BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1450c
Length=1329
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 2113 0.0
gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 2099 0.0
gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 2077 0.0
gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 261 7e-67
gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobac... 259 3e-66
gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacter... 259 3e-66
gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacteri... 259 4e-66
gi|344219282|gb|AEM99912.1| PE-PGRS family protein [Mycobacteriu... 253 1e-64
gi|289442899|ref|ZP_06432643.1| PE domain-containing protein [My... 253 1e-64
gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [... 253 2e-64
gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacteri... 253 2e-64
gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobac... 253 2e-64
gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacteri... 252 3e-64
gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [... 252 3e-64
gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 252 3e-64
gi|253799499|ref|YP_003032500.1| PE-PGRS family protein [Mycobac... 242 5e-61
gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 240 1e-60
gi|297634014|ref|ZP_06951794.1| PE-PGRS family protein [Mycobact... 240 1e-60
gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobac... 205 5e-50
gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 170 2e-39
gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 160 2e-36
gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 149 3e-33
gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 149 4e-33
gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 139 3e-30
gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 139 4e-30
gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 139 4e-30
gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 139 4e-30
gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 139 4e-30
gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 139 4e-30
gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 138 6e-30
gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 138 7e-30
gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 136 2e-29
gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 136 3e-29
gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacteriu... 133 2e-28
gi|183980462|ref|YP_001848753.1| PE-PGRS family protein [Mycobac... 129 4e-27
gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacteri... 129 5e-27
gi|148824718|ref|YP_001289472.1| PE-PGRS family protein [Mycobac... 129 5e-27
gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114... 128 6e-27
gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobac... 128 7e-27
gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacteri... 128 7e-27
gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobac... 128 7e-27
gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacter... 128 7e-27
gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacteriu... 128 7e-27
gi|339299931|gb|AEJ52041.1| PE-PGRS family protein [Mycobacteriu... 128 8e-27
gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacteri... 127 1e-26
gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacter... 127 2e-26
gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobac... 127 2e-26
gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacteri... 127 2e-26
gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacteri... 127 2e-26
gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobac... 127 2e-26
>gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=1329
Score = 2113 bits (5474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1329/1329 (100%), Positives = 1329/1329 (100%), Gaps = 0/1329 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 180
LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 180
Query 181 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 240
AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT
Sbjct 181 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 240
