BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1452c
Length=741
Score E
Sequences producing significant alignments: (Bits) Value
gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [... 1214 0.0
gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacteri... 1214 0.0
gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [... 1202 0.0
gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 257 4e-66
gi|344219282|gb|AEM99912.1| PE-PGRS family protein [Mycobacteriu... 257 6e-66
gi|289442899|ref|ZP_06432643.1| PE domain-containing protein [My... 257 6e-66
gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacteri... 256 1e-65
gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobac... 256 1e-65
gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 255 2e-65
gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 254 4e-65
gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 251 3e-64
gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 251 3e-64
gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 251 4e-64
gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacter... 250 6e-64
gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobac... 250 7e-64
gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 243 1e-61
gi|297634014|ref|ZP_06951794.1| PE-PGRS family protein [Mycobact... 241 3e-61
gi|253799499|ref|YP_003032500.1| PE-PGRS family protein [Mycobac... 241 3e-61
gi|297634017|ref|ZP_06951797.1| PE-PGRS family protein [Mycobact... 241 4e-61
gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 240 7e-61
gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 237 6e-60
gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 237 7e-60
gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 237 8e-60
gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 236 8e-60
gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobac... 203 8e-50
gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 167 6e-39
gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 162 3e-37
gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 150 1e-33
gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 149 1e-33
gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 143 1e-31
gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 139 1e-30
gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 139 2e-30
gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 139 2e-30
gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 139 2e-30
gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 139 2e-30
gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 139 2e-30
gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 139 2e-30
gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 138 3e-30
gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 135 3e-29
gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 134 9e-29
gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobac... 133 9e-29
gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 133 1e-28
gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacteriu... 133 1e-28
gi|148824718|ref|YP_001289472.1| PE-PGRS family protein [Mycobac... 131 5e-28
gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacteri... 130 6e-28
gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114... 130 7e-28
gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacteri... 130 7e-28
gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobac... 130 7e-28
gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacteriu... 130 7e-28
gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobac... 130 7e-28
>gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis
CCDC5180]
Length=742
Score = 1214 bits (3142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 741/741 (100%), Positives = 741/741 (100%), Gaps = 0/741 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 180
LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 181
Query 181 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 240
AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT
Sbjct 182 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 241
Query 241 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 300
GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA
Sbjct 242 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 301
Query 301 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 360
AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA
Sbjct 302 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 361
Query 361 GDNGGDGGNGGMGGAGGAGGPGGAGGLISLLGGQGAGGAGGTGGAGGVGGDRGAGGPGNQ 420
GDNGGDGGNGGMGGAGGAGGPGGAGGLISLLGGQGAGGAGGTGGAGGVGGDRGAGGPGNQ
Sbjct 362 GDNGGDGGNGGMGGAGGAGGPGGAGGLISLLGGQGAGGAGGTGGAGGVGGDRGAGGPGNQ 421
Query 421 AFNAGAGGAGGHGGDPGAGGAGGTGGAGSITGAQGAIGATPTSGGNGGAGGNGANATTAG 480
AFNAGAGGAGGHGGDPGAGGAGGTGGAGSITGAQGAIGATPTSGGNGGAGGNGANATTAG
Sbjct 422 AFNAGAGGAGGHGGDPGAGGAGGTGGAGSITGAQGAIGATPTSGGNGGAGGNGANATTAG 481
Query 481 TNGANGGPGGHGGLVGNGGAGGNGANGAAGTNASDSGAVGGKGNSGGNGGQGGAGGDGGT 540
TNGANGGPGGHGGLVGNGGAGGNGANGAAGTNASDSGAVGGKGNSGGNGGQGGAGGDGGT
Sbjct 482 TNGANGGPGGHGGLVGNGGAGGNGANGAAGTNASDSGAVGGKGNSGGNGGQGGAGGDGGT 541
Query 541 LAGNGGAGGTGGRGADGGLGGSGAEGANATTAGERGQDGGKGGNGGVGGTGGNAVAPGAN 600
LAGNGGAGGTGGRGADGGLGGSGAEGANATTAGERGQDGGKGGNGGVGGTGGNAVAPGAN
Sbjct 542 LAGNGGAGGTGGRGADGGLGGSGAEGANATTAGERGQDGGKGGNGGVGGTGGNAVAPGAN 601
Query 601 GGHGGNGGNPGFSGAGGLGGLSGDGVTRAAQGATPDFADTGGKGGNGGNGANAVAPGGTG 660
GGHGGNGGNPGFSGAGGLGGLSGDGVTRAAQGATPDFADTGGKGGNGGNGANAVAPGGTG
Sbjct 602 GGHGGNGGNPGFSGAGGLGGLSGDGVTRAAQGATPDFADTGGKGGNGGNGANAVAPGGTG 661
Query 661 ASGGAGGNAGAGGKGGENIIGDGGGGNGGAGGKGGAGTLLGLTVFGDNGGAGVLGDSTDP 720
ASGGAGGNAGAGGKGGENIIGDGGGGNGGAGGKGGAGTLLGLTVFGDNGGAGVLGDSTDP
Sbjct 662 ASGGAGGNAGAGGKGGENIIGDGGGGNGGAGGKGGAGTLLGLTVFGDNGGAGVLGDSTDP 721
Query 721 DGSGGAGGAGGAGGAGGDPTI 741
DGSGGAGGAGGAGGAGGDPTI
Sbjct 722 DGSGGAGGAGGAGGAGGDPTI 742
>gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148661244|ref|YP_001282767.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441232|pir||G70917 hypothetical glycine-rich protein Rv1452c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490272|emb|CAE55391.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148505396|gb|ABQ73205.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=741
Score = 1214 bits (3142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 741/741 (100%), Positives = 741/741 (100%), Gaps = 0/741 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 180
LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 180
Query 181 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 240
AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT
Sbjct 181 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 240
Query 241 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 300
GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA
Sbjct 241 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 300
Query 301 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 360
AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA
Sbjct 301 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 360
Query 361 GDNGGDGGNGGMGGAGGAGGPGGAGGLISLLGGQGAGGAGGTGGAGGVGGDRGAGGPGNQ 420
GDNGGDGGNGGMGGAGGAGGPGGAGGLISLLGGQGAGGAGGTGGAGGVGGDRGAGGPGNQ
Sbjct 361 GDNGGDGGNGGMGGAGGAGGPGGAGGLISLLGGQGAGGAGGTGGAGGVGGDRGAGGPGNQ 420
Query 421 AFNAGAGGAGGHGGDPGAGGAGGTGGAGSITGAQGAIGATPTSGGNGGAGGNGANATTAG 480
AFNAGAGGAGGHGGDPGAGGAGGTGGAGSITGAQGAIGATPTSGGNGGAGGNGANATTAG
Sbjct 421 AFNAGAGGAGGHGGDPGAGGAGGTGGAGSITGAQGAIGATPTSGGNGGAGGNGANATTAG 480
Query 481 TNGANGGPGGHGGLVGNGGAGGNGANGAAGTNASDSGAVGGKGNSGGNGGQGGAGGDGGT 540
TNGANGGPGGHGGLVGNGGAGGNGANGAAGTNASDSGAVGGKGNSGGNGGQGGAGGDGGT
Sbjct 481 TNGANGGPGGHGGLVGNGGAGGNGANGAAGTNASDSGAVGGKGNSGGNGGQGGAGGDGGT 540
Query 541 LAGNGGAGGTGGRGADGGLGGSGAEGANATTAGERGQDGGKGGNGGVGGTGGNAVAPGAN 600
LAGNGGAGGTGGRGADGGLGGSGAEGANATTAGERGQDGGKGGNGGVGGTGGNAVAPGAN
Sbjct 541 LAGNGGAGGTGGRGADGGLGGSGAEGANATTAGERGQDGGKGGNGGVGGTGGNAVAPGAN 600
Query 601 GGHGGNGGNPGFSGAGGLGGLSGDGVTRAAQGATPDFADTGGKGGNGGNGANAVAPGGTG 660
GGHGGNGGNPGFSGAGGLGGLSGDGVTRAAQGATPDFADTGGKGGNGGNGANAVAPGGTG
Sbjct 601 GGHGGNGGNPGFSGAGGLGGLSGDGVTRAAQGATPDFADTGGKGGNGGNGANAVAPGGTG 660
Query 661 ASGGAGGNAGAGGKGGENIIGDGGGGNGGAGGKGGAGTLLGLTVFGDNGGAGVLGDSTDP 720
ASGGAGGNAGAGGKGGENIIGDGGGGNGGAGGKGGAGTLLGLTVFGDNGGAGVLGDSTDP
Sbjct 661 ASGGAGGNAGAGGKGGENIIGDGGGGNGGAGGKGGAGTLLGLTVFGDNGGAGVLGDSTDP 720
Query 721 DGSGGAGGAGGAGGAGGDPTI 741
