BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1465 Length=162 Score E Sequences producing significant alignments: (Bits) Value gi|15608603|ref|NP_215981.1| nitrogen fixation related protein [... 333 5e-90 gi|296170675|ref|ZP_06852250.1| SUF system FeS assembly protein ... 280 5e-74 gi|240171380|ref|ZP_04750039.1| putative nitrogen fixation relat... 276 6e-73 gi|254821665|ref|ZP_05226666.1| SUF system FeS assembly protein,... 275 1e-72 gi|15827243|ref|NP_301506.1| hypothetical protein ML0597 [Mycoba... 273 6e-72 gi|41407289|ref|NP_960125.1| hypothetical protein MAP1191 [Mycob... 269 1e-70 gi|183982283|ref|YP_001850574.1| nitrogen fixation related prote... 268 2e-70 gi|254775759|ref|ZP_05217275.1| SUF system FeS assembly protein,... 267 3e-70 gi|118617471|ref|YP_905803.1| nitrogen fixation related protein ... 266 7e-70 gi|333990890|ref|YP_004523504.1| nitrogen fixation-like protein ... 258 2e-67 gi|118470835|ref|YP_887441.1| SUF system FeS assembly protein, N... 254 2e-66 gi|108799407|ref|YP_639604.1| SUF system FeS assembly protein [M... 254 3e-66 gi|342858755|ref|ZP_08715410.1| SUF system FeS assembly protein,... 254 4e-66 gi|126435060|ref|YP_001070751.1| NifU family SUF system FeS asse... 253 8e-66 gi|120403721|ref|YP_953550.1| NifU family SUF system FeS assembl... 250 5e-65 gi|317505961|ref|ZP_07963793.1| NifU family SUF system FeS assem... 248 2e-64 gi|145224257|ref|YP_001134935.1| NifU family SUF system FeS asse... 247 4e-64 gi|111024150|ref|YP_707122.1| Fe-S assembly protein [Rhodococcus... 239 8e-62 gi|296140205|ref|YP_003647448.1| SUF system FeS assembly protein... 239 1e-61 gi|226306546|ref|YP_002766506.1| iron-sulfur cluster assembly pr... 238 2e-61 gi|54025526|ref|YP_119768.1| hypothetical protein nfa35560 [Noca... 238 3e-61 gi|226366397|ref|YP_002784180.1| iron-sulfur cluster assembly pr... 236 6e-61 gi|169629829|ref|YP_001703478.1| SUF system FeS assembly protein... 236 1e-60 gi|296394721|ref|YP_003659605.1| NifU family SUF system FeS asse... 234 2e-60 gi|343924604|ref|ZP_08764152.1| iron-sulfur cluster assembly pro... 233 5e-60 gi|262202314|ref|YP_003273522.1| SUF system FeS assembly protein... 231 3e-59 gi|333919575|ref|YP_004493156.1| putative SUF system FeS assembl... 231 4e-59 gi|312139631|ref|YP_004006967.1| fe-s cluster assembly protein s... 223 6e-57 gi|319947896|ref|ZP_08022081.1| NifU family SUF system FeS assem... 219 1e-55 gi|326382211|ref|ZP_08203903.1| SUF system FeS assembly protein,... 217 5e-55 gi|334696925|gb|AEG81722.1| NifU-like protein involved in Fe-S c... 214 4e-54 gi|337290810|ref|YP_004629831.1| NifU-like protein involved in F... 213 6e-54 gi|302206219|gb|ADL10561.1| NifU [Corynebacterium pseudotubercul... 211 3e-53 gi|227549242|ref|ZP_03979291.1| iron-sulfur (Fe-S) cluster forma... 211 3e-53 gi|300858507|ref|YP_003783490.1| nifU-like protein involved in F... 209 8e-53 gi|19552773|ref|NP_600775.1| NifU-like protein [Corynebacterium ... 207 3e-52 gi|25028238|ref|NP_738292.1| hypothetical protein CE1682 [Coryne... 207 5e-52 gi|213965642|ref|ZP_03393836.1| SUF system FeS assembly protein,... 207 5e-52 gi|227488879|ref|ZP_03919195.1| NifU family protein involved in ... 207 5e-52 gi|38233876|ref|NP_939643.1| putative nitrogen fixation protein ... 206 7e-52 gi|334563120|ref|ZP_08516111.1| NifU-like protein involved in Fe... 206 1e-51 gi|300784739|ref|YP_003765030.1| nitrogen fixation protein NifU ... 204 3e-51 gi|257055647|ref|YP_003133479.1| SUF system FeS assembly protein... 204 5e-51 gi|68536057|ref|YP_250762.1| NifU-like protein involved in Fe-S ... 203 6e-51 gi|256379156|ref|YP_003102816.1| SUF system FeS assembly protein... 203 7e-51 gi|227503598|ref|ZP_03933647.1| iron-sulfur cluster formation pr... 202 1e-50 gi|336325616|ref|YP_004605582.1| NifU-like protein involved in F... 202 1e-50 gi|300781154|ref|ZP_07091008.1| NifU family SUF system FeS assem... 201 2e-50 gi|172040691|ref|YP_001800405.1| NifU-like protein involved in F... 201 4e-50 gi|258652490|ref|YP_003201646.1| SUF system FeS assembly protein... 