Query 241 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 300
GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA
Sbjct 241 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 300
Query 301 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 360
AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA
Sbjct 301 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 360
Query 361 GDNGGDPGAGGAGGTGGAGSTIGAHGAAGASPTSGGNGGAGGNGAHFSSGGKAGGNGGAG 420
GDNGGDPGAGGAGGTGGAGSTIGAHGAAGASPTSGGNGGAGGNGAHFSSGGKAGGNGGAG
Sbjct 361 GDNGGDPGAGGAGGTGGAGSTIGAHGAAGASPTSGGNGGAGGNGAHFSSGGKAGGNGGAG 420
Query 421 GAGGLVGNGGAGGAGGNGAPGAPPSGGDPNGGGGGAGGAGGKGGDGGAQAGDGGAGGAGG 480
GAGGLVGNGGAGGAGGNGAPGAPPSGGDPNGGGGGAGGAGGKGGDGGAQAGDGGAGGAGG
Sbjct 421 GAGGLVGNGGAGGAGGNGAPGAPPSGGDPNGGGGGAGGAGGKGGDGGAQAGDGGAGGAGG 480
Query 481 KGGNGGNGATGATGLNGLGAGADGTDGGKGGNGGAGGGGGAGGQGGKALAATHQDGSMGA 540
KGGNGGNGATGATGLNGLGAGADGTDGGKGGNGGAGGGGGAGGQGGKALAATHQDGSMGA
Sbjct 481 KGGNGGNGATGATGLNGLGAGADGTDGGKGGNGGAGGGGGAGGQGGKALAATHQDGSMGA 540
Query 541 GGAGGNGGAGGMGGDGGNGAKGTFDNGGDGVGGNGGNGGSRGIGGAGGIGGAGSTAGADG 600
GGAGGNGGAGGMGGDGGNGAKGTFDNGGDGVGGNGGNGGSRGIGGAGGIGGAGSTAGADG
Sbjct 541 GGAGGNGGAGGMGGDGGNGAKGTFDNGGDGVGGNGGNGGSRGIGGAGGIGGAGSTAGADG 600
Query 601 ARGATPTSGGNGGTGGNGANATVAGGAGGAGGKGGNGGLVGNGGAGGKGGDGMAGVAGSS 660
ARGATPTSGGNGGTGGNGANATVAGGAGGAGGKGGNGGLVGNGGAGGKGGDGMAGVAGSS
Sbjct 601 ARGATPTSGGNGGTGGNGANATVAGGAGGAGGKGGNGGLVGNGGAGGKGGDGMAGVAGSS 660
Query 661 PTTAGESGTSGQNGGAGGAGGAGGRGGDFGGDGGTGGAGGNGANGANATTPGAKGGDGGH 720
PTTAGESGTSGQNGGAGGAGGAGGRGGDFGGDGGTGGAGGNGANGANATTPGAKGGDGGH
Sbjct 661 PTTAGESGTSGQNGGAGGAGGAGGRGGDFGGDGGTGGAGGNGANGANATTPGAKGGDGGH 720
Query 721 GGPGAQGGNGGQGGPGGLAGNLFGQNGIQGVGGSGGKGGAGGLAGDGGNGANGNFAFGDG 780
GGPGAQGGNGGQGGPGGLAGNLFGQNGIQGVGGSGGKGGAGGLAGDGGNGANGNFAFGDG
Sbjct 721 GGPGAQGGNGGQGGPGGLAGNLFGQNGIQGVGGSGGKGGAGGLAGDGGNGANGNFAFGDG 780
Query 781 NGGHGGNGGNPGAGGQGGSGGAGSTPGAKGAHGFTPTSGGDGGDGGNGGNSQVVGGNGGD 840
NGGHGGNGGNPGAGGQGGSGGAGSTPGAKGAHGFTPTSGGDGGDGGNGGNSQVVGGNGGD
Sbjct 781 NGGHGGNGGNPGAGGQGGSGGAGSTPGAKGAHGFTPTSGGDGGDGGNGGNSQVVGGNGGD 840
Query 841 GGNGGNGGSAGTGGNGGRGGDGAFGGMSANATNPGENGPNGNPGGNGGAGGAGGAGLNGG 900
GGNGGNGGSAGTGGNGGRGGDGAFGGMSANATNPGENGPNGNPGGNGGAGGAGGAGLNGG
Sbjct 841 GGNGGNGGSAGTGGNGGRGGDGAFGGMSANATNPGENGPNGNPGGNGGAGGAGGAGLNGG 900
Query 901 NGGAGGNGGLGGFGGNGAAGANGVAVGAPGQPGGAGGHGGAGGNGGAGGNGGQGVVSDGA 960
NGGAGGNGGLGGFGGNGAAGANGVAVGAPGQPGGAGGHGGAGGNGGAGGNGGQGVVSDGA
Sbjct 901 NGGAGGNGGLGGFGGNGAAGANGVAVGAPGQPGGAGGHGGAGGNGGAGGNGGQGVVSDGA 960
Query 961 GGAGGAGGDGGAPGDGANGGNGQGAGAFAGGGGGRGGDGGNAGNAGAGGPGGTGSTAGKA 1020
GGAGGAGGDGGAPGDGANGGNGQGAGAFAGGGGGRGGDGGNAGNAGAGGPGGTGSTAGKA
Sbjct 961 GGAGGAGGDGGAPGDGANGGNGQGAGAFAGGGGGRGGDGGNAGNAGAGGPGGTGSTAGKA 1020
Query 1021 GPAGSILHDGGNGGHGGHGAASGGNGGPGGHGGNGGNGGTGANGGNGGIGGTGGAGSTGA 1080
GPAGSILHDGGNGGHGGHGAASGGNGGPGGHGGNGGNGGTGANGGNGGIGGTGGAGSTGA
Sbjct 1021 GPAGSILHDGGNGGHGGHGAASGGNGGPGGHGGNGGNGGTGANGGNGGIGGTGGAGSTGA 1080
Query 1081 KGVLGTNEGDGGDGGRGGNGGRGGNGGQGLTGAGGNGGTGGTPGNGGNGGNGASGDLVTS 1140
KGVLGTNEGDGGDGGRGGNGGRGGNGGQGLTGAGGNGGTGGTPGNGGNGGNGASGDLVTS
Sbjct 1081 KGVLGTNEGDGGDGGRGGNGGRGGNGGQGLTGAGGNGGTGGTPGNGGNGGNGASGDLVTS 1140
Query 1141 PGDGGGGGRGGDAGRGGDAGLGGSSGPGGTPGDWGTGGTGGTGGTGGQGANGGLTGGRGG 1200
PGDGGGGGRGGDAGRGGDAGLGGSSGPGGTPGDWGTGGTGGTGGTGGQGANGGLTGGRGG
Sbjct 1141 PGDGGGGGRGGDAGRGGDAGLGGSSGPGGTPGDWGTGGTGGTGGTGGQGANGGLTGGRGG 1200
Query 1201 TGGNGGNGNTGGTGGAGGTGGTGHNGSQPGMGGNGGAGGFGGNGFAGVGGRGGMGGSGGT 1260
TGGNGGNGNTGGTGGAGGTGGTGHNGSQPGMGGNGGAGGFGGNGFAGVGGRGGMGGSGGT
Sbjct 1201 TGGNGGNGNTGGTGGAGGTGGTGHNGSQPGMGGNGGAGGFGGNGFAGVGGRGGMGGSGGT 1260
Query 1261 GGTGDAGPFGTGTGGTGGHGGQGGGGGFSILLGLGGLGGLGSPGSIATGTAGGAGGGGGF 1320
GGTGDAGPFGTGTGGTGGHGGQGGGGGFSILLGLGGLGGLGSPGSIATGTAGGAGGGGGF
Sbjct 1261 GGTGDAGPFGTGTGGTGGHGGQGGGGGFSILLGLGGLGGLGSPGSIATGTAGGAGGGGGF 1320
Query 1321 GGLGGGEFV 1329
GGLGGGEFV
Sbjct 1321 GGLGGGEFV 1329
>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330
Score = 2099 bits (5439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1322/1329 (99%), Positives = 1324/1329 (99%), Gaps = 0/1329 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 180
LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 181
Query 181 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 240
AGGAGGSGGWL+GNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT
Sbjct 182 AGGAGGSGGWLVGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 241
Query 241 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 300
GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA
Sbjct 242 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 301
Query 301 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 360
AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA
Sbjct 302 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 361
Query 361 GDNGGDPGAGGAGGTGGAGSTIGAHGAAGASPTSGGNGGAGGNGAHFSSGGKAGGNGGAG 420
GDNGGDPGAGGAGGTGGAGSTIGAHGAAGASPTSGGNGGAGGNGAHFSSGGKAGGNGGAG
Sbjct 362 GDNGGDPGAGGAGGTGGAGSTIGAHGAAGASPTSGGNGGAGGNGAHFSSGGKAGGNGGAG 421
Query 421 GAGGLVGNGGAGGAGGNGAPGAPPSGGDPNGGGGGAGGAGGKGGDGGAQAGDGGAGGAGG 480
GAGGLVGNGGAGGAGGNGAPGAPPSGGDPNGGGGGAGGAGGKGGDGGAQAGDGGAGGAGG
Sbjct 422 GAGGLVGNGGAGGAGGNGAPGAPPSGGDPNGGGGGAGGAGGKGGDGGAQAGDGGAGGAGG 481
Query 481 KGGNGGNGATGATGLNGLGAGADGTDGGKGGNGGAGGGGGAGGQGGKALAATHQDGSMGA 540
KGGNGGNGATGATGLNGLGAGADGTDGGKGGNGGAGGGGGAGGQGGKALAATHQDGSMGA
Sbjct 482 KGGNGGNGATGATGLNGLGAGADGTDGGKGGNGGAGGGGGAGGQGGKALAATHQDGSMGA 541
Query 541 GGAGGNGGAGGMGGDGGNGAKGTFDNGGDGVGGNGGNGGSRGIGGAGGIGGAGSTAGADG 600
GGAGGNGGAGGMGGDGGNGAKGTFDNGGDGVGGNGGNGG RGIGGAGGIGGAGSTAGADG
Sbjct 542 GGAGGNGGAGGMGGDGGNGAKGTFDNGGDGVGGNGGNGGGRGIGGAGGIGGAGSTAGADG 601
Query 601 ARGATPTSGGNGGTGGNGANATVAGGAGGAGGKGGNGGLVGNGGAGGKGGDGMAGVAGSS 660
ARGATPTSGGNGGTGGNGANATVAGGAGGAGGKGGNGGLVGNGGAGGKGGDG AGVAGSS
Sbjct 602 ARGATPTSGGNGGTGGNGANATVAGGAGGAGGKGGNGGLVGNGGAGGKGGDGGAGVAGSS 661
Query 661 PTTAGESGTSGQNGGAGGAGGAGGRGGDFGGDGGTGGAGGNGANGANATTPGAKGGDGGH 720
PTTAGESGTSGQNGGAGGAGGAGGRGGDFGGDGGTGGAGGNGANGANATTPGAKGGDGGH
Sbjct 662 PTTAGESGTSGQNGGAGGAGGAGGRGGDFGGDGGTGGAGGNGANGANATTPGAKGGDGGH 721
Query 721 GGPGAQGGNGGQGGPGGLAGNLFGQNGIQGVGGSGGKGGAGGLAGDGGNGANGNFAFGDG 780
GGPGAQGGNGGQGGPGGLAGNLFGQNGIQGVGGSGGKGGAGGLAGDGGNGANGNFAFGDG
Sbjct 722 GGPGAQGGNGGQGGPGGLAGNLFGQNGIQGVGGSGGKGGAGGLAGDGGNGANGNFAFGDG 781
Query 781 NGGHGGNGGNPGAGGQGGSGGAGSTPGAKGAHGFTPTSGGDGGDGGNGGNSQVVGGNGGD 840
NGGHGGNGGNPGAGGQGGSGGAGSTPGAKGAHGFTPTSGGDGGDGGNGGNSQVVGGNGGD
Sbjct 782 NGGHGGNGGNPGAGGQGGSGGAGSTPGAKGAHGFTPTSGGDGGDGGNGGNSQVVGGNGGD 841
Query 841 GGNGGNGGSAGTGGNGGRGGDGAFGGMSANATNPGENGPNGNPGGNGGAGGAGGAGLNGG 900
GGNGGNGGSAGTGGNGGRGGDGAFGGMSANATNPGENGPNGNPGGNGGAGGAGGAGLNGG
Sbjct 842 GGNGGNGGSAGTGGNGGRGGDGAFGGMSANATNPGENGPNGNPGGNGGAGGAGGAGLNGG 901
Query 901 NGGAGGNGGLGGFGGNGAAGANGVAVGAPGQPGGAGGHGGAGGNGGAGGNGGQGVVSDGA 960
NGGAGGNGGLGGFGGNGAAGANGVAVGAPGQPGGAGGHGGAGGNGGAGGNGGQGVVSDGA
Sbjct 902 NGGAGGNGGLGGFGGNGAAGANGVAVGAPGQPGGAGGHGGAGGNGGAGGNGGQGVVSDGA 961
Query 961 GGAGGAGGDGGAPGDGANGGNGQGAGAFAGGGGGRGGDGGNAGNAGAGGPGGTGSTAGKA 1020
GGAGGAGGDGGAPGDGANGGNGQGAGAFAGGGGGRGGDGGNAGNAGAGGPGGTGSTAGKA
Sbjct 962 GGAGGAGGDGGAPGDGANGGNGQGAGAFAGGGGGRGGDGGNAGNAGAGGPGGTGSTAGKA 1021
Query 1021 GPAGSILHDGGNGGHGGHGAASGGNGGPGGHGGNGGNGGTGANGGNGGIGGTGGAGSTGA 1080
GPAGSILHDGGNGGHGGHGAASGGNGGPGGHGGNGGNGGTGANGGNGGIGGTGGAGSTGA
Sbjct 1022 GPAGSILHDGGNGGHGGHGAASGGNGGPGGHGGNGGNGGTGANGGNGGIGGTGGAGSTGA 1081
Query 1081 KGVLGTNEGDGGDGGRGGNGGRGGNGGQGLTGAGGNGGTGGTPGNGGNGGNGASGDLVTS 1140
KGVLGTNEGDGGDGGRGGNGGRGGNGGQGLTGAGGNGGTGGTPGNGGNGGNGASGDLVTS
Sbjct 1082 KGVLGTNEGDGGDGGRGGNGGRGGNGGQGLTGAGGNGGTGGTPGNGGNGGNGASGDLVTS 1141
Query 1141 PGDGGGGGRGGDAGRGGDAGLGGSSGPGGTPGDWGTGGTGGTGGTGGQGANGGLTGGRGG 1200
PGDGGGGGRGGDAGRGGDAGLGGSSGPGGTPGDWGTGGTGGTGGTGGQGANGGLTGGRGG
Sbjct 1142 PGDGGGGGRGGDAGRGGDAGLGGSSGPGGTPGDWGTGGTGGTGGTGGQGANGGLTGGRGG 1201
Query 1201 TGGNGGNGNTGGTGGAGGTGGTGHNGSQPGMGGNGGAGGFGGNGFAGVGGRGGMGGSGGT 1260
TGGNGGNGNTGGTGGAGGTGGTGHNGSQPGMGGNGGAGGFGGNGFAGVGGRGGMGGSGGT
Sbjct 1202 TGGNGGNGNTGGTGGAGGTGGTGHNGSQPGMGGNGGAGGFGGNGFAGVGGRGGMGGSGGT 1261
Query 1261 GGTGDAGPFGTGTGGTGGHGGQGGGGGFSILLGLGGLGGLGSPGSIATGTAGGAGGGGGF 1320
GGTGDAGPFGTGTGGTGGHGGQGGGGGFSILLGLGGLGGLGSPGSIATGTAGGAGGGGGF