DGSGGAGGAGGAGGAGGDPTI
Sbjct 721 DGSGGAGGAGGAGGAGGDPTI 741
>gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis
CCDC5079]
Length=742
Score = 1202 bits (3109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/741 (99%), Positives = 737/741 (99%), Gaps = 0/741 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 180
LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILWGNGGAGGSGAPGQVGGAGGAAGLFGTGGAGGAGGAGA 181
Query 181 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 240
AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT
Sbjct 182 AGGAGGSGGWLLGNGGVGGAGGQSLLGGATGGAGGNAGLFGVGGTGGPGGPGGPGGVGGT 241
Query 241 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 300
GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA
Sbjct 242 GGAGGLGGTLYGAGGHGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGVAGA 301
Query 301 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 360
AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA
Sbjct 302 AGEDLSPHGTSGGVGGDAGDGGTGGRGGWLAGAGGAGGAGGVGGTGGAGGAGFSRALIVA 361
Query 361 GDNGGDGGNGGMGGAGGAGGPGGAGGLISLLGGQGAGGAGGTGGAGGVGGDRGAGGPGNQ 420
GDNGGDGGNGGMGGAGGAGGPGGAGGLISLLGGQGAGGAGGTGGAGGVGGDRGAG GNQ
Sbjct 362 GDNGGDGGNGGMGGAGGAGGPGGAGGLISLLGGQGAGGAGGTGGAGGVGGDRGAGANGNQ 421
Query 421 AFNAGAGGAGGHGGDPGAGGAGGTGGAGSITGAQGAIGATPTSGGNGGAGGNGANATTAG 480
AFNAGAGGAGG GGDPGAGGAGGTGGAGSITGAQGAIGATPTSGGNGGAGGNGANATTAG
Sbjct 422 AFNAGAGGAGGQGGDPGAGGAGGTGGAGSITGAQGAIGATPTSGGNGGAGGNGANATTAG 481
Query 481 TNGANGGPGGHGGLVGNGGAGGNGANGAAGTNASDSGAVGGKGNSGGNGGQGGAGGDGGT 540
TNGA+GGPGGHGGLVGNGGAGGNG NGAAGTNASDSGAVGGKGNSGGNGGQGGAGGDGGT
Sbjct 482 TNGAHGGPGGHGGLVGNGGAGGNGGNGAAGTNASDSGAVGGKGNSGGNGGQGGAGGDGGT 541
Query 541 LAGNGGAGGTGGRGADGGLGGSGAEGANATTAGERGQDGGKGGNGGVGGTGGNAVAPGAN 600
LAGNGGAGGTGGRGADGGLGGSGAEGANATTAGERGQDGGKGGNGGVGGTGGNAVAPGAN
Sbjct 542 LAGNGGAGGTGGRGADGGLGGSGAEGANATTAGERGQDGGKGGNGGVGGTGGNAVAPGAN 601
Query 601 GGHGGNGGNPGFSGAGGLGGLSGDGVTRAAQGATPDFADTGGKGGNGGNGANAVAPGGTG 660
GGHGGNGGNPGFSGAGGLGGLSGDGVTRAAQGATPDFADTGGKGGNGGNGANAVAPGGTG
Sbjct 602 GGHGGNGGNPGFSGAGGLGGLSGDGVTRAAQGATPDFADTGGKGGNGGNGANAVAPGGTG 661
Query 661 ASGGAGGNAGAGGKGGENIIGDGGGGNGGAGGKGGAGTLLGLTVFGDNGGAGVLGDSTDP 720
ASGGAGGNAGAGGKGGENIIGDGGGGNGGAGGKGGAGTLLGLTVFGDNGGAGVLGDSTDP
Sbjct 662 ASGGAGGNAGAGGKGGENIIGDGGGGNGGAGGKGGAGTLLGLTVFGDNGGAGVLGDSTDP 721
Query 721 DGSGGAGGAGGAGGAGGDPTI 741
DGSGGAGGAGGAGGAGGDPTI
Sbjct 722 DGSGGAGGAGGAGGAGGDPTI 742
>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|344219282|gb|AEM99912.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=625
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|289442899|ref|ZP_06432643.1| PE domain-containing protein [Mycobacterium tuberculosis T46]
gi|289415818|gb|EFD13058.1| PE domain-containing protein [Mycobacterium tuberculosis T46]
Length=527
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13881115|gb|AAK45763.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=738
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148721198|gb|ABR05823.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=737
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=805
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=1330
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/143 (99%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGAD+VSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1408
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1399
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121493029|emb|CAL71500.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=740
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224772970|dbj|BAH25776.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601401|emb|CCC64074.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=740
Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN
1435]
gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN
4207]
Length=1408
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|297634014|ref|ZP_06951794.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=406