200 5e-50 >gi|15608603|ref|NP_215981.1| nitrogen fixation related protein [Mycobacterium tuberculosis H37Rv] gi|15840925|ref|NP_335962.1| nitrogen fixation protein NifU-related protein [Mycobacterium tuberculosis CDC1551] gi|31792659|ref|NP_855152.1| nitrogen fixation related protein [Mycobacterium bovis AF2122/97] 80 more sequence titles Length=162 Score = 333 bits (854), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 161/162 (99%), Positives = 162/162 (100%), Gaps = 0/162 (0%) Query 1 VTLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDV 60 +TLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDV Sbjct 1 MTLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDV 60 Query 61 SYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFA 120 SYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFA Sbjct 61 SYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFA 120 Query 121 GVAKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQRTG 162 GVAKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQRTG Sbjct 121 GVAKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQRTG 162 >gi|296170675|ref|ZP_06852250.1| SUF system FeS assembly protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894664|gb|EFG74398.1| SUF system FeS assembly protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=164 Score = 280 bits (716), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 136/164 (83%), Positives = 146/164 (90%), Gaps = 4/164 (2%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQ+YQDVILDHYKHPQHRGLREPFGAQV HVNP+CGDEVTLRVALS+DG RV DVSY Sbjct 1 MRLEQMYQDVILDHYKHPQHRGLREPFGAQVSHVNPVCGDEVTLRVALSDDGQRVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVLT+QVIGQ VP AL V AFT+MVSSRGT+ GDEDVLGDG+AFAGV Sbjct 61 DGQGCSISQAATSVLTQQVIGQTVPEALRTVAAFTDMVSSRGTIEGDEDVLGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASE----AFEEVTDERNQRTG 162 AKYPARVKCALLGWMAFKDALAQA FEE DER++RTG Sbjct 121 AKYPARVKCALLGWMAFKDALAQACSDRGADFEEEKDERDRRTG 164 >gi|240171380|ref|ZP_04750039.1| putative nitrogen fixation related protein [Mycobacterium kansasii ATCC 12478] Length=149 Score = 276 bits (707), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 130/149 (88%), Positives = 141/149 (95%), Gaps = 0/149 (0%) Query 8 IYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSYDGQGC 67 +YQDVILDHYKHPQHRGLREPFGAQVYHVNP+CGDEVTLRVALS+DGT +TDVSYDGQGC Sbjct 1 MYQDVILDHYKHPQHRGLREPFGAQVYHVNPVCGDEVTLRVALSDDGTTITDVSYDGQGC 60 Query 68 SISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGVAKYPA 127 SISQA+TSVLT+QVIG+ VP AL I+DAFTEMVSSRGTV GDEDVLGDG+AFAGVAKYPA Sbjct 61 SISQASTSVLTQQVIGRSVPEALQIIDAFTEMVSSRGTVHGDEDVLGDGIAFAGVAKYPA 120 Query 128 RVKCALLGWMAFKDALAQASEAFEEVTDE 156 RVKCALLGWMA KDALAQAS A EEV++E Sbjct 121 RVKCALLGWMACKDALAQASHALEEVSNE 149 >gi|254821665|ref|ZP_05226666.1| SUF system FeS assembly protein, NifU family protein [Mycobacterium intracellulare ATCC 13950] Length=166 Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 135/165 (82%), Positives = 145/165 (88%), Gaps = 4/165 (2%) Query 1 VTLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDV 60 +TLRLEQ+YQDVILDHYKHPQHRGLREPFGA+V+HVNP+CGDEVTLRVALS+DG V DV Sbjct 1 MTLRLEQMYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVALSDDGETVADV 60 Query 61 SYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFA 120 SYDGQGCSISQAATSVLT+QVIGQ V AL + AFTEMVSSRGT+ GDEDVLGDGVAFA Sbjct 61 SYDGQGCSISQAATSVLTQQVIGQSVGDALKTITAFTEMVSSRGTIEGDEDVLGDGVAFA 120 Query 121 GVAKYPARVKCALLGWMAFKDALAQA----SEAFEEVTDERNQRT 161 GVAKYPARVKCALLGWMA KDALAQA A EEVTDER+ T Sbjct 121 GVAKYPARVKCALLGWMACKDALAQAYSRQEPALEEVTDERDHHT 165 >gi|15827243|ref|NP_301506.1| hypothetical protein ML0597 [Mycobacterium leprae TN] gi|221229721|ref|YP_002503137.1| hypothetical protein MLBr_00597 [Mycobacterium leprae Br4923] gi|466875|gb|AAA17120.1| nifU [Mycobacterium leprae] gi|2398702|emb|CAB16167.1| hypothetical protein MLCL536.24c [Mycobacterium leprae] gi|13092792|emb|CAC30105.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932828|emb|CAR70690.