BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1455 Length=287 Score E Sequences producing significant alignments: (Bits) Value gi|254231689|ref|ZP_04925016.1| conserved hypothetical protein [... 572 2e-161 gi|15608593|ref|NP_215971.1| hypothetical protein Rv1455 [Mycoba... 572 3e-161 gi|289745204|ref|ZP_06504582.1| conserved hypothetical protein [... 571 5e-161 gi|340626469|ref|YP_004744921.1| hypothetical protein MCAN_14711... 571 5e-161 gi|298524962|ref|ZP_07012371.1| conserved hypothetical protein [... 570 1e-160 gi|308374313|ref|ZP_07667760.1| hypothetical protein TMFG_00548 ... 570 1e-160 gi|15840915|ref|NP_335952.1| hypothetical protein MT1502 [Mycoba... 570 1e-160 gi|308376727|ref|ZP_07668334.1| hypothetical protein TMHG_00644 ... 495 4e-138 gi|289569478|ref|ZP_06449705.1| conserved hypothetical protein [... 458 5e-127 gi|183982273|ref|YP_001850564.1| hypothetical protein MMAR_2260 ... 355 4e-96 gi|240171370|ref|ZP_04750029.1| hypothetical protein MkanA1_1880... 353 2e-95 gi|118617461|ref|YP_905793.1| hypothetical protein MUL_1856 [Myc... 346 3e-93 gi|289757564|ref|ZP_06516942.1| conserved hypothetical protein [... 332 3e-89 gi|120403709|ref|YP_953538.1| hypothetical protein Mvan_2725 [My... 286 2e-75 gi|145224269|ref|YP_001134947.1| hypothetical protein Mflv_3685 ... 277 2e-72 gi|315444604|ref|YP_004077483.1| glutathione synthase/ribosomal ... 273 3e-71 gi|169629839|ref|YP_001703488.1| hypothetical protein MAB_2755c ... 264 1e-68 gi|118472733|ref|YP_887422.1| hypothetical protein MSMEG_3107 [M... 259 3e-67 gi|126435050|ref|YP_001070741.1| hypothetical protein Mjls_2466 ... 238 8e-61 gi|119868508|ref|YP_938460.1| hypothetical protein Mkms_2473 [My... 232 4e-59 gi|254821675|ref|ZP_05226676.1| hypothetical protein MintA_17197... 204 2e-50 gi|118463207|ref|YP_882506.1| hypothetical protein MAV_3323 [Myc... 194 9e-48 gi|336458008|gb|EGO36995.1| hypothetical protein MAPs_17060 [Myc... 192 4e-47 gi|296170685|ref|ZP_06852260.1| conserved hypothetical protein [... 192 5e-47 gi|41407279|ref|NP_960115.1| hypothetical protein MAP1181 [Mycob... 192 5e-47 gi|254775769|ref|ZP_05217285.1| hypothetical protein MaviaA2_140... 187 1e-45 gi|342858745|ref|ZP_08715400.1| hypothetical protein MCOL_07706 ... 187 2e-45 gi|333990900|ref|YP_004523514.1| hypothetical protein JDM601_225... 176 3e-42 gi|108799395|ref|YP_639592.1| hypothetical protein Mmcs_2428 [My... 173 2e-41 gi|300784726|ref|YP_003765017.1| hypothetical protein AMED_2820 ... 156 4e-36 gi|134098736|ref|YP_001104397.1| hypothetical protein SACE_2166 ... 139 5e-31 gi|302551182|ref|ZP_07303524.1| conserved hypothetical protein [... 137 2e-30 gi|257055636|ref|YP_003133468.1| hypothetical protein Svir_16060... 135 7e-30 gi|302525921|ref|ZP_07278263.1| conserved hypothetical protein [... 132 4e-29 gi|329934730|ref|ZP_08284771.1| hypothetical protein SGM_0483 [S... 127 2e-27 gi|297199456|ref|ZP_06916853.1| conserved hypothetical protein [... 125 6e-27 gi|258651743|ref|YP_003200899.1| hypothetical protein Namu_1511 ... 125 1e-26 gi|290960723|ref|YP_003491905.1| hypothetical protein SCAB_63561... 123 3e-26 gi|291439819|ref|ZP_06579209.1| conserved hypothetical protein [... 120 3e-25 gi|336118124|ref|YP_004572892.1| hypothetical protein MLP_24750 ... 117 2e-24 gi|256379182|ref|YP_003102842.1| hypothetical protein Amir_5175 ... 116 3e-24 gi|269955882|ref|YP_003325671.1| hypothetical protein Xcel_1082 ... 114 1e-23 gi|302868776|ref|YP_003837413.1| hypothetical protein Micau_4324... 114 2e-23 gi|315504754|ref|YP_004083641.1| hypothetical protein ML5_3979 [... 112 5e-23 gi|269795777|ref|YP_003315232.1| hypothetical protein Sked_24900... 111 1e-22 gi|256832141|ref|YP_003160868.1| hypothetical protein Jden_0904 ... 110 2e-22 gi|289757562|ref|ZP_06516940.1| conserved hypothetical protein [... 107 3e-21 gi|145595604|ref|YP_001159901.1| hypothetical protein Strop_3086... 105 9e-21 gi|159038854|ref|YP_001538107.1| hypothetical protein Sare_3313 ... 104 1e-20 gi|336321321|ref|YP_004601289.1| hypothetical protein Celgi_2221... 104 2e-20 >gi|254231689|ref|ZP_04925016.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|308231845|ref|ZP_07663948.1| hypothetical protein TMAG_02783 [Mycobacterium tuberculosis SUMu001] gi|308373152|ref|ZP_07667522.1| hypothetical protein TMEG_01358 [Mycobacterium tuberculosis SUMu005] 9 more sequence titles Length=300 Score = 572 bits (1475), Expect = 2e-161, Method: Compositional matrix adjust. Identities = 287/287 (100%), Positives = 287/287 (100%), Gaps = 0/287 (0%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL Sbjct 14 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 73 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP Sbjct 74 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 133 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE Sbjct 134 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 193 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL Sbjct 194 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 253 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP Sbjct 254 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 300 >gi|15608593|ref|NP_215971.1| hypothetical protein Rv1455 [Mycobacterium tuberculosis H37Rv] gi|31792649|ref|NP_855142.1| hypothetical protein Mb1490 [Mycobacterium bovis AF2122/97] gi|121637385|ref|YP_977608.1| hypothetical protein BCG_1516 [Mycobacterium bovis BCG str. Pasteur 1173P2] 44 more sequence titles Length=287 Score = 572 bits (1473), Expect = 3e-161, Method: Compositional matrix adjust. Identities = 287/287 (100%), Positives = 287/287 (100%), Gaps = 0/287 (0%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL Sbjct 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP Sbjct 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE Sbjct 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL Sbjct 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP Sbjct 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 >gi|289745204|ref|ZP_06504582.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289750014|ref|ZP_06509392.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289685732|gb|EFD53220.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289690601|gb|EFD58030.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=294 Score = 571 bits (1471), Expect = 5e-161, Method: Compositional matrix adjust. Identities = 287/287 (100%), Positives = 287/287 (100%), Gaps = 0/287 (0%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL Sbjct 8 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 67 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP Sbjct 68 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 127 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE Sbjct 128 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 187 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL Sbjct 188 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 247 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP Sbjct 248 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 294 >gi|340626469|ref|YP_004744921.1| hypothetical protein MCAN_14711 [Mycobacterium canettii CIPT 140010059] gi|340004659|emb|CCC43803.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=287 Score = 571 bits (1471), Expect = 5e-161, Method: Compositional matrix adjust. Identities = 286/287 (99%), Positives = 287/287 (100%), Gaps = 0/287 (0%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL Sbjct 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP Sbjct 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE Sbjct 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 PSHAFTKQADTWRQTEPDFEIWDVGAAA+AGAAAQVGVDPGELLYARAHITGGSRDPRLL Sbjct 181 PSHAFTKQADTWRQTEPDFEIWDVGAAALAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP Sbjct 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 >gi|298524962|ref|ZP_07012371.