Sbjct 1262 GGTGDAGPFGTGTGGTGGHGGQGGGGGFSILLGLGGLGGLGSPGSIATGTAGGAGGGGGF 1321
Query 1321 GGLGGGEFV 1329
GGLGGGEFV
Sbjct 1322 GGLGGGEFV 1330
>gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=1330
Score = 2077 bits (5381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1314/1329 (99%), Positives = 1318/1329 (99%), Gaps = 0/1329 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGAD+VSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 180
LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGA GLFGTGGAGGAGGAGA
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAGGLFGTGGAGGAGGAGA 181
Query 181 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 240
AGGAGG GGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT
Sbjct 182 AGGAGGGGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 241
Query 241 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 300
GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA
Sbjct 242 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 301
Query 301 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 360
AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA
Sbjct 302 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 361
Query 361 GDNGGDPGAGGAGGTGGAGSTIGAHGAAGASPTSGGNGGAGGNGAHFSSGGKAGGNGGAG 420
GD GGDPGAGGAGGTGGAGSTIGAHGAAGASPTSGGNGGAGGNGAHFSSGGKAGGNGGAG
Sbjct 362 GDTGGDPGAGGAGGTGGAGSTIGAHGAAGASPTSGGNGGAGGNGAHFSSGGKAGGNGGAG 421
Query 421 GAGGLVGNGGAGGAGGNGAPGAPPSGGDPNGGGGGAGGAGGKGGDGGAQAGDGGAGGAGG 480
GAGGLVGNGGAGGAGGNGAPGAPPSGGDPNGGGGGAGGAGGKGGDGGAQAGDGGAGGAGG
Sbjct 422 GAGGLVGNGGAGGAGGNGAPGAPPSGGDPNGGGGGAGGAGGKGGDGGAQAGDGGAGGAGG 481
Query 481 KGGNGGNGATGATGLNGLGAGADGTDGGKGGNGGAGGGGGAGGQGGKALAATHQDGSMGA 540
KGGNGGNGATGATGLNGLGAGADGTDGGKGGNGGAGGGGGAGGQGGKALAATHQDGSMGA
Sbjct 482 KGGNGGNGATGATGLNGLGAGADGTDGGKGGNGGAGGGGGAGGQGGKALAATHQDGSMGA 541
Query 541 GGAGGNGGAGGMGGDGGNGAKGTFDNGGDGVGGNGGNGGSRGIGGAGGIGGAGSTAGADG 600
GGAGGNGGAGGMGGDGGNGAKGTFDNGGDGVGGNGGNGGSRGIGGAGGIGGAGSTAGADG
Sbjct 542 GGAGGNGGAGGMGGDGGNGAKGTFDNGGDGVGGNGGNGGSRGIGGAGGIGGAGSTAGADG 601
Query 601 ARGATPTSGGNGGTGGNGANATVAGGAGGAGGKGGNGGLVGNGGAGGKGGDGMAGVAGSS 660
ARGATPTSGGNGGTGGNGA+ATVAGGAGGAGGKGGNGGLVGNGGAGGKGGDGMAGVAGSS
Sbjct 602 ARGATPTSGGNGGTGGNGAHATVAGGAGGAGGKGGNGGLVGNGGAGGKGGDGMAGVAGSS 661
Query 661 PTTAGESGTSGQNGGAGGAGGAGGRGGDFGGDGGTGGAGGNGANGANATTPGAKGGDGGH 720
PTTAGESGTSGQNGGAGGAGGAGGRGGDFGGDGGTGGAGGNGANGANATTPGAKGGDGGH
Sbjct 662 PTTAGESGTSGQNGGAGGAGGAGGRGGDFGGDGGTGGAGGNGANGANATTPGAKGGDGGH 721
Query 721 GGPGAQGGNGGQGGPGGLAGNLFGQNGIQGVGGSGGKGGAGGLAGDGGNGANGNFAFGDG 780
GGPGAQGGNGG+GGPGGLAGNLFGQNGIQGVGGSGGKGGAGGLAGDGGNGANGNFAFGDG
Sbjct 722 GGPGAQGGNGGKGGPGGLAGNLFGQNGIQGVGGSGGKGGAGGLAGDGGNGANGNFAFGDG 781
Query 781 NGGHGGNGGNPGAGGQGGSGGAGSTPGAKGAHGFTPTSGGDGGDGGNGGNSQVVGGNGGD 840
NGGHGGNGGNPGAGGQGGSGGAGSTPGAKGAHGFTPTSGGDGGDGGNGGNSQVVGGNGGD
Sbjct 782 NGGHGGNGGNPGAGGQGGSGGAGSTPGAKGAHGFTPTSGGDGGDGGNGGNSQVVGGNGGD 841
Query 841 GGNGGNGGSAGTGGNGGRGGDGAFGGMSANATNPGENGPNGNPGGNGGAGGAGGAGLNGG 900
GGNGGNGGSAGTGGNGGRGGDGAFGGMSANATNPGENGPNGNPGGNGGAGGAGGAGLNGG
Sbjct 842 GGNGGNGGSAGTGGNGGRGGDGAFGGMSANATNPGENGPNGNPGGNGGAGGAGGAGLNGG 901
Query 901 NGGAGGNGGLGGFGGNGAAGANGVAVGAPGQPGGAGGHGGAGGNGGAGGNGGQGVVSDGA 960
NGGAGGNGGLGGFGGNGAAGANGVAVGAPGQPGGAGGHGGAGGNGGAGGNGGQGVVSDGA
Sbjct 902 NGGAGGNGGLGGFGGNGAAGANGVAVGAPGQPGGAGGHGGAGGNGGAGGNGGQGVVSDGA 961
Query 961 GGAGGAGGDGGAPGDGANGGNGQGAGAFAGGGGGRGGDGGNAGNAGAGGPGGTGSTAGKA 1020
GGAGGAGGDGGAPG GANGGNGQGAGA AGGGGGRGGDGGNAGNAGAGGPGGTGSTAGKA
Sbjct 962 GGAGGAGGDGGAPGVGANGGNGQGAGAIAGGGGGRGGDGGNAGNAGAGGPGGTGSTAGKA 1021
Query 1021 GPAGSILHDGGNGGHGGHGAASGGNGGPGGHGGNGGNGGTGANGGNGGIGGTGGAGSTGA 1080
GPAGSILHDGGNGGHGG GAASGGNGGPGGHGGNGGNGGTGANGGNGGIGGTGGAGSTGA
Sbjct 1022 GPAGSILHDGGNGGHGGLGAASGGNGGPGGHGGNGGNGGTGANGGNGGIGGTGGAGSTGA 1081
Query 1081 KGVLGTNEGDGGDGGRGGNGGRGGNGGQGLTGAGGNGGTGGTPGNGGNGGNGASGDLVTS 1140
KGVLGTNEGDGGDGGRGGNGGRGGNGGQGLTGA GNGGTGGTPGNGGNGGNGASGDLVTS
Sbjct 1082 KGVLGTNEGDGGDGGRGGNGGRGGNGGQGLTGARGNGGTGGTPGNGGNGGNGASGDLVTS 1141
Query 1141 PGDGGGGGRGGDAGRGGDAGLGGSSGPGGTPGDWGTGGTGGTGGTGGQGANGGLTGGRGG 1200
PGDGGGGGRGGDAGRGGDAGLGGSSGPGGTPGDWG GGTGGTGGTGGQGANGGLTGGRGG