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=165 Score = 273 bits (698), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 130/165 (79%), Positives = 143/165 (87%), Gaps = 3/165 (1%) Query 1 VTLRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDV 60 + LRLEQIYQ+VILDHYKHPQHRGLREPF AQVYHVNPICGDE+TLRVALS++G V D+ Sbjct 1 MILRLEQIYQEVILDHYKHPQHRGLREPFCAQVYHVNPICGDEITLRVALSDNGASVADI 60 Query 61 SYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFA 120 SY+GQGCSISQA+ SVL +QVIGQ VP ALNI+ AFTEMVSSRGT+ GDEDVLGDGVAFA Sbjct 61 SYEGQGCSISQASISVLAQQVIGQSVPDALNIISAFTEMVSSRGTIEGDEDVLGDGVAFA 120 Query 121 GVAKYPARVKCALLGWMAFKDALAQASEA---FEEVTDERNQRTG 162 GVAKYPARVKCALLGWMA KDAL A+ A EEV DE+N R G Sbjct 121 GVAKYPARVKCALLGWMACKDALIHANSADKVLEEVMDEQNHRVG 165 >gi|41407289|ref|NP_960125.1| hypothetical protein MAP1191 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464953|ref|YP_882496.1| SUF system FeS assembly protein, NifU family protein [Mycobacterium avium 104] gi|41395641|gb|AAS03508.1| hypothetical protein MAP_1191 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166240|gb|ABK67137.1| SUF system FeS assembly protein, NifU family protein [Mycobacterium avium 104] gi|336458018|gb|EGO37005.1| SUF system FeS assembly protein, NifU family [Mycobacterium avium subsp. paratuberculosis S397] Length=159 Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 130/160 (82%), Positives = 141/160 (89%), Gaps = 1/160 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQ+YQDVILDHYKHPQHRGLREPFGA+V+HVNP+CGDEVTLRV LS+DG V DVSY Sbjct 1 MRLEQMYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVTLSDDGETVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVLTEQVIG+ V AL+ + AF EMVSSRG V GDEDVLGDG+AFAGV Sbjct 61 DGQGCSISQAATSVLTEQVIGRSVEEALDTIGAFAEMVSSRGAVEGDEDVLGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQRTG 162 AKYPARVKCALLGWMA KDALAQA + EVTDERN R G Sbjct 121 AKYPARVKCALLGWMACKDALAQAY-SRREVTDERNHRAG 159 >gi|183982283|ref|YP_001850574.1| nitrogen fixation related protein [Mycobacterium marinum M] gi|183175609|gb|ACC40719.1| nitrogen fixation related protein [Mycobacterium marinum M] Length=163 Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 130/163 (80%), Positives = 138/163 (85%), Gaps = 9/163 (5%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQ+YQDVILDHYKHPQHRGLREPF QV HVNP+CGDEVTLRV LS DG + DVSY Sbjct 1 MRLEQMYQDVILDHYKHPQHRGLREPFATQVSHVNPVCGDEVTLRVTLSNDGATIADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVLT+QVIGQ VP AL VDAF++MVSSRGTV GDEDVLGDGVAFAGV Sbjct 61 DGQGCSISQAATSVLTQQVIGQTVPEALETVDAFSQMVSSRGTVQGDEDVLGDGVAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQA---------SEAFEEVTDE 156 AKYPARVKCALLGWMAFKDALAQA E EEV+DE Sbjct 121 AKYPARVKCALLGWMAFKDALAQAITANALAEGGEHVEEVSDE 163 >gi|254775759|ref|ZP_05217275.1| SUF system FeS assembly protein, NifU family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=159 Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 129/160 (81%), Positives = 141/160 (89%), Gaps = 1/160 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQ+YQDVILDHYKHPQHRGLREPFGA+V+HVNP+CGDEVTLRV LS+DG V DVSY Sbjct 1 MRLEQMYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVTLSDDGETVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVLTEQVIG+ V AL+ + AF EMVSSRG V GDE+VLGDG+AFAGV Sbjct 61 DGQGCSISQAATSVLTEQVIGRSVEEALDTIGAFAEMVSSRGAVEGDENVLGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQRTG 162 AKYPARVKCALLGWMA KDALAQA + EVTDERN R G Sbjct 121 AKYPARVKCALLGWMACKDALAQAY-SRREVTDERNHRAG 159 >gi|118617471|ref|YP_905803.1| nitrogen fixation related protein [Mycobacterium ulcerans Agy99] gi|118569581|gb|ABL04332.1| nitrogen fixation related protein [Mycobacterium ulcerans Agy99] Length=163 Score = 266 bits (681), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 130/163 (80%), Positives = 138/163 (85%), Gaps = 9/163 (5%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQ+YQDVILDHYKHPQHRGLREPF QV HVNP+CGDEVTLRV LS DG + DVSY Sbjct 1 MRLEQMYQDVILDHYKHPQHRGLREPFATQVSHVNPVCGDEVTLRVTLSNDGATIADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVLT+QVIGQ VP AL VDAF++MVSSRGTV GDEDVLGDGVAFAGV Sbjct 61 DGQGCSISQAATSVLTQQVIGQTVPEALETVDAFSQMVSSRGTVQGDEDVLGDGVAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEA---------FEEVTDE 156 AKYPARVKCALLGWMAFKDALAQA A EEV+DE Sbjct 121 AKYPARVKCALLGWMAFKDALAQAITANALAEGGGHVEEVSDE 163 >gi|333990890|ref|YP_004523504.1| nitrogen fixation-like protein [Mycobacterium sp. JDM601] gi|333486858|gb|AEF36250.1| nitrogen fixation related protein [Mycobacterium