BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1457c

Length=261
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608595|ref|NP_215973.1|  unidentified antibiotic-transport i...   493    1e-137
gi|289761615|ref|ZP_06520993.1|  antibiotic-transport integral me...   491    5e-137
gi|340626471|ref|YP_004744923.1|  putative unidentified antibioti...   491    6e-137
gi|306967563|ref|ZP_07480224.1|  antibiotic-transport membrane AB...   441    4e-122
gi|296170683|ref|ZP_06852258.1|  ABC efflux system [Mycobacterium...   402    3e-110
gi|118468326|ref|YP_887433.1|  ABC transporter [Mycobacterium sme...   371    6e-101
gi|183982275|ref|YP_001850566.1|  antibiotic ABC transporter tran...   366    2e-99 
gi|118617463|ref|YP_905795.1|  antibiotic ABC transporter transme...   366    2e-99 
gi|342858747|ref|ZP_08715402.1|  ABC transporter efflux protein, ...   365    3e-99 
gi|15827235|ref|NP_301498.1|  hypothetical protein ML0589 [Mycoba...   358    5e-97 
gi|240171372|ref|ZP_04750031.1|  antibiotic ABC transporter trans...   353    2e-95 
gi|118462657|ref|YP_882504.1|  ABC transporter efflux protein, Dr...   352    3e-95 
gi|41407281|ref|NP_960117.1|  hypothetical protein MAP1183c [Myco...   350    1e-94 
gi|126435052|ref|YP_001070743.1|  multidrug ABC transporter inner...   347    1e-93 
gi|145224265|ref|YP_001134943.1|  multidrug ABC transporter inner...   344    6e-93 
gi|254775767|ref|ZP_05217283.1|  ABC transporter efflux protein, ...   344    7e-93 
gi|108799399|ref|YP_639596.1|  ABC transporter efflux protein Drr...   344    8e-93 
gi|3560510|gb|AAC82553.1|  unknown [Mycobacterium smegmatis str. ...   343    2e-92 
gi|120403713|ref|YP_953542.1|  multidrug ABC transporter inner me...   341    6e-92 
gi|333990898|ref|YP_004523512.1|  antibiotic ABC transporter tran...   341    7e-92 
gi|254821673|ref|ZP_05226674.1|  antibiotic ABC transporter trans...   340    8e-92 
gi|315444600|ref|YP_004077479.1|  ABC transporter efflux protein,...   340    2e-91 
gi|169629837|ref|YP_001703486.1|  ABC transporter permease [Mycob...   313    2e-83 
gi|54025536|ref|YP_119778.1|  putative ABC transporter membrane p...   310    2e-82 
gi|343924595|ref|ZP_08764143.1|  putative ABC transporter permeas...   283    2e-74 
gi|229493578|ref|ZP_04387363.1|  ABC transporter efflux protein, ...   281    6e-74 
gi|226306538|ref|YP_002766498.1|  ABC transporter permease protei...   281    8e-74 
gi|326382203|ref|ZP_08203895.1|  putative ABC transporter membran...   280    1e-73 
gi|262202306|ref|YP_003273514.1|  ABC drug efflux pump, inner mem...   273    1e-71 
gi|226366389|ref|YP_002784172.1|  ABC transporter permease protei...   270    2e-70 
gi|312139623|ref|YP_004006959.1|  ABC transporter transmembrane p...   263    1e-68 
gi|325676701|ref|ZP_08156375.1|  ABC superfamily ATP binding cass...   262    3e-68 
gi|296140213|ref|YP_003647456.1|  multidrug ABC transporter inner...   260    2e-67 
gi|111024142|ref|YP_707114.1|  ABC transporter permease [Rhodococ...   259    3e-67 
gi|333919567|ref|YP_004493148.1|  putative ABC transporter membra...   255    4e-66 
gi|319947904|ref|ZP_08022089.1|  putative ABC transporter membran...   206    4e-51 
gi|296117939|ref|ZP_06836522.1|  ABC-type efflux system, permease...   197    1e-48 
gi|227549234|ref|ZP_03979283.1|  ABC superfamily ATP binding cass...   190    2e-46 
gi|25028246|ref|NP_738300.1|  hypothetical protein CE1690 [Coryne...   189    5e-46 
gi|227833036|ref|YP_002834743.1|  putative ABC transport system, ...   184    9e-45 
gi|38233885|ref|NP_939652.1|  hypothetical protein DIP1299 [Coryn...   181    7e-44 
gi|225021391|ref|ZP_03710583.1|  hypothetical protein CORMATOL_01...   181    1e-43 
gi|317505954|ref|ZP_07963786.1|  DrrB family ABC transporter effl...   180    2e-43 
gi|334696933|gb|AEG81730.1|  putative membrane protein [Corynebac...   180    2e-43 
gi|305681198|ref|ZP_07404005.1|  ABC transporter efflux protein, ...   179    3e-43 
gi|213965621|ref|ZP_03393815.1|  ABC drug efflux pump, inner memb...   177    1e-42 
gi|337290818|ref|YP_004629839.1|  hypothetical protein CULC22_012...   177    2e-42 
gi|227503590|ref|ZP_03933639.1|  ABC superfamily ATP binding cass...   177    2e-42 
gi|291003575|ref|ZP_06561548.1|  putative ABC-2 type transport sy...   176    3e-42 
gi|306836148|ref|ZP_07469134.1|  ABC superfamily ATP binding cass...   175    6e-42 


>gi|15608595|ref|NP_215973.1| unidentified antibiotic-transport integral membrane ABC transporter 
[Mycobacterium tuberculosis H37Rv]
 gi|15840917|ref|NP_335954.1| ABC-type efflux system, permease protein [Mycobacterium tuberculosis 
CDC1551]
 gi|31792651|ref|NP_855144.1| unidentified antibiotic-transport integral membrane ABC transporter 
[Mycobacterium bovis AF2122/97]
 68 more sequence titles
 Length=261

 Score =  493 bits (1268),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 260/261 (99%), Positives = 261/261 (100%), Gaps = 0/261 (0%)

Query  1    VTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60
            +TQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT
Sbjct  1    MTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60

Query  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120
            LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA
Sbjct  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120

Query  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180
            GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA
Sbjct  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180

Query  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240
            EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI
Sbjct  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240

Query  241  VVLAVWGALAALAALRWFRFT  261
            VVLAVWGALAALAALRWFRFT
Sbjct  241  VVLAVWGALAALAALRWFRFT  261


>gi|289761615|ref|ZP_06520993.1| antibiotic-transport integral membrane ABC transporter [Mycobacterium 
tuberculosis GM 1503]
 gi|289709121|gb|EFD73137.1| antibiotic-transport integral membrane ABC transporter [Mycobacterium 
tuberculosis GM 1503]
Length=261

 Score =  491 bits (1264),  Expect = 5e-137, Method: Compositional matrix adjust.
 Identities = 259/261 (99%), Positives = 260/261 (99%), Gaps = 0/261 (0%)

Query  1    VTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60
            +TQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT
Sbjct  1    MTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60

Query  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120
            LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA
Sbjct  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120

Query  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180
            GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLL GTLRA
Sbjct  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLSGTLRA  180

Query  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240
            EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI
Sbjct  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240

Query  241  VVLAVWGALAALAALRWFRFT  261
            VVLAVWGALAALAALRWFRFT
Sbjct  241  VVLAVWGALAALAALRWFRFT  261


>gi|340626471|ref|YP_004744923.1| putative unidentified antibiotic-transport integral membrane 
ABC transporter [Mycobacterium canettii CIPT 140010059]
 gi|340004661|emb|CCC43805.1| putative unidentified antibiotic-transport integral membrane 
ABC transporter [Mycobacterium canettii CIPT 140010059]
Length=261

 Score =  491 bits (1263),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 258/261 (99%), Positives = 260/261 (99%), Gaps = 0/261 (0%)

Query  1    VTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60
            +TQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT
Sbjct  1    MTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60

Query  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120
            LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA
Sbjct  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120

Query  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180
            GKSLAVVAVVFLQAIILGAIGFALGWRPAL ALTLGAGIIALGTAGFAALGLLLGGTLRA
Sbjct  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALAALTLGAGIIALGTAGFAALGLLLGGTLRA  180

Query  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240
            EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVAR+TPSGALTEALSQAMTVSVDWFGI
Sbjct  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARITPSGALTEALSQAMTVSVDWFGI  240

Query  241  VVLAVWGALAALAALRWFRFT  261
            VVLAVWGALAALAALRWFRFT
Sbjct  241  VVLAVWGALAALAALRWFRFT  261


>gi|306967563|ref|ZP_07480224.1| antibiotic-transport membrane ABC transporter [Mycobacterium 
tuberculosis SUMu009]
 gi|307084031|ref|ZP_07493144.1| antibiotic-transport membrane ABC transporter [Mycobacterium 
tuberculosis SUMu012]
 gi|308373154|ref|ZP_07431207.2| antibiotic-transport membrane ABC transporter [Mycobacterium 
tuberculosis SUMu005]
 gi|308375581|ref|ZP_07444411.2| antibiotic-transport membrane ABC transporter [Mycobacterium 
tuberculosis SUMu007]
 gi|308338651|gb|EFP27502.1| antibiotic-transport membrane ABC transporter [Mycobacterium 
tuberculosis SUMu005]
 gi|308345847|gb|EFP34698.1| antibiotic-transport membrane ABC transporter [Mycobacterium 
tuberculosis SUMu007]
 gi|308354786|gb|EFP43637.1| antibiotic-transport membrane ABC transporter [Mycobacterium 
tuberculosis SUMu009]
 gi|308366332|gb|EFP55183.1| antibiotic-transport membrane ABC transporter [Mycobacterium 
tuberculosis SUMu012]
Length=236

 Score =  441 bits (1135),  Expect = 4e-122, Method: Compositional matrix adjust.
 Identities = 236/236 (100%), Positives = 236/236 (100%), Gaps = 0/236 (0%)

Query  26   MLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFGHNRAATFVPVIMALAVI  85
            MLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFGHNRAATFVPVIMALAVI
Sbjct  1    MLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFGHNRAATFVPVIMALAVI  60

Query  86   STAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIILGAIGFALG  145
            STAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIILGAIGFALG
Sbjct  61   STAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIILGAIGFALG  120

Query  146  WRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVANLMWFVFAGFGALTLESN  205
            WRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVANLMWFVFAGFGALTLESN
Sbjct  121  WRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVANLMWFVFAGFGALTLESN  180

Query  206  VIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGALAALAALRWFRFT  261
            VIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGALAALAALRWFRFT
Sbjct  181  VIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGALAALAALRWFRFT  236


>gi|296170683|ref|ZP_06852258.1| ABC efflux system [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894672|gb|EFG74406.1| ABC efflux system [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=259

 Score =  402 bits (1032),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 230/261 (89%), Positives = 243/261 (94%), Gaps = 2/261 (0%)

Query  1    VTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60
            +T++N   FPAGTF+PDPRPNAVP MLAAQF LELKLLLRNGEQLLLTMFIPITLLVGLT
Sbjct  1    MTESN--VFPAGTFTPDPRPNAVPRMLAAQFGLELKLLLRNGEQLLLTMFIPITLLVGLT  58

Query  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120
            LLP GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA
Sbjct  59   LLPFGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  118

Query  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180
            GKSLAVV VVFLQAI+LGAIGFALGWRPA  AL LGA +IALGTA FAALGLLLGGTLRA
Sbjct  119  GKSLAVVTVVFLQAILLGAIGFALGWRPAPPALALGAAVIALGTACFAALGLLLGGTLRA  178