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494756|gb|EFI30050.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=287 Score = 570 bits (1468), Expect = 1e-160, Method: Compositional matrix adjust. Identities = 286/287 (99%), Positives = 286/287 (99%), Gaps = 0/287 (0%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLAR DVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL Sbjct 1 MKLARSDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP Sbjct 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE Sbjct 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL Sbjct 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP Sbjct 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 >gi|308374313|ref|ZP_07667760.1| hypothetical protein TMFG_00548 [Mycobacterium tuberculosis SUMu006] gi|308342349|gb|EFP31200.1| hypothetical protein TMFG_00548 [Mycobacterium tuberculosis SUMu006] Length=300 Score = 570 bits (1468), Expect = 1e-160, Method: Compositional matrix adjust. Identities = 286/287 (99%), Positives = 286/287 (99%), Gaps = 0/287 (0%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL Sbjct 14 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 73 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP Sbjct 74 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 133 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGS DETVLVFLGGE Sbjct 134 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSDDETVLVFLGGE 193 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL Sbjct 194 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 253 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP Sbjct 254 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 300 >gi|15840915|ref|NP_335952.1| hypothetical protein MT1502 [Mycobacterium tuberculosis CDC1551] gi|13881119|gb|AAK45766.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=300 Score = 570 bits (1468), Expect = 1e-160, Method: Compositional matrix adjust. Identities = 286/287 (99%), Positives = 286/287 (99%), Gaps = 0/287 (0%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL Sbjct 14 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 73 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP Sbjct 74 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 133 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE Sbjct 134 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 193 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDP ELLYARAHITGGSRDPRLL Sbjct 194 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPXELLYARAHITGGSRDPRLL 253 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP Sbjct 254 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 300 >gi|308376727|ref|ZP_07668334.1| hypothetical protein TMHG_00644 [Mycobacterium tuberculosis SUMu008] gi|308350146|gb|EFP38997.1| hypothetical protein TMHG_00644 [Mycobacterium tuberculosis SUMu008] Length=248 Score = 495 bits (1274), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 247/248 (99%), Positives = 248/248 (100%), Gaps = 0/248 (0%) Query 40 LHAGWLSWDDPEIVHADLVILRATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYL 99 +HAGWLSWDDPEIVHADLVILRATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYL Sbjct 1 MHAGWLSWDDPEIVHADLVILRATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYL 60 Query 100 RDLMDRGVPTVPGEVYVPGEPVRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQ 159 RDLMDRGVPTVPGEVYVPGEPVRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQ Sbjct 61 RDLMDRGVPTVPGEVYVPGEPVRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQ 120 Query 160 AVLVQPGGSGDETVLVFLGGEPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVD 219 AVLVQPGGSGDETVLVFLGGEPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVD Sbjct 121 AVLVQPGGSGDETVLVFLGGEPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVD 180 Query 220 PGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGL 279 PGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGL Sbjct 181 PGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGL 240 Query 280 GPFSHRRP 287 GPFSHRRP Sbjct 241 GPFSHRRP 248 >gi|289569478|ref|ZP_06449705.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|308370726|ref|ZP_07667001.1| hypothetical protein TMCG_03567 [Mycobacterium tuberculosis SUMu003] gi|308378941|ref|ZP_07668867.1| hypothetical protein TMJG_02889 [Mycobacterium tuberculosis SUMu010] gi|289543232|gb|EFD46880.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|308331040|gb|EFP19891.1| hypothetical protein TMCG_03567 [Mycobacterium tuberculosis SUMu003] gi|308358737|gb|EFP47588.1| hypothetical protein TMJG_02889 [Mycobacterium tuberculosis SUMu010] gi|339294431|gb|AEJ46542.1| hypothetical protein CCDC5079_1352 [Mycobacterium tuberculosis CCDC5079] Length=230 Score = 458 bits (1178), Expect = 5e-127, Method: Compositional matrix adjust. Identities = 229/230 (99%), Positives = 230/230 (100%), Gaps = 0/230 (0%) Query 58 VILRATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVP 117 +ILRATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVP Sbjct 1 MILRATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVP 60 Query 118 GEPVRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFL 177 GEPVRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFL Sbjct 61 GEPVRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFL 120 Query 178 GGEPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDP 237 GGEPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDP Sbjct 121 GGEPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDP 180 Query 238 RLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 RLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP Sbjct 181 RLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 230 >gi|183982273|ref|YP_001850564.1| hypothetical protein MMAR_2260 [Mycobacterium marinum M] gi|183175599|gb|ACC40709.1| conserved hypothetical protein [Mycobacterium marinum M] Length=284 Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 198/288 (69%), Positives = 220/288 (77%), Gaps = 5/288 (1%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPRVVLAGWP QPAGDGDDAGLVAALR RGLHA WLSWDDP++ ADLVIL Sbjct 1 MKLARPDVFHPRVVLAGWPHQPAGDGDDAGLVAALRRRGLHAHWLSWDDPDVSGADLVIL 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDY RLDEF+AWT V NLLN VVAWN RRYL DL +RGVPT+P ++ PGE Sbjct 61 RATRDYARRLDEFVAWTGGVRNLLNPPAVVAWNTHRRYLDDLANRGVPTLPSQMCRPGER 120 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARF-AAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGG 179 +R QVFVGP +GTGTRR S AAE+V +LHAAGQ+ LV G E VL+F+GG Sbjct 121 LRSLPAPQVFVGPGVGTGTRRFSDHAKAAEYVDELHAAGQSALVHVGDPVPEAVLIFVGG 180 Query 180 EPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRL 239 PSHAFT Q + RQ EPDFEIWD+GAAA+ AAA GV GELL ARAH+ G RL Sbjct 181 RPSHAFTTQENALRQGEPDFEIWDIGAAALRAAAAAAGVQVGELLCARAHLVG----TRL 236 Query 240 LELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 LELQL+DPSLGW+ LD R+ AQR+FAL VQSAL LGLGPFSHRRP Sbjct 237 LELQLIDPSLGWRRLDTATRDRAQREFALSVQSALGGLGLGPFSHRRP 284 >gi|240171370|ref|ZP_04750029.1| hypothetical protein MkanA1_18806 [Mycobacterium kansasii ATCC 12478] Length=284 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 193/288 (68%), Positives = 220/288 (77%), Gaps = 5/288 (1%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPD+FHPRVVLAGWP+QPAGDGDD GLVAALRHRGLHA WL WDDP++ A LVIL Sbjct 1 MKLARPDIFHPRVVLAGWPRQPAGDGDDVGLVAALRHRGLHAHWLPWDDPDVARAHLVIL 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDY RLDEFL WT VANLLN+ VVAWN +R YL DL RGVPTVPGEV PG+ Sbjct 61 RATRDYAERLDEFLPWTNSVANLLNAPSVVAWNADRGYLEDLDSRGVPTVPGEVCAPGQQ 120 Query 121 VRLPRKGQVFVGPTIGTGTRRCS-ARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGG 179 +RLP G+VF+ PT+GTG RR S AA ++A+ G +V+VQ G ETVL+FLGG Sbjct 121 IRLPYAGRVFISPTVGTGARRFSDPSPAAAYIAERRQGGHSVVVQTAGPDVETVLIFLGG 180 Query 180 EPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRL 239 +PSHAFT D RQ EPDFE W++GAAA+ AAA GV GELL ARAH+ G RL Sbjct 181 QPSHAFTSHDDVLRQGEPDFETWEIGAAALGAAAAACGVGIGELLCARAHLVGA----RL 236 Query 240 LELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 L+LQLVDPSLGW+ LD R+ QR FA+CV+SALERLGLGPFSHRRP Sbjct 237 LDLQLVDPSLGWRRLDASARDRGQRRFAVCVESALERLGLGPFSHRRP 284 >gi|118617461|ref|YP_905793.1| hypothetical protein MUL_1856 [Mycobacterium ulcerans Agy99] gi|118569571|gb|ABL04322.