sp. JDM601] Length=154 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 122/152 (81%), Positives = 133/152 (88%), Gaps = 0/152 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQ YQ+VILDHYKHPQHRGLREP+GAQV+HVNP CGDE+T+RVA+S+DG R+ DVSY Sbjct 1 MRLEQFYQEVILDHYKHPQHRGLREPYGAQVHHVNPTCGDELTMRVAVSDDGERIADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVL QVIG VP AL DAF EMVSSRGTV GDE+VLGDG+AFAGV Sbjct 61 DGQGCSISQAATSVLASQVIGLSVPEALTTFDAFHEMVSSRGTVEGDEEVLGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEEVT 154 AKYPARVKCALLGWMAFKDALAQA EE T Sbjct 121 AKYPARVKCALLGWMAFKDALAQALAKTEENT 152 >gi|118470835|ref|YP_887441.1| SUF system FeS assembly protein, NifU family protein [Mycobacterium smegmatis str. MC2 155] gi|118172122|gb|ABK73018.1| SUF system FeS assembly protein, NifU family protein [Mycobacterium smegmatis str. MC2 155] Length=164 Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 120/144 (84%), Positives = 131/144 (91%), Gaps = 0/144 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQ+YQ+VILDHYKHP HRGLREPFGA+V+HVNP CGDEVTLRV LS+DG V DVSY Sbjct 1 MRLEQMYQEVILDHYKHPHHRGLREPFGAEVHHVNPTCGDEVTLRVTLSDDGESVEDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVLT+QVIGQ V AL VDAFTEMVSSRGTV GDEDV+GDG+AFAGV Sbjct 61 DGQGCSISQAATSVLTDQVIGQSVGDALKTVDAFTEMVSSRGTVEGDEDVIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQA 146 AKYPARVKCALLGWMAFK A+A+A Sbjct 121 AKYPARVKCALLGWMAFKAAVAEA 144 >gi|108799407|ref|YP_639604.1| SUF system FeS assembly protein [Mycobacterium sp. MCS] gi|119868520|ref|YP_938472.1| NifU family SUF system FeS assembly protein [Mycobacterium sp. KMS] gi|108769826|gb|ABG08548.1| SUF system FeS assembly protein [Mycobacterium sp. MCS] gi|119694609|gb|ABL91682.1| SUF system FeS assembly protein, NifU family [Mycobacterium sp. KMS] Length=153 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 121/150 (81%), Positives = 133/150 (89%), Gaps = 0/150 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQIYQ+VILDHYKHP HRGLREPFGA+V HVNP CGDEVTLRVALS+DG V DVSY Sbjct 1 MRLEQIYQEVILDHYKHPHHRGLREPFGAEVKHVNPTCGDEVTLRVALSDDGDTVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVLT+ VIG+ V AL V AFTEMVSSRGT+ GDEDV+GDG+AFAGV Sbjct 61 DGQGCSISQASTSVLTDLVIGESVGDALKTVAAFTEMVSSRGTIEGDEDVIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEE 152 +KYPARVKCALLGWMAFKDA+AQAS EE Sbjct 121 SKYPARVKCALLGWMAFKDAVAQASHDSEE 150 >gi|342858755|ref|ZP_08715410.1| SUF system FeS assembly protein, NifU family protein [Mycobacterium colombiense CECT 3035] gi|342134459|gb|EGT87639.1| SUF system FeS assembly protein, NifU family protein [Mycobacterium colombiense CECT 3035] Length=152 Score = 254 bits (648), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 120/139 (87%), Positives = 128/139 (93%), Gaps = 0/139 (0%) Query 8 IYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSYDGQGC 67 +YQDVILDHYKHPQHRGLREPFGA+V+HVNP+CGDEVTLRVALSEDG V DVSYDGQGC Sbjct 1 MYQDVILDHYKHPQHRGLREPFGAEVFHVNPVCGDEVTLRVALSEDGETVADVSYDGQGC 60 Query 68 SISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGVAKYPA 127 SISQAATSVLTEQVIG V AL V AFTEMVSSRGT+ GDED+LGDG+AFAGVAKYPA Sbjct 61 SISQAATSVLTEQVIGHSVGDALKTVTAFTEMVSSRGTIEGDEDLLGDGIAFAGVAKYPA 120 Query 128 RVKCALLGWMAFKDALAQA 146 RVKCALLGWMAFKDALA+A Sbjct 121 RVKCALLGWMAFKDALAKA 139 >gi|126435060|ref|YP_001070751.1| NifU family SUF system FeS assembly protein [Mycobacterium sp. JLS] gi|126234860|gb|ABN98260.1| SUF system FeS assembly protein, NifU family [Mycobacterium sp. JLS] Length=153 Score = 253 bits (645), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 120/150 (80%), Positives = 133/150 (89%), Gaps = 0/150 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQIYQ+VILDHYKHP HRGLREPFGA+V HVNP CGDEVTLRVALS+DG V DVSY Sbjct 1 MRLEQIYQEVILDHYKHPHHRGLREPFGAEVKHVNPTCGDEVTLRVALSDDGDTVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVLT+ VIG+ V AL V AFTEMVSSRGT+ GDEDV+GDG+AFAGV Sbjct 61 DGQGCSISQASTSVLTDLVIGESVGDALKTVAAFTEMVSSRGTIEGDEDVIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEE 152 +KYPARVKCALLGWMAFKDA+AQAS +E Sbjct 121 SKYPARVKCALLGWMAFKDAVAQASHDSQE 150 >gi|120403721|ref|YP_953550.1| NifU family SUF system FeS assembly protein [Mycobacterium vanbaalenii