Query  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240
            EIVLAVANL+WFVFAG GALT+ES +IPT  KW AR+TPSGALTEALS+AM +SVDWFGI
Sbjct  179  EIVLAVANLLWFVFAGLGALTVESGIIPTGVKWAARLTPSGALTEALSRAMALSVDWFGI  238

Query  241  VVLAVWGALAALAALRWFRFT  261
            VVLAVWGA+AALAALRWFRFT
Sbjct  239  VVLAVWGAVAALAALRWFRFT  259


>gi|118468326|ref|YP_887433.1| ABC transporter [Mycobacterium smegmatis str. MC2 155]
 gi|118169613|gb|ABK70509.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium 
smegmatis str. MC2 155]
Length=261

 Score =  371 bits (952),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 209/257 (82%), Positives = 228/257 (89%), Gaps = 2/257 (0%)

Query  5    NRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPM  64
            NR  F  GTF+PDPRP  V  MLAAQF LEL+LLLRNGEQLLLTMFIPITLL+GLTLLP+
Sbjct  7    NR--FAPGTFTPDPRPATVQKMLAAQFGLELRLLLRNGEQLLLTMFIPITLLIGLTLLPL  64

Query  65   GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSL  124
            GSFG +RA  F P IMALAVISTAFTGQAIAVAFDRRYGALKRLGAT LPVWGIIAGKSL
Sbjct  65   GSFGDDRAGAFTPAIMALAVISTAFTGQAIAVAFDRRYGALKRLGATALPVWGIIAGKSL  124

Query  125  AVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVL  184
            AVVAVVFLQA++LGAIG ALGWRP L  L LGA IIALGTAGFAA+GLLLGGTLR+EIVL
Sbjct  125  AVVAVVFLQAVLLGAIGVALGWRPPLAGLALGAVIIALGTAGFAAMGLLLGGTLRSEIVL  184

Query  185  AVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLA  244
            A+ANL+WFVFAGFGALTLE+  +P+A  WVAR+TPSGALTEALSQAMT+SVDWFGI VLA
Sbjct  185  ALANLLWFVFAGFGALTLETEAVPSALAWVARLTPSGALTEALSQAMTLSVDWFGIAVLA  244

Query  245  VWGALAALAALRWFRFT  261
            VWG ++A+ ALR FRFT
Sbjct  245  VWGGVSAVCALRLFRFT  261


>gi|183982275|ref|YP_001850566.1| antibiotic ABC transporter transmembrane protein [Mycobacterium 
marinum M]
 gi|183175601|gb|ACC40711.1| unidentified antibiotic-transport integral membrane ABC transporter 
[Mycobacterium marinum M]
Length=262

 Score =  366 bits (940),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 230/262 (88%), Positives = 245/262 (94%), Gaps = 1/262 (0%)

Query  1    VTQTN-RPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGL  59
            +TQTN    FP GTF+PDPRP+AVP MLAAQF LELKLLLRNGEQLLLTMFIPITLL+GL
Sbjct  1    MTQTNGEGTFPVGTFTPDPRPSAVPRMLAAQFGLELKLLLRNGEQLLLTMFIPITLLIGL  60

Query  60   TLLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGII  119
            TLLP+GSFG +RAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGII
Sbjct  61   TLLPLGSFGQHRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGII  120

Query  120  AGKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLR  179
            AGKSLAVVAVVFLQAI+LGAIGFALGWRPAL AL LG  +IALGTAGFAALGLLLGGTLR
Sbjct  121  AGKSLAVVAVVFLQAIVLGAIGFALGWRPALAALALGGAVIALGTAGFAALGLLLGGTLR  180

Query  180  AEIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFG  239
            AEIVLAVANLMWFVFAGFGALT+E++VIPTA KW AR+TPSGALTEALS+AM +SVDWFG
Sbjct  181  AEIVLAVANLMWFVFAGFGALTVETDVIPTAVKWAARLTPSGALTEALSRAMVLSVDWFG  240

Query  240  IVVLAVWGALAALAALRWFRFT  261
            +VVLAVWG LAALAA RWFRFT
Sbjct  241  VVVLAVWGTLAALAARRWFRFT  262


>gi|118617463|ref|YP_905795.1| antibiotic ABC transporter transmembrane protein [Mycobacterium 
ulcerans Agy99]
 gi|118569573|gb|ABL04324.1| unidentified antibiotic-transport integral membrane ABC transporter 
[Mycobacterium ulcerans Agy99]
Length=262

 Score =  366 bits (940),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 229/262 (88%), Positives = 245/262 (94%), Gaps = 1/262 (0%)

Query  1    VTQTN-RPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGL  59
            +TQTN    FP GTF+PDPRP+AVP MLAAQF LELKLLLRNGEQLLLTMFIPITLL+GL
Sbjct  1    MTQTNGEGTFPVGTFTPDPRPSAVPRMLAAQFGLELKLLLRNGEQLLLTMFIPITLLIGL  60

Query  60   TLLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGII  119
            TLLP+GSFG +RAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGII
Sbjct  61   TLLPLGSFGQHRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGII  120

Query  120  AGKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLR  179
            AGKSLAVVAVVFLQAI+LGAIGFALGWRPAL AL LG  +IALGTAGFAALGLLLGGTLR
Sbjct  121  AGKSLAVVAVVFLQAIVLGAIGFALGWRPALAALALGGAVIALGTAGFAALGLLLGGTLR  180

Query  180  AEIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFG  239
            AEIVLA+ANLMWFVFAGFGALT+E++VIPTA KW AR+TPSGALTEALS+AM +SVDWFG
Sbjct  181  AEIVLAIANLMWFVFAGFGALTVETDVIPTAVKWAARLTPSGALTEALSRAMVLSVDWFG  240

Query  240  IVVLAVWGALAALAALRWFRFT  261
            +VVLAVWG LAALAA RWFRFT
Sbjct  241  VVVLAVWGTLAALAARRWFRFT  262


>gi|342858747|ref|ZP_08715402.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium 
colombiense CECT 3035]
 gi|342134451|gb|EGT87631.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium 
colombiense CECT 3035]
Length=254

 Score =  365 bits (938),  Expect = 3e-99, Method: Compositional matrix adjust.
 Identities = 215/253 (85%), Positives = 228/253 (91%), Gaps = 0/253 (0%)

Query  9    FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFG  68
            FP GTF+PDPRP+AVP MLAAQF LELKLLLRNGEQLLLTMFIPITLLVGLTLLP+GSFG
Sbjct  2    FPPGTFAPDPRPSAVPKMLAAQFGLELKLLLRNGEQLLLTMFIPITLLVGLTLLPLGSFG  61

Query  69   HNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVA  128
             +RAATF PVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVV 
Sbjct  62   QHRAATFTPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVT  121

Query  129  VVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVAN  188
            VVFLQAI+LGAIGFALGWRP  TAL LGA +IALGT  FAALGLLLGGTLRAEIVLAVAN
Sbjct  122  VVFLQAILLGAIGFALGWRPTPTALALGAAVIALGTVVFAALGLLLGGTLRAEIVLAVAN  181

Query  189  LMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGA  248
            L+WFVFAG GALTLE+ + P   K  AR+TPSGALTEALSQAMT+SVDWFG+ VL  WGA
Sbjct  182  LLWFVFAGLGALTLETGITPAGVKLAARLTPSGALTEALSQAMTMSVDWFGVAVLVAWGA  241

Query  249  LAALAALRWFRFT  261
              AL+ALRWFRFT
Sbjct  242  AGALSALRWFRFT  254


>gi|15827235|ref|NP_301498.1| hypothetical protein ML0589 [Mycobacterium leprae TN]
 gi|221229713|ref|YP_002503129.1| hypothetical protein MLBr_00589 [Mycobacterium leprae Br4923]
 gi|466898|gb|AAA17143.1| B1496_F2_59 [Mycobacterium leprae]
 gi|2398711|emb|CAB16176.1| hypothetical protein MLCL536.32 [Mycobacterium leprae]
 gi|13092784|emb|CAC30097.1| putative membrane protein [Mycobacterium leprae]
 gi|219932820|emb|CAR70682.1| putative membrane protein [Mycobacterium leprae Br4923]
Length=265

 Score =  358 bits (918),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 216/260 (84%), Positives = 232/260 (90%), Gaps = 0/260 (0%)

Query  2    TQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTL  61
            T  N P FPAGTF+P+PRPNAV  M+AAQF LELKLLLRNGEQLLLTMFIPITLL+GLTL
Sbjct  6    TLRNSPLFPAGTFTPNPRPNAVTRMVAAQFMLELKLLLRNGEQLLLTMFIPITLLIGLTL  65

Query  62   LPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAG  121
            LP+GSFGH+RA TFVPVIMALAV+S+AFTGQAIAVAFDRRYGALKR GATPLPVWGIIAG
Sbjct  66   LPLGSFGHHRATTFVPVIMALAVVSSAFTGQAIAVAFDRRYGALKRFGATPLPVWGIIAG  125

Query  122  KSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAE  181
            KSLAVV VVFLQAIILGAIG  LGWRPAL  L LGA IIALGTAG AALGLLLGGTLRAE
Sbjct  126  KSLAVVTVVFLQAIILGAIGVMLGWRPALICLALGAAIIALGTAGLAALGLLLGGTLRAE  185

Query  182  IVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIV  241
            IVLAVANLMWFVFAG GALT++ N+I    KW AR+TPSGALTEALSQAMT+SVDWFG++
Sbjct  186  IVLAVANLMWFVFAGLGALTVKMNMISAVVKWAARLTPSGALTEALSQAMTLSVDWFGVI  245

Query  242  VLAVWGALAALAALRWFRFT  261
            +L  WG LAALAAL WFRFT
Sbjct  246  ILTAWGTLAALAALHWFRFT  265


>gi|240171372|ref|ZP_04750031.1| antibiotic ABC transporter transmembrane protein [Mycobacterium 
kansasii ATCC 12478]
Length=259

 Score =  353 bits (905),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 225/258 (88%), Positives = 238/258 (93%), Gaps = 0/258 (0%)

Query  4    TNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
            T+   FP GTF+P+PRPNAV  MLAAQF LELKLLLRNGEQLLLTMFIPITLLVGLTLLP
Sbjct  2    TDNTLFPPGTFTPNPRPNAVSRMLAAQFGLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  61

Query  64   MGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  123
            +GSFG +RAATFVPVIMALAV+STAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS
Sbjct  62   LGSFGQHRAATFVPVIMALAVVSTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  121

Query  124  LAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIV  183
            LAVVAVVFLQAIILGAIGFALGWRPA  AL LGA +IALGTAGFAALGLLLGGTLRAEIV
Sbjct  122  LAVVAVVFLQAIILGAIGFALGWRPAPAALALGAAVIALGTAGFAALGLLLGGTLRAEIV  181

Query  184  LAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVL  243
            LAVANLMWFVFAGFGALTLE+ +IP A KW AR+TPSGALTEALSQAM +SVDWFG++VL
Sbjct  182  LAVANLMWFVFAGFGALTLETTMIPMAIKWAARLTPSGALTEALSQAMILSVDWFGLIVL  241

Query  244  AVWGALAALAALRWFRFT  261
            A WG LAALAA RWFRFT
Sbjct  242  AAWGTLAALAARRWFRFT  259


>gi|118462657|ref|YP_882504.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium 
avium 104]
 gi|118163944|gb|ABK64841.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium 
avium 104]
Length=259

 Score =  352 bits (903),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 217/258 (85%), Positives = 233/258 (91%), Gaps = 0/258 (0%)

Query  4    TNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
            T+   FP GTF+P+PRP+AVP MLAAQ+ LELKLLLRNGEQLLLTMFIPITLLVGLTLLP
Sbjct  2    TDSGVFPVGTFTPNPRPSAVPKMLAAQYGLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  61

Query  64   MGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  123
            +GSFG +RAATF PVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS
Sbjct  62   LGSFGQHRAATFTPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  121

Query  124  LAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIV  183
            LAVV VVFLQAI+LGAIGFALGWRPAL AL LGA +IALGTA FAALGLLLGGTLRAEIV
Sbjct  122  LAVVTVVFLQAILLGAIGFALGWRPALAALALGAAVIALGTAVFAALGLLLGGTLRAEIV  181

Query  184  LAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVL  243
            LA+ANLMWFVFAG GALT++S VIP   KW AR+TPSGALTEALS+AMT+S DWFG+ VL
Sbjct  182  LALANLMWFVFAGLGALTVDSGVIPAGVKWAARLTPSGALTEALSRAMTLSADWFGMAVL  241

Query  244  AVWGALAALAALRWFRFT  261
              WGAL AL ALRWFRFT
Sbjct  242  VAWGALGALGALRWFRFT  259


>gi|41407281|ref|NP_960117.1| hypothetical protein MAP1183c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395633|gb|AAS03500.1| hypothetical protein MAP_1183c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336458010|gb|EGO36997.1| ABC transporter efflux protein, DrrB family [Mycobacterium avium 
subsp. paratuberculosis S397]
Length=259

 Score =  350 bits (897),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 216/258 (84%), Positives = 232/258 (90%), Gaps = 0/258 (0%)

Query  4    TNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
            T+   FP GTF+P+PRP+AVP MLAAQ+ LELKLLLRNGEQLLLTMFIPITLLVGLTLLP
Sbjct  2    TDSGVFPVGTFTPNPRPSAVPKMLAAQYGLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  61

Query  64   MGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  123
            +GSFG +RAATF PVIMALAVIST FTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS
Sbjct  62   LGSFGQHRAATFTPVIMALAVISTTFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  121

Query  124  LAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIV  183
            LAVV VVFLQAI+LGAIGFALGWRPAL AL LGA +IALGTA FAALGLLLGGTLRAEIV
Sbjct  122  LAVVTVVFLQAILLGAIGFALGWRPALAALALGAAVIALGTAVFAALGLLLGGTLRAEIV  181

Query  184  LAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVL  243
            LA+ANLMWFVFAG GALT++S VIP   KW AR+TPSGALTEALS+AMT+S DWFG+ VL
Sbjct  182  LALANLMWFVFAGLGALTVDSGVIPAGVKWAARLTPSGALTEALSRAMTLSADWFGMAVL  241

Query  244  AVWGALAALAALRWFRFT  261
              WGAL AL ALRWFRFT
Sbjct  242  VAWGALGALGALRWFRFT  259


>gi|126435052|ref|YP_001070743.1| multidrug ABC transporter inner membrane protein [Mycobacterium 
sp. JLS]
 gi|126234852|gb|ABN98252.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Mycobacterium 
sp. JLS]
Length=258

 Score =  347 bits (889),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 209/258 (82%), Positives = 226/258 (88%), Gaps = 2/258 (0%)

Query  4    TNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
            TN+  F  GTF+PDPRP AVP MLAAQF LEL+LLLRNGEQLLLTMFIPITLLVGL LLP
Sbjct  3    TNQ--FAPGTFTPDPRPAAVPKMLAAQFGLELRLLLRNGEQLLLTMFIPITLLVGLILLP  60

Query  64   MGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  123
            +G FG +RA TFVP IMALAVISTAFTGQAIAVAFDRRYGALKRLGAT LPVWGIIAGKS
Sbjct  61   LGDFGDDRAGTFVPAIMALAVISTAFTGQAIAVAFDRRYGALKRLGATALPVWGIIAGKS  120

Query  124  LAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIV  183
            LAVVAVVFLQ+++LGAIG ALGWRP +  L LGA IIALGTAGFAALGLLLGGTLRAEIV
Sbjct  121  LAVVAVVFLQSVLLGAIGIALGWRPEVVGLALGAAIIALGTAGFAALGLLLGGTLRAEIV  180

Query  184  LAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVL  243
            LAVANL+WFVFAG GALTLE   +P A  W AR+TPSGALTEAL+QAMT+S+DW G+ VL
Sbjct  181  LAVANLLWFVFAGLGALTLEGQAVPGALAWAARLTPSGALTEALTQAMTLSIDWLGLAVL  240

Query  244  AVWGALAALAALRWFRFT  261
            A WG +AAL ALRWFRFT
Sbjct  241  AAWGGVAALCALRWFRFT  258


>gi|145224265|ref|YP_001134943.1| multidrug ABC transporter inner membrane protein [Mycobacterium 
gilvum PYR-GCK]
 gi|145216751|gb|ABP46155.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Mycobacterium 
gilvum PYR-GCK]
Length=259

 Score =  344 bits (883),  Expect = 6e-93, Method: Compositional matrix adjust.
 Identities = 208/260 (80%), Positives = 229/260 (89%), Gaps = 2/260 (0%)

Query  1    VTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60
            ++  NR  F  GTF+PDPRP  VP MLAAQF+LEL+LLLRNGEQLLLTMFIPITLL+GL 
Sbjct  1    MSVENR--FAPGTFTPDPRPAKVPKMLAAQFALELRLLLRNGEQLLLTMFIPITLLIGLI  58

Query  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120
            LLP+GSFG NRAATFVP IMALAVISTAFTGQAIAVAFDRRYGALKRLGAT LPVWG+IA
Sbjct  59   LLPLGSFGPNRAATFVPAIMALAVISTAFTGQAIAVAFDRRYGALKRLGATALPVWGVIA  118

Query  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180
            GKSLAVV VV LQ+++ GAIGFALGWRP L  L LGA IIALGTA FAALGLLLGGTLRA
Sbjct  119  GKSLAVVTVVSLQSVLFGAIGFALGWRPPLAGLALGALIIALGTAVFAALGLLLGGTLRA  178

Query  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240
            EIVLA+ANL+WFVFAG GAL LE  ++P A +WVAR+TPSGALTEAL QAMT+SVDWFG+
Sbjct  179  EIVLALANLLWFVFAGLGALVLERGMVPAAVQWVARLTPSGALTEALVQAMTLSVDWFGL  238

Query  241  VVLAVWGALAALAALRWFRF  260
            +VLA WGA+AAL ALRWFRF
Sbjct  239  LVLAAWGAVAALCALRWFRF  258


>gi|254775767|ref|ZP_05217283.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium 
avium subsp. avium ATCC 25291]
Length=251

 Score =  344 bits (883),  Expect = 7e-93, Method: Compositional matrix adjust.
 Identities = 213/250 (86%), Positives = 229/250 (92%), Gaps = 0/250 (0%)

Query  12   GTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFGHNR  71
            GTF+P+PRP+AVP MLAAQ+ LELKLLLRNGEQLLLTMFIPITLLVGLTLLP+GSFG +R
Sbjct  2    GTFTPNPRPSAVPKMLAAQYGLELKLLLRNGEQLLLTMFIPITLLVGLTLLPLGSFGQHR  61

Query  72   AATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVF  131
            AATF PVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVV VVF
Sbjct  62   AATFTPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVTVVF  121

Query  132  LQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVANLMW  191
            LQAI+LGAIGFALGWRPAL AL LGA +IALGTA FAALGLLLGGTLRAEIVLA+ANLMW
Sbjct  122  LQAILLGAIGFALGWRPALAALALGAAVIALGTAVFAALGLLLGGTLRAEIVLALANLMW  181

Query  192  FVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGALAA  251
            FVFAG GALT++S VIP   KW AR+TPSGALTEALS+AMT+S DWFG+ VL  WGAL A
Sbjct  182  FVFAGLGALTVDSGVIPAGVKWAARLTPSGALTEALSRAMTLSADWFGMAVLVAWGALGA  241

Query  252  LAALRWFRFT  261
            L +LRWFRFT
Sbjct  242  LGSLRWFRFT  251


>gi|108799399|ref|YP_639596.1| ABC transporter efflux protein DrrB [Mycobacterium sp. MCS]
 gi|119868512|ref|YP_938464.1| multidrug ABC transporter inner membrane protein [Mycobacterium 
sp. KMS]
 gi|108769818|gb|ABG08540.1| ABC transporter, DrrB efflux protein [Mycobacterium sp. MCS]
 gi|119694601|gb|ABL91674.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Mycobacterium 
sp. KMS]
Length=258

 Score =  344 bits (882),  Expect = 8e-93, Method: Compositional matrix adjust.
 Identities = 208/258 (81%), Positives = 224/258 (87%), Gaps = 2/258 (0%)

Query  4    TNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
            TN+  F  GTF+PDPRP AVP MLAAQF LEL+LLLRNGEQLLLTMFIPITLLVGL LLP
Sbjct  3    TNQ--FAPGTFTPDPRPAAVPKMLAAQFGLELRLLLRNGEQLLLTMFIPITLLVGLILLP  60

Query  64   MGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  123
            +G FG +RA TFVP IMALAVISTAFTGQAIAVAFDRRYGALKRLGAT LPVWGIIAGKS
Sbjct  61   LGDFGDDRAGTFVPAIMALAVISTAFTGQAIAVAFDRRYGALKRLGATALPVWGIIAGKS  120

Query  124  LAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIV  183
            LAVVAVVFLQ+++LGAIG ALGWRP +  L LG  IIALGTAGFAALGLLLGGTLRAEIV
Sbjct  121  LAVVAVVFLQSVLLGAIGIALGWRPEVVGLALGGAIIALGTAGFAALGLLLGGTLRAEIV  180

Query  184  LAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVL  243
            LAVANL+WFVFAG GALTLE   +P A  W AR+TPSGALTEAL+QAM +SVDW G+ VL
Sbjct  181  LAVANLLWFVFAGLGALTLEGQAVPGALAWAARLTPSGALTEALTQAMALSVDWLGLAVL  240

Query  244  AVWGALAALAALRWFRFT  261
            A WG +AAL ALRWFRFT
Sbjct  241  AAWGGVAALCALRWFRFT  258


>gi|3560510|gb|AAC82553.1| unknown [Mycobacterium smegmatis str. MC2 155]
Length=236

 Score =  343 bits (879),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 194/236 (83%), Positives = 213/236 (91%), Gaps = 0/236 (0%)

Query  26   MLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFGHNRAATFVPVIMALAVI  85
            MLAAQF LEL+LLLR  +QLLLTMFIPITLL+GLTLLP+GSFG +RA  F P IMALAVI
Sbjct  1    MLAAQFGLELRLLLRTAKQLLLTMFIPITLLIGLTLLPLGSFGDDRAGAFTPAIMALAVI  60

Query  86   STAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIILGAIGFALG  145
            STAFTGQAIAVAFDRRYGALKRLGAT LPVWGIIAGKSLAVVAVVFLQA++LGAIG ALG
Sbjct  61   STAFTGQAIAVAFDRRYGALKRLGATALPVWGIIAGKSLAVVAVVFLQAVLLGAIGVALG  120

Query  146  WRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVANLMWFVFAGFGALTLESN  205
            WRP L  L LGA IIALGTAGFAA+GLLLGGTLR+EIVLA+ANL+WFVFAGFGALTLE+ 
Sbjct  121  WRPPLAGLALGAVIIALGTAGFAAMGLLLGGTLRSEIVLALANLLWFVFAGFGALTLETE  180

Query  206  VIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGALAALAALRWFRFT  261
             +P+A  WVAR+TPSGALTEALSQAMT+SVDWFGI VLAVWG ++A+ ALR FRFT
Sbjct  181  AVPSALAWVARLTPSGALTEALSQAMTLSVDWFGIAVLAVWGGVSAVCALRLFRFT  236


>gi|120403713|ref|YP_953542.1| multidrug ABC transporter inner membrane protein [Mycobacterium 
vanbaalenii PYR-1]
 gi|119956531|gb|ABM13536.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Mycobacterium 
vanbaalenii PYR-1]
Length=259

 Score =  341 bits (875),  Expect = 6e-92, Method: Compositional matrix adjust.
 Identities = 214/261 (82%), Positives = 231/261 (89%), Gaps = 2/261 (0%)

Query  1    VTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60
            +T  NR  F  GTF+PDPRP  VP MLAAQF LEL+LLLRNGEQLLLTMFIPITLLVGLT
Sbjct  1    MTTENR--FTPGTFTPDPRPAPVPRMLAAQFRLELRLLLRNGEQLLLTMFIPITLLVGLT  58

Query  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120
            LLP+GSFG NRAATFVP IMALAVISTAFTGQAIAVAFDRRYGALKRLGAT LPVWGIIA
Sbjct  59   LLPLGSFGDNRAATFVPAIMALAVISTAFTGQAIAVAFDRRYGALKRLGATALPVWGIIA  118

Query  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180
            GKSLAV AVV LQ+I+ GAIGFALGWRP L  L LGA IIALGTA FAALGLLLGGTLRA
Sbjct  119  GKSLAVGAVVILQSILFGAIGFALGWRPPLAGLALGAVIIALGTAVFAALGLLLGGTLRA  178

Query  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240
            EIVLA+ANL+WFVFAG GALTLE+ V+P+  +WVAR+TPSGALTEAL+QAMT S+DWFG+
Sbjct  179  EIVLALANLLWFVFAGLGALTLEAGVVPSTVQWVARLTPSGALTEALTQAMTSSMDWFGL  238

Query  241  VVLAVWGALAALAALRWFRFT  261
             VLAVWGA+A L ALRWFRFT
Sbjct  239  AVLAVWGAVAGLCALRWFRFT  259


>gi|333990898|ref|YP_004523512.1| antibiotic ABC transporter transmembrane protein [Mycobacterium 
sp. JDM601]
 gi|333486866|gb|AEF36258.1| antibiotic ABC transporter transmembrane protein [Mycobacterium 
sp. JDM601]
Length=262

 Score =  341 bits (874),  Expect = 7e-92, Method: Compositional matrix adjust.
 Identities = 185/261 (71%), Positives = 217/261 (84%), Gaps = 3/261 (1%)

Query  4    TNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
            +++  F  GTF+PDPRP  VP MLAAQ+ LEL LLLRNGEQLLLTMFIPITLL+GLT+LP
Sbjct  2    SDQHVFAPGTFTPDPRPAGVPAMLAAQYRLELTLLLRNGEQLLLTMFIPITLLIGLTVLP  61

Query  64   MGSFGH---NRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120
            +G FG     RA T +PVIM+LAVI+TAFTGQAIAVAFDRRYGALKRLGAT LPVWG+I 
Sbjct  62   LGPFGEGHAERATTVLPVIMSLAVIATAFTGQAIAVAFDRRYGALKRLGATALPVWGVIT  121

Query  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180
            GKSL+V  VV LQ+++LG IG ALGWRP    L LGA +IALGTA FAALGLLLGG+LRA
Sbjct  122  GKSLSVATVVLLQSVLLGLIGIALGWRPTPLGLALGAVVIALGTACFAALGLLLGGSLRA  181

Query  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240
            EIVLA+ANLMWFVF GF ALT+E+ ++P A +W+AR+TPSGALTEAL+QA+ VS DWFG+
Sbjct  182  EIVLALANLMWFVFGGFSALTVETELVPGAVRWLARLTPSGALTEALAQALAVSFDWFGV  241

Query  241  VVLAVWGALAALAALRWFRFT  261
             V+  WG LA L A+RWFRF+
Sbjct  242  AVVVAWGLLAGLGAVRWFRFS  262


>gi|254821673|ref|ZP_05226674.1| antibiotic ABC transporter transmembrane protein [Mycobacterium 
intracellulare ATCC 13950]
Length=239

 Score =  340 bits (873),  Expect = 8e-92, Method: Compositional matrix adjust.
 Identities = 209/239 (88%), Positives = 223/239 (94%), Gaps = 0/239 (0%)

Query  23   VPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFGHNRAATFVPVIMAL  82
            +P MLAAQF LELKLLLRNGEQLLLTMFIPITLLVGLTLLP+GSFG +RAATF PVIMAL
Sbjct  1    MPKMLAAQFGLELKLLLRNGEQLLLTMFIPITLLVGLTLLPLGSFGQHRAATFTPVIMAL  60

Query  83   AVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIILGAIGF  142
            AVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVV VVFLQAI+LGAIGF
Sbjct  61   AVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVTVVFLQAILLGAIGF  120

Query  143  ALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVANLMWFVFAGFGALTL  202
            ALGWRPAL AL LGAG+IALGT  FAALGLLLGGTLRAEIVLAVANLMWFVFAG GALT+
Sbjct  121  ALGWRPALLALALGAGVIALGTVVFAALGLLLGGTLRAEIVLAVANLMWFVFAGLGALTV  180

Query  203  ESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGALAALAALRWFRFT  261
            E+++IPT  KW AR+TPSGALTEALSQAMT+SVDWFG++VLA WG L AL+ALRWFRFT
Sbjct  181  ETDIIPTGVKWAARLTPSGALTEALSQAMTMSVDWFGVIVLAAWGTLGALSALRWFRFT  239


>gi|315444600|ref|YP_004077479.1| ABC transporter efflux protein, DrrB family [Mycobacterium sp. 
Spyr1]
 gi|315262903|gb|ADT99644.1| ABC transporter efflux protein, DrrB family [Mycobacterium sp. 
Spyr1]
Length=259

 Score =  340 bits (871),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 206/260 (80%), Positives = 227/260 (88%), Gaps = 2/260 (0%)

Query  1    VTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60
            ++  NR  F  GTF+PDPRP  VP MLAAQF+LEL+LLLRNGEQLLLTMFIPITLL+GL 
Sbjct  1    MSVENR--FAPGTFTPDPRPAKVPKMLAAQFALELRLLLRNGEQLLLTMFIPITLLIGLI  58

Query  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120
            LLP+GSFG NRAATFVP IMALAVISTAFTGQAIAVAFDRRYGALKRLGAT LPVWG+IA
Sbjct  59   LLPLGSFGPNRAATFVPAIMALAVISTAFTGQAIAVAFDRRYGALKRLGATALPVWGVIA  118

Query  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180
            GKSLAVV VV LQ+++ GAIGFALGWRP L  L LGA IIALGTA FAALGLLLGGTLRA
Sbjct  119  GKSLAVVTVVSLQSVLFGAIGFALGWRPPLAGLALGALIIALGTAVFAALGLLLGGTLRA  178

Query  181  EIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGI  240
            EIVLA+ANL+WFVFAG GAL LE  ++P A +WVAR+T SGALTEAL QAMT+SVDWF +
Sbjct  179  EIVLALANLLWFVFAGLGALVLERGMVPAAVQWVARLTASGALTEALVQAMTLSVDWFDL  238

Query  241  VVLAVWGALAALAALRWFRF  260
            +VLA WGA+AAL ALRWFRF
Sbjct  239  LVLAAWGAVAALCALRWFRF  258


>gi|169629837|ref|YP_001703486.1| ABC transporter permease [Mycobacterium abscessus ATCC 19977]
 gi|169241804|emb|CAM62832.1| Probable ABC transporter, permease [Mycobacterium abscessus]
Length=265

 Score =  313 bits (801),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 193/265 (73%), Positives = 218/265 (83%), Gaps = 4/265 (1%)

Query  1    VTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60
            +T T  P F  GTF+PDPRP+AV  ML AQF LELKLLLRNGEQLLLTMFIPITLL+GLT
Sbjct  1    MTDTTTPRFDPGTFTPDPRPSAVHTMLFAQFWLELKLLLRNGEQLLLTMFIPITLLIGLT  60

Query  61   LLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIA  120
            LLP+G F  +R   FVP IMALAVISTAFTGQAIAV FDRRYGALKRLGAT LPVWGIIA
Sbjct  61   LLPLGQFPGSRTDIFVPAIMALAVISTAFTGQAIAVGFDRRYGALKRLGATALPVWGIIA  120

Query  121  GKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRA  180
            GK+LAVV VV LQA ++GAIG ALGWRP    L +GA +IA+GTA F A+GLLLGGTLRA
Sbjct  121  GKALAVVTVVVLQAAVIGAIGGALGWRPHPVGLLVGAVVIAIGTAAFVAMGLLLGGTLRA  180

Query  181  EIVLAVANLMWFVFAGFGALTLE----SNVIPTAFKWVARVTPSGALTEALSQAMTVSVD  236
            EIVLA+ANL+WF+FAG GALTLE    ++ IP A   +AR++PSGAL+EAL+ AMT+SVD
Sbjct  181  EIVLALANLLWFIFAGLGALTLEDGRTTDAIPRAVVLLARLSPSGALSEALAAAMTLSVD  240

Query  237  WFGIVVLAVWGALAALAALRWFRFT  261
            WF I VLAVWGALA   ALRWF+FT
Sbjct  241  WFAIAVLAVWGALAGYGALRWFKFT  265


>gi|54025536|ref|YP_119778.1| putative ABC transporter membrane protein [Nocardia farcinica 
IFM 10152]
 gi|54017044|dbj|BAD58414.1| putative ABC transporter membrane protein [Nocardia farcinica 
IFM 10152]
Length=263

 Score =  310 bits (793),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 168/256 (66%), Positives = 194/256 (76%), Gaps = 2/256 (0%)

Query  5    NRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPM  64
            NR  F  GTF+PDPRP++   ML AQ  +EL LLLRNGEQLLLTMFIPITLLVGLTLLP 
Sbjct  9    NR--FAPGTFAPDPRPSSRAAMLTAQTRIELILLLRNGEQLLLTMFIPITLLVGLTLLPF  66

Query  65   GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSL  124
            G  G  R  T VP +M +AV+STAFTGQAIAV FDRRYGALKRLGAT LP WGIIAGKS 
Sbjct  67   GELGDTRVDTIVPAVMMVAVMSTAFTGQAIAVGFDRRYGALKRLGATALPRWGIIAGKSA  126

Query  125  AVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVL  184
            AV+ VV LQA+ILG IG ALGWRP +  L LGA IIALGTA FAA+GLLLGGTL+AE+VL
Sbjct  127  AVLIVVVLQALILGLIGVALGWRPGVGGLALGAVIIALGTATFAAMGLLLGGTLKAEVVL  186

Query  185  AVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLA  244
            A+AN++WFV  G  ++      +PTA   +AR+ PSGAL E L +A+  SVD FG++VL 
Sbjct  187  ALANILWFVMLGIASVVFVGEDLPTAVTVIARLVPSGALAETLERALAGSVDVFGVLVLL  246

Query  245  VWGALAALAALRWFRF  260
             WGA+    A RWFRF
Sbjct  247  AWGAVTGALAARWFRF  262


>gi|343924595|ref|ZP_08764143.1| putative ABC transporter permease protein [Gordonia alkanivorans 
NBRC 16433]
 gi|343765530|dbj|GAA11069.1| putative ABC transporter permease protein [Gordonia alkanivorans 
NBRC 16433]
Length=267

 Score =  283 bits (724),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 167/265 (64%), Positives = 197/265 (75%), Gaps = 9/265 (3%)

Query  5    NRPA-----FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGL  59
            N PA     FP G F P PRP ++P M+ AQ +LELKLLLRNGEQLLLTMFIPITLL+GL
Sbjct  2    NSPAPGTGLFPEGMFRPAPRPASLPAMITAQSTLELKLLLRNGEQLLLTMFIPITLLIGL  61

Query  60   TLLPMGS-FGH---NRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPV  115
             LLP+ + FG     RA  FVP I+ +AV+STAFTGQAIAV FDRRYGALKRLGATP+P 
Sbjct  62   CLLPINTTFGDGPAERATLFVPAILTVAVMSTAFTGQAIAVGFDRRYGALKRLGATPIPR  121

Query  116  WGIIAGKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLG  175
            WGII GKS+AV+ VV LQ++ILGAIG A GWRP    L +GA +I +GTA FAALGLLLG
Sbjct  122  WGIIIGKSVAVLIVVALQSVILGAIGLAFGWRPDAVGLLIGALVIIVGTACFAALGLLLG  181

Query  176  GTLRAEIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSV  235
            GTL+AE+VLA+ANL+WF F G G+L +  + +P A    AR  PSGAL+EAL  A   S 
Sbjct  182  GTLKAEVVLALANLLWFAFIGLGSLVVVDSNVPGAVHTFARCIPSGALSEALEMAARGSF  241

Query  236  DWFGIVVLAVWGALAALAALRWFRF  260
            D FG+ VL VW A+A   A+RWFRF
Sbjct  242  DAFGVGVLLVWAAVAGTLAVRWFRF  266


>gi|229493578|ref|ZP_04387363.1| ABC transporter efflux protein, DrrB family [Rhodococcus erythropolis 
SK121]
 gi|229319539|gb|EEN85375.1| ABC transporter efflux protein, DrrB family [Rhodococcus erythropolis 
SK121]
Length=284

 Score =  281 bits (719),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 169/257 (66%), Positives = 200/257 (78%), Gaps = 2/257 (0%)

Query  5    NRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPM  64
            NR  F  GTFSPDPRPN+   MLAAQ  LEL LLLRNGEQLLLTMFIPITLL+GL LLP+
Sbjct  30   NR--FEPGTFSPDPRPNSAAKMLAAQTKLELTLLLRNGEQLLLTMFIPITLLIGLCLLPI  87

Query  65   GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSL  124
            G  G +R  T +P +M +AV+STAFTGQAIAV FDRRYGALKRLGATPLP WGIIAGKS 
Sbjct  88   GDLGDSRVDTVLPGVMMVAVMSTAFTGQAIAVGFDRRYGALKRLGATPLPRWGIIAGKSA  147

Query  125  AVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVL  184
            AV+ VV LQ+++LGAIG ALGWRP+   L LGA +IA+GT  FAALGLLLGGTLRAEIVL
Sbjct  148  AVIIVVALQSLLLGAIGLALGWRPSFVELVLGAVVIAIGTVTFAALGLLLGGTLRAEIVL  207

Query  185  AVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLA  244
            A+AN++WF+  G G++   S  +PTA   + R+ PSGAL  AL  A+  S+DWF I+VL 
Sbjct  208  ALANILWFIMVGIGSVVFASGELPTAVHTLVRIVPSGALAHALEAALDTSMDWFSILVLL  267

Query  245  VWGALAALAALRWFRFT  261
            +W A+A + A RWF+FT
Sbjct  268  IWAAVAGVCAARWFKFT  284


>gi|226306538|ref|YP_002766498.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226185655|dbj|BAH33759.1| putative ABC transporter permease protein [Rhodococcus erythropolis 
PR4]
Length=284

 Score =  281 bits (718),  Expect = 8e-74, Method: Compositional matrix adjust.
 Identities = 169/257 (66%), Positives = 200/257 (78%), Gaps = 2/257 (0%)

Query  5    NRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPM  64
            NR  F  GTFSPDPRPN+   MLAAQ  LEL LLLRNGEQLLLTMFIPITLL+GL LLP+
Sbjct  30   NR--FEPGTFSPDPRPNSAAKMLAAQTKLELTLLLRNGEQLLLTMFIPITLLIGLCLLPI  87

Query  65   GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSL  124
            G  G +R  T +P +M +AV+STAFTGQAIAV FDRRYGALKRLGATPLP WGIIAGKS 
Sbjct  88   GDLGDSRVDTVLPGVMMVAVMSTAFTGQAIAVGFDRRYGALKRLGATPLPRWGIIAGKSA  147

Query  125  AVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVL  184
            AV+ VV LQ+++LGAIG ALGWRP+   L LGA +IA+GT  FAALGLLLGGTLRAEIVL
Sbjct  148  AVIIVVALQSLLLGAIGLALGWRPSFVELVLGAVVIAIGTVTFAALGLLLGGTLRAEIVL  207

Query  185  AVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLA  244
            A+AN++WF+  G G++   S  +PTA   + R+ PSGAL  AL  A+  S+DWF I+VL 
Sbjct  208  ALANVLWFIMVGIGSVVFASGELPTAVHTLVRIVPSGALAHALEAALDTSMDWFSILVLL  267

Query  245  VWGALAALAALRWFRFT  261
            +W A+A + A RWF+FT
Sbjct  268  IWAAVAGICAARWFKFT  284


>gi|326382203|ref|ZP_08203895.1| putative ABC transporter membrane protein [Gordonia neofelifaecis 
NRRL B-59395]
 gi|326198933|gb|EGD56115.1| putative ABC transporter membrane protein [Gordonia neofelifaecis 
NRRL B-59395]
Length=266

 Score =  280 bits (716),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 165/264 (63%), Positives = 202/264 (77%), Gaps = 6/264 (2%)

Query  1    VTQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLT  60
            V   NR  FP+GTF+P+P+P  +  MLAAQ  +EL LLLRNGEQLLLTMFIPIT+LVGL+
Sbjct  4    VPAANR--FPSGTFTPNPQPAPLARMLAAQTRMELVLLLRNGEQLLLTMFIPITMLVGLS  61

Query  61   LLPM----GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVW  116
            LLP+    G     RA TFVP I+A+A++STAFTGQAIAV FDRRYGALKRLGATP+P W
Sbjct  62   LLPLTTEAGDTPAARATTFVPAILAVAIMSTAFTGQAIAVGFDRRYGALKRLGATPIPRW  121

Query  117  GIIAGKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGG  176
            GIIAGKSLAV+ VV +Q++I+GAIG A GWRP L  L LGA  IA+GT  FA+LGLLLGG
Sbjct  122  GIIAGKSLAVLIVVVMQSVIIGAIGLAFGWRPGLAGLALGALAIAVGTVAFASLGLLLGG  181

Query  177  TLRAEIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVD  236
            TL+AE+VLA+ NL+WFV  G   L +    +P A + +AR++PSGALTEAL++A+  S D
Sbjct  182  TLKAEVVLALGNLIWFVLLGLAGLVVFDEHVPGAVRTIARLSPSGALTEALTRALESSFD  241

Query  237  WFGIVVLAVWGALAALAALRWFRF  260
             FG  VL VW A+ +  A+RWFRF
Sbjct  242  VFGFCVLIVWAAIGSALAVRWFRF  265


>gi|262202306|ref|YP_003273514.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Gordonia 
bronchialis DSM 43247]
 gi|262085653|gb|ACY21621.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Gordonia 
bronchialis DSM 43247]
Length=274

 Score =  273 bits (699),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 170/261 (66%), Positives = 199/261 (77%), Gaps = 6/261 (2%)

Query  6    RPA--FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
            RP   FP GTF+P P+   +  MLAAQ  LEL+LLLRNGEQLLLTMFIPITLL+GL LLP
Sbjct  13   RPGELFPPGTFAPRPQTAGIAAMLAAQSRLELRLLLRNGEQLLLTMFIPITLLIGLCLLP  72

Query  64   ----MGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGII  119
                +G+    RA  FVP I+ +AV+STAFTGQAIAV FDRRYGALKRLGATP+P WGII
Sbjct  73   VDTGLGTGPAARADVFVPAILTVAVMSTAFTGQAIAVGFDRRYGALKRLGATPIPRWGII  132

Query  120  AGKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLR  179
             GKS+AV+ VV  Q++ILGAIG A GWRPA+  L LGA +IA+GTA FAALGLLLGGTL+
Sbjct  133  VGKSIAVLVVVIAQSVILGAIGVAFGWRPAILGLALGAVVIAIGTACFAALGLLLGGTLK  192

Query  180  AEIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFG  239
            AE+VLA+ANL WF   G G+L +  + +P A  WVAR  PSGALTEAL +A   +VD FG
Sbjct  193  AEVVLALANLAWFALVGIGSLVVLDSRVPDAVWWVARCVPSGALTEALERASHGTVDVFG  252

Query  240  IVVLAVWGALAALAALRWFRF  260
            I VL VW A+AA  A+RWFRF
Sbjct  253  IGVLLVWSAVAAALAVRWFRF  273


>gi|226366389|ref|YP_002784172.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226244879|dbj|BAH55227.1| putative ABC transporter permease protein [Rhodococcus opacus 
B4]
Length=264

 Score =  270 bits (689),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 169/257 (66%), Positives = 196/257 (77%), Gaps = 2/257 (0%)

Query  5    NRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPM  64
            NR  F  GTF+PDPRP+   +ML AQ +LELKLLLRNGEQLLLTMFIPITLL+GL LLP+
Sbjct  10   NR--FAPGTFTPDPRPSGAAVMLRAQTALELKLLLRNGEQLLLTMFIPITLLIGLCLLPI  67

Query  65   GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSL  124
            G  G +R    VP +M +AV+STAFTGQAIAV FDRRYGALKRLGATPLP WGIIAGKS 
Sbjct  68   GDLGTSRVDKVVPAVMMVAVMSTAFTGQAIAVGFDRRYGALKRLGATPLPTWGIIAGKSA  127

Query  125  AVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVL  184
            AVV VV LQ+++LGAIG ALGWRP+   L LGA IIALGT  FAA+GLLLGGTLRA+IVL
Sbjct  128  AVVIVVALQSVLLGAIGLALGWRPSAWGLLLGAVIIALGTVTFAAMGLLLGGTLRADIVL  187

Query  185  AVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLA  244
            A+AN++WFV  G G++   +  +P      AR+ PSGAL  AL  A++ SVD   +VVLA
Sbjct  188  ALANILWFVMVGVGSVVFATGELPWLLHTGARLIPSGALAHALDAALSGSVDLLSVVVLA  247

Query  245  VWGALAALAALRWFRFT  261
            VWGA A   A R FRFT
Sbjct  248  VWGAAAGALAARTFRFT  264


>gi|312139623|ref|YP_004006959.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888962|emb|CBH48275.1| putative ABC-2 type transporter integral membrane subunit [Rhodococcus 
equi 103S]
Length=265

 Score =  263 bits (673),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 158/263 (61%), Positives = 195/263 (75%), Gaps = 4/263 (1%)

Query  1    VTQTNRPA---FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLV  57
            VT   R A   F AGTF+P+P+P     MLA+Q  LEL LLLRNGEQLL+TM IPITLL+
Sbjct  3    VTNHERLADNRFAAGTFAPNPQPAPPARMLASQTKLELTLLLRNGEQLLITMLIPITLLI  62

Query  58   GLTLLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWG  117
            GLTLLP+G FG +R  T VP +M +A++STAFTGQAIAV FDRRYGALKRLGATPLP WG
Sbjct  63   GLTLLPIGDFGTDRVDTIVPAVMMVAIMSTAFTGQAIAVGFDRRYGALKRLGATPLPKWG  122

Query  118  IIAGKSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGT  177
            IIAGKS AVV VV +Q +ILGAIGFALGWRP++  L LGA +IALGT  FA +GLLLGG+
Sbjct  123  IIAGKSAAVVIVVAMQTLILGAIGFALGWRPSVLGLALGAVVIALGTVTFACMGLLLGGS  182

Query  178  LRAEIVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDW  237
            LRAEIVLA+AN++WF  AG G++   ++ I    +  A++ PSGAL +AL  A   +V++
Sbjct  183  LRAEIVLALANILWFAMAGIGSVIF-ADQINDGVRIAAQIVPSGALAQALEDATGGTVNF  241

Query  238  FGIVVLAVWGALAALAALRWFRF  260
              + +LA W A+    A R F+F
Sbjct  242  ACVAILAAWAAVTGFVATRTFKF  264


>gi|325676701|ref|ZP_08156375.1| ABC superfamily ATP binding cassette transporter permease [Rhodococcus 
equi ATCC 33707]
 gi|325552483|gb|EGD22171.1| ABC superfamily ATP binding cassette transporter permease [Rhodococcus 
equi ATCC 33707]
Length=263

 Score =  262 bits (670),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 156/257 (61%), Positives = 193/257 (76%), Gaps = 3/257 (1%)

Query  4    TNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
             NR  F AGTF+P+P+P     MLA+Q  LEL LLLRNGEQLL+TM IPITLL+GLTLLP
Sbjct  9    DNR--FAAGTFAPNPQPAPPARMLASQTKLELTLLLRNGEQLLITMLIPITLLIGLTLLP  66

Query  64   MGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  123
            +G FG +R  T VP +M +A++STAFTGQAIAV FDRRYGALKRLGATPLP WGIIAGKS
Sbjct  67   IGDFGTDRVDTIVPAVMMVAIMSTAFTGQAIAVGFDRRYGALKRLGATPLPKWGIIAGKS  126

Query  124  LAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIV  183
             AVV VV +Q +ILGAIGFALGWRP++  L LGA +IALGT  FA +GLLLGG+LRAEIV
Sbjct  127  AAVVIVVAMQTLILGAIGFALGWRPSVLGLALGAVVIALGTVTFACMGLLLGGSLRAEIV  186

Query  184  LAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVL  243
            LA+AN++WF  AG G++   ++ I    +  A++ PSGAL +AL  A   +V++  + +L
Sbjct  187  LALANILWFAMAGIGSVIF-ADQINDGVRIAAQIVPSGALAQALEDATGGTVNFACVAIL  245

Query  244  AVWGALAALAALRWFRF  260
            A W A+    A R F+F
Sbjct  246  AAWAAVTGFVATRTFKF  262


>gi|296140213|ref|YP_003647456.1| multidrug ABC transporter inner membrane protein [Tsukamurella 
paurometabola DSM 20162]
 gi|296028347|gb|ADG79117.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Tsukamurella 
paurometabola DSM 20162]
Length=261

 Score =  260 bits (664),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 167/259 (65%), Positives = 198/259 (77%), Gaps = 2/259 (0%)

Query  4    TNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
            +    F AGTF+P P+P A   M+AAQ  +EL LLLRNGEQLLLTMFIPI LL+GLT+LP
Sbjct  3    STESRFTAGTFAPAPQPAAPAAMIAAQTRMELTLLLRNGEQLLLTMFIPIALLIGLTVLP  62

Query  64   MGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKS  123
            +G        T VP IMA+AV+STAFTGQAIAV FDRRYGALKRLGATPLP WG+IAGK+
Sbjct  63   IGD-DVLTIDTLVPAIMAVAVMSTAFTGQAIAVGFDRRYGALKRLGATPLPKWGVIAGKT  121

Query  124  LAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIV  183
            LAVV VV LQA+ILGAIGFALGWRP    L LGAG++A+G   FA+LGLLLGGTL+AE+V
Sbjct  122  LAVVIVVGLQALILGAIGFALGWRPDPVGLVLGAGVLAIGVFAFASLGLLLGGTLKAEVV  181

Query  184  LAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMT-VSVDWFGIVV  242
            LA+ANL+WFV +  G+L +    +P A   +AR++PSGALTEAL +A T    D FGI V
Sbjct  182  LALANLLWFVMSAIGSLVVVDRHLPDAVVLLARLSPSGALTEALIRATTGGGPDLFGIAV  241

Query  243  LAVWGALAALAALRWFRFT  261
            L VWG L + AA+R FRFT
Sbjct  242  LLVWGLLGSAAAVRLFRFT  260


>gi|111024142|ref|YP_707114.1| ABC transporter permease [Rhodococcus jostii RHA1]
 gi|110823672|gb|ABG98956.1| possible ABC transporter, permease component [Rhodococcus jostii 
RHA1]
Length=266

 Score =  259 bits (662),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 168/257 (66%), Positives = 195/257 (76%), Gaps = 2/257 (0%)

Query  5    NRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPM  64
            NR  F  GTF+PDPRP+   +ML AQ +LELKLLLRNGEQLLLTMFIPITLL+GL LLP+
Sbjct  12   NR--FAPGTFAPDPRPSGAAVMLRAQTALELKLLLRNGEQLLLTMFIPITLLIGLCLLPI  69

Query  65   GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSL  124
            G  G +R    VP +M +AV+STAFTGQAIAV FDRRYGALKRLGATPLP WGIIAGKS 
Sbjct  70   GDLGTSRVDKVVPAVMMVAVMSTAFTGQAIAVGFDRRYGALKRLGATPLPRWGIIAGKSA  129

Query  125  AVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVL  184
            AVV VV LQ+++LGAIG ALGWRP+   L LGA IIALGT  FAA+GLLLGGTLRA+IVL
Sbjct  130  AVVIVVALQSVLLGAIGLALGWRPSAWGLVLGAVIIALGTVTFAAMGLLLGGTLRADIVL  189

Query  185  AVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLA  244
            A+AN++WFV  G G++   +  +P      AR+ PSGAL  AL  A++ SVD   +VVL 
Sbjct  190  ALANILWFVMVGVGSVVFATGELPWLLHTGARLIPSGALAHALDAALSGSVDLLSVVVLV  249

Query  245  VWGALAALAALRWFRFT  261
            VWGA A   A R FRFT
Sbjct  250  VWGAAAGALAARTFRFT  266


>gi|333919567|ref|YP_004493148.1| putative ABC transporter membrane protein [Amycolicicoccus subflavus 
DQS3-9A1]
 gi|333481788|gb|AEF40348.1| Putative ABC transporter membrane protein [Amycolicicoccus subflavus 
DQS3-9A1]
Length=271

 Score =  255 bits (652),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 152/262 (59%), Positives = 182/262 (70%), Gaps = 4/262 (1%)

Query  2    TQTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTL  61
            T+     FPAGTF+P P+P+    MLAAQ  LEL LLLRNGEQLLLTM IPI+LL+G  +
Sbjct  8    TRVTANRFPAGTFTPSPQPSRPLPMLAAQTRLELVLLLRNGEQLLLTMLIPISLLIGFAV  67

Query  62   LPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAG  121
            LP+G  G +R    VP I+ALA++STAFTGQAIAV FDRRYGALKRLGAT LP W II G
Sbjct  68   LPIGDLGESRTNAIVPGILALAIMSTAFTGQAIAVGFDRRYGALKRLGATALPKWAIIGG  127

Query  122  KSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAE  181
            KS AVV VV LQ ++L AIG ALGWRP+L  L L    +ALGT  FAA+GL +GG LRAE
Sbjct  128  KSCAVVLVVCLQMVLLVAIGVALGWRPSLAGLALAVPAVALGTVAFAAMGLFIGGWLRAE  187

Query  182  IVLAVANLMWFVFAGFGALTLESNVIPTAFKWV----ARVTPSGALTEALSQAMTVSVDW  237
            IVLA+AN++WF  AG G+L + + +    F  +    AR+TPSGAL E+L+ A   + D 
Sbjct  188  IVLALANILWFALAGVGSLVIAARLYGEEFPGLAHAFARITPSGALVESLAMAFDGAADV  247

Query  238  FGIVVLAVWGALAALAALRWFR  259
             G  VLA W A  A  A R FR
Sbjct  248  TGYAVLAAWAAACAFGAFRTFR  269


>gi|319947904|ref|ZP_08022089.1| putative ABC transporter membrane protein [Dietzia cinnamea P4]
 gi|319438447|gb|EFV93382.1| putative ABC transporter membrane protein [Dietzia cinnamea P4]
Length=263

 Score =  206 bits (523),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 129/257 (51%), Positives = 163/257 (64%), Gaps = 2/257 (0%)

Query  5    NRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPM  64
            NR  F  GTF+    P +V  M AAQ  +EL L LRNGEQLL+ + IP+ +L  LT +  
Sbjct  9    NR--FAPGTFARPSAPASVARMAAAQTRMELALFLRNGEQLLVALVIPVAILFALTAVEF  66

Query  65   GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSL  124
            G+    R    +  ++ ++V+ TAFTGQAIAV FDRRYGALKRLG TPLP   I+AGK L
Sbjct  67   GAVPEPRIDHAITAVLTISVMGTAFTGQAIAVGFDRRYGALKRLGGTPLPPAVIVAGKML  126

Query  125  AVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVL  184
            A + +V  QA+ILG I   LGWRP L  L+LGA  +ALG+  F+++GLLLGGTLRAEIVL
Sbjct  127  ATLVLVAGQAVILGVIAAVLGWRPDLAGLSLGAVAVALGSVAFSSMGLLLGGTLRAEIVL  186

Query  185  AVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLA  244
            A+ANL+WFV  G   L +    +PTA   +  V PS ALT AL  A    V     + LA
Sbjct  187  ALANLIWFVLIGGAGLAIGVVDLPTAVHDLLVVVPSYALTTALVTATGGGVPALAALSLA  246

Query  245  VWGALAALAALRWFRFT  261
            +W A+    A+R F FT
Sbjct  247  LWTAVCGGFAVRHFSFT  263


>gi|296117939|ref|ZP_06836522.1| ABC-type efflux system, permease protein [Corynebacterium ammoniagenes 
DSM 20306]
 gi|295969170|gb|EFG82412.1| ABC-type efflux system, permease protein [Corynebacterium ammoniagenes 
DSM 20306]
Length=269

 Score =  197 bits (501),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 118/255 (47%), Positives = 165/255 (65%), Gaps = 5/255 (1%)

Query  7    PAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPM-G  65
            P+F  GTF+PD + +++  M+ AQ ++E KL+LR+GEQ LL++ IP+ LL+   + P+  
Sbjct  17   PSFAPGTFTPDAKASSISTMITAQGAMEAKLMLRHGEQQLLSIIIPLGLLIAFRVFPITD  76

Query  66   SFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLA  125
            SFG   AA  +P++ A+A  S  FTGQAIAVAFDRRYGALKR GA+ +P W IIAGK +A
Sbjct  77   SFGGIDAA--IPMVFAVAATSAGFTGQAIAVAFDRRYGALKRSGASGVPAWAIIAGKIIA  134

Query  126  VVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLA  185
            V A+V LQ I+LG   F LG+R  ++ + L   ++ LG A F ALGL LGG+L AEIVLA
Sbjct  135  VFAMVCLQVIVLGTASFLLGFRAPVSGILLAFVVLLLGVAAFTALGLTLGGSLSAEIVLA  194

Query  186  VANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAV  245
            ++NL+WF+       TL S  +     W+  + PS AL   L +A+  S      + L +
Sbjct  195  LSNLIWFILLAIVGWTLYSQGL-IDVGWL-NLIPSVALASGLVEALAGSFPTIPFLALIL  252

Query  246  WGALAALAALRWFRF  260
            W  +A+ AA +WFRF
Sbjct  253  WAIVASFAASKWFRF  267


>gi|227549234|ref|ZP_03979283.1| ABC superfamily ATP binding cassette transporter, permease protein 
[Corynebacterium lipophiloflavum DSM 44291]
 gi|227078688|gb|EEI16651.1| ABC superfamily ATP binding cassette transporter, permease protein 
[Corynebacterium lipophiloflavum DSM 44291]
Length=257

 Score =  190 bits (483),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 123/252 (49%), Positives = 161/252 (64%), Gaps = 5/252 (1%)

Query  12   GTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPM-GSFGHN  70
            GTF+P PR  +V  M  AQ  +E  L+LR+GEQLLL + IP  +LV    LP+ G+    
Sbjct  8    GTFTPRPRRASVTRMALAQGRIEALLMLRHGEQLLLNLIIPAVILVAAAKLPIPGADSPA  67

Query  71   RAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVV  130
            R    VPV+ A+A  S  FTGQAIA+AFDRRYGALKR GA+ +P W IIAGK L V+A+V
Sbjct  68   RLDHLVPVVFAVAASSAGFTGQAIALAFDRRYGALKRTGASGVPAWTIIAGKILGVLAMV  127

Query  131  FLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVANLM  190
             +Q ++LGAI  ALGWR  +     G   + LG A F ALGLLLGGT+ +E+VLA+ANL+
Sbjct  128  AVQIVVLGAIAVALGWRVPVGGALFGGVTLLLGVACFTALGLLLGGTMSSELVLALANLL  187

Query  191  WFVFAG-FGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGAL  249
            W +  G  G +T   N++   +     + P+ AL  AL+QA+ +SVD    + L VW A+
Sbjct  188  WLILVGILGWVTYSGNLVEAGWY---NLVPTVALAGALTQALHLSVDSGAWIALTVWVAV  244

Query  250  AALAALRWFRFT  261
            A  AA RWFRF 
Sbjct  245  AVTAAARWFRFD  256


>gi|25028246|ref|NP_738300.1| hypothetical protein CE1690 [Corynebacterium efficiens YS-314]
 gi|259507305|ref|ZP_05750205.1| ABC efflux system, permease protein [Corynebacterium efficiens 
YS-314]
 gi|23493530|dbj|BAC18500.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259165109|gb|EEW49663.1| ABC efflux system, permease protein [Corynebacterium efficiens 
YS-314]
Length=262

 Score =  189 bits (479),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 120/260 (47%), Positives = 159/260 (62%), Gaps = 5/260 (1%)

Query  4    TNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLP  63
            TN   FPAGTF+P PR  +   ML AQ  +E  L LR+GEQ LL +F+P+  L+ L    
Sbjct  3    TNESRFPAGTFAPAPRRASPARMLLAQGRVESLLFLRHGEQQLLNLFLPLVGLIALARFD  62

Query  64   M--GSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAG  121
            +  G    + A  F P IMA+A +S+ FTGQAI++AFDRRYGALKR GA+ +P W I+ G
Sbjct  63   LVPGDSDSSLAVAF-PFIMAVASMSSGFTGQAISLAFDRRYGALKRTGASGVPAWTIVFG  121

Query  122  KSLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAE  181
            K +AV+AV  +Q +ILG     LGWR ++T   LG   + +G A F ALGLL+GGTL +E
Sbjct  122  KVIAVLAVTVVQILILGTTALILGWRTSVTGALLGILTLLIGVAAFTALGLLMGGTLSSE  181

Query  182  IVLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIV  241
            +VLA+ANL+W V  G  A  + S  +         V PS AL + +S A    + W  + 
Sbjct  182  LVLALANLIWVVLTGIAAWAVFSPEVNA--DGALSVIPSVALAQGISNAFAGDLPWLQLG  239

Query  242  VLAVWGALAALAALRWFRFT  261
            +L VW A+A  AA RWF FT
Sbjct  240  ILLVWLAVAGFAANRWFSFT  259


>gi|227833036|ref|YP_002834743.1| putative ABC transport system, permease protein [Corynebacterium 
aurimucosum ATCC 700975]
 gi|262182476|ref|ZP_06041897.1| putative ABC transport system, permease protein [Corynebacterium 
aurimucosum ATCC 700975]
 gi|227454052|gb|ACP32805.1| putative ABC transport system, permease protein [Corynebacterium 
aurimucosum ATCC 700975]
Length=253

 Score =  184 bits (468),  Expect = 9e-45, Method: Compositional matrix adjust.
 Identities = 110/252 (44%), Positives = 157/252 (63%), Gaps = 4/252 (1%)

Query  9    FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFG  68
            +  GTFSP P+   V  M  AQ ++E KL+LR+GEQ LL++ IP+ +L+G   L   + G
Sbjct  4    YAPGTFSPHPQRVGVATMARAQGAIESKLMLRHGEQQLLSIIIPLAILIGAAKLK-DTTG  62

Query  69   HNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVA  128
            H     F P+++A+A  S+ FTGQAI++AFDRRYGALKR GA+ +P W I+ GK L V++
Sbjct  63   HGVDEVF-PMVLAVAATSSGFTGQAISLAFDRRYGALKRTGASGVPAWAIVVGKILGVLS  121

Query  129  VVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVAN  188
            +V LQ ++LG +   LG R ++    +G   + LG A F ALGLLLGGT  +E+VLAVAN
Sbjct  122  MVVLQVLVLGTVAAILGLRVSVVGAAIGVLTLVLGVATFTALGLLLGGTFSSEVVLAVAN  181

Query  189  LMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGA  248
            L+WF+  G     + S  +      V  + P+ A+   L  A+  S     ++VL  W A
Sbjct  182  LIWFLLLGAVGWAMFSQGLGD--NGVLTLVPTVAMAAGLDTALNGSFPGIELLVLVGWAA  239

Query  249  LAALAALRWFRF  260
            +A+ AA+RWFRF
Sbjct  240  VASFAAVRWFRF  251


>gi|38233885|ref|NP_939652.1| hypothetical protein DIP1299 [Corynebacterium diphtheriae NCTC 
13129]
 gi|38200146|emb|CAE49827.1| Putative membrane protein [Corynebacterium diphtheriae]
Length=265

 Score =  181 bits (460),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 107/259 (42%), Positives = 157/259 (61%), Gaps = 3/259 (1%)

Query  3    QTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLL  62
            Q+    FPAG F P P   ++  ML +Q  +E KL LR+GEQ+LL+  IP+  +V ++ L
Sbjct  9    QSTVSRFPAGIFEPHPVQASILKMLTSQGRIEAKLFLRHGEQILLSFVIPVISIVAISFL  68

Query  63   PMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGK  122
             +         T +PV++ +A +S+ FTGQAI++AFDRRYGAL+R+GA+ +P W I+ GK
Sbjct  69   HIVDEPTPLLVT-LPVMLTMASLSSGFTGQAISLAFDRRYGALQRVGASGVPSWTIVLGK  127

Query  123  SLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEI  182
             + V+ V  LQ +++  I FALGWR   +A   G  +  LG A F ALGLL+GGTL +E+
Sbjct  128  VIGVLTVSILQVLVISCIAFALGWRVTPSAYFCGMAVFFLGVATFTALGLLMGGTLSSEL  187

Query  183  VLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVV  242
            VL +ANL+WF   G  +  +  N   ++  W++ + PS A+ + +S A    V     V+
Sbjct  188  VLGLANLIWFGLIGIVSFVVFRNGSESS-TWMS-IVPSVAVGKGMSLAFAGIVPIKECVI  245

Query  243  LAVWGALAALAALRWFRFT  261
            L  W  L AL A RWF+F 
Sbjct  246  LLFWLVLGALGATRWFKFN  264


>gi|225021391|ref|ZP_03710583.1| hypothetical protein CORMATOL_01410 [Corynebacterium matruchotii 
ATCC 33806]
 gi|224945773|gb|EEG26982.1| hypothetical protein CORMATOL_01410 [Corynebacterium matruchotii 
ATCC 33806]
Length=252

 Score =  181 bits (459),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 108/252 (43%), Positives = 148/252 (59%), Gaps = 4/252 (1%)

Query  9    FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFG  68
            FPAGTF PDP   +   ML AQ  +E KL LR+GEQLLL+  IP+ +LV +TLLP+    
Sbjct  3    FPAGTFRPDPHRASTRTMLRAQAIIEAKLFLRHGEQLLLSFIIPVCMLVAITLLPVIEQD  62

Query  69   HNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVA  128
                  F P+++A+A +S+ FTG+AI++AFDRRYGALKR GA+ +PV  II GK L +VA
Sbjct  63   DPMRVGF-PIVLAVAAMSSGFTGEAISLAFDRRYGALKRTGASGVPVGIIIVGKILGLVA  121

Query  129  VVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVAN  188
            V  +Q I+L  I   LGW P    +  G  +   G   F +LG+L+GGTL +E+VL  AN
Sbjct  122  VAIIQIIVLTTIALLLGWSPTPEGILTGVLVFLTGITAFTSLGMLMGGTLSSELVLGFAN  181

Query  189  LMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGA  248
            L+W + AG  +  L ++     F  +    PS AL   L  +         ++ LA W  
Sbjct  182  LIWVLLAGGASYLLVNH---DTFPPILTAVPSVALASGLLDSFDGIFPGMALISLAGWTI  238

Query  249  LAALAALRWFRF  260
            +   AA RWF+F
Sbjct  239  IGVTAATRWFKF  250


>gi|317505954|ref|ZP_07963786.1| DrrB family ABC transporter efflux protein [Segniliparus rugosus 
ATCC BAA-974]
 gi|316255730|gb|EFV14968.1| DrrB family ABC transporter efflux protein [Segniliparus rugosus 
ATCC BAA-974]
Length=254

 Score =  180 bits (456),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 140/253 (56%), Positives = 176/253 (70%), Gaps = 2/253 (0%)

Query  8    AFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSF  67
            AFP GTF+PDP+P+     LAAQ   EL L LR+GEQLLL +FIP+ LLVG+ +LP+GS 
Sbjct  3    AFPPGTFAPDPKPSPAVRALAAQTKFELMLFLRHGEQLLLNLFIPVMLLVGIDVLPLGSV  62

Query  68   GHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVV  127
            G        PV+MALAV+S+AFTGQAIAVAFDRRYGALKR  AT +    +IAGK LAVV
Sbjct  63   GWATIDRVAPVVMALAVVSSAFTGQAIAVAFDRRYGALKRYAATSVGRGTLIAGKVLAVV  122

Query  128  AVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVA  187
             VV LQ++++G +   LGWRP+   L +   ++ALGTA FAA GLLLGG ++AEIVLA A
Sbjct  123  VVVALQSVVIGTVAALLGWRPSAEGLLIAVPVLALGTAAFAAGGLLLGGAVKAEIVLAGA  182

Query  188  NLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWG  247
            N++WF+  G   L L S   P    W+ ++ PS AL  ALS A+ + +D F +VVLAVW 
Sbjct  183  NVLWFLMLGVCGLALSSA--PGWHSWLLKIVPSEALASALSAALQLRLDVFCVVVLAVWA  240

Query  248  ALAALAALRWFRF  260
             + A AA RWFRF
Sbjct  241  VVLAWAARRWFRF  253


>gi|334696933|gb|AEG81730.1| putative membrane protein [Corynebacterium ulcerans 809]
Length=266

 Score =  180 bits (456),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 108/254 (43%), Positives = 166/254 (66%), Gaps = 5/254 (1%)

Query  9    FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFG  68
            FP GTF+P+P+  +V  M+ +Q  +E KL LR+GEQ LL+  IP+ +L+ L  LP+    
Sbjct  16   FPPGTFTPNPQRASVARMVWSQGFVEAKLFLRHGEQQLLSFIIPLGMLLALAYLPLLDDP  75

Query  69   HNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVA  128
            +     F P+++ALA +S+ FTGQAI++AFDRRYGAL+R GA+ +P W I++GK L V++
Sbjct  76   NPLTKGF-PMMLALASMSSGFTGQAISLAFDRRYGALQRTGASGVPSWTIVSGKVLGVLS  134

Query  129  VVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVAN  188
            V F+Q ++LGA+  ALGW    T + +G  +  +G A F +LGLL+GGTL +E+VL +AN
Sbjct  135  VSFIQIVLLGAVALALGWTSTATGIVIGLLVFFIGVAAFTSLGLLMGGTLSSELVLGLAN  194

Query  189  LMWFVFAGFGALTL-ESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWG  247
            L+W V  G  +  L +S+  PT   W+ ++ PS AL++ L      S     +++L  W 
Sbjct  195  LIWVVLVGVASYILFQSSAEPTT--WL-KLIPSVALSDGLYSGFRGSFPTTDVIILLGWL  251

Query  248  ALAALAALRWFRFT  261
            +L ++ A RWF+F+
Sbjct  252  SLGSVMANRWFKFS  265


>gi|305681198|ref|ZP_07404005.1| ABC transporter efflux protein, DrrB family [Corynebacterium 
matruchotii ATCC 14266]
 gi|305659403|gb|EFM48903.1| ABC transporter efflux protein, DrrB family [Corynebacterium 
matruchotii ATCC 14266]
Length=252

 Score =  179 bits (455),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 107/252 (43%), Positives = 147/252 (59%), Gaps = 4/252 (1%)

Query  9    FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFG  68
            FPAGTF PDP   +   ML AQ  +E KL LR+GEQLLL+  IP+ +LV +TLLP+    
Sbjct  3    FPAGTFRPDPHRASTRTMLRAQAIIEAKLFLRHGEQLLLSFIIPVCMLVAITLLPVIEQD  62

Query  69   HNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVA  128
                  F P+++A+A +S+ FTG+AI++AFDRRYGALKR GA+ +P   II GK L +VA
Sbjct  63   DPMRVGF-PIVLAVAAMSSGFTGEAISLAFDRRYGALKRTGASGVPAGIIIVGKILGLVA  121

Query  129  VVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVAN  188
            V  +Q I+L  I   LGW P    +  G  +   G   F +LG+L+GGTL +E+VL  AN
Sbjct  122  VAIIQIIVLTTIALLLGWSPTPEGILTGVLVFLTGITAFTSLGMLMGGTLSSELVLGFAN  181

Query  189  LMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGA  248
            L+W + AG  +  L ++     F  +    PS AL   L  +         ++ LA W  
Sbjct  182  LIWVLLAGGASYLLVNH---DTFPPILTAVPSVALASGLLDSFDGIFPGMALISLAGWTI  238

Query  249  LAALAALRWFRF  260
            +   AA RWF+F
Sbjct  239  IGVTAATRWFKF  250


>gi|213965621|ref|ZP_03393815.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Corynebacterium 
amycolatum SK46]
 gi|213951780|gb|EEB63168.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Corynebacterium 
amycolatum SK46]
Length=267

 Score =  177 bits (450),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 112/259 (44%), Positives = 162/259 (63%), Gaps = 1/259 (0%)

Query  3    QTNRPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLL  62
            + +   F  GTF+P P+ + +  ++ +Q  LE KL  R+GEQ+LLT+ IP+ +L+GL ++
Sbjct  6    RADASRFAKGTFAPAPQRSDMAKLVMSQAWLETKLFWRHGEQMLLTIIIPLAMLIGLVMV  65

Query  63   PMGSFGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGK  122
            P+    H     F P+++A++V+S  FTGQAIAV FDRRYGALKR+GA+ +P WGIIAGK
Sbjct  66   PVFELDHPLERIF-PMVLAISVMSAGFTGQAIAVGFDRRYGALKRIGASGVPPWGIIAGK  124

Query  123  SLAVVAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEI  182
             ++V   V LQ I+   +G ALG   ++    L    + LGT  F +LGLL+GGTL AE+
Sbjct  125  IVSVCTTVTLQYILFSLVGLALGAELSIGGWLLAYVGMLLGTFVFTSLGLLMGGTLGAEL  184

Query  183  VLAVANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVV  242
            +L +ANL+WF+  G       +  +      +  + PS ALT+ +S A+ +SV W  + V
Sbjct  185  ILGLANLIWFILIGATTYVAVAPSLDGISSVLLHLLPSVALTDVISAALAMSVHWSAVGV  244

Query  243  LAVWGALAALAALRWFRFT  261
            L VWG L A  A RWFRF 
Sbjct  245  LIVWGVLGAALAARWFRFD  263


>gi|337290818|ref|YP_004629839.1| hypothetical protein CULC22_01210 [Corynebacterium ulcerans BR-AD22]
 gi|334699124|gb|AEG83920.1| putative membrane protein [Corynebacterium ulcerans BR-AD22]
Length=266

 Score =  177 bits (448),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 107/254 (43%), Positives = 164/254 (65%), Gaps = 5/254 (1%)

Query  9    FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFG  68
            FP GTF+P+P+  +V  M+ +Q  +E KL LR+GEQ LL+  IP+ +L+ L  LP+    
Sbjct  16   FPPGTFTPNPQRASVARMVWSQGFVEAKLFLRHGEQQLLSFIIPLGMLLALAYLPLLDDP  75

Query  69   HNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVA  128
            +     F P+++ALA +S+ FTGQAI++AFDRRYGAL+R GA+ +P W I++GK L V++
Sbjct  76   NPLTKGF-PMMLALASMSSGFTGQAISLAFDRRYGALQRTGASGVPSWTIVSGKVLGVLS  134

Query  129  VVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVAN  188
            V F+Q ++LGA+  ALGW    T + +G  +  +G A F +LGLL+GGTL +E+VL +AN
Sbjct  135  VSFIQIVVLGAVALALGWTSTATGIVIGLLVFFIGVAAFTSLGLLMGGTLSSELVLGLAN  194

Query  189  LMWFVFAGFGALTL-ESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWG  247
            L+W V  G  +  L   +  PT   W+ ++ PS AL++ L      S     +++L  W 
Sbjct  195  LIWVVLVGVASYILFRGSAEPTT--WL-KLIPSVALSDGLYSGFRGSFPTTDLIILLGWL  251

Query  248  ALAALAALRWFRFT  261
            +L ++ A RWF+F+
Sbjct  252  SLGSVMANRWFKFS  265


>gi|227503590|ref|ZP_03933639.1| ABC superfamily ATP binding cassette transporter, permease protein 
[Corynebacterium accolens ATCC 49725]
 gi|227075626|gb|EEI13589.1| ABC superfamily ATP binding cassette transporter, permease protein 
[Corynebacterium accolens ATCC 49725]
Length=254

 Score =  177 bits (448),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 108/253 (43%), Positives = 153/253 (61%), Gaps = 4/253 (1%)

Query  9    FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFG  68
            F  GTFSP P+  +   ++ AQ  +E KL+LR+GEQ LL++ IP+ +L+G   L   S G
Sbjct  5    FSPGTFSPAPKRASAGAIIFAQGGMEAKLMLRHGEQQLLSIIIPLAILIGTARLE-SSTG  63

Query  69   HNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVA  128
            H     F P+++A+A  S  FTGQAI++AFDRRYGALKR GA+ +P W II GK + V+ 
Sbjct  64   HGLHEVF-PMVLAVAATSAGFTGQAISLAFDRRYGALKRTGASGVPAWAIIGGKIIGVLT  122

Query  129  VVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVAN  188
            +V  Q ++LGA  FALG R +   + L    +  G A F A+GL+LGGTL +E VLA+AN
Sbjct  123  MVVFQILVLGATAFALGLRISAPGILLMIVSLIFGVAAFTAMGLVLGGTLSSEAVLALAN  182

Query  189  LMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGA  248
            L+WF+        L S  +      +  + P+ AL  AL+ A   +     ++ L  W A
Sbjct  183  LIWFILLAIVGWALYSQGLGD--NGLLNIVPTVALAGALADASNSTFPGIELISLTAWLA  240

Query  249  LAALAALRWFRFT  261
            +A+ AA+RWFRF 
Sbjct  241  VASYAAVRWFRFD  253


>gi|291003575|ref|ZP_06561548.1| putative ABC-2 type transport system permease protein [Saccharopolyspora 
erythraea NRRL 2338]
Length=266

 Score =  176 bits (446),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 114/225 (51%), Positives = 149/225 (67%), Gaps = 0/225 (0%)

Query  7    PAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGS  66
            P FPAGTF P P       MLAA   +E  L+LR+GEQ LLT+ IP+ LL+GL+ L +G+
Sbjct  9    PRFPAGTFRPSPGRGRPGRMLAAHTRIEALLILRHGEQALLTLIIPLALLIGLSTLHIGT  68

Query  67   FGHNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAV  126
                R  + +P I+ALAV+STAFTGQAIA+ FDRRYG +KRL AT LP W +I+G+ LA 
Sbjct  69   VPEPRVDSVMPRILALAVMSTAFTGQAIALGFDRRYGVIKRLSATALPRWVLISGRVLAT  128

Query  127  VAVVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAV  186
            + VV LQA++LG     LGW P+   L     ++ LGT  F A G+L+GGTLRAEIVLA+
Sbjct  129  LVVVALQAVVLGVAAALLGWTPSPVGLLAAVPLLVLGTLAFGAAGVLVGGTLRAEIVLAL  188

Query  187  ANLMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAM  231
            AN +WFV    G L L ++ +P     +A + PSGAL E+L  A+
Sbjct  189  ANAVWFVLLLAGGLALPASDLPGPLSAIAGLLPSGALAESLDAAL  233


>gi|306836148|ref|ZP_07469134.1| ABC superfamily ATP binding cassette transporter, permease protein 
[Corynebacterium accolens ATCC 49726]
 gi|304567998|gb|EFM43577.1| ABC superfamily ATP binding cassette transporter, permease protein 
[Corynebacterium accolens ATCC 49726]
Length=254

 Score =  175 bits (444),  Expect = 6e-42, Method: Compositional matrix adjust.
 Identities = 107/253 (43%), Positives = 152/253 (61%), Gaps = 4/253 (1%)

Query  9    FPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLLLTMFIPITLLVGLTLLPMGSFG  68
            F  GTF P P+  +   ++ AQ  +E KL+LR+GEQ LL++ IP+ +L+G   L   S G
Sbjct  5    FSPGTFRPAPKRASAGAIILAQGGMEAKLMLRHGEQQLLSIIIPLAILIGTARLE-SSTG  63

Query  69   HNRAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVA  128
            H     F P+++A+A  S  FTGQAI++AFDRRYGALKR GA+ +P W II GK + V+ 
Sbjct  64   HGLHEVF-PMVLAVAATSAGFTGQAISLAFDRRYGALKRTGASGVPAWAIIGGKIIGVLT  122

Query  129  VVFLQAIILGAIGFALGWRPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVAN  188
            +V  Q ++LGA  FALG R +   + L    +  G A F A+GL+LGGTL +E VLA+AN
Sbjct  123  MVVFQILVLGATAFALGLRISAPGILLMIVSLIFGVAAFTAMGLVLGGTLSSEAVLALAN  182

Query  189  LMWFVFAGFGALTLESNVIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVVLAVWGA  248
            L+WF+        L S  +      +  + P+ AL  AL+ A   +     ++ L  W A
Sbjct  183  LIWFILLAIVGWALYSQGLGD--NGLLNIVPTVALAGALADASNSTFPGIELISLTAWLA  240

Query  249  LAALAALRWFRFT  261
            +A+ AA+RWFRF 
Sbjct  241  VASYAAVRWFRFD  253



Lambda     K      H
   0.328    0.140    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 388543189928


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40