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=284 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 198/288 (69%), Positives = 220/288 (77%), Gaps = 5/288 (1%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPRVVLAGWP QPAGDGDDAGLVAALR RGLHA WLSWDDP+I ADLVIL Sbjct 1 MKLARPDVFHPRVVLAGWPHQPAGDGDDAGLVAALRRRGLHAHWLSWDDPDISGADLVIL 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RATRDY RLDEF+AWT V NLLN VVAWN RRYL DL +RGVPT+P ++ PGE Sbjct 61 RATRDYARRLDEFVAWTGGVRNLLNPPAVVAWNAHRRYLDDLANRGVPTLPSQMCRPGER 120 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARF-AAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGG 179 +R QVF+GP +GTGTRR S AAE+V +LHAAGQ+ LV G E VL+F+GG Sbjct 121 LRSLPAPQVFIGPGVGTGTRRFSDHAKAAEYVDELHAAGQSALVHVGDPVPEAVLIFVGG 180 Query 180 EPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRL 239 PSHAFT Q + RQ EPDFEIWD+GAAA+ AAA GV GELL ARAH+ G RL Sbjct 181 RPSHAFTTQENALRQGEPDFEIWDIGAAALRAAAAAAGVQAGELLCARAHLVG----TRL 236 Query 240 LELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 LELQL+DPSLGW+ LD R+ AQR+FAL VQSAL LGLGPFSHRRP Sbjct 237 LELQLIDPSLGWRRLDTATRDRAQREFALSVQSALGGLGLGPFSHRRP 284 >gi|289757564|ref|ZP_06516942.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289713128|gb|EFD77140.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=173 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%) Query 122 RLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGEP 181 RLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGEP Sbjct 8 RLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGEP 67 Query 182 SHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLLE 241 SHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLLE Sbjct 68 SHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLLE 127 Query 242 LQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 LQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP Sbjct 128 LQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 173 >gi|120403709|ref|YP_953538.1| hypothetical protein Mvan_2725 [Mycobacterium vanbaalenii PYR-1] gi|119956527|gb|ABM13532.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=312 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 174/315 (56%), Positives = 211/315 (67%), Gaps = 31/315 (9%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 M ARPD+FHPR+V AG P P GDGDD+GLV ALR RGLHA WLSWDDP + ADLVIL Sbjct 1 MTPARPDLFHPRIVFAGCPALPEGDGDDSGLVGALRARGLHARWLSWDDPATLDADLVIL 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RA DY RLDEFL WT RVA+LLN VVAWN ++RYL DL GVPTVP + PG+P Sbjct 61 RAAWDYIDRLDEFLDWTRRVAHLLNPPEVVAWNTDKRYLADLAAAGVPTVPSAFFAPGQP 120 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHA-----AGQAVLVQPG----GSGDE 171 VR+P G+V V P++G G+ + RF+ A+ HA AG+ LVQP G+G E Sbjct 121 VRIP-AGEVVVKPSVGAGS-VGALRFSDSLQARAHAEALQDAGRTALVQPYDARVGAG-E 177 Query 172 TVLVFLGGEPSHAFTK--------------QADTW-----RQTEPDFEIWDVGAAAVAGA 212 T LVFLGG+ SHAFTK ++ T+ R +PDFE+WDVG AA+A A Sbjct 178 TALVFLGGQQSHAFTKGPMLPSPGERPVFDESGTYAEEQLRPADPDFELWDVGHAALAAA 237 Query 213 AAQVGVDPGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQS 272 A +G+ +LLYAR + G + DPRLLEL+LV+PSLGW L D+R +R FAL V+S Sbjct 238 AGHLGLASSDLLYARVDLLGDADDPRLLELELVEPSLGWCQLGADVRRRQERRFALEVES 297 Query 273 ALERLGLGPFSHRRP 287 ALER GLGPF+HRRP Sbjct 298 ALERFGLGPFAHRRP 312 >gi|145224269|ref|YP_001134947.1| hypothetical protein Mflv_3685 [Mycobacterium gilvum PYR-GCK] gi|145216755|gb|ABP46159.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=312 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 167/313 (54%), Positives = 199/313 (64%), Gaps = 27/313 (8%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKL RPDVFHPR+VLAG P GDGDD GLV ALR RGLHA WL+WDDPE + ADLVIL Sbjct 1 MKLVRPDVFHPRIVLAGCRALPEGDGDDDGLVEALRARGLHARWLAWDDPETLGADLVIL 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RAT DY R ++FLAW RV++LLN VV WN ++RYL DL GVP VP + PGE Sbjct 61 RATWDYTERPEQFLAWAHRVSHLLNPVEVVGWNTDKRYLSDLAAAGVPVVPSAFFEPGEQ 120 Query 121 VRLPRKGQVFVGPTIGTGT----RRCSARFAAEFVAQLHAAGQAVLVQPGGS--GD-ETV 173 VR+P G+V V P +G G+ R A A L AAG+ LVQP + GD ET Sbjct 121 VRIP-DGEVVVKPAVGAGSVGAERFSDPTHAHAHAAALQAAGRTALVQPYDARIGDGETA 179 Query 174 LVFLGGEPSHAFTK--------------QADTWRQ-----TEPDFEIWDVGAAAVAGAAA 214 LVFL GE SHAFTK + T+ + +PDFE+WD+G A+ AA Sbjct 180 LVFLAGEQSHAFTKGPMLPPPGETPAFDASGTYAEERLAPADPDFELWDLGHRALGAAAD 239 Query 215 QVGVDPGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSAL 274 +G+ + LYAR + GG DPRLLEL+LV+PSLGW+ L R QR FAL V+SAL Sbjct 240 HLGLQTSDFLYARVDVVGGPDDPRLLELELVEPSLGWRQLPDGDRARQQRRFALAVESAL 299 Query 275 ERLGLGPFSHRRP 287 ER GLGPF+HRRP Sbjct 300 ERFGLGPFAHRRP 312 >gi|315444604|ref|YP_004077483.1| glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase) [Mycobacterium sp. Spyr1] gi|315262907|gb|ADT99648.1| glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase) [Mycobacterium sp. Spyr1] Length=312 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 167/313 (54%), Positives = 194/313 (62%), Gaps = 27/313 (8%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKL RPDVFHPR+VLAG P GDGDD GLV ALR RGLHA WL+WDDPE ADLVIL Sbjct 1 MKLVRPDVFHPRIVLAGCRALPEGDGDDDGLVEALRARGLHARWLAWDDPETAGADLVIL 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RAT DY R EFLAW RV++LLN VV WN ++RYL DL GVP VP + PGE Sbjct 61 RATWDYTERPTEFLAWAHRVSHLLNPVEVVGWNTDKRYLADLAAAGVPVVPSAFFEPGEQ 120 Query 121 VRLPRKGQVFVGPTIGTGT----RRCSARFAAEFVAQLHAAGQAVLVQPGGS--GD-ETV 173 V +P G+V V P +G G+ R A A L AAG+ LVQP + GD ET Sbjct 121 VHIP-DGEVVVKPAVGAGSVGAERFSDPTHAHAHAAALQAAGRTALVQPYDTRIGDGETA 179 Query 174 LVFLGGEPSHAFTKQ--------------ADTWRQ-----TEPDFEIWDVGAAAVAGAAA 214 LVFL GE SHAFTK + T+ + +PDFE+WD+G A+ AA Sbjct 180 LVFLAGEQSHAFTKSPMLPPPGETPAFDASGTFAEERLAPADPDFELWDLGHRALGAAAD 239 Query 215 QVGVDPGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSAL 274 +G+ LYAR + GG DPRLLEL+LV+PSLGW+ L R QR FAL V+SAL Sbjct 240 HLGLQTSNFLYARVDVVGGPDDPRLLELELVEPSLGWRQLPDGDRARQQRRFALAVESAL 299 Query 275 ERLGLGPFSHRRP 287 ER GLGPF HRRP Sbjct 300 ERFGLGPFPHRRP 312 >gi|169629839|ref|YP_001703488.1| hypothetical protein MAB_2755c [Mycobacterium abscessus ATCC 19977] gi|169241806|emb|CAM62834.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=321 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 163/315 (52%), Positives = 199/315 (64%), Gaps = 32/315 (10%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 ++L RPD+FHPR+VLAG PQ AGDGDDA LVAALR R LHA WLSWDDPE+ ADLVIL Sbjct 6 VRLGRPDIFHPRIVLAGCPQLVAGDGDDAELVAALRVRDLHARWLSWDDPEMTQADLVIL 65 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RAT DYP RLDEFL W V N+LN PVV WN+++RYL DL G+PTVP + P EP Sbjct 66 RATWDYPERLDEFLTWAGSVRNVLNPLPVVRWNIDKRYLNDLAAAGIPTVPSMFFAPDEP 125 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHA-----AGQAVLVQPG----GSGDE 171 + LP G++ + P + G+ R + RF A+ HA G+ VL+QP E Sbjct 126 IVLP-DGELVIKPAVAGGS-RGAGRFTCPEAARNHAEALQDEGRTVLIQPYDPRVDQHGE 183 Query 172 TVLVFLGGEPSHAFTKQA-------------------DTWRQTEPDFEIWDVGAAAVAGA 212 T LVFL GEPSHAFTK A + +P +W +GAAA+A A Sbjct 184 TALVFLNGEPSHAFTKAALLPPPGTAAEVDESGLFHSERLAPVKPTSALWRLGAAALAAA 243 Query 213 AAQVGVDPGELLYARAHITGG--SRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCV 270 A Q GV +LLYAR + GG DPRLLEL+LV+PSLGW+ L+ + R+LAQR F + V Sbjct 244 ATQCGVAMTDLLYARVDVIGGVADDDPRLLELELVEPSLGWRQLETEERDLAQRKFVIGV 303 Query 271 QSALERLGLGPFSHR 285 + ALERLGLGP R Sbjct 304 EDALERLGLGPLGQR 318 >gi|118472733|ref|YP_887422.1| hypothetical protein MSMEG_3107 [Mycobacterium smegmatis str. MC2 155] gi|118174020|gb|ABK74916.