PYR-1] gi|119956539|gb|ABM13544.1| SUF system FeS assembly protein, NifU family [Mycobacterium vanbaalenii PYR-1] Length=153 Score = 250 bits (638), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 119/144 (83%), Positives = 128/144 (89%), Gaps = 0/144 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQIYQ+VILDHYKHP HRGLREPF A+V+HVNP CGDEVTLRV LSEDG VTD+SY Sbjct 1 MRLEQIYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVTLSEDGETVTDISY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVLT+QVIGQ V AL V AF+EMVSSRG V GDEDVLGDG+AFAGV Sbjct 61 DGQGCSISQAATSVLTDQVIGQSVGDALKTVAAFSEMVSSRGKVDGDEDVLGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQA 146 +KYPARVKCALLGW AFK ALAQA Sbjct 121 SKYPARVKCALLGWTAFKAALAQA 144 >gi|317505961|ref|ZP_07963793.1| NifU family SUF system FeS assembly protein [Segniliparus rugosus ATCC BAA-974] gi|316255737|gb|EFV14975.1| NifU family SUF system FeS assembly protein [Segniliparus rugosus ATCC BAA-974] Length=154 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 115/150 (77%), Positives = 133/150 (89%), Gaps = 0/150 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RL+Q+YQ+VILDHYKHP HRGLREP+G++V+HVNP CGDE+TLRVA+S DG RV DVSY Sbjct 1 MRLDQMYQEVILDHYKHPHHRGLREPYGSEVHHVNPTCGDEITLRVAVSADGERVEDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVL +QVIGQ V AL V AF EM+SSRG + GDED++GDGVAFAGV Sbjct 61 DGQGCSISQAATSVLADQVIGQSVGDALKSVAAFNEMISSRGEIEGDEDLIGDGVAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEE 152 AKYPARVKCALLGWMAFKDALAQA E+ ++ Sbjct 121 AKYPARVKCALLGWMAFKDALAQAVESTDK 150 >gi|145224257|ref|YP_001134935.1| NifU family SUF system FeS assembly protein [Mycobacterium gilvum PYR-GCK] gi|315444592|ref|YP_004077471.1| SUF system FeS assembly protein, NifU family [Mycobacterium sp. Spyr1] gi|145216743|gb|ABP46147.1| SUF system FeS assembly protein, NifU family [Mycobacterium gilvum PYR-GCK] gi|315262895|gb|ADT99636.1| SUF system FeS assembly protein, NifU family [Mycobacterium sp. Spyr1] Length=155 Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 116/144 (81%), Positives = 129/144 (90%), Gaps = 0/144 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQIYQ+VILDHYKHP HRGLREPF A+V+HVNP CGDEVTLRVA+S+DG VTD+SY Sbjct 1 MRLEQIYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVAVSDDGETVTDISY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVLT+QVIGQ V AL V AFTEMVSSRG + GDEDVLGDG+AFAGV Sbjct 61 DGQGCSISQASTSVLTDQVIGQTVGDALKTVAAFTEMVSSRGKIDGDEDVLGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQA 146 +KYPARVKCALLGW AFK ALA+A Sbjct 121 SKYPARVKCALLGWTAFKAALAEA 144 >gi|111024150|ref|YP_707122.1| Fe-S assembly protein [Rhodococcus jostii RHA1] gi|110823680|gb|ABG98964.1| probable Fe-S assembly protein [Rhodococcus jostii RHA1] Length=171 Score = 239 bits (611), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 116/156 (75%), Positives = 134/156 (86%), Gaps = 3/156 (1%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +R+EQ+YQ+VILDHYKHP RGLREPFGA+V+HVNP CGDEVTLRV L++DGT V DVSY Sbjct 1 MRMEQMYQEVILDHYKHPHGRGLREPFGAEVHHVNPTCGDEVTLRVQLADDGT-VVDVSY 59 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVLT+QV+G V +AL V AF EMVSSRGTV GDEDVLGDG+AF GV Sbjct 60 DGQGCSISQASTSVLTDQVVGMPVEQALQTVTAFNEMVSSRGTVEGDEDVLGDGIAFVGV 119 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEEVTDERN 158 +KYPARVKCALLGWMAFKDA+ Q + + V DER+ Sbjct 120 SKYPARVKCALLGWMAFKDAVVQIVD--DRVVDERD 153 >gi|296140205|ref|YP_003647448.1| SUF system FeS assembly protein, NifU family [Tsukamurella paurometabola DSM 20162] gi|296028339|gb|ADG79109.1| SUF system FeS assembly protein, NifU family [Tsukamurella paurometabola DSM 20162] Length=151 Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 109/143 (77%), Positives = 125/143 (88%), Gaps = 0/143 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +R+EQ+YQDVILDHYKHP HRGLREPF A+V+HVNP CGDEVTLRV LS+D V DVSY Sbjct 1 MRMEQMYQDVILDHYKHPHHRGLREPFEAEVHHVNPTCGDEVTLRVHLSDDQETVVDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVLT+QVIGQ V AL +V ++TEM+ SRG + GDEDV+GDG+AF GV Sbjct 61 DGQGCSISQASTSVLTDQVIGQSVGEALKMVQSYTEMLQSRGQIEGDEDVIGDGIAFVGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQ 145 +KYPARVKCALLGWMAFKDA AQ Sbjct 121 SKYPARVKCALLGWMAFKDATAQ 143 >gi|226306546|ref|YP_002766506.1| iron-sulfur cluster assembly protein IscU [Rhodococcus erythropolis PR4] gi|229493558|ref|ZP_04387343.1| SUF system FeS assembly protein, NifU family [Rhodococcus erythropolis SK121] gi|226185663|dbj|BAH33767.1| putative iron-sulfur cluster assembly protein IscU [Rhodococcus erythropolis PR4] gi|229319519|gb|EEN85355.1| SUF system FeS assembly protein, NifU family [Rhodococcus erythropolis SK121] Length=167 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/143 (79%), Positives = 126/143 (89%), Gaps = 1/143 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +R+EQ+YQ+VILDHYKHP RGLREPFGA+V+HVNP CGDEVTLRV +SEDGT V+DVSY Sbjct 1 MRMEQMYQEVILDHYKHPHGRGLREPFGAEVHHVNPTCGDEVTLRVQISEDGT-VSDVSY 59 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVL + VIG +V AL V AF EMVSSRGTV GDEDVLGDG+AF GV Sbjct 60 DGQGCSISQASTSVLNDLVIGMQVTDALKTVTAFNEMVSSRGTVEGDEDVLGDGIAFVGV 119 Query 123 AKYPARVKCALLGWMAFKDALAQ 145 +KYPARVKCALLGWMAFKDA+ Q Sbjct 120 SKYPARVKCALLGWMAFKDAVVQ 142 >gi|54025526|ref|YP_119768.1| hypothetical protein nfa35560 [Nocardia farcinica IFM 10152] gi|54017034|dbj|BAD58404.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=160 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 111/149 (75%), Positives = 131/149 (88%), Gaps = 1/149 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +R+EQ+YQ+VILDHYKHP HRGLREPFGA+V+HVNP CGDEVTLRV L+E+G V DVSY Sbjct 1 MRMEQMYQEVILDHYKHPHHRGLREPFGAEVHHVNPTCGDEVTLRVQLAENGD-VADVSY 59 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATS+LT+QVIG V +AL +VDA+ EM+SSRGTV GDED+LGDG+A AGV Sbjct 60 DGQGCSISQAATSILTDQVIGLPVQQALKVVDAYNEMISSRGTVAGDEDLLGDGIALAGV 119 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFE 151 +KYPARVKCALLGW+AFKDA+ + S E Sbjct 120 SKYPARVKCALLGWLAFKDAVIRISSDRE 148 >gi|226366397|ref|YP_002784180.1| iron-sulfur cluster assembly protein IscU [Rhodococcus opacus B4] gi|226244887|dbj|BAH55235.1| putative iron-sulfur cluster assembly protein IscU [Rhodococcus opacus B4] Length=166 Score = 236 bits (603), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 112/143 (79%), Positives = 127/143 (89%), Gaps = 1/143 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +R+EQ+YQ+VILDHYKHP RGLREPFGA+V+HVNP CGDEVTLRV L++DGT V DVSY Sbjct 1 MRMEQMYQEVILDHYKHPHGRGLREPFGAEVHHVNPTCGDEVTLRVQLADDGT-VVDVSY 59 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVLT+QV+G V +AL V AF EMVSSRGTV GDEDVLGDG+AF GV Sbjct 60 DGQGCSISQASTSVLTDQVVGMPVEQALQTVAAFNEMVSSRGTVEGDEDVLGDGIAFVGV 119 Query 123 AKYPARVKCALLGWMAFKDALAQ 145 +KYPARVKCALLGWMAFKDA+ Q Sbjct 120 SKYPARVKCALLGWMAFKDAVVQ 142 >gi|169629829|ref|YP_001703478.1| SUF system FeS assembly protein [Mycobacterium abscessus ATCC 19977] gi|169241796|emb|CAM62824.1| Possible SUF system FeS assembly protein [Mycobacterium abscessus] Length=150 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 110/149 (74%), Positives = 128/149 (86%), Gaps = 2/149 (1%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQ+YQ+VILDHYKHP HRGLREPF A+V+HVNP CGDEVTLRV + ++ ++ DVSY Sbjct 1 MRLEQMYQEVILDHYKHPHHRGLREPFAAEVHHVNPTCGDEVTLRVFVQDN--KIADVSY 58 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVLT+QVIG V AL V +F EM+SSRGT+ GDEDV+GDG+AFAGV Sbjct 59 DGQGCSISQAATSVLTDQVIGLTVDEALKTVASFNEMISSRGTIDGDEDVIGDGIAFAGV 118 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFE 151 ++YPARVKCALLGWMAFKDAL QA E E Sbjct 119 SRYPARVKCALLGWMAFKDALVQAIEHHE 147 >gi|296394721|ref|YP_003659605.1| NifU family SUF system FeS assembly protein [Segniliparus rotundus DSM 44985] gi|296181868|gb|ADG98774.1| SUF system FeS assembly protein, NifU family [Segniliparus rotundus DSM 44985] Length=151 Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 109/138 (79%), Positives = 124/138 (90%), Gaps = 0/138 (0%) Query 8 IYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSYDGQGC 67 +YQ+VILDHYKHP HRGLREP+GA+V+HVNP CGDEVTLRVA+S DG RV DVSYDGQGC Sbjct 1 MYQEVILDHYKHPHHRGLREPYGAEVHHVNPTCGDEVTLRVAVSPDGQRVEDVSYDGQGC 60 Query 68 SISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGVAKYPA 127 SISQAATSVL +QVIG+ V AL V AF+EM+SSRG + GDED++GDG+AFAGV+KYPA Sbjct 61 SISQAATSVLADQVIGRTVGDALKSVAAFSEMISSRGELEGDEDLIGDGIAFAGVSKYPA 120 Query 128 RVKCALLGWMAFKDALAQ 145 RVKCALLGWMAFKDALAQ Sbjct 121 RVKCALLGWMAFKDALAQ 138 >gi|343924604|ref|ZP_08764152.1| iron-sulfur cluster assembly protein IscU [Gordonia alkanivorans NBRC 16433] gi|343765539|dbj|GAA11078.1| iron-sulfur cluster assembly protein IscU [Gordonia alkanivorans NBRC 16433] Length=160 Score = 233 bits (595), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 105/159 (67%), Positives = 131/159 (83%), Gaps = 0/159 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +R+EQ+YQ+VILDHYKHP RGLREPFG +V+HVNP CGDEVTLRVA+S DGT + DVSY Sbjct 1 MRMEQMYQEVILDHYKHPHGRGLREPFGTEVHHVNPTCGDEVTLRVAVSADGTTIDDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVL + ++GQ V AL V++F M++SRG PGDEDV+GDG+AF GV Sbjct 61 DGQGCSISQASTSVLYDLIVGQSVGEALATVESFNAMMTSRGKDPGDEDVIGDGIAFTGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQRT 161 +KYPARVKCALLGWMAFKDAL+Q ++ + + E+ + Sbjct 121 SKYPARVKCALLGWMAFKDALSQTVDSHDTDSHEKEAES 159 >gi|262202314|ref|YP_003273522.1| SUF system FeS assembly protein, NifU family [Gordonia bronchialis DSM 43247] gi|262085661|gb|ACY21629.1| SUF system FeS assembly protein, NifU family [Gordonia bronchialis DSM 43247] Length=154 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 104/143 (73%), Positives = 124/143 (87%), Gaps = 0/143 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +R+EQ+YQDVILDHYKHP RGLREPFGA+V+HVNP CGDEVTLRVA+S+DG VTD+SY Sbjct 1 MRMEQMYQDVILDHYKHPHGRGLREPFGAEVHHVNPTCGDEVTLRVAVSDDGQTVTDISY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVL +Q++G V A+ + AF M++SRG GDE++LGDG+A AGV Sbjct 61 DGQGCSISQASTSVLHDQLVGASVDHAMATLTAFNAMMTSRGKDEGDEEILGDGIALAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQ 145 +KYPARVKCALLGWMAFKDALAQ Sbjct 121 SKYPARVKCALLGWMAFKDALAQ 143 >gi|333919575|ref|YP_004493156.1| putative SUF system FeS assembly protein [Amycolicicoccus subflavus DQS3-9A1] gi|333481796|gb|AEF40356.1| Possible SUF system FeS assembly protein [Amycolicicoccus subflavus DQS3-9A1] Length=152 Score = 231 bits (588), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 107/147 (73%), Positives = 126/147 (86%), Gaps = 2/147 (1%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RL+Q+YQ+VILDHYKHP HRGLREPFGA+V+HVNP CGDE+TLRV + D V D+SY Sbjct 1 MRLDQMYQEVILDHYKHPHHRGLREPFGAEVHHVNPTCGDEITLRVHVERDA--VADISY 58 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSVLT+Q+IG + AL IV AF EM+ SRGT+ GDED+LGDG+AFAGV Sbjct 59 DGQGCSISQASTSVLTDQLIGLPLGDALKIVGAFQEMIGSRGTIEGDEDLLGDGIAFAGV 118 Query 123 AKYPARVKCALLGWMAFKDALAQASEA 149 AKYPARVKCALLGWMAFKDA+ Q +E Sbjct 119 AKYPARVKCALLGWMAFKDAVVQITEG 145 >gi|312139631|ref|YP_004006967.1| fe-s cluster assembly protein sufu [Rhodococcus equi 103S] gi|325676693|ref|ZP_08156367.1| SUF system FeS assembly protein [Rhodococcus equi ATCC 33707] gi|311888970|emb|CBH48283.1| Fe-S cluster assembly protein SufU [Rhodococcus equi 103S] gi|325552475|gb|EGD22163.1| SUF system FeS assembly protein [Rhodococcus equi ATCC 33707] Length=162 Score = 223 bits (569), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 111/165 (68%), Positives = 132/165 (80%), Gaps = 12/165 (7%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSE--DGTRVT-D 59 +RLEQ+YQ+VILDHYKHP RGLR+PFGA+V+HVNP CGDE+TLR L+E DG V D Sbjct 1 MRLEQMYQEVILDHYKHPHGRGLRDPFGAEVHHVNPTCGDEITLRAHLTEGEDGRPVVAD 60 Query 60 VSYDGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAF 119 +SYDGQGCSISQA+TSVL +Q++G + AL VDAF EMVSSRGTV GDEDVLGDG+AF Sbjct 61 ISYDGQGCSISQASTSVLFDQIVGMPLDEALRTVDAFNEMVSSRGTVEGDEDVLGDGIAF 120 Query 120 AGVAKYPARVKCALLGWMAFKDALAQASEAFEEVTDERNQ--RTG 162 +GV+KYPARVKCALLGWMAFKDA+ + + D+ N RTG Sbjct 121 SGVSKYPARVKCALLGWMAFKDAVVR-------IVDDENDLARTG 158 >gi|319947896|ref|ZP_08022081.1| NifU family SUF system FeS assembly protein [Dietzia cinnamea P4] gi|319438439|gb|EFV93374.1| NifU family SUF system FeS assembly protein [Dietzia cinnamea P4] Length=150 Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 98/150 (66%), Positives = 124/150 (83%), Gaps = 0/150 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 ++LEQ+YQ+VILDHY+HP H GLREPFGA+V+HVNP CGDE+TLR+ LSED V DVSY Sbjct 1 MKLEQMYQEVILDHYRHPHHSGLREPFGAEVHHVNPTCGDELTLRLRLSEDLATVEDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D QGCSISQA+TS++ + ++G+RV +L +VDAF M+SSRG GDE+VL D VA AGV Sbjct 61 DAQGCSISQASTSMMADLLVGRRVEESLEVVDAFQAMISSRGQDEGDEEVLDDAVALAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEE 152 ++YPARVKCALLGWMAFKDA+ + +E +E Sbjct 121 SRYPARVKCALLGWMAFKDAVGRQTEHHQE 150 >gi|326382211|ref|ZP_08203903.1| SUF system FeS assembly protein, NifU family [Gordonia neofelifaecis NRRL B-59395] gi|326198941|gb|EGD56123.1| SUF system FeS assembly protein, NifU family [Gordonia neofelifaecis NRRL B-59395] Length=149 Score = 217 bits (552), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 99/142 (70%), Positives = 123/142 (87%), Gaps = 2/142 (1%) Query 5 LEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSYDG 64 +EQ+YQ+VILDHYKHP RGLR+PF A+V+HVNP CGDEVTLRVA+S+D + D+SYDG Sbjct 1 MEQMYQEVILDHYKHPHGRGLRDPFDAEVHHVNPTCGDEVTLRVAVSDD--TIADISYDG 58 Query 65 QGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGVAK 124 QGCSISQA+TSVL +QV+G V AL+ +D+F M++SRG GDED++GDG+AFAGV+K Sbjct 59 QGCSISQASTSVLFDQVVGLSVDDALSTLDSFAAMMTSRGADAGDEDLIGDGIAFAGVSK 118 Query 125 YPARVKCALLGWMAFKDALAQA 146 YPARVKCALLGWMAFKDAL+Q+ Sbjct 119 YPARVKCALLGWMAFKDALSQS 140 >gi|334696925|gb|AEG81722.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium ulcerans 809] Length=149 Score = 214 bits (544), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 94/146 (65%), Positives = 121/146 (83%), Gaps = 0/146 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LE +YQ+VILDHYK+P H GLREP+ ++V+HVNP CGDE+TLRV LSEDG V DVSY Sbjct 1 MNLESMYQEVILDHYKNPMHAGLREPYESEVHHVNPSCGDEITLRVHLSEDGLTVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D +GCSISQA+TSV+ E+++G+ V A++ ++ F M++SRGTV GDED++GDG+AFAGV Sbjct 61 DAEGCSISQASTSVMAEEIVGKSVAEAMDKLEEFERMITSRGTVEGDEDLIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASE 148 +KYPARVKCALLGW AF+ A A A E Sbjct 121 SKYPARVKCALLGWKAFQAATADALE 146 >gi|337290810|ref|YP_004629831.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium ulcerans BR-AD22] gi|334699116|gb|AEG83912.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium ulcerans BR-AD22] Length=149 Score = 213 bits (543), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 93/146 (64%), Positives = 121/146 (83%), Gaps = 0/146 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LE +YQ+VILDHYK+P H GLREP+ ++V+HVNP CGDE+TLRV LSEDG V DVSY Sbjct 1 MNLESMYQEVILDHYKNPMHAGLREPYESEVHHVNPSCGDEITLRVHLSEDGLTVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D +GCSISQA+TSV+ E+++G+ V A++ ++ F M++SRGT+ GDED++GDG+AFAGV Sbjct 61 DAEGCSISQASTSVMAEEIVGKSVAEAMDKLEEFERMITSRGTIEGDEDLIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASE 148 +KYPARVKCALLGW AF+ A A A E Sbjct 121 SKYPARVKCALLGWKAFQAATADALE 146 >gi|302206219|gb|ADL10561.1| NifU [Corynebacterium pseudotuberculosis C231] gi|308276461|gb|ADO26360.1| IscU like and NifU like protein [Corynebacterium pseudotuberculosis I19] gi|341824901|gb|AEK92422.1| NifU [Corynebacterium pseudotuberculosis PAT10] Length=149 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 93/146 (64%), Positives = 120/146 (83%), Gaps = 0/146 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LE +YQ+VILDH+K+P H GLREP+ ++V+HVNP CGDE+TLRV LSEDG V DVSY Sbjct 1 MNLESMYQEVILDHHKNPMHAGLREPYESEVHHVNPSCGDEITLRVHLSEDGLTVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D +GCSISQA+TSV+ E+++G+ V A+ ++ F M++SRGTV GDED++GDG+AFAGV Sbjct 61 DAEGCSISQASTSVMAEEIVGKTVAEAMEKLEEFERMITSRGTVEGDEDLIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASE 148 +KYPARVKCALLGW AF+ A A A E Sbjct 121 SKYPARVKCALLGWKAFQAATADALE 146 >gi|227549242|ref|ZP_03979291.1| iron-sulfur (Fe-S) cluster formation protein IscU [Corynebacterium lipophiloflavum DSM 44291] gi|227078696|gb|EEI16659.1| iron-sulfur (Fe-S) cluster formation protein IscU [Corynebacterium lipophiloflavum DSM 44291] Length=150 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/150 (66%), Positives = 122/150 (82%), Gaps = 3/150 (2%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LE +YQ+VILDHYK+PQH GLR+PF A+V+HVNP CGDE+TLRVALS+DG V+DVSY Sbjct 1 MNLEAMYQEVILDHYKNPQHAGLRDPFDAEVHHVNPSCGDEITLRVALSKDGATVSDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D GCSISQA+TSV+ E++IG V A+ + AF EMV+SRGT+ GD +V+GDGVAF GV Sbjct 61 DAAGCSISQASTSVMAEEIIGLGVDEAMAKLSAFEEMVTSