMSVPPGIRSLEDLEVVPRRPLFRSHMRLFG 67
Query 73 VLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPE-GDT-KTIVRDRITFQTRA 130
+LP +L++ EL PGR F E S M MR W+HER + P G+ + ++ D++T +
Sbjct 68 LLPLGTSQLTLLELTPGRGFIEQSPMTGMRLWRHERRILPAPGEAGECLLVDQLTVRP-- 125
Query 131 GLRFAAPLIAAGLRALFGHRHRRLQRHF 158
FAA L+ L +F HRHR L R F
Sbjct 126 --LFAAGLVRWFLTRIFRHRHRVLCRQF 151
>gi|338530220|ref|YP_004663554.1| hypothetical protein LILAB_02755 [Myxococcus fulvus HW-1]
gi|337256316|gb|AEI62476.1| hypothetical protein LILAB_02755 [Myxococcus fulvus HW-1]
Length=163
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/144 (39%), Positives = 79/144 (55%), Gaps = 5/144 (3%)
Query 13 QSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFG 72
+S V + W V + +GI+ E+ P++ M+ P G G+ G P+ R L L G
Sbjct 9 ESYVEVTPTEAWAWVTSMKGISTEMHPYLRMTAPPGVTGIADLAFEPGMPLFRGRLLLGG 68
Query 73 VLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTRAGL 132
VLP + L++ ELEPGRRF E+S M +MRQW+HER + E + D++ F+
Sbjct 69 VLPVGWTDLTLRELEPGRRFVEESPMSAMRQWRHERRIV-EAHAGVDIIDQLDFEP---- 123
Query 133 RFAAPLIAAGLRALFGHRHRRLQR 156
RF L A +R LF HRH L+R
Sbjct 124 RFGGWLTEAFVRRLFEHRHSVLRR 147
>gi|15599042|ref|NP_252536.1| hypothetical protein PA3847 [Pseudomonas aeruginosa PAO1]
gi|107103366|ref|ZP_01367284.1| hypothetical protein PaerPA_01004436 [Pseudomonas aeruginosa
PACS2]
gi|254242539|ref|ZP_04935861.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|9950024|gb|AAG07234.1|AE004802_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126195917|gb|EAZ59980.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|334841175|gb|EGM19810.1| hypothetical protein PA13_11128 [Pseudomonas aeruginosa 138244]
Length=156
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/148 (38%), Positives = 85/148 (58%), Gaps = 6/148 (4%)
Query 13 QSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFG 72
+S + A EQ+W+ + + +GI E+RP ++MSVP G + + V P+ R+ +RLFG
Sbjct 8 ESRLQASPEQLWRWITSVDGILREIRPLLSMSVPPGIRSLEDLEVVPRRPLFRSHMRLFG 67
Query 73 VLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTV--TPEGDTKTIVRDRITFQTRA 130
+LP +L++ EL PG F E S M MR W+HER + TP + ++ D++T +
Sbjct 68 LLPLGTSQLTLLELTPGHGFIEQSPMTGMRLWRHERRILPTPGEAGECLLVDQLTVRP-- 125
Query 131 GLRFAAPLIAAGLRALFGHRHRRLQRHF 158
FAA L+ L +F HRHR L R F
Sbjct 126 --LFAAGLVRWFLTRIFRHRHRVLCRQF 151
>gi|296387635|ref|ZP_06877110.1| hypothetical protein PaerPAb_05752 [Pseudomonas aeruginosa PAb1]
gi|334836684|gb|EGM15482.1| hypothetical protein PA15_23879 [Pseudomonas aeruginosa 152504]
Length=156
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/148 (38%), Positives = 86/148 (59%), Gaps = 6/148 (4%)
Query 13 QSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFG 72
+S + A EQ+W+ + + +GI E+RP ++MSVP G + + V P+ R+ +RLFG
Sbjct 8 ESRLQASPEQLWRWITSVDGILREIRPLLSMSVPPGIRSLEDLEVVPRRPLFRSHMRLFG 67
Query 73 VLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPE-GDT-KTIVRDRITFQTRA 130
+LP +L++ EL PGR F E M MR W+HER + P G+ + ++ D++T +
Sbjct 68 LLPLGTSQLTLLELTPGRGFIEQWPMTGMRLWRHERRILPAPGEAGECLLVDQLTVRP-- 125
Query 131 GLRFAAPLIAAGLRALFGHRHRRLQRHF 158
FAA L+ L +F HRHR L R F
Sbjct 126 --LFAAGLVRWFLTRIFRHRHRVLCRQF 151
>gi|108762269|ref|YP_629430.1| hypothetical protein MXAN_1170 [Myxococcus xanthus DK 1622]
gi|108466149|gb|ABF91334.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length=141
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/126 (40%), Positives = 72/126 (58%), Gaps = 5/126 (3%)
Query 31 EGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFGVLPFDYDRLSIAELEPGR 90
+GI+ E+ P++ M+ P G + G P+ R+ L L GVLP + +++ ELEPGR
Sbjct 5 KGISTEMHPYLRMTAPPGVARLEDVPFEPGQPLFRSKLLLGGVLPVGWSDVTLRELEPGR 64
Query 91 RFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTRAGLRFAAPLIAAGLRALFGHR 150
RF E+S M +MRQW+HER + E + D++ F+ R G R A I R LF HR
Sbjct 65 RFVEESPMSTMRQWRHERRII-EAHAGVDIIDQLDFEPRFGGRLAEAFI----RRLFEHR 119
Query 151 HRRLQR 156
H L+R
Sbjct 120 HSVLRR 125
>gi|85373352|ref|YP_457414.1| hypothetical protein ELI_02625 [Erythrobacter litoralis HTCC2594]
gi|84786435|gb|ABC62617.1| hypothetical protein ELI_02625 [Erythrobacter litoralis HTCC2594]
Length=156
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/159 (33%), Positives = 71/159 (45%), Gaps = 18/159 (11%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
++ QS +AAP E+VW VT GI E+ P M P + G + L
Sbjct 4 LQFQSRLAAPMERVWSDAVTMRGIAREMPPVARMKGPPEIDDLRASGWAPGRVAVHSKLV 63
Query 70 LFGVLPFDYDRLSIAELEP----GR-RFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRI 124
FG+L L + E+E GR F E S M MR W+H R V + D + IV D +
Sbjct 64 AFGLLRIGSFDLMLTEVEEDLVNGRAHFVEQSQMTGMRSWRHRREVAGD-DAQCIVSDTL 122
Query 125 TFQTRAGLRFAAPLIAAGLRALFG----HRHRRLQRHFA 159
TF+ R L+ RAL G RH+RL+ +
Sbjct 123 TFEPR--------LLPGLSRALIGWFFRQRHKRLRNMYG 153
>gi|296392872|ref|YP_003657756.1| hypothetical protein Srot_0438 [Segniliparus rotundus DSM 44985]
gi|296180019|gb|ADG96925.1| domain of unknown function DUF1731 [Segniliparus rotundus DSM
44985]
Length=452
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/146 (29%), Positives = 63/146 (44%), Gaps = 24/146 (16%)
Query 13 QSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFG 72
SVV AP E+V+ P PW + R A + + P+G W
Sbjct 6 SSVVQAPPEEVFAWFAAPGAAQRLTPPWSGVRFEREADDLADGRAVLRLPLGARWTA--- 62
Query 73 VLPFDYDRLSIAELEPGRRFREDSTMLSMRQ----WQHERTVTPEGDTKTIVRDRITFQT 128
++D A PGR+F ++++ +RQ W+H T TP GD T+V D ++
Sbjct 63 ----EHDP---AGFVPGRQFVDEASSFPVRQLTGGWRHVHTFTPVGDGATLVGDEVS--- 112
Query 129 RAGLRFAAPLIAAGLRALFGHRHRRL 154
FA + LR +F RHR+L
Sbjct 113 ----SFAPGRV---LRPVFAFRHRQL 131
>gi|55377621|ref|YP_135471.1| hypothetical protein rrnAC0776 [Haloarcula marismortui ATCC 43049]
gi|55230346|gb|AAV45765.1| unknown [Haloarcula marismortui ATCC 43049]
Length=161
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/155 (26%), Positives = 64/155 (42%), Gaps = 7/155 (4%)
Query 9 LIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSV--PRGAKGMTVDTVPIGAPIGRA 66
+ ERQ V AP +VW+ T +G+ WM + + RG G + +
Sbjct 3 IYERQVRVEAPLAEVWKFHATGDGLVALTPDWMNIRIEAERGPDGEPNPDELTAGSVVES 62
Query 67 WLRLFGVLPFDYDRLSIAELEPGRR---FREDSTMLSMRQWQHERTVTPEGDTKTIVRDR 123
++ FGV P +I E G FR+ W+H T D +T+V D
Sbjct 63 SIKPFGVPPRQQWVSNIVAREEGEDEAMFRDVMEEGPFPHWEHTHTFRALSDRETLVHDH 122
Query 124 ITFQTRAGL--RFAAPLIAAGLRALFGHRHRRLQR 156
+ F+ G R P G+ +F +RH++ ++
Sbjct 123 VEFELPGGPLGRALGPFGCLGMEPMFRYRHQQTKK 157
>gi|120404484|ref|YP_954313.1| hypothetical protein Mvan_3512 [Mycobacterium vanbaalenii PYR-1]
gi|119957302|gb|ABM14307.1| domain of unknown function DUF1731 [Mycobacterium vanbaalenii
PYR-1]
Length=449
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/158 (30%), Positives = 65/158 (42%), Gaps = 29/158 (18%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
IE +SVV P + VWQ P + + PW MSV A+ + +G P G W+
Sbjct 3 IEYESVVEHPRDDVWQWHARPGAMRRLVPPWQPMSVVSEAESLADGVAVLGLPGGLRWVA 62
Query 70 LFGVLPFDYDRLSIAELEPGRRFREDSTMLS--------MRQWQHERTVTPEGDTKTIVR 121
R AE GRRF ++ + + W+H T + D T V
Sbjct 63 ----------RHDPAEYVAGRRFVDELSSDGPASWPPRVIGGWRHTHTFA-DADGGTRVH 111
Query 122 DRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQRHFA 159
D++ A P AA LR+ F +RHR+L A
Sbjct 112 DQVD--------TAVP--AAALRSTFVYRHRQLADDLA 139
>gi|257389152|ref|YP_003178925.1| cyclase/dehydrase [Halomicrobium mukohataei DSM 12286]
gi|257171459|gb|ACV49218.1| cyclase/dehydrase [Halomicrobium mukohataei DSM 12286]
Length=159
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/155 (27%), Positives = 63/155 (41%), Gaps = 8/155 (5%)
Query 9 LIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSV--PRGAKGMTVDTVPIGAPIGRA 66
+ ER V AP VW+ T +G+ WM + V RG G V + +
Sbjct 3 VYERSVRVDAPLADVWEFHSTGDGLEALTPNWMNLVVEESRGPDGEPDPDVLTEGSVIVS 62
Query 67 WLRLFGVLP---FDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDR 123
+R GV P + + ++ E + FR+ T W H EGD T+V DR
Sbjct 63 SVRPLGVGPRQTWTSEIVAREESDEHAMFRDHMTEGPFAHWLHTHRFVAEGDA-TLVHDR 121
Query 124 ITFQTRAGL--RFAAPLIAAGLRALFGHRHRRLQR 156
+ +Q G + P G +F +RHR ++
Sbjct 122 VEYQFPGGPLGKAVGPFAYVGFEPMFRYRHRTTKQ 156
>gi|344211703|ref|YP_004796023.1| cyclase/dehydrase [Haloarcula hispanica ATCC 33960]
gi|343783058|gb|AEM57035.1| cyclase/dehydrase [Haloarcula hispanica ATCC 33960]
Length=161
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/155 (26%), Positives = 63/155 (41%), Gaps = 7/155 (4%)
Query 9 LIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSV--PRGAKGMTVDTVPIGAPIGRA 66
+ ERQ V AP +VW+ T +G+ WM + + RG G + +
Sbjct 3 VYERQVRVEAPLSEVWKFHATGDGLVALTPDWMNIRIEAERGPDGEPNPEELTAGSVVES 62
Query 67 WLRLFGVLPFDYDRLSIAELEPGRR---FREDSTMLSMRQWQHERTVTPEGDTKTIVRDR 123
++ FGV P +I E G FR+ W+H T D +T+V D
Sbjct 63 SIKPFGVPPRQRWVSNIVAREEGEDEAMFRDVMEEGPFPHWEHTHTFKALSDRETLVHDH 122
Query 124 ITFQTRAGLRFAA--PLIAAGLRALFGHRHRRLQR 156
+ F+ G A P G+ +F +RH++ +
Sbjct 123 VEFELPGGPLGQALGPFGCLGMEPMFRYRHQQTKE 157
>gi|322369549|ref|ZP_08044114.1| cyclase/dehydrase [Haladaptatus paucihalophilus DX253]
gi|320551281|gb|EFW92930.1| cyclase/dehydrase [Haladaptatus paucihalophilus DX253]
Length=151
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/146 (30%), Positives = 64/146 (44%), Gaps = 6/146 (4%)
Query 16 VAAPAEQVWQRVVTPEGINDELRPWMTMSVP--RGAKGMTVDTVPIGAPIGRAWLRLFGV 73
V AP E VW+ T +G+ WM + V RG +G + V R LR F V
Sbjct 3 VDAPFEDVWRFYSTLDGLEALTPGWMNLRVEGIRGPEGESDPDVLGNRTEIRLSLRPFDV 62
Query 74 LPFD--YDRLSIAELEPGR-RFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTRA 130
P ++ E E G FR+ +W+H GD KT+VRD + ++ A
Sbjct 63 GPRQRWVSKIVRREEEDGAAMFRDVMEGGPFPEWEHTHQFY-AGDGKTLVRDVVNYRFPA 121
Query 131 GLRFAAPLIAAGLRALFGHRHRRLQR 156
+PL G +F +RHR+ ++
Sbjct 122 LGEPGSPLAKVGFEPMFRYRHRKTKK 147
>gi|308176104|ref|YP_003915510.1| NAD dependent epimerase/dehydratase family protein [Arthrobacter
arilaitensis Re117]
gi|307743567|emb|CBT74539.1| NAD dependent epimerase/dehydratase family protein [Arthrobacter
arilaitensis Re117]
Length=449
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/151 (27%), Positives = 59/151 (40%), Gaps = 15/151 (9%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
+ R S + A A V+ P I L PW+ + V A + T +G P G W
Sbjct 3 LNRSSQLPASAPVVFDWFSRPGAIQRLLPPWLPLKVMEEATSLKDGTAVLGLPGGLLWNA 62
Query 70 LFGVLPFDYDRLSIAELEP-GRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQT 128
F +R + +LEP G R + +W+HE P G T VRD I
Sbjct 63 KHQPEGFSENRSFVDQLEPEGLR----GIPARVVRWRHEHYFEPAGPESTTVRDCIESN- 117
Query 129 RAGLRFAAPLIAAGLRALFGHRHRRLQRHFA 159
+ + ++ +RHR+L FA
Sbjct 118 ---------MPGRQIESMLAYRHRQLANDFA 139
>gi|284164729|ref|YP_003403008.1| cyclase/dehydrase [Haloterrigena turkmenica DSM 5511]
gi|284014384|gb|ADB60335.1| cyclase/dehydrase [Haloterrigena turkmenica DSM 5511]
Length=165
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/156 (29%), Positives = 69/156 (45%), Gaps = 16/156 (10%)
Query 11 ERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPR--GAKGM-TVDTVPIGAPIGRAW 67
ER++ + AP VW EG+ WM + V G G D + G + +
Sbjct 5 ERRTTIEAPLADVWAFHSRVEGLEAVTPDWMNLRVEAILGPDGEPDPDVLEAGTELALS- 63
Query 68 LRLFGVLPFDYDRLSIAELEPGR---RFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRI 124
+R FGV P + I + E G FR++ +W+H + +G+ +T++RDR+
Sbjct 64 IRPFGVGPRQHWTSLITDRERGDGSASFRDEMVRGPFDRWEHTHSFFADGE-RTVLRDRV 122
Query 125 TFQTR----AGL----RFAAPLIAAGLRALFGHRHR 152
++ AGL AAP G A+F RHR
Sbjct 123 AYELPGSGVAGLGRLTDVAAPFSRVGFEAMFRTRHR 158
>gi|294506717|ref|YP_003570775.1| hypothetical protein SRM_00902 [Salinibacter ruber M8]
gi|294343045|emb|CBH23823.1| conserved hypothetical protein [Salinibacter ruber M8]
Length=962
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/79 (33%), Positives = 39/79 (50%), Gaps = 4/79 (5%)
Query 85 ELEPGRRFREDSTMLSMRQWQHERTVTPEGDTK--TIVRDRITFQTRAGL--RFAAPLIA 140
++EPGR+F + W+H TP D + DRI ++ G R AAP +
Sbjct 572 DVEPGRQFCDRQVQGPFSHWEHTHRFTPADDDTGGATLTDRIEYEPPGGALGRQAAPWLE 631
Query 141 AGLRALFGHRHRRLQRHFA 159
A LR+ F +RHR +R +
Sbjct 632 AELRSQFAYRHRITRRDLS 650
>gi|83815800|ref|YP_444861.1| hypothetical protein SRU_0723 [Salinibacter ruber DSM 13855]
gi|83757194|gb|ABC45307.1| conserved hypothetical protein [Salinibacter ruber DSM 13855]
Length=460
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/78 (34%), Positives = 37/78 (48%), Gaps = 4/78 (5%)
Query 86 LEPGRRFREDSTMLSMRQWQHERTVTPEGDTK--TIVRDRITFQTRAGL--RFAAPLIAA 141
+EPGR+F + W+H TP D + DRI ++ G R AAP + A
Sbjct 71 VEPGRQFCDRQVQGPFSHWEHTHRFTPADDDTGGATLTDRIEYEPPGGALGRQAAPWLEA 130
Query 142 GLRALFGHRHRRLQRHFA 159
LR F +RHR +R +
Sbjct 131 ELRRQFAYRHRITRRDLS 148
>gi|56751604|ref|YP_172305.1| hypothetical protein syc1595_d [Synechococcus elongatus PCC 6301]
gi|56686563|dbj|BAD79785.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length=167
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/146 (25%), Positives = 58/146 (40%), Gaps = 11/146 (7%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
+R +V+ AP E VW + + PW+ + V R G+ P R WL
Sbjct 4 FQRSTVIDAPRELVWAFHEQADVLEQLTPPWLPVEVVRREGGLG----PGAVSEFRLWL- 58
Query 70 LFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTR 129
G +P + + EPGR F + + W H + EGD ++ D + +
Sbjct 59 --GPVPIRWVATHNDDYEPGRCFCDRQSQGPFADWLHRHIFSREGDRTRLI-DEVEYALP 115
Query 130 AGL---RFAAPLIAAGLRALFGHRHR 152
G P++ A L LF +R +
Sbjct 116 GGWLPELSVCPVVDAQLERLFAYRQQ 141
>gi|81301320|ref|YP_401528.1| hypothetical protein Synpcc7942_2511 [Synechococcus elongatus
PCC 7942]
gi|15620543|gb|AAL03927.1|U30252_15 unknown [Synechococcus elongatus PCC 7942]
gi|81170201|gb|ABB58541.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length=167
Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/146 (25%), Positives = 58/146 (40%), Gaps = 11/146 (7%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
+R +V+ AP E VW + + PW+ + V R G+ P R WL
Sbjct 4 FQRSTVIDAPRELVWAFHEQADVLEQLTPPWLPVEVVRREGGLG----PGAVSEFRLWL- 58
Query 70 LFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTR 129
G +P + + EPGR F + + W H + EGD ++ D + +
Sbjct 59 --GPVPIRWVATHNDDYEPGRCFCDRQSQGPFADWLHRHIFSREGDRTRLI-DEVEYALP 115
Query 130 AGL---RFAAPLIAAGLRALFGHRHR 152
G P++ A L LF +R +
Sbjct 116 GGWLPELSVGPVVDAQLERLFAYRQQ 141
>gi|218245476|ref|YP_002370847.1| cyclase/dehydrase [Cyanothece sp. PCC 8801]
gi|218165954|gb|ACK64691.1| cyclase/dehydrase [Cyanothece sp. PCC 8801]
Length=151
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/152 (25%), Positives = 63/152 (42%), Gaps = 14/152 (9%)
Query 12 RQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLF 71
R +++ AP E VWQ P+ + PW + + R G+ V V R WL
Sbjct 6 RSTLINAPIEAVWQFYERPDILQLLTPPWQPVEIIRREGGLAVGAV----SEFRLWL--- 58
Query 72 GVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPE-GDTKTIVRDRITFQTRA 130
G++P + E E F + + M+ W+H E G T+ I D I ++
Sbjct 59 GLIPITWVAYH-TECEKPYLFVDCQKIGPMKSWEHRHYFQDEKGKTRLI--DEINYEIPG 115
Query 131 GL---RFAAPLIAAGLRALFGHRHRRLQRHFA 159
G+ + + L+ +F +RH Q++
Sbjct 116 GIIVEFLIGWWVDSRLQEMFRYRHEVSQKYCC 147
>gi|289582013|ref|YP_003480479.1| cyclase/dehydrase [Natrialba magadii ATCC 43099]
gi|289531566|gb|ADD05917.1| cyclase/dehydrase [Natrialba magadii ATCC 43099]
Length=176
Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/163 (27%), Positives = 66/163 (41%), Gaps = 14/163 (8%)
Query 11 ERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSV-----PRGAKGMTVDTVPI--GAPI 63
ER++ + AP E VW+ T G+ W+ + V P G + +V + G I
Sbjct 5 ERRTTIRAPLESVWEFHSTVAGLEALTPDWLGLRVEAVIGPDGERRGDPQSVTLEAGTEI 64
Query 64 GRAWLRLFGVLPFDYDRLSIAELEPGR---RFREDSTMLSMRQWQHERTVTPEGDTKTIV 120
+ L+ FG P + I E G RFR+ W+H T + + TI+
Sbjct 65 SLS-LQPFGQGPRQHWTSRITERTRGDGIARFRDTMDDGPFEHWEHSHTFAGDDEQTTII 123
Query 121 RDRITFQTRAG--LRFAAPLIAAGLRALFGHRHRRLQRHFAQG 161
DR+ ++ G A P G +F RHR +R G
Sbjct 124 -DRVDYRLPFGPLGTLATPFSVVGFEGMFRQRHRETRRVLETG 165
>gi|300710988|ref|YP_003736802.1| hypothetical protein HacjB3_08125 [Halalkalicoccus jeotgali B3]
gi|299124671|gb|ADJ15010.1| hypothetical protein HacjB3_08125 [Halalkalicoccus jeotgali B3]
Length=157
Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/159 (26%), Positives = 67/159 (43%), Gaps = 25/159 (15%)
Query 11 ERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSV-----PRGA-------KGMTVDTV- 57
ER++ V AP E VW+ G+ WM +S+ P G G +D
Sbjct 5 ERETYVDAPLEDVWEFHSRIAGLEALTPRWMGLSIRAVRGPNGEPDPAVLEAGAEIDMTL 64
Query 58 -PIGAPIGRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDT 116
P+G P G +W + +R S E F+++ +W H + EG+
Sbjct 65 GPLGLP-GDSWTSVI------TERTSSDER---GLFKDEMHGGPFARWVHVHQFSREGE- 113
Query 117 KTIVRDRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQ 155
T +RD + ++ +R +PL G +F +RHR+ +
Sbjct 114 GTKIRDTVHYELPDPVRATSPLAVVGFEPMFRYRHRKTK 152
>gi|257058512|ref|YP_003136400.1| cyclase/dehydrase [Cyanothece sp. PCC 8802]
gi|256588678|gb|ACU99564.1| cyclase/dehydrase [Cyanothece sp. PCC 8802]
Length=151
Score = 40.8 bits (94), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/152 (25%), Positives = 63/152 (42%), Gaps = 14/152 (9%)
Query 12 RQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLF 71
R +++ AP E VWQ P+ + PW + + R G+ V V R WL
Sbjct 6 RSTLINAPIEAVWQFYERPDILQLLTPPWEPVDIIRREGGLAVGAV----SEFRLWL--- 58
Query 72 GVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPE-GDTKTIVRDRITFQTRA 130
G++P + E E F + + M+ W+H E G T+ I D I ++
Sbjct 59 GLIPITWVAYH-TECEKPYLFVDCQKIGPMKSWEHRHYFQDEKGKTRLI--DEINYEIPG 115
Query 131 GL---RFAAPLIAAGLRALFGHRHRRLQRHFA 159
G+ + + L+ +F +RH Q++
Sbjct 116 GIIVEFLIGWWVDSRLQEMFRYRHEVSQKYCC 147
>gi|257051675|ref|YP_003129508.1| cyclase/dehydrase [Halorhabdus utahensis DSM 12940]
gi|256690438|gb|ACV10775.1| cyclase/dehydrase [Halorhabdus utahensis DSM 12940]
Length=163
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/158 (28%), Positives = 64/158 (41%), Gaps = 14/158 (8%)
Query 11 ERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVP--RGAKGMTVDTVPIGAPIGRAWL 68
ER V AP E VW+ T +G++ W+ + RG G I L
Sbjct 5 ERSVHVDAPFEDVWEFHSTIDGLDALTPGWVNLRAESVRGPDGEEDPDEMIVGTTAIVSL 64
Query 69 RLFGVLPFDYDRLSIAELE----PGRR---FREDSTMLSMRQWQH-ERTVTPEGDTKTIV 120
R FGV P I E E GR F ++ + W+H R EG T+ +
Sbjct 65 RPFGVGPRQESTTRIVERERTGGDGRETGYFVDEMSGGPFAHWRHTHRFEAVEGGTR--I 122
Query 121 RDRITFQTRAGL--RFAAPLIAAGLRALFGHRHRRLQR 156
D + ++ G R A+PL G +F +RHR ++
Sbjct 123 TDHVEYRLAGGALGRLASPLAVVGFAPMFRYRHRETKQ 160
>gi|28976147|gb|AAO64412.1| hypothetical protein [Nodularia spumigena]
Length=149
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/151 (30%), Positives = 63/151 (42%), Gaps = 14/151 (9%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
+ SV+ AP E VW+ + + PW + V R G+ V GA R
Sbjct 4 FQHSSVINAPPEVVWKFHERRDILQLLNPPWQPVQVIRREGGLEV-----GATTE---FR 55
Query 70 LF-GVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQT 128
LF G LP + E E R F ++ W H PE + KT + D ++F
Sbjct 56 LFLGPLPLTW-LARHTECEKNRLFIDEQISGPFESWVHRHEFAPE-NGKTKLTDAVSFSM 113
Query 129 RAG--LRFAAP-LIAAGLRALFGHRHRRLQR 156
G + F + LI A L A+F +RH +R
Sbjct 114 PGGATVEFVSGWLIQAQLEAMFRYRHHVTKR 144
>gi|119510505|ref|ZP_01629637.1| hypothetical protein N9414_07666 [Nodularia spumigena CCY9414]
gi|119464848|gb|EAW45753.1| hypothetical protein N9414_07666 [Nodularia spumigena CCY9414]
Length=149
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/151 (30%), Positives = 63/151 (42%), Gaps = 14/151 (9%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
+ SV+ AP E VW+ + + PW + V R G+ V GA R
Sbjct 4 FQHSSVINAPPEVVWKFHERRDILQLLNPPWQPVQVIRREGGLEV-----GATTE---FR 55
Query 70 LF-GVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQT 128
LF G LP + E E R F ++ W H PE + KT + D ++F
Sbjct 56 LFLGPLPLTW-LARHTECEKNRLFIDEQISGPFETWVHRHEFAPE-NGKTKLTDAVSFSM 113
Query 129 RAG--LRFAAP-LIAAGLRALFGHRHRRLQR 156
G + F + LI A L A+F +RH +R
Sbjct 114 PGGGTVEFVSGWLIQAQLEAMFRYRHHVTKR 144
>gi|335437709|ref|ZP_08560478.1| cyclase/dehydrase [Halorhabdus tiamatea SARL4B]
gi|334894987|gb|EGM33171.1| cyclase/dehydrase [Halorhabdus tiamatea SARL4B]
Length=163
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/162 (28%), Positives = 66/162 (41%), Gaps = 18/162 (11%)
Query 9 LIERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVP--RGAKGMT-VDTVPIGAPIGR 65
+ ER V AP E VW T +G++ W+ + RG G +D + +G
Sbjct 3 VYERSVRVDAPFEDVWDFHSTIDGLDALTPGWVNLRAESVRGPDGEDDLDEMIVGT-TAT 61
Query 66 AWLRLFGVLPFDYDRLSIAELE----PGRR---FREDSTMLSMRQWQHER--TVTPEGDT 116
LR FGV P I E E GR+ F ++ + W+H P G
Sbjct 62 VSLRPFGVGPRQESTTRIVERERTDSDGRKTGYFVDEMSGGPFAHWRHTHRFEAVPGG-- 119
Query 117 KTIVRDRITFQTRAGL--RFAAPLIAAGLRALFGHRHRRLQR 156
T + D + +Q G R A+P G +F +RHR ++
Sbjct 120 -TEITDHVEYQLAGGDVGRLASPFAVVGFAPMFRYRHRMTKK 160
>gi|336254194|ref|YP_004597301.1| cyclase/dehydrase [Halopiger xanaduensis SH-6]
gi|335338183|gb|AEH37422.1| cyclase/dehydrase [Halopiger xanaduensis SH-6]
Length=165
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/157 (30%), Positives = 65/157 (42%), Gaps = 16/157 (10%)
Query 11 ERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPR--GAKGM-TVDTVPIGAPIGRAW 67
ER++ V AP E VW G+ WM + V G G D + +G+ + +
Sbjct 5 ERRTRVRAPLEDVWSFHSQVSGLETLTPDWMRLRVESVVGPDGDPDPDVLEVGSEVTLS- 63
Query 68 LRLFGVLPFDYDRLSIAELEPGR---RFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRI 124
+R G P I E E G FR++ +W H +G+ TIVRD +
Sbjct 64 VRPCGAGPRQRWTSVITERERGDGAAYFRDEMVDGPFDEWTHTHAFYADGEA-TIVRDHV 122
Query 125 TFQTRAG-LRFAAPLIAA-------GLRALFGHRHRR 153
+ G L + PL AA G A+F RHRR
Sbjct 123 EYALPLGPLDSSGPLAAAATPFSSLGFEAMFRDRHRR 159
>gi|255325057|ref|ZP_05366163.1| nucleoside-diphosphate sugar epimerase [Corynebacterium tuberculostearicum
SK141]
gi|255297622|gb|EET76933.1| nucleoside-diphosphate sugar epimerase [Corynebacterium tuberculostearicum
SK141]
Length=450
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/149 (26%), Positives = 61/149 (41%), Gaps = 22/149 (14%)
Query 13 QSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFG 72
+ +V AP EQVWQ + P+ M+ + A + T +G P G W
Sbjct 6 EHIVPAPREQVWQWHTRQGALTRLNAPFSFMTPIQQADSLGDGTSILGLPGGLRWTAQHK 65
Query 73 VLPF--DYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTRA 130
+ + Y+ + P R+F WQH T D T+VRD +T TR
Sbjct 66 LSQYREGYEFTDVCVNSPIRKF---------ATWQHHHTFADHPD-GTLVRDEVT--TR- 112
Query 131 GLRFAAPLIAAGLRALFGHRHRRLQRHFA 159
+ +A L+++F +R +L F+
Sbjct 113 -------IPSAALKSVFAYRQHQLIEDFS 134
>gi|108800211|ref|YP_640408.1| hypothetical protein Mmcs_3245 [Mycobacterium sp. MCS]
gi|119869339|ref|YP_939291.1| hypothetical protein Mkms_3307 [Mycobacterium sp. KMS]
gi|126435834|ref|YP_001071525.1| hypothetical protein Mjls_3256 [Mycobacterium sp. JLS]
gi|108770630|gb|ABG09352.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695428|gb|ABL92501.1| domain of unknown function DUF1731 [Mycobacterium sp. KMS]
gi|126235634|gb|ABN99034.1| domain of unknown function DUF1731 [Mycobacterium sp. JLS]
Length=452
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/162 (26%), Positives = 61/162 (38%), Gaps = 34/162 (20%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
IE +S+V P ++V+ P + + PW M+V + +G P G W+
Sbjct 3 IEYESIVDHPIDEVFAWHTRPGAMPRLVPPWQPMTVVAETPSLADGQAVLGLPGGLRWIA 62
Query 70 LFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQ-----------WQHERTVTPEGDTKT 118
P YD P RF + LS R W+H G +T
Sbjct 63 QHD--PAGYD--------PPYRFVD---ALSSRGVMSLPPRVIGWWRHTHDFADAGAGRT 109
Query 119 IVRDRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQRHFAQ 160
+VRDR+ A + LR+ F +RHR+L A
Sbjct 110 LVRDRVDTTVPAAM----------LRSTFVYRHRQLADDLAS 141
>gi|116749835|ref|YP_846522.1| cell division inhibitor SulA [Syntrophobacter fumaroxidans MPOB]
gi|116698899|gb|ABK18087.1| cell division inhibitor SulA [Syntrophobacter fumaroxidans MPOB]
Length=152
Score = 38.1 bits (87), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/96 (33%), Positives = 44/96 (46%), Gaps = 5/96 (5%)
Query 68 LRLFGVLPFDYDRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQ 127
LRLFGV PF + R I+ +P RRF ++ R W+H+ E + T V D + +
Sbjct 58 LRLFGV-PFGW-RTRISAWDPPRRFTDEQLRGPYRVWRHDHLFH-EANGTTTVTDAVRYA 114
Query 128 TRAGL--RFAAPLIAAGLRALFGHRHRRLQRHFAQG 161
PL+ A LR +F RH + R G
Sbjct 115 LPLWPVGEIVHPLVLAQLRRIFRFRHEAVARFLTHG 150
>gi|300781101|ref|ZP_07090955.1| nucleoside-diphosphate sugar epimerase [Corynebacterium genitalium
ATCC 33030]
gi|300532808|gb|EFK53869.1| nucleoside-diphosphate sugar epimerase [Corynebacterium genitalium
ATCC 33030]
Length=445
Score = 38.1 bits (87), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/153 (26%), Positives = 64/153 (42%), Gaps = 24/153 (15%)
Query 10 IERQSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLR 69
I +V AP E+VW+ P + P++ MSV GA+ + T + P G+ W+
Sbjct 3 ITTTHLVPAPLERVWEWHTRPGAVQRLTPPFLPMSVVSGAESLRDGTTVLKLPAGQKWIA 62
Query 70 LFGVLPFDYDRLSIAELEPGRRF---REDSTMLSMRQWQHERTVTPEGDTKTIVRDRITF 126
+ E G +F E++ + QW+H + + D+ T + D T
Sbjct 63 ----------QHVAEEYIEGSQFVDVAENTPVKQATQWKHTH-IFEQADSGTRITD--TV 109
Query 127 QTRAGLRFAAPLIAAGLRALFGHRHRRLQRHFA 159
TR + A L+A F +R R+L A
Sbjct 110 DTR--------VPEAMLKAAFAYRQRQLVEDLA 134
>gi|342858521|ref|ZP_08715176.1| hypothetical protein MCOL_06586 [Mycobacterium colombiense CECT
3035]
gi|342134225|gb|EGT87405.1| hypothetical protein MCOL_06586 [Mycobacterium colombiense CECT
3035]
Length=145
Score = 38.1 bits (87), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/138 (29%), Positives = 57/138 (42%), Gaps = 11/138 (7%)
Query 19 PAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFGVLPFDY 78
PAE PE + L P V R + + + +G G A FGV+P
Sbjct 13 PAETASALARKPELMKHVLSP-----VLRAYRVEIPERIEVGTQ-GSARFWWFGVIPGWT 66
Query 79 DRLSIAELEPGRRFREDSTMLSMRQWQHERTVTPEGDTKTIVRDRITFQTRAGLRFAAPL 138
L+I L+P + + +R W H T P GD D I +T G+ L
Sbjct 67 HHLTIKRLDPTEIYTNEHGG-PVRTWNHRLTFDPIGDRSCRYTDEI--ETDDGVH--GLL 121
Query 139 IAAGLRALFGHRHRRLQR 156
A +R +F HRHRR ++
Sbjct 122 TRAFVRVMFRHRHRRWRK 139
>gi|70795058|gb|AAZ08492.1| gram negative bacteria binding protein 1 [Mastotermes darwiniensis]
Length=379
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/81 (30%), Positives = 38/81 (47%), Gaps = 8/81 (9%)
Query 35 DELRPW-----MTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFGVLPFD--YDRLSIAELE 87
+E PW + +S RG + +T+D + IG I + L PFD D LE
Sbjct 179 NEYGPWPASGEIDLSESRGNRNLTIDGLNIGTEICSSTLHFGPFSPFDGWQDATYRKRLE 238
Query 88 PGRRFREDSTMLSMRQWQHER 108
PG+ F +D + M +W ++
Sbjct 239 PGKGFDQDFHLFQM-EWTNDH 258
>gi|227832998|ref|YP_002834705.1| hypothetical protein cauri_1174 [Corynebacterium aurimucosum
ATCC 700975]
gi|262182514|ref|ZP_06041935.1| hypothetical protein CaurA7_00839 [Corynebacterium aurimucosum
ATCC 700975]
gi|227454014|gb|ACP32767.1| hypothetical protein cauri_1174 [Corynebacterium aurimucosum
ATCC 700975]
Length=465
Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/151 (24%), Positives = 64/151 (43%), Gaps = 28/151 (18%)
Query 13 QSVVAAPAEQVWQRVVTPEGINDELRPWMTMSVPRGAKGMTVDTVPIGAPIGRAWLRLFG 72
Q VV AP E+VWQ P + P+ M+ + A+ + T +G P G W+
Sbjct 6 QHVVPAPREEVWQWHTRPGALARLTAPFGFMTPLQQAESLADGTSILGFPGGLKWVA--- 62
Query 73 VLPFDYDRLSIAELEPGRRFRE---DSTMLSMRQWQHERTVT--PEGDTKTIVRDRITFQ 127
R ++ +P R F + ++ S+ W+HE PEG T++ D++ +
Sbjct 63 -------RHDLSRYQPRRSFADVCINAPFRSLANWRHEHFFEDHPEG---TLITDKVDTR 112
Query 128 TRAGLRFAAPLIAAGLRALFGHRHRRLQRHF 158
G + ++F +R ++L F
Sbjct 113 IPTG----------PVESIFAYRQQQLIEDF 133
>gi|288555875|ref|YP_003427810.1| hypothetical protein BpOF4_14345 [Bacillus pseudofirmus OF4]
gi|288547035|gb|ADC50918.1| hypothetical protein BpOF4_14345 [Bacillus pseudofirmus OF4]
Length=144
Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/157 (23%), Positives = 64/157 (41%), Gaps = 21/157 (13%)
Query 6 EPVLIERQSVVAAPAEQVWQRVVTPEG-INDELRPWMTM-SVPRGAKGMTVDTVPIGAPI 63
+ + ++ V AP E+VW T E + P +T+ S P +G T+ P+
Sbjct 2 DTYIFTYETTVDAPIEEVWSFFRTAENLVKITSFPTITLHSDPETREGNTIRMKMGLGPV 61
Query 64 GRAWLRLFGVLPFDYDRLSIAELEPGRRFREDSTML--SMRQWQHERTVTPEGDTKTIVR 121
G W I E++P F + L ++ W+H + GD+ T++R
Sbjct 62 GSDW------------HSYIQEVKPHEYFVDVGVKLPFPLKSWRHTHSFVKRGDS-TVMR 108
Query 122 DRITFQTRAGLRFAAPLIAAGLRALFGHRHRRLQRHF 158
D + Q+ ++ L +F R ++RHF
Sbjct 109 DNVEIQS----ILPTSILRLALHGMFRGRADAVRRHF 141
Lambda K H
0.324 0.138 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131112251088
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40