Sbjct 1142 PGDGGGGGRGGDAGRGGDAGLGGSSGPGGTPGDWGAGGTGGTGGTGGQGANGGLTGGRGG 1201
Query 1201 TGGNGGNGNTGGTGGAGGTGGTGHNGSQPGMGGNGGAGGFGGNGFAGVGGRGGMGGSGGT 1260
TGGNGGNGNTGGTGGAGGTGGTGHNGSQPGMGGNGGAGGFGGNGFAGVGGRGGMGGSGGT
Sbjct 1202 TGGNGGNGNTGGTGGAGGTGGTGHNGSQPGMGGNGGAGGFGGNGFAGVGGRGGMGGSGGT 1261
Query 1261 GGTGDAGPFGTGTGGTGGHGGQGGGGGFSILLGLGGLGGLGSPGSIATGTAGGAGGGGGF 1320
GGTGDAGPFGTGTGGTGGHGGQGGGGGFSILLGLGGLGGLGSPGSIATGTAGGAGGGGGF
Sbjct 1262 GGTGDAGPFGTGTGGTGGHGGQGGGGGFSILLGLGGLGGLGSPGSIATGTAGGAGGGGGF 1321
Query 1321 GGLGGGEFV 1329
GGLGGGEFV
Sbjct 1322 GGLGGGEFV 1330
>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVAPETVAAAALDVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224772970|dbj|BAH25776.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601401|emb|CCC64074.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=740
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVAPETVAAAALDVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121493029|emb|CAL71500.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=740
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVAPETVAAAALDVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31618236|emb|CAD96154.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=795
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVAPETVAAAALDVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|344219282|gb|AEM99912.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=625
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|289442899|ref|ZP_06432643.1| PE domain-containing protein [Mycobacterium tuberculosis T46]
gi|289415818|gb|EFD13058.1| PE domain-containing protein [Mycobacterium tuberculosis T46]
Length=527
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis
CCDC5079]
Length=742
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13881115|gb|AAK45763.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=738
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148721198|gb|ABR05823.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=737
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148661244|ref|YP_001282767.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441232|pir||G70917 hypothetical glycine-rich protein Rv1452c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490272|emb|CAE55391.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148505396|gb|ABQ73205.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=741
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis
CCDC5180]
Length=742
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=805
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|253799499|ref|YP_003032500.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289554759|ref|ZP_06443969.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|253321002|gb|ACT25605.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289439391|gb|EFD21884.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|328459247|gb|AEB04670.1| hypothetical protein TBSG_02541 [Mycobacterium tuberculosis KZN
4207]
Length=738
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/143 (95%), Positives = 136/143 (96%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PE VAAAA DVARIGS GAAN+ AAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRF QTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|297634014|ref|ZP_06951794.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=406
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004654|emb|CCC43798.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1408
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/143 (95%), Positives = 137/143 (96%), Gaps = 0/143 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PE+VAAAA DVARIGS GAANAAAAGSTTSVLAAGADEVSAAIA LFGS+AR
Sbjct 1 MSLVIVTPESVAAAASDVARIGSGFGAANAAAAGSTTSVLAAGADEVSAAIALLFGSYAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRF QTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/144 (69%), Positives = 116/144 (81%), Gaps = 0/144 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V VAPE VA AA D+ R+GS+I AAN AAAGSTT++LAAGADEVSA IA LFG+HA
Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQ++ FH++F QTL+ VG+Y +AE N PL +E ++LN +NAPTQAL GRP
Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILWG 144
LIG+GA GA GTGQAG AGGILWG
Sbjct 121 LIGNGADGAAGTGQAGAAGGILWG 144
>gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
Length=2118
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/133 (66%), Positives = 107/133 (81%), Gaps = 3/133 (2%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLV V+PE VA AA D+ARIGSS+GAANAAAAG TT+VL+A ADEVS AIATLFG+HA
Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATL---EHNVLNALNAPTQALL 117
EYQ++S ++AAFH++F QTL++ G YVS EATNA+ ++ L E N LNA+NAPTQ+ L
Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120
Query 118 GRPLIGDGAAGAP 130
GRPLIG+G P
Sbjct 121 GRPLIGNGVDATP 133
>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN
4207]
gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/130 (58%), Positives = 91/130 (70%), Gaps = 7/130 (5%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE + AA D+A+IGS+ A AA + VL A ADEVS A+A LFG+HA+
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +S QVA FHDRF QTLSA SYV+AEA N +E ++L A+NAPTQAL GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 121 LIGDGAAGAP 130
LIG+GA G+P
Sbjct 114 LIGNGADGSP 123
>gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=998
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/130 (58%), Positives = 91/130 (70%), Gaps = 7/130 (5%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE + AA D+A+IGS+ A AA + VL A ADEVS A+A LFG+HA+
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +S QVA FHDRF QTLSA SYV+AEA N +E ++L A+NAPTQAL GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 121 LIGDGAAGAP 130
LIG+GA G+P
Sbjct 114 LIGNGADGSP 123
>gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1657
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 91/126 (73%), Gaps = 4/126 (3%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE +A AA D+ARIGS + AA+A AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
Query 121 LIGDGA 126
LIGDGA
Sbjct 117 LIGDGA 122
>gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=1323
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 91/126 (73%), Gaps = 4/126 (3%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE +A AA D+ARIGS + AA+A AA TT V+AAGADEVSA IA LF +HA+
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 121
Query 121 LIGDGA 126
LIGDGA
Sbjct 122 LIGDGA 127
>gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1665
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 91/126 (73%), Gaps = 4/126 (3%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE +A AA D+ARIGS + AA+A AA TT V+AAGADEVSA IA LF +HA+
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 121
Query 121 LIGDGA 126
LIGDGA
Sbjct 122 LIGDGA 127
>gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis
(strain H37RV)
gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1660
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 91/126 (73%), Gaps = 4/126 (3%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE +A AA D+ARIGS + AA+A AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
Query 121 LIGDGA 126
LIGDGA
Sbjct 117 LIGDGA 122
>gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1644
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 91/126 (73%), Gaps = 4/126 (3%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE +A AA D+ARIGS + AA+A AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
Query 121 LIGDGA 126
LIGDGA
Sbjct 117 LIGDGA 122
>gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1660
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 91/126 (73%), Gaps = 4/126 (3%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE +A AA D+ARIGS + AA+A AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAM----RAVLGAVNAPTQTLLGRP 116
Query 121 LIGDGA 126
LIGDGA
Sbjct 117 LIGDGA 122
>gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1397
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/126 (62%), Positives = 93/126 (74%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V V PE V AAA D++ I S+I AN+ AA +TT+VL A ADEVSAAIA LFG+HA+
Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
+YQAIS ++AAFHDRF Q+L+ GSY+ AEA NA E +L +NAPTQAL GRP
Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANA------EQGLLGLVNAPTQALFGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN
1435]
gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN
4207]
Length=1616
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 91/126 (73%), Gaps = 4/126 (3%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE +A AA D+ARIGS + AA+A AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
Query 121 LIGDGA 126
LIGDGA
Sbjct 117 LIGDGA 122
>gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1483
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 90/125 (72%), Gaps = 6/125 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V VAPE VAAA D+A IGSSI AANAAA TT V+ A ADEVSAAIA LFGSHAR
Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS Q AAFH+R QTL + +Y+ E NA + N+LNA+N PTQA LGRP
Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANA------QQNLLNAVNGPTQAWLGRP 114
Query 121 LIGDG 125
LIG+G
Sbjct 115 LIGNG 119
>gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1425
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/163 (61%), Positives = 117/163 (72%), Gaps = 6/163 (3%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS +V P+ + AAA D+A+IG++I + AAA STT++L A ADEVSAAIA+LFG+HA
Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
YQAI Q A FHD F Q LS A Y + E N +E N+L +NAPTQAL GRP
Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVAN------VEQNLLGLINAPTQALFGRP 114
Query 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGA 163
LIG+GA GA GTGQ G AGG+LWGNGGAGGSGAPGQ GG GGA
Sbjct 115 LIGNGADGAAGTGQTGQAGGLLWGNGGAGGSGAPGQSGGTGGA 157
>gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=1657
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/123 (61%), Positives = 89/123 (73%), Gaps = 4/123 (3%)
Query 4 VIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAREYQ 63
+I PE +A AA D+ARIGS + AA+A AA TT V+AAGADEVSA IA LF +HA+EYQ
Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60
Query 64 AISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRPLIG 123
A+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRPLIG
Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRPLIG 116
Query 124 DGA 126
DGA
Sbjct 117 DGA 119
>gi|183980462|ref|YP_001848753.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183173788|gb|ACC38898.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1134
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/126 (54%), Positives = 88/126 (70%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
M+ V+V+PE +A+AA D+ RIG+ + NAAAA T +V +A ADEVS AIA LF HA+
Sbjct 1 MTFVLVSPEAMASAAADIERIGALLTQGNAAAASPTINVASAAADEVSTAIAALFSQHAK 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
YQ ++ ++AA DRF +T+ A+ SY SAEATNAA +L +N PTQALLGRP
Sbjct 61 TYQLLAAELAAIPDRFTKTVLASANSYASAEATNAA------DALLGVINTPTQALLGRP 114
Query 121 LIGDGA 126
LIG+GA
Sbjct 115 LIGNGA 120
>gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31620284|emb|CAD95727.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1938
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AAN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|148824718|ref|YP_001289472.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148723245|gb|ABR07870.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=1888
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AAN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114 [Mycobacterium tuberculosis KZN
1435]
gi|253322056|gb|ACT26659.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328460284|gb|AEB05707.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=1767
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AAN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332869|emb|CCC28593.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1817
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AAN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1695
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AAN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224775041|dbj|BAH27847.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=1695
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AAN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121495078|emb|CAL73564.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=1810
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AAN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1787
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AAN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|339299931|gb|AEJ52041.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=1542
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 6/126 (4%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AAN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13883276|gb|AAK47791.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1507
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/167 (71%), Positives = 135/167 (81%), Gaps = 1/167 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSL +VAPE VAAAA D+ IG +I AANAAAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLF 167
LIGDG GAPGTGQ GGAGG+LWGNGG GGSGA GQVGG GGAAGLF
Sbjct 122 LIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
>gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121492143|emb|CAL70608.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=1303
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/130 (59%), Positives = 92/130 (71%), Gaps = 7/130 (5%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE + AA D+A+IGS+ A AA + VL A ADEVS A+A LFG+HA+
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 121 LIGDGAAGAP 130
LIG+GA G+P
Sbjct 114 LIGNGADGSP 123
>gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504499|gb|ABQ72308.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1306
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/130 (59%), Positives = 92/130 (71%), Gaps = 7/130 (5%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE + AA D+A+IGS+ A AA + VL A ADEVS A+A LFG+HA+
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 121 LIGDGAAGAP 130
LIG+GA G+P
Sbjct 114 LIGNGADGSP 123
>gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617347|emb|CAD93455.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1306
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/130 (59%), Positives = 92/130 (71%), Gaps = 7/130 (5%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE + AA D+A+IGS+ A AA + VL A ADEVS A+A LFG+HA+
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 121 LIGDGAAGAP 130
LIG+GA G+P
Sbjct 114 LIGNGADGSP 123
>gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148821780|ref|YP_001286533.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|224988968|ref|YP_002643655.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
7 more sequence titles
Length=1306
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/130 (59%), Positives = 92/130 (71%), Gaps = 7/130 (5%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI PE + AA D+A+IGS+ A AA + VL A ADEVS A+A LFG+HA+
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +S QVA FHDRF QTLSAA SYV+AEA N +E ++L A+NAPTQAL GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 121 LIGDGAAGAP 130
LIG+GA G+P
Sbjct 114 LIGNGADGSP 123
>gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178656|gb|ACC43766.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=2001
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/130 (58%), Positives = 94/130 (73%), Gaps = 0/130 (0%)
Query 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI P+ +AAAA D+ IGS++GAAN+AA TT +LAA DEVS AIA+LF + A+
Sbjct 1 MSYVIATPDMLAAAASDLTNIGSTLGAANSAALARTTGLLAAAEDEVSTAIASLFSASAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +ST+ A H F +L+ A +Y +AEA NA+PL TLE NVL A+NAP+QAL RP
Sbjct 61 EYQMVSTRAAHLHAEFVHSLTRAGAAYAAAEAVNASPLQTLEQNVLAAINAPSQALTARP 120
Query 121 LIGDGAAGAP 130
L GDGA GAP
Sbjct 121 LFGDGADGAP 130
Lambda K H
0.305 0.142 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3419153282204
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40