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|253799499|ref|YP_003032500.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289554759|ref|ZP_06443969.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|253321002|gb|ACT25605.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289439391|gb|EFD21884.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|328459247|gb|AEB04670.1| hypothetical protein TBSG_02541 [Mycobacterium tuberculosis KZN
4207]
Length=738
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|297634017|ref|ZP_06951797.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=334
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 141/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPETVAAAASDVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 137/143 (96%), Positives = 137/143 (96%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPE VAAAASDVARIGS G ANS AAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRF QTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/40 (95%), Positives = 39/40 (98%), Gaps = 0/40 (0%)
Query 702 LTVFGDNGGAGVLGDSTDPDGSGGAGGAGGAGGAGGDPTI 741
+T FGDNGGAGVLGDSTDPDGSGGAGGAGGAGGAGGDPTI
Sbjct 967 VTAFGDNGGAGVLGDSTDPDGSGGAGGAGGAGGAGGDPTI 1006
>gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=1329
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1398
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1408
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 2 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 122 LIGDGAAGAPGTGQAGGAGGILW 144
>gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1407
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIV PETVAAAA DVARIGSSIG AN+AAAGSTTSVLAAGADEVSAAIATLFGSHAR
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004654|emb|CCC43798.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1408
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 135/143 (95%), Positives = 138/143 (97%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLVIVTPE+VAAAASDVARIGS G AN+AAAGSTTSVLAAGADEVSAAIA LFGS+AR
Sbjct 1 MSLVIVTPESVAAAASDVARIGSGFGAANAAAAGSTTSVLAAGADEVSAAIALLFGSYAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQVAAFHDRF QTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIGDGAAGAPGTGQAGGAGGILW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/143 (68%), Positives = 114/143 (80%), Gaps = 0/143 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V V PE VA AASD+ R+GS+I AN AAAGSTT++LAAGADEVSA IA LFG+HA
Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAISTQ++ FH++F QTL+ VG+Y +AE N PL +E ++LN +NAPTQAL GRP
Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRP 120
Query 121 LIGDGAAGAPGTGQAGGAGGILW 143
LIG+GA GA GTGQAG AGGILW
Sbjct 121 LIGNGADGAAGTGQAGAAGGILW 143
>gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
Length=2118
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/133 (65%), Positives = 107/133 (81%), Gaps = 3/133 (2%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MSLV V+PE VA AASD+ARIGSS+G AN+AAAG TT+VL+A ADEVS AIATLFG+HA
Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATL---EHNVLNALNAPTQALL 117
EYQ++S ++AAFH++F QTL++ G YVS EATNA+ ++ L E N LNA+NAPTQ+ L
Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120
Query 118 GRPLIGDGAAGAP 130
GRPLIG+G P
Sbjct 121 GRPLIGNGVDATP 133
>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN
4207]
gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/130 (59%), Positives = 94/130 (73%), Gaps = 7/130 (5%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TPE + AA+D+A+IGS+ A + AA + VL A ADEVS A+A LFG+HA+
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +S QVA FHDRF QTLSA SYV+AEA N +E ++L A+NAPTQAL GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 121 LIGDGAAGAP 130
LIG+GA G+P
Sbjct 114 LIGNGADGSP 123
>gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=998
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/130 (59%), Positives = 94/130 (73%), Gaps = 7/130 (5%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TPE + AA+D+A+IGS+ A + AA + VL A ADEVS A+A LFG+HA+
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +S QVA FHDRF QTLSA SYV+AEA N +E ++L A+NAPTQAL GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 121 LIGDGAAGAP 130
LIG+GA G+P
Sbjct 114 LIGNGADGSP 123
>gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1397
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 95/126 (76%), Gaps = 6/126 (4%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V VTPE V AAASD++ I S+I ANS AA +TT+VL A ADEVSAAIA LFG+HA+
Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
+YQAIS ++AAFHDRF Q+L+ GSY+ AEA NA E +L +NAPTQAL GRP
Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANA------EQGLLGLVNAPTQALFGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=846
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/130 (58%), Positives = 99/130 (77%), Gaps = 1/130 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAA-GADEVSAAIATLFGSHA 59
MS V +PE + AAA++V+ IGSS+ AN++AA TT++L+A GADEVSAA+ +FG+HA
Sbjct 1 MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA 60
Query 60 REYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGR 119
+ YQA+STQ A FHDRF L+A +Y SAEA+ AA L +L ++LN +NAPTQALLGR
Sbjct 61 QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR 120
Query 120 PLIGDGAAGA 129
LIG+GA GA
Sbjct 121 ALIGNGANGA 130
>gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=1323
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/128 (61%), Positives = 92/128 (72%), Gaps = 4/128 (3%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TPE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 121
Query 121 LIGDGAAG 128
LIGDGA G
Sbjct 122 LIGDGAHG 129
>gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1657
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/128 (61%), Positives = 92/128 (72%), Gaps = 4/128 (3%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TPE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
Query 121 LIGDGAAG 128
LIGDGA G
Sbjct 117 LIGDGAHG 124
>gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1665
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/128 (61%), Positives = 92/128 (72%), Gaps = 4/128 (3%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TPE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 121
Query 121 LIGDGAAG 128
LIGDGA G
Sbjct 122 LIGDGAHG 129
>gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis
(strain H37RV)
gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1660
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/128 (61%), Positives = 92/128 (72%), Gaps = 4/128 (3%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TPE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
Query 121 LIGDGAAG 128
LIGDGA G
Sbjct 117 LIGDGAHG 124
>gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1644
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/128 (61%), Positives = 92/128 (72%), Gaps = 4/128 (3%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TPE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
Query 121 LIGDGAAG 128
LIGDGA G
Sbjct 117 LIGDGAHG 124
>gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1660
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/128 (61%), Positives = 92/128 (72%), Gaps = 4/128 (3%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TPE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAM----RAVLGAVNAPTQTLLGRP 116
Query 121 LIGDGAAG 128
LIGDGA G
Sbjct 117 LIGDGAHG 124
>gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN
1435]
gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN
4207]
Length=1616
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/128 (61%), Positives = 92/128 (72%), Gaps = 4/128 (3%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TPE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
Query 121 LIGDGAAG 128
LIGDGA G
Sbjct 117 LIGDGAHG 124
>gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1483
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/125 (62%), Positives = 88/125 (71%), Gaps = 6/125 (4%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V V PE VAAA D+A IGSSI AN+AA TT V+ A ADEVSAAIA LFGSHAR
Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS Q AAFH+R QTL + +Y+ E NA + N+LNA+N PTQA LGRP
Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANA------QQNLLNAVNGPTQAWLGRP 114
Query 121 LIGDG 125
LIG+G
Sbjct 115 LIGNG 119
>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/126 (58%), Positives = 90/126 (72%), Gaps = 4/126 (3%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
M+ V+V PE V AAASD+A IGS+I AN+A A T +LAAG DEVS AIA+LF HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
+YQ++ ++ AFHD+F L+A G Y SAEA A PL ++LN +NAPTQALLGRP
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPL----QDLLNVVNAPTQALLGRP 116
Query 121 LIGDGA 126
LIGDGA
Sbjct 117 LIGDGA 122
>gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178656|gb|ACC43766.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=2001
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/130 (60%), Positives = 95/130 (74%), Gaps = 0/130 (0%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS VI TP+ +AAAASD+ IGS++G ANSAA TT +LAA DEVS AIA+LF + A+
Sbjct 1 MSYVIATPDMLAAAASDLTNIGSTLGAANSAALARTTGLLAAAEDEVSTAIASLFSASAQ 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQ +ST+ A H F +L+ A +Y +AEA NA+PL TLE NVL A+NAP+QAL RP
Sbjct 61 EYQMVSTRAAHLHAEFVHSLTRAGAAYAAAEAVNASPLQTLEQNVLAAINAPSQALTARP 120
Query 121 LIGDGAAGAP 130
L GDGA GAP
Sbjct 121 LFGDGADGAP 130
>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/126 (58%), Positives = 90/126 (72%), Gaps = 4/126 (3%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
M+ V+V PE V AAASD+A IGS+I AN+A A T +LAAG DEVS AIA+LF HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
+YQ++ ++ AFHD+F L+A G Y SAEA A PL ++LN +NAPTQALLGRP
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPL----QDLLNVVNAPTQALLGRP 116
Query 121 LIGDGA 126
LIGDGA
Sbjct 117 LIGDGA 122
>gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=1657
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 90/125 (72%), Gaps = 4/125 (3%)
Query 4 VIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAREYQ 63
+I TPE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+EYQ
Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60
Query 64 AISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRPLIG 123
A+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRPLIG
Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRPLIG 116
Query 124 DGAAG 128
DGA G
Sbjct 117 DGAHG 121
>gi|148824718|ref|YP_001289472.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148723245|gb|ABR07870.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=1888
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/126 (63%), Positives = 93/126 (74%), Gaps = 6/126 (4%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31620284|emb|CAD95727.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1938
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/126 (63%), Positives = 93/126 (74%), Gaps = 6/126 (4%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114 [Mycobacterium tuberculosis KZN
1435]
gi|253322056|gb|ACT26659.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328460284|gb|AEB05707.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=1767
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/126 (63%), Positives = 93/126 (74%), Gaps = 6/126 (4%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1695
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/126 (63%), Positives = 93/126 (74%), Gaps = 6/126 (4%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224775041|dbj|BAH27847.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=1695
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/126 (63%), Positives = 93/126 (74%), Gaps = 6/126 (4%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1787
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/126 (63%), Positives = 93/126 (74%), Gaps = 6/126 (4%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
>gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332869|emb|CCC28593.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1817
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/126 (63%), Positives = 93/126 (74%), Gaps = 6/126 (4%)
Query 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
MS V+++PE V+AAA D+A +GS+I AN AAA +TT VLAAGADEVSA IA LFG +
Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60
Query 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
EYQAIS QVAA+H +F QTL SY+ AEATN E N+LN +NAPTQ LLGRP
Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNV------EQNLLNLINAPTQTLLGRP 114
Query 121 LIGDGA 126
LIGDGA
Sbjct 115 LIGDGA 120
Lambda K H
0.307 0.140 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1770785067348
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40