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=312 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 155/310 (50%), Positives = 188/310 (61%), Gaps = 32/310 (10%) Query 8 VFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVILRATRDYP 67 +FHPRVVLA P P GDGDD GLVAALRHRGLHA WLSWDDPE + AD+VILRAT DY Sbjct 1 MFHPRVVLASCPALPEGDGDDDGLVAALRHRGLHARWLSWDDPETLDADVVILRATWDYT 60 Query 68 ARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPR-- 125 RL EFL+WT V NLLN+ +V WN ++RYL DL GVP VP + GE V++P Sbjct 61 ERLPEFLSWTRSVRNLLNAPEIVEWNTDKRYLGDLARLGVPVVPTAFFAVGEEVQIPAGP 120 Query 126 ----KGQVFVGPTIGTGTR---RCSARFAA-EFVAQLHAAGQAVLVQPGG---SGDETVL 174 G++ V P +G G+ R S R A L G+AVLVQP + ET L Sbjct 121 GGRLDGEIVVKPAVGAGSAGALRFSDRVGALAHAVALQGQGKAVLVQPYDPRIADGETAL 180 Query 175 VFLGGEPSHAFTK-------------------QADTWRQTEPDFEIWDVGAAAVAGAAAQ 215 VFLGGE SHAFTK +T +PD ++W VG AV Sbjct 181 VFLGGEESHAFTKGPLLPPPGQSPAFDPSGTYAEETLWPADPDEQVWRVGRLAVWAVTRL 240 Query 216 VGVDPGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALE 275 ++P +LLYAR + GG DPRLLEL+LV+PSLG++ L D R A+R+FAL V+ AL+ Sbjct 241 FDIEPEDLLYARVDVIGGRDDPRLLELELVEPSLGFRQLAADARAGAEREFALGVERALQ 300 Query 276 RLGLGPFSHR 285 R GLGP SHR Sbjct 301 RFGLGPLSHR 310 >gi|126435050|ref|YP_001070741.1| hypothetical protein Mjls_2466 [Mycobacterium sp. JLS] gi|126234850|gb|ABN98250.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=314 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 165/312 (53%), Positives = 201/312 (65%), Gaps = 26/312 (8%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 ++LARPD+FHPR+VLAG P P GDGDD GLV ALR RGLHA WL+WDDP ++ ADLVIL Sbjct 4 VRLARPDLFHPRIVLAGCPALPEGDGDDDGLVDALRTRGLHARWLAWDDPAVLDADLVIL 63 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RAT DY RLDEF WT +V NLLNS VVAWN ++RYL +L RGVPTVP + G+ Sbjct 64 RATWDYIDRLDEFKVWTRQVRNLLNSPDVVAWNTDKRYLVELAQRGVPTVPTRHFGSGDR 123 Query 121 VRLPRKGQVFVGPTIGTGT----RRCSARFAAEFVAQLHAAGQAVLVQPGGS---GDETV 173 V + G+V V P +G G+ R AA A L A G+AVLVQP + ET Sbjct 124 VVV-PDGEVVVKPAVGGGSVGAQRFTDPAAAAAHAAHLQAQGRAVLVQPYDARVEYGETA 182 Query 174 LVFLGGEPSHAFTKQA------------------DTWRQTEPDFEIWDVGAAAVAGAAAQ 215 LVFLG SHAFTK A +T EPDFE+W++G AA+ AAA Sbjct 183 LVFLGSAQSHAFTKAAILPPEGPPVFDVSGTYALETLAPAEPDFELWELGHAALGAAAAA 242 Query 216 VGVDPGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALE 275 +G++ E LYAR + G D R+LE++LV+PSLGW+ LD R +RDFA+ V+ ALE Sbjct 243 LGMEAAEFLYARVDVIGDREDARVLEVELVEPSLGWRQLDAATRADRERDFAIAVEVALE 302 Query 276 RLGLGPFSHRRP 287 RLGLGP SHRRP Sbjct 303 RLGLGPLSHRRP 314 >gi|119868508|ref|YP_938460.1| hypothetical protein Mkms_2473 [Mycobacterium sp. KMS] gi|119694597|gb|ABL91670.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=314 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 166/313 (54%), Positives = 202/313 (65%), Gaps = 28/313 (8%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 ++LARPD+FHPR+VLAG P P GDGDD GLV ALR RGLHA WL+WDDP ++ ADLVIL Sbjct 4 VRLARPDLFHPRIVLAGCPALPEGDGDDDGLVDALRTRGLHARWLAWDDPAVLDADLVIL 63 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RAT DY RLDEF WT +V NLLNS VVAWN ++RYL +L RGVPTVP + G+ Sbjct 64 RATWDYIDRLDEFKVWTRQVRNLLNSPDVVAWNTDKRYLVELAQRGVPTVPTRHFGSGDR 123 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFA-----AEFVAQLHAAGQAVLVQPGGS---GDET 172 V + G+V V P +G G+ + RF A A L A G+AVLVQP + ET Sbjct 124 VVV-PDGEVVVKPAVGGGS-VGAQRFTDPVPAAAHAAHLQAQGRAVLVQPYDARVEYGET 181 Query 173 VLVFLGGEPSHAFTKQA------------------DTWRQTEPDFEIWDVGAAAVAGAAA 214 LVFLGG SHAFTK A +T EPDFE+W++G AA+ AAA Sbjct 182 ALVFLGGAQSHAFTKAAILPPEGPPVFDESGTYALETLAPAEPDFELWELGHAALGAAAA 241 Query 215 QVGVDPGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSAL 274 +G++ E LYAR + G R+LE++LV+PSLGW+ LD R +RDFAL V+ AL Sbjct 242 ALGMEAAEFLYARVDVIGDRAHARVLEVELVEPSLGWRQLDATTRTDRERDFALAVEVAL 301 Query 275 ERLGLGPFSHRRP 287 ERLGLGP SHRRP Sbjct 302 ERLGLGPLSHRRP 314 >gi|254821675|ref|ZP_05226676.1| hypothetical protein MintA_17197 [Mycobacterium intracellulare ATCC 13950] Length=216 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 138/287 (49%), Positives = 158/287 (56%), Gaps = 71/287 (24%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPR+VLAG P + DDAGLV ALR RGLHA WLSWDDP ADLVIL Sbjct 1 MKLARPDVFHPRIVLAG----PGDNPDDAGLVPALRRRGLHARWLSWDDPGTAQADLVIL 56 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RA P R DEFLAWT RV +LLN +AWN RYLRDL D G+PT PG Sbjct 57 RAAPVGPGRRDEFLAWTRRVRHLLNPPDAIAWNFTERYLRDLADDGIPTDPG-------- 108 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 A ++ L+ FLGGE Sbjct 109 -----------------------------------ATARSTLI------------FLGGE 121 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 SHA+ EP+FE WD+ AA+A AA + GV ELLYARA + G RL+ Sbjct 122 RSHAWPG--------EPEFESWDLAYAALAAAAERAGVGARELLYARADVAGD----RLV 169 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 +L LV P LGW+ +D R LAQR FA+ V+S ERLGLGPFSHRRP Sbjct 170 KLDLVAPQLGWRHVDAATRELAQRRFAVAVESGCERLGLGPFSHRRP 216 >gi|118463207|ref|YP_882506.1| hypothetical protein MAV_3323 [Mycobacterium avium 104] gi|118164494|gb|ABK65391.1| conserved hypothetical protein [Mycobacterium avium 104] Length=219 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 134/287 (47%), Positives = 155/287 (55%), Gaps = 75/287 (26%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPR+VLAG DD GLV+ALR RGLHA L W+DPE +HADLVI+ Sbjct 8 MKLARPDVFHPRIVLAG-------RRDDPGLVSALRRRGLHARRLPWEDPETLHADLVIV 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RA D AR DEFLAWT R ++LN +AWN++ YLRDL D GVPT PG Sbjct 61 RAGPDA-ARRDEFLAWTGRPRHVLNPPAALAWNLDAHYLRDLRDGGVPTRPG-------- 111 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 QP S L+FLGG Sbjct 112 ------------------------------------------AQPETS-----LIFLGGA 124 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 SHA+ EP+FE WD+G AA+A AA G+ ELL+ARA + G RL+ Sbjct 125 QSHAWP--------AEPEFESWDLGHAALAVAADHTGIGVPELLFARADLAGD----RLV 172 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 L LV P LGW+ LD R AQR FAL V+SA ERLGLGP SHRRP Sbjct 173 RLDLVAPELGWRHLDTPGREAAQRRFALAVESACERLGLGPLSHRRP 219 >gi|336458008|gb|EGO36995.1| hypothetical protein MAPs_17060 [Mycobacterium avium subsp. paratuberculosis S397] Length=212 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 133/287 (47%), Positives = 153/287 (54%), Gaps = 75/287 (26%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPR+VLAG DD GLV+ALR RGLHA L W+DPE + ADLVI+ Sbjct 1 MKLARPDVFHPRIVLAG-------RRDDPGLVSALRRRGLHARRLPWEDPETLQADLVIV 53 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 R D AR DEFLAWT R +LLN +AWN++ YLRDL D GVPT PG Sbjct 54 RVGPDA-ARRDEFLAWTRRPRHLLNPPAALAWNLDAHYLRDLRDGGVPTRPG-------- 104 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 QP S L+FLGG Sbjct 105 ------------------------------------------AQPDTS-----LIFLGGA 117 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 SHA+ EP+FE WD+G AA+A AA G+ ELL+ARA + G RL+ Sbjct 118 QSHAWP--------AEPEFESWDLGHAALAVAADHTGIGVPELLFARADLAGD----RLV 165 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 L LV P LGW+ LD R AQR FAL V+SA ERLGLGP SHRRP Sbjct 166 RLDLVAPELGWRHLDTPGREAAQRRFALAVESACERLGLGPLSHRRP 212 >gi|296170685|ref|ZP_06852260.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894674|gb|EFG74408.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=218 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 137/287 (48%), Positives = 157/287 (55%), Gaps = 69/287 (24%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPR+VLAG GDDAGLV ALR RGLHA WL+WDDPE + ADLVIL Sbjct 1 MKLARPDVFHPRIVLAG-------TGDDAGLVPALRARGLHARWLAWDDPETLDADLVIL 53 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 R + R EF+AWT RV +LLN VAWN+ RYLRDL GVPT Sbjct 54 RGVGNATDRRAEFVAWTRRVRHLLNPPGAVAWNLGARYLRDLEHDGVPT----------- 102 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 VF GP+ G + LVFLGGE Sbjct 103 --------VFDGPS-------------------------------GRPVAQAALVFLGGE 123 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 SHA+ EP+FE WD+G AA+A AA + G+ ELLYARA + G RL+ Sbjct 124 QSHAWP--------VEPEFEAWDLGRAALAAAAGRAGITARELLYARADVAGD----RLV 171 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 L LV PSLGW LD R +R+FAL V+SA ERLGLGP SHR P Sbjct 172 ALDLVAPSLGWSHLDAATRERVEREFALAVESACERLGLGPLSHRGP 218 >gi|41407279|ref|NP_960115.1| hypothetical protein MAP1181 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395631|gb|AAS03498.1| hypothetical protein MAP_1181 [Mycobacterium avium subsp. paratuberculosis K-10] Length=219 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 133/287 (47%), Positives = 153/287 (54%), Gaps = 75/287 (26%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPR+VLAG DD GLV+ALR RGLHA L W+DPE + ADLVI+ Sbjct 8 MKLARPDVFHPRIVLAG-------RRDDPGLVSALRRRGLHARRLPWEDPETLQADLVIV 60 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 R D AR DEFLAWT R +LLN +AWN++ YLRDL D GVPT PG Sbjct 61 RVGPDA-ARRDEFLAWTRRPRHLLNPPAALAWNLDAHYLRDLRDGGVPTRPG-------- 111 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 QP S L+FLGG Sbjct 112 ------------------------------------------AQPDTS-----LIFLGGA 124 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 SHA+ EP+FE WD+G AA+A AA G+ ELL+ARA + G RL+ Sbjct 125 QSHAWP--------AEPEFESWDLGHAALAVAADHTGIGVPELLFARADLAGD----RLV 172 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 L LV P LGW+ LD R AQR FAL V+SA ERLGLGP SHRRP Sbjct 173 RLDLVAPELGWRHLDTPGREAAQRRFALAVESACERLGLGPLSHRRP 219 >gi|254775769|ref|ZP_05217285.1| hypothetical protein MaviaA2_14025 [Mycobacterium avium subsp. avium ATCC 25291] Length=212 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 135/287 (48%), Positives = 155/287 (55%), Gaps = 75/287 (26%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADLVIL 60 MKLARPDVFHPR+VLAG DD GLV+ALR RGLHA L W+DPE +HADLVI+ Sbjct 1 MKLARPDVFHPRIVLAG-------RRDDPGLVSALRRRGLHARRLPWEDPETLHADLVIV 53 Query 61 RATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP 120 RA D AR DEFLAWT R +LLN +AWN++ YLRDL D GVPT PG Sbjct 54 RAGPDA-ARRDEFLAWTGRPRHLLNPPAALAWNLDAHYLRDLRDGGVPTRPG-------- 104 Query 121 VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFLGGE 180 QP S L+FLGG Sbjct 105 ------------------------------------------AQPETS-----LIFLGGA 117 Query 181 PSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLL 240 SHA+ EP+FE WD+G AA+A AA G+ ELL+ARA + G RL+ Sbjct 118 QSHAWP--------AEPEFESWDLGHAALALAADHTGIGVPELLFARADLAGD----RLV 165 Query 241 ELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 L LV P LGW+ LD R AQR FAL V+SA ERLGLGP SHRRP Sbjct 166 RLDLVAPELGWRHLDTPGREAAQRRFALAVESACERLGLGPLSHRRP 212 >gi|342858745|ref|ZP_08715400.1| hypothetical protein MCOL_07706 [Mycobacterium colombiense CECT 3035] gi|342134449|gb|EGT87629.1| hypothetical protein MCOL_07706 [Mycobacterium colombiense CECT 3035] Length=223 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 136/292 (47%), Positives = 157/292 (54%), Gaps = 76/292 (26%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDG-----DDAGLVAALRHRGLHAGWLSWDDPEIVHA 55 MKL+RPDVFHPR+VLAG AGDG DD GLV ALR RGLHA WLSWDDP+ A Sbjct 1 MKLSRPDVFHPRIVLAG-----AGDGAGDTVDDDGLVGALRRRGLHARWLSWDDPDTAGA 55 Query 56 DLVILRATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVY 115 DLVILRA P R EFLAWT RV LLN VAWN++ RYLRDL G+PT Sbjct 56 DLVILRAVAAAPDRRAEFLAWTRRVRRLLNPPGAVAWNLDERYLRDLEHDGLPT------ 109 Query 116 VPGEPVRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLV 175 A AA A L+ Sbjct 110 ------------------------------------ANAGAAPDASLI------------ 121 Query 176 FLGGEPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSR 235 FLGGE SHA+ EP+FE WD+G AA+A AA + G+ ELL AR + G Sbjct 122 FLGGERSHAWP--------VEPEFESWDLGHAALAAAAQRSGIAARELLCARVDVAG--- 170 Query 236 DPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 RL+ L LV P+LG + L+P R+LA+ FAL V+SA ERLGLGP SHRRP Sbjct 171 -ERLVGLDLVGPALGGRGLNPAARDLARHRFALAVESACERLGLGPLSHRRP 221 >gi|333990900|ref|YP_004523514.1| hypothetical protein JDM601_2259 [Mycobacterium sp. JDM601] gi|333486867|gb|AEF36259.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=231 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 133/290 (46%), Positives = 153/290 (53%), Gaps = 62/290 (21%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDA---GLVAALRHRGLHAGWLSWDDPEIVHADL 57 MKLARPD+FHPR+VLAG P++ D D A GLV ALRHRGLHA L WDDPE + ADL Sbjct 1 MKLARPDIFHPRIVLAGDPRRDDDDSDPADDAGLVHALRHRGLHARRLPWDDPETLEADL 60 Query 58 VILRATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVP 117 VILR+ P R EF AWT RV NLLN VVAWN + RYL DL GVPT PG Sbjct 61 VILRSAGGEPERRAEFTAWTKRVRNLLNPPEVVAWNADPRYLADLQCDGVPTAPGAATA- 119 Query 118 GEPVRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQLHAAGQAVLVQPGGSGDETVLVFL 177 R VF G AG+ Sbjct 120 -------RTALVFFG------------------------AGR------------------ 130 Query 178 GGEPSHAFTKQADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAHITGGSRDP 237 SHAF +PDFE+WD+G AA+ AA ++ + ELLYARA +TG D Sbjct 131 ----SHAFGAAG-----GDPDFELWDLGRAALRAAAERLSIRIEELLYARAEVTGAGADT 181 Query 238 RLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALERLGLGPFSHRRP 287 RL+ L LV P LGW L D + AQR FA V SAL+RLGLGP + RRP Sbjct 182 RLVGLDLVAPDLGWGELGADECDRAQRRFAREVTSALDRLGLGPLAQRRP 231 >gi|108799395|ref|YP_639592.1| hypothetical protein Mmcs_2428 [Mycobacterium sp. MCS] gi|108769814|gb|ABG08536.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length=260 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 129/262 (50%), Positives = 160/262 (62%), Gaps = 28/262 (10%) Query 52 IVHADLVILRATRDYPARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVP 111 ++ ADLVILRAT DY RLDEF WT +V NLLNS VVAWN ++RYL +L RGVPTVP Sbjct 1 MLDADLVILRATWDYIDRLDEFKVWTRQVRNLLNSPDVVAWNTDKRYLVELAQRGVPTVP 60 Query 112 GEVYVPGEPVRLPRKGQVFVGPTIGTGTRRCSARFA-----AEFVAQLHAAGQAVLVQPG 166 + G+ V + G+V V P +G G+ + RF A A L A G+AVLVQP Sbjct 61 TRHFGSGDRVVV-PDGEVVVKPAVGGGSV-GAQRFTDPVPAAAHAAHLQAQGRAVLVQPY 118 Query 167 GS---GDETVLVFLGGEPSHAFTKQA------------------DTWRQTEPDFEIWDVG 205 + ET LVFLGG SHAFTK A +T EPDFE+W++G Sbjct 119 DARVEYGETALVFLGGAQSHAFTKAAILPPEGPPVFDESGTYALETLAPAEPDFELWELG 178 Query 206 AAAVAGAAAQVGVDPGELLYARAHITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRD 265 AA+ AAA +G++ E LYAR + G R+LE++LV+PSLGW+ LD R +RD Sbjct 179 HAALGAAAAALGMEAAEFLYARVDVIGDRAHARVLEVELVEPSLGWRQLDATTRTDRERD 238 Query 266 FALCVQSALERLGLGPFSHRRP 287 FAL V+ ALERLGLGP SHRRP Sbjct 239 FALAVEVALERLGLGPLSHRRP 260 >gi|300784726|ref|YP_003765017.1| hypothetical protein AMED_2820 [Amycolatopsis mediterranei U32] gi|299794240|gb|ADJ44615.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340526149|gb|AEK41354.1| hypothetical protein RAM_14330 [Amycolatopsis mediterranei S699] Length=286 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 112/273 (42%), Positives = 141/273 (52%), Gaps = 27/273 (9%) Query 9 FHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDP-EIVHADLVILRATRDYP 67 P +L G + P+GDGDD +V AL G W WD P + AD VILRAT DY Sbjct 1 MSPTAILVGCAELPSGDGDDDAVVPALSSLGFAVSWAPWDAPADFSSADAVILRATWDYA 60 Query 68 ARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRKG 127 AR EFLAW V +L NS VV WN ++ YL +L+D GVP VP + PG P P Sbjct 61 ARRAEFLAWCESVPSLFNSAAVVRWNTDKSYLVELLDAGVPVVPTSLVSPGSPASFPSSD 120 Query 128 QVFVGPTIGTGTRRCSARF-----AAEFVAQLHAAGQAVLVQPGGSGDET----VLVFLG 178 V V P +G G+R +ARF A+ VA LHA G L+QP S +T LV+LG Sbjct 121 FV-VKPAVGAGSRG-AARFAGGADASAHVAALHAEGHPALIQPYQSSVDTSGELALVYLG 178 Query 179 GEPSHAFTKQA--------------DTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELL 224 G SHAFTK A + P + V + A+A +G+ ELL Sbjct 179 GVYSHAFTKGAMLGSTMDDSGLYLSEKLAPASPPADAVAVAEDVLDAASALLGILRAELL 238 Query 225 YARAHIT-GGSRDPRLLELQLVDPSLGWQWLDP 256 YAR + G P LLEL+L +PSLG++ DP Sbjct 239 YARVDLVRGADGKPLLLELELTEPSLGFRQADP 271 >gi|134098736|ref|YP_001104397.1| hypothetical protein SACE_2166 [Saccharopolyspora erythraea NRRL 2338] gi|291003579|ref|ZP_06561552.1| hypothetical protein SeryN2_03557 [Saccharopolyspora erythraea NRRL 2338] gi|133911359|emb|CAM01472.1| hypothetical protein SACE_2166 [Saccharopolyspora erythraea NRRL 2338] Length=293 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 114/297 (39%), Positives = 145/297 (49%), Gaps = 34/297 (11%) Query 9 FHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPE--IVHADLVILRATRDY 66 PRV+LA + P DGDD L AL G+ A W WDDP ADLV+LRAT DY Sbjct 1 MMPRVLLASCAELPESDGDDTPLTGALAELGVDAAWAPWDDPAAPFAEADLVVLRATWDY 60 Query 67 PARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRK 126 R DEFLAW V L N PVV WN ++ YL +L D GV VP + PGE P + Sbjct 61 APRRDEFLAWCDSVPALANPAPVVRWNTDKSYLAELGDAGVGVVPTRLVRPGERPVWP-E 119 Query 127 GQVFVGPTIGTGTR------RCSARFAAEFVAQLHAAGQAVLVQPG----GSGDETVLVF 176 G + P +G G+R A + LHA G ++QP + ET +VF Sbjct 120 GDFVLKPAVGAGSRGAARFDADDHDAARAHLEILHADGGVAVLQPYQATVDAEGETAMVF 179 Query 177 LGGEPSHAFTKQA----------------DTWRQTEPDFEIWDVGAAAVAGAAAQVGVDP 220 +GG SHAF K A + R + D + A+ A+A + VD Sbjct 180 IGGVFSHAFVKGAMLSDSAAMDSSGLFVTEGLRPADADPALRRAAEDAMDAASALLKVDR 239 Query 221 GELLYARAHIT-GGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSALER 276 ELLYAR + G P LLEL+L +PSLG++ D R+ FA V+SAL R Sbjct 240 AELLYARVDLVRGADGRPLLLELELAEPSLGFRQTDAGARHR----FASAVRSALAR 292 >gi|302551182|ref|ZP_07303524.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302468800|gb|EFL31893.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length=292 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/275 (39%), Positives = 140/275 (51%), Gaps = 29/275 (10%) Query 11 PRVVLAGWPQ--QPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHA--DLVILRATRDY 66 PR+ L + + + D D L ALR G A + WDDPE+ A DL ++R+T DY Sbjct 5 PRIALVTYDPRGEESKDRDLPVLAGALREAGAEAAVVHWDDPEVDWAGFDLALIRSTWDY 64 Query 67 PARLDEFLAWTTR---VANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRL 123 R +EF AW R V L+N VV WN ++RYL L + GVP VP + PG+PV L Sbjct 65 SWRAEEFTAWAERCGQVTRLVNPVDVVRWNADKRYLGRLAEAGVPAVPTRYFAPGDPVEL 124 Query 124 PRKGQVFVGPTIGTGTRRCSARFAAEFVA------QLHAAGQAVLVQPGGSGDET----V 173 P + V PT G G R + A E A ++HA G V+VQP +G ET Sbjct 125 PADHEYVVKPTSGAGARYAARYPAGERDAALRQAERMHAEGFTVMVQPYLTGIETHGERA 184 Query 174 LVFLGGEPSHAFTKQA--------DTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPG--EL 223 L F GG HA K A D + PD W+ AA + A + PG EL Sbjct 185 LQFFGGRLLHASRKGAVLAPDTPYDADKIAHPDLRPWEPTAAELDVAERALAAVPGQPEL 244 Query 224 LYARAH-ITGGSRDPRLLELQLVDPSLGWQWLDPD 257 LYAR +TG +P ++EL+L++P+L + WL PD Sbjct 245 LYARVDLVTGEDGEPCVMELELIEPNL-FLWLHPD 278 >gi|257055636|ref|YP_003133468.1| hypothetical protein Svir_16060 [Saccharomonospora viridis DSM 43017] gi|256585508|gb|ACU96641.1| hypothetical protein Svir_16060 [Saccharomonospora viridis DSM 43017] Length=290 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 108/273 (40%), Positives = 140/273 (52%), Gaps = 29/273 (10%) Query 12 RVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEI--VHADLVILRATRDYPAR 69 +V+ AG + P G GD+ + AL G+ W +WDDP + ADLV+LRAT DY R Sbjct 4 QVIFAGCRELPRGSGDERAVGPALAAVGVELHWAAWDDPNVDFSAADLVVLRATWDYARR 63 Query 70 LDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRKGQV 129 D+FLAW V L NS V WN +RYL DL D GVP VP E+ G+ R P G+ Sbjct 64 RDDFLAWCDSVPTLRNSAAVARWNTHKRYLLDLADAGVPIVPTELVRVGDSPRWP-AGEF 122 Query 130 FVGPTIGTGT---RRCSARF---AAEFVAQLHAAGQAVLVQPG----GSGDETVLVFLGG 179 V P +G G+ RR R AAE +A LHA G+ L+QP + E LVF GG Sbjct 123 VVKPAVGAGSVGARRFGPRQHGPAAEHLAALHAEGREALIQPYQRDVDARGEIALVFFGG 182 Query 180 EPSHAFTKQ---------------ADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELL 224 SHAFTK A+ EP + + + A A +G+ +LL Sbjct 183 VYSHAFTKAAMLVAPDLDGSGLFVAEKLAAAEPGPDFRGLAEDTLDAAVALLGLTRADLL 242 Query 225 YARAH-ITGGSRDPRLLELQLVDPSLGWQWLDP 256 YAR +TG P +LEL+L +PSLG+ DP Sbjct 243 YARVDVVTGEDGAPAVLELELTEPSLGFAQADP 275 >gi|302525921|ref|ZP_07278263.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302434816|gb|EFL06632.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=313 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/268 (38%), Positives = 136/268 (51%), Gaps = 28/268 (10%) Query 14 VLAGWPQQPAGDGDDAGLVAALRHRGLH-AGWLSWDDPEIVHADLVILRATRDYPARLDE 72 + G P GDGD+A ++ AL G + + AD+V+LRA DYP R +E Sbjct 32 IFVGCAALPEGDGDEAAVLPALADLGFTVSWAAWDAAADFSSADIVVLRAAWDYPERREE 91 Query 73 FLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRKGQVFVG 132 FL+W V L N VV WN ++ YL +L+D GVPTVP E+ PGE R P+K V V Sbjct 92 FLSWCEDVPGLSNPAAVVRWNTDKTYLGELLDAGVPTVPVEIVPPGEKPRWPKKPFV-VK 150 Query 133 PTIGTGTRRCSARF------AAEFVAQLHAAGQAVLVQPGGSG----DETVLVFLGGEPS 182 P++G G R +ARF A + + LH G+ LVQP S E + F GG S Sbjct 151 PSVGAGG-RGAARFSSGGADAEQHLRALHEDGRTALVQPYQSSVDNQGEISVTFFGGVYS 209 Query 183 HAFTK---------QADTWRQTE-----PDFEIWDVGAAAVAGAAAQVGVDPGELLYARA 228 HAFTK + +R+ P E+ V A+ A +G+ ELLYAR Sbjct 210 HAFTKFALLESALDSSGLYREERLAAAVPAPEVRAVAEDALDAACGLLGILRAELLYARV 269 Query 229 HITGGSRD-PRLLELQLVDPSLGWQWLD 255 + G P +LEL+L +PSLG++ D Sbjct 270 DLVRGDDGRPLVLELELTEPSLGFRHAD 297 >gi|329934730|ref|ZP_08284771.1| hypothetical protein SGM_0483 [Streptomyces griseoaurantiacus M045] gi|329305552|gb|EGG49408.1| hypothetical protein SGM_0483 [Streptomyces griseoaurantiacus M045] Length=291 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 107/277 (39%), Positives = 146/277 (53%), Gaps = 33/277 (11%) Query 11 PRVVLAGW---PQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHA--DLVILRATRD 65 P + LA + P+ P D D + L++AL G A + WDDPE+ A DLV++R+T D Sbjct 2 PHIALATYRRGPEDPE-DRDLSLLLSALGAAGARAEAVHWDDPEVDWASFDLVLIRSTWD 60 Query 66 YPARLDEFLAWTTRVANLL---NSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVR 122 Y R+ EF AW R A L N PVV WN ++RYL +L GVPTVP PG+PV Sbjct 61 YTLRVAEFTAWAERCARLTRLANPAPVVRWNTDKRYLGELAAAGVPTVPTRYLAPGDPVE 120 Query 123 LPRKGQVFVGPTIGTGTRRCSARFAAE-------FVAQLHAAGQAVLVQPGGSG----DE 171 LP + + PT G G+ R +AR+ E + ++HA G +VQP E Sbjct 121 LPEDREYVIKPTSGAGS-RYAARYTPEARERAVGHLERVHAEGLTAMVQPYLKAIDVTGE 179 Query 172 TVLVFLGGEPSHAFTKQA--------DTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGE- 222 L+FL GE HA K A D + P E W+ A +A A A + PG+ Sbjct 180 RPLLFLDGEFVHASRKGAVLTPGTPYDARKVAHPGLERWEPTEAELAVARAALAAVPGDP 239 Query 223 -LLYARAHITGGSR-DPRLLELQLVDPSLGWQWLDPD 257 LLYAR + G +PR++EL+LV+P+L + WL PD Sbjct 240 ALLYARVDLVDGDEGEPRVMELELVEPNL-FLWLHPD 275 >gi|297199456|ref|ZP_06916853.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197713004|gb|EDY57038.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=290 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 100/268 (38%), Positives = 131/268 (49%), Gaps = 30/268 (11%) Query 11 PRVVLAGWPQ--QPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHA--DLVILRATRDY 66 PR+ L + +P+ D D LVAALR G A + WDD ++ A DL ++R+T DY Sbjct 2 PRIALVTYDPRPEPSKDADLPVLVAALREAGADAQAVFWDDADVDWAGYDLAVIRSTWDY 61 Query 67 PARLDEFLAWTTRVAN---LLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRL 123 R EF+AW R L N VV WN ++RYL +L + GVP VP PG+P L Sbjct 62 SWRAAEFVAWAQRCGKATRLANPAEVVRWNTDKRYLGELAEAGVPVVPTRYLAPGDPADL 121 Query 124 PRKGQVFVGPTIGTGTRRCSARF-------AAEFVAQLHAAGQAVLVQPGGSG----DET 172 P + V PT G G R +AR+ A + ++HA G +VQP G E Sbjct 122 PDDHEYVVKPTSGAGA-RYAARYTPGQHESAVRQLERMHAEGLTAMVQPYMRGIDAAGER 180 Query 173 VLVFLGGEPSHAFTKQA--------DTWRQTEPDFEIWDVGAA--AVAGAAAQVGVDPGE 222 L F GG HA K+A D + P E W A AVA A D E Sbjct 181 ALQFFGGRLLHASRKRAVLAPGTAFDAAKVAHPGLEPWTPTPAEQAVAERALAAVPDAPE 240 Query 223 LLYARAHITGGSR-DPRLLELQLVDPSL 249 LLYAR + G PR++EL+LV+P+L Sbjct 241 LLYARVDLVDGEDGQPRVMELELVEPNL 268 >gi|258651743|ref|YP_003200899.1| hypothetical protein Namu_1511 [Nakamurella multipartita DSM 44233] gi|258554968|gb|ACV77910.1| conserved hypothetical protein [Nakamurella multipartita DSM 44233] Length=298 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 104/257 (41%), Positives = 135/257 (53%), Gaps = 36/257 (14%) Query 25 DGDDAGLVAALRHRGLHAGWLSWDDPEIVHA--DLVILRATRDYPARLDEFLAW---TTR 79 D D+ LV AL G A + WDDP +V + D+V+LR+T DY R DEFLAW T Sbjct 15 DDDEPLLVPALHAAGADAQIVVWDDPAVVWSAFDVVVLRSTWDYTMRRDEFLAWVSATDA 74 Query 80 VANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRKGQVFVGPTIGTGT 139 V L N VV WN ++ YLRDL GVP VP ++PGE LP V PT+ G+ Sbjct 75 VTRLRNRPDVVRWNSDKVYLRDLAALGVPVVPTTFFMPGERPTLPEHTPFVVKPTVSAGS 134 Query 140 RRCSARFAAE--FVAQLHA-----AGQAVLVQPG-GSGD---ETVLVFLGGEPSHAFTKQ 188 R +AR+AA+ VA HA G+ +++QP S D ET +VFLGG SHA +K Sbjct 135 RN-TARYAADERAVALGHARWLLDRGRTIMLQPYVASVDDRGETAMVFLGGRYSHAASKA 193 Query 189 A----------DTWRQTEPDFEIWDVGAAAVAGAAAQVGVDP-----GELLYARAHIT-G 232 A D TE ++ V A+ A+ +D ELLYAR + G Sbjct 194 ALLEPGARASEDKLFATE---KLAPVQASDAERQVAEAVLDAIPFPREELLYARVDLVLG 250 Query 233 GSRDPRLLELQLVDPSL 249 DP +LEL+LV+PSL Sbjct 251 DDGDPAVLELELVEPSL 267 >gi|290960723|ref|YP_003491905.1| hypothetical protein SCAB_63561 [Streptomyces scabiei 87.22] gi|260650249|emb|CBG73365.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=305 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 103/276 (38%), Positives = 134/276 (49%), Gaps = 31/276 (11%) Query 11 PRVVLAGWPQQP--AGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHA--DLVILRATRDY 66 PR+ +A + P + D D LV AL G +A + WDDP A DLV++R+T DY Sbjct 16 PRIAVATYDPGPETSHDRDLPVLVRALGEAGAYAAAVHWDDPAADWAGYDLVVIRSTWDY 75 Query 67 PARLDEFLAWTTRV---ANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRL 123 R EF+AW + L N VV WN ++RYL DL GVP VP PG+PV L Sbjct 76 SWRAAEFVAWAEKTGGATRLANPAGVVRWNTDKRYLGDLAAAGVPVVPTAYLAPGDPVEL 135 Query 124 PRKGQVFVGPTIGTGTRRCSARF-------AAEFVAQLHAAGQAVLVQPGGSG----DET 172 P Q V PT G G R +AR+ A V ++ A G +VQP + E Sbjct 136 PETHQYVVKPTSGAGA-RFAARYTPDQRDTAVRHVERMRAEGLTAMVQPFVTSIDAEGER 194 Query 173 VLVFLGGEPSHAFTKQA--------DTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPG--E 222 L F GG HA K A D + PD W A +A A + PG E Sbjct 195 ALQFFGGRLLHASRKGAVLAPGTAYDADKIAHPDLVPWTPTEAELAVAERALAAVPGKAE 254 Query 223 LLYARAH-ITGGSRDPRLLELQLVDPSLGWQWLDPD 257 LLYAR +TG P ++EL+LV+P+L + WL P+ Sbjct 255 LLYARVDLVTGEDGRPCVMELELVEPNL-FLWLHPE 289 >gi|291439819|ref|ZP_06579209.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291342714|gb|EFE69670.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length=306 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 100/268 (38%), Positives = 126/268 (48%), Gaps = 30/268 (11%) Query 11 PRVVLAGWPQQP--AGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHA--DLVILRATRDY 66 PR+ L P A D D GLV ALR G A + WDD E + DL ++R+T DY Sbjct 17 PRIALVTCRPGPSVAEDRDLPGLVRALREAGAEASAVVWDDEEADWSGFDLAVIRSTWDY 76 Query 67 PARLDEFLAWTTRV---ANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRL 123 R EF AW R L N VV WN ++RYL DL GVP VP PG+P L Sbjct 77 SWRAAEFTAWAERCGRATRLANPADVVRWNTDKRYLGDLAAAGVPVVPTRYLAPGDPADL 136 Query 124 PRKGQVFVGPTIGTGTRRCSARFAAE-------FVAQLHAAGQAVLVQPGGSGDET---- 172 P + V P G G R +AR+A E + ++HA G +VQP G +T Sbjct 137 PADHEYVVKPASGAGA-RFAARYAPEEHDTAVRHLRRMHADGLTAMVQPYVRGIDTAGER 195 Query 173 VLVFLGGEPSHAFTKQA--------DTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPG--E 222 L F GG HA KQA D + P W A A A + PG E Sbjct 196 ALQFFGGRLLHASRKQAVLAPGTPYDERKVAHPGLTAWTPAPAERAVAERALAAVPGAPE 255 Query 223 LLYARAHITGGSR-DPRLLELQLVDPSL 249 LLYAR + G +P ++EL+LV+P+L Sbjct 256 LLYARVDLVDGPDGEPCVMELELVEPNL 283 >gi|336118124|ref|YP_004572892.1| hypothetical protein MLP_24750 [Microlunatus phosphovorus NM-1] gi|334685904|dbj|BAK35489.1| hypothetical protein MLP_24750 [Microlunatus phosphovorus NM-1] Length=287 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 95/261 (37%), Positives = 126/261 (49%), Gaps = 26/261 (9%) Query 11 PRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEI--VHADLVILRATRDYPA 68 PRV LA + P D D ++A L RGL A WDDP+I DLV+LR+ DY Sbjct 7 PRVALATYRALPHLDSDGQRILAGLCARGLDAEACVWDDPDISWTDFDLVLLRSVWDYHH 66 Query 69 RLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRKG- 127 R D+F W V L+NSR VV WN ++RYLRDL GVP VP P L R G Sbjct 67 RWDQFAGWLAHVPTLINSRSVVEWNADKRYLRDLAQLGVPVVPTIYLSPDAEPDLSRLGP 126 Query 128 --QVFVGPTIGTG---TRRCSARFA-AEFVAQLHAAGQAVLVQPGGSGDETV----LVFL 177 V V P I T RC+ A A + ++ ++G+ LVQP +G +T+ LVFL Sbjct 127 LDDVVVKPAISASAQDTYRCTTGTAVAAAMRRITSSGRTALVQPYLAGVDTLGEISLVFL 186 Query 178 GGEPSHAFTK--------QADTWRQTEPDFEIWDVGAAAVAGAAAQVGVDPGELLYARAH 229 G SHAF + + +TEP A + A + P + YAR Sbjct 187 AGSFSHAFRRAPRLRLDHEHALPNRTEPTV----ASGAELDLAHRALVAAPEPVSYARVD 242 Query 230 IT-GGSRDPRLLELQLVDPSL 249 + +P L EL+L++P L Sbjct 243 LLPDADGNPVLSELELIEPGL 263 >gi|256379182|ref|YP_003102842.1| hypothetical protein Amir_5175 [Actinosynnema mirum DSM 43827] gi|255923485|gb|ACU38996.1| conserved hypothetical protein [Actinosynnema mirum DSM 43827] Length=286 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 93/246 (38%), Positives = 117/246 (48%), Gaps = 25/246 (10%) Query 12 RVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWD-DPEIVHADLVILRATRDYPARL 70 +VVL+ P GD DDA LV AL G+HA + WD P ADLV+LR+ DYP +L Sbjct 2 KVVLSTCDPLPDGDVDDAPLVGALADLGVHAEFSVWDAGPAAASADLVVLRSPWDYPEKL 61 Query 71 DEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRKGQVF 130 D FL W + L N VV WN ++ YL +L GV VP + PG PR + Sbjct 62 DAFLPWADSLPALANPAHVVRWNADKAYLVELASDGVAVVPTALATPGF-ADWPRDVEFV 120 Query 131 VGPTIGTGTR---RCSARFAAEFVAQLHAAGQAVLVQPGGSG----DETVLVFLGGEPSH 183 V PT+G+G+R R + A L LVQP SG ET LVF G SH Sbjct 121 VKPTVGSGSRGALRVAPNDVATAERHLAELAAPALVQPYQSGVDSAGETALVFFAGRYSH 180 Query 184 AFTKQADTWRQTEPD----FEIWDVGAAA------------VAGAAAQVGVDPGELLYAR 227 AFTK A T D + + +G AA + A A+ G+ ELLYAR Sbjct 181 AFTKGAMLTEDTAYDETGLYLLERLGPAAPPAAYRRLAEDVLDAATARCGLRRSELLYAR 240 Query 228 AHITGG 233 + G Sbjct 241 VDLIPG 246 >gi|269955882|ref|YP_003325671.1| hypothetical protein Xcel_1082 [Xylanimonas cellulosilytica DSM 15894] gi|269304563|gb|ACZ30113.1| conserved hypothetical protein [Xylanimonas cellulosilytica DSM 15894] Length=302 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 91/281 (33%), Positives = 125/281 (45%), Gaps = 40/281 (14%) Query 12 RVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHA--DLVILRATRDYPAR 69 RV LA P+ D DD L+ AL RG+ A + WDDP + A DLV++R+T DY R Sbjct 5 RVALATCSDLPSLDKDDKPLIPALAQRGVTAEAVVWDDPAVDWAAYDLVVVRSTWDYATR 64 Query 70 LDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGE-------PVR 122 DEFLAW V L N V+ WN ++RYL L + VP +P P R Sbjct 65 HDEFLAWAQTVPRLANPVDVLRWNTDKRYLHALEEASVPVIPTVWLDPSRHFSKRAVHTR 124 Query 123 LPRKGQVFVGPTIGTGTRRC---------SARFAAEFVAQLHAAGQAVLVQPG----GSG 169 +P G V P + G + S A +L + + V++QP S Sbjct 125 MPAFGDFVVKPVVSAGAKDTGRYIPISAQSRAMAITHTMELLDSKRWVMIQPYVTSVDSA 184 Query 170 DETVLVFLGGEPSHAFTKQA-----------------DTWRQTEPDFEIWDVGAAAVAGA 212 ET L ++ GE HA K A + P E V A+ A Sbjct 185 GETCLTYVDGEFQHAARKNALLTGHAQPTKGLGLYLEEKMAPVTPTAEQLAVADQALRVA 244 Query 213 AAQVGVDPGELLYARAHITGGSRDPRLLELQLVDPSLGWQW 253 ++G+D G LLYAR + G P ++EL+L +PSL Q+ Sbjct 245 GQELGLD-GPLLYARVDLVTGEDGPLVIELELAEPSLWMQY 284 >gi|302868776|ref|YP_003837413.1| hypothetical protein Micau_4324 [Micromonospora aurantiaca ATCC 27029] gi|302571635|gb|ADL47837.1| hypothetical protein Micau_4324 [Micromonospora aurantiaca ATCC 27029] Length=305 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 96/270 (36%), Positives = 125/270 (47%), Gaps = 31/270 (11%) Query 11 PRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEI--VHADLVILRATRDYPA 68 PRV + P D DD + L RG+ A WDDP + DLV+LR+ DY Sbjct 12 PRVAFVTCAELPDLDPDDRLALGPLAARGVTAEIAVWDDPAVDWSGYDLVVLRSPWDYAL 71 Query 69 RLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRKGQ 128 R DEF+AW V L+N VVAWN ++RYL +L GVPTVP E PG+ P G+ Sbjct 72 RRDEFVAWARTVPALVNPADVVAWNTDKRYLSELSAAGVPTVPTEWVEPGQAWTPPSGGE 131 Query 129 VFVGPTIGTG---------TRRCSARFAAEFVAQLHAAGQAVLVQPG----GSGDETVLV 175 + P + G T R A V +L AG+ +VQP + ET L+ Sbjct 132 YVIKPAVSAGSQDTGRYDLTDREHRELAPAHVRRLSDAGRVTMVQPYLDAVDTAGETALL 191 Query 176 FLGGEP----SHAFTK----------QADTWRQTEPDFEIWDVGAAAVAGAA-AQVGVDP 220 FL G SHA K +A +++ D + AVA A V P Sbjct 192 FLAGPGGLAFSHAIRKGPMLTGPDLGEAALYKEERIDARVATAEQRAVADKVLAVVPGGP 251 Query 221 GELLYARAH-ITGGSRDPRLLELQLVDPSL 249 LLYAR I G +P L+EL+L +PSL Sbjct 252 DRLLYARVDLIPGPDGEPVLVELELTEPSL 281 >gi|315504754|ref|YP_004083641.1| hypothetical protein ML5_3979 [Micromonospora sp. L5] gi|315411373|gb|ADU09490.1| hypothetical protein ML5_3979 [Micromonospora sp. L5] Length=305 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 95/270 (36%), Positives = 124/270 (46%), Gaps = 31/270 (11%) Query 11 PRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEI--VHADLVILRATRDYPA 68 PRV + P D DD + L RG+ A WDDP + DLV+LR+ DY Sbjct 12 PRVAFVTCAELPDLDPDDRLALGPLTARGVTAEIAVWDDPAVDWSGYDLVVLRSPWDYAL 71 Query 69 RLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRKGQ 128 R DEF+ W V L+N VVAWN ++RYL +L GVPTVP E PG+ P G+ Sbjct 72 RRDEFVTWARTVPALVNPADVVAWNTDKRYLSELAAAGVPTVPTEWVEPGQAWTPPSGGE 131 Query 129 VFVGPTIGTG---------TRRCSARFAAEFVAQLHAAGQAVLVQPG----GSGDETVLV 175 + P + G T R A V +L A +A +VQP + ET L+ Sbjct 132 YVIKPAVSAGSQDTGRYDLTDREHRELAVAHVRRLSDAARATMVQPYLDAVDTAGETALL 191 Query 176 FLGGEP----SHAFTK----------QADTWRQTEPDFEIWDVGAAAVAGAA-AQVGVDP 220 FL G SHA K +A +++ D + AVA A V P Sbjct 192 FLAGPGGLAFSHAIRKGPMLTGPDLGEAALYKEERIDARVATAEQRAVADKVLAVVPGGP 251 Query 221 GELLYARAH-ITGGSRDPRLLELQLVDPSL 249 LLYAR I G +P L+EL+L +PSL Sbjct 252 DRLLYARVDLIPGPDGEPVLVELELTEPSL 281 >gi|269795777|ref|YP_003315232.1| hypothetical protein Sked_24900 [Sanguibacter keddieii DSM 10542] gi|269097962|gb|ACZ22398.1| hypothetical protein Sked_24900 [Sanguibacter keddieii DSM 10542] Length=303 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 96/277 (35%), Positives = 132/277 (48%), Gaps = 40/277 (14%) Query 12 RVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIV--HADLVILRATRDYPAR 69 RV LA P D DD L+ AL RGL A WDDPE+ DLV++R+T DY R Sbjct 5 RVALATCSVLPDLDPDDTPLLGALAERGLDAVAAVWDDPEVDWDSFDLVVVRSTWDYSQR 64 Query 70 LDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPV-------R 122 DEF+AW V +L+N V+AWN ++ YL+ + + G+P V P + R Sbjct 65 QDEFIAWARSVRHLVNDAEVLAWNTDKYYLKTMGEMGIPIVRTLWLDPNRHLTSQAIHTR 124 Query 123 LPRKGQVFVGPTIGTGTRRCSARF-----AAEFVAQLHA-----AGQAVLVQPGGS---- 168 LP G + PT+ G R +AR+ A A LHA +G+ V+VQP + Sbjct 125 LPAHGDYVIKPTVSAGARD-TARYQENTAKARGEAILHARDLLRSGRHVMVQPYQNQVDV 183 Query 169 GDETVLVFLGGEPSHAFTKQADTWRQTEPDFEIW--DVGAAAVAGAAAQ----------- 215 ET L++LGG SHA K A R P ++ ++ A A A Sbjct 184 AGETGLIYLGGTFSHAVRKNAMLSRGHRPTQGLYQEEIMRATEATDAQLALAERALEAAR 243 Query 216 --VGVDPGELLYARAHIT-GGSRDPRLLELQLVDPSL 249 +G +LYAR + G +P LLEL+ +PSL Sbjct 244 EILGDAAATMLYARIDMLPGDDGEPILLELEFTEPSL 280 >gi|256832141|ref|YP_003160868.1| hypothetical protein Jden_0904 [Jonesia denitrificans DSM 20603] gi|256685672|gb|ACV08565.1| conserved hypothetical protein [Jonesia denitrificans DSM 20603] Length=300 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 97/301 (33%), Positives = 138/301 (46%), Gaps = 43/301 (14%) Query 12 RVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIV--HADLVILRATRDYPAR 69 RV L P DD LV AL + A WDDP + DLV++R+TRDY AR Sbjct 5 RVALVTCSDLPDLAPDDQHLVGALAQESIDAVPAVWDDPAVAWDEFDLVVVRSTRDYAAR 64 Query 70 LDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTV------PGEVYVPGE-PVR 122 DEF++W V LLN VV WN+++ YL+++ +RG+P V P + R Sbjct 65 RDEFVSWAKSVPRLLNHADVVEWNIDKYYLKEMEERGIPVVRTLWLDPARHFTSQAIHTR 124 Query 123 LPRKGQVFVGPTIGTGTRRCSARF----------AAEFVAQLHAAGQAVLVQPG----GS 168 LP G + PTI G + +AR+ A V L +G+ V++QP Sbjct 125 LPAFGDYVIKPTISAGAKD-TARYQEATAQARGEAIMHVRDLLLSGRHVMIQPYLKQIDE 183 Query 169 GDETVLVFLGGEPSHAFTKQADTWR------QTEPDFEIWDVG-------AAAVAGAAAQ 215 ET L+F+ G+ SHA K R Q + + + D A AA + Sbjct 184 KGETSLIFIDGQFSHAARKNPMLARGDAPASQYQVEVTVGDGAEPEYVELARKALHAAHE 243 Query 216 VGVDPGELLYARAH-ITGGSRDPRLLELQLVDPSLGWQWLDPDIRNLAQRDFALCVQSAL 274 + D LYAR I + +P LLE++L +P+L + + AQR FA V S L Sbjct 244 ITGDEERFLYARVDLIPSDTGEPVLLEIELTEPTLFF----AENEEAAQR-FAQAVASRL 298 Query 275 E 275 + Sbjct 299 D 299 >gi|289757562|ref|ZP_06516940.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289713126|gb|EFD77138.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=64 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 51/51 (100%), Positives = 51/51 (100%), Gaps = 0/51 (0%) Query 1 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPE 51 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPE Sbjct 14 MKLARPDVFHPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPE 64 >gi|145595604|ref|YP_001159901.1| hypothetical protein Strop_3086 [Salinispora tropica CNB-440] gi|145304941|gb|ABP55523.1| hypothetical protein Strop_3086 [Salinispora tropica CNB-440] Length=307 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 99/281 (36%), Positives = 125/281 (45%), Gaps = 38/281 (13%) Query 10 HPRVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHA--DLVILRATRDYP 67 PRV L P + DD + A L RG+ A + WDDP + A DLV+LR+ DYP Sbjct 12 EPRVALVTCADFPNLESDDRLVHAPLAARGVAAETVIWDDPGVDWAGYDLVVLRSPWDYP 71 Query 68 ARLDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLP-RK 126 AR D F+AW V L N +V WN ++RYL L GV TVP PG LP + Sbjct 72 ARRDAFVAWAATVPALANPADIVRWNTDKRYLEQLSAAGVATVPTAWIEPGRQWSLPAER 131 Query 127 GQVFVGPTIGTGTRRCS---------ARFAAEFVAQLHAAGQAVLVQPGGS----GDETV 173 G+ + P++ +R A V +L AAG+ +VQP S ET Sbjct 132 GEYVIKPSVSADSRDTGRYDLADPEHRELAQAHVRRLGAAGRVTMVQPYLSAVDTNGETA 191 Query 174 LVFLGGEP----SHAFTKQADTWRQTEPDF---------EIWDVGA-----AAVAGAAAQ 215 L+FL G SHA K A T PD I A A A+ Sbjct 192 LLFLAGPDGLRFSHAIRKGA---MLTGPDLGPGSPRNSERITTRTATPEQLAVAEKVLAE 248 Query 216 VGVDPGELLYARAH-ITGGSRDPRLLELQLVDPSLGWQWLD 255 V P LLYAR I G P L+EL+L +PSL + D Sbjct 249 VPGGPERLLYARVDLIPGEGETPLLVELELTEPSLFLGYAD 289 >gi|159038854|ref|YP_001538107.1| hypothetical protein Sare_3313 [Salinispora arenicola CNS-205] gi|157917689|gb|ABV99116.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=305 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/270 (36%), Positives = 127/270 (48%), Gaps = 32/270 (11%) Query 12 RVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIV--HADLVILRATRDYPAR 69 RV L P D DD + A+L RG+ A + WDDP + DLVILR+ DYP+R Sbjct 12 RVALVTCAALPELDDDDRLVHASLAARGVTAEAVVWDDPAVDWGSYDLVILRSPWDYPSR 71 Query 70 LDEFLAWTTRVANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEPVRLPRK-GQ 128 D+F+AW V L N +V WN ++RYL L GV TVP PG+ LP + G+ Sbjct 72 RDDFVAWAATVPALANPADIVRWNTDKRYLDQLSAAGVATVPTTWIEPGQEWALPAEPGE 131 Query 129 VFVGPTIGTGTRRCS---------ARFAAEFVAQLHAAGQAVLVQPGGSG----DETVLV 175 + P++ ++ A V +L AAG+ +VQP S ET L+ Sbjct 132 YVIKPSVSVDSQDTGRYDLADPEHQELARAHVRRLGAAGRVTMVQPYLSSVDTDGETALL 191 Query 176 FLGGEP----SHAFTKQA-----DTWRQTEPDFEIWDVGAAA---VAGAAAQVGVDPG-- 221 FL G SHA K A D ++ + E A VA A + PG Sbjct 192 FLAGPDGLRFSHAIRKGAMLTGPDLGAESPRNPERISARTATPEQVAVAEKTLAAVPGGA 251 Query 222 -ELLYARAH-ITGGSRDPRLLELQLVDPSL 249 LLYAR I GG P L+EL+L +PSL Sbjct 252 ERLLYARVDLIPGGGDAPVLVELELTEPSL 281 >gi|336321321|ref|YP_004601289.1| hypothetical protein Celgi_2221 [Cellvibrio gilvus ATCC 13127] gi|336104902|gb|AEI12721.1| hypothetical protein Celgi_2221 [Cellvibrio gilvus ATCC 13127] Length=317 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/283 (34%), Positives = 128/283 (46%), Gaps = 47/283 (16%) Query 12 RVVLAGWPQQPAGDGDDAGLVAALRHRGLHAGWLSWDDPEIVHADL--VILRATRDYPAR 69 R+ LA + P D DD L AAL+ RG+ + WDDP + V++R+T DY R Sbjct 11 RLALATCAELPELDPDDVPLRAALQERGIATDVVVWDDPTVDWGTYQHVLIRSTWDYSKR 70 Query 70 LDEFLAWTTRV---ANLLNSRPVVAWNVERRYLRDLMDRGVPTVPGEVYVPGEP------ 120 F WT +V + LLN VV WN+++ YLRDL +RG+PTVP P Sbjct 71 PQRFSGWTQQVEASSVLLNPASVVRWNIDKTYLRDLEERGIPTVPTIWLDPARNFDGRAI 130 Query 121 -VRLPRKGQVFVGPTIGTGTRRCSARFAAEFVAQ----------LHAAGQAVLVQ----P 165 R P G V PT+ G+R + R+ A+ Q L G+ V++Q Sbjct 131 HTRFPAFGDFVVKPTVSAGSRD-TGRYRADETPQRSQAITHAKNLLGVGRWVMIQRYLAQ 189 Query 166 GGSGDETVLVFLGGEPSHAFTK------------------QADTWRQTEPDFEIWDVGAA 207 + ET LVF+ GE SHA K + +T EP V Sbjct 190 VDTVGETALVFVEGEFSHAVRKDPLLSGPYREGDLQGVLYREETMTPREPSEAEMAVARR 249 Query 208 AVAGAAAQVGVDPGELLYARAH-ITGGSRDPRLLELQLVDPSL 249 V +G+D G LLYAR I +P LLEL+L +PSL Sbjct 250 VVDALPEVLGLD-GPLLYARVDLIPDDEGEPVLLELELTEPSL 291 Lambda K H 0.322 0.139 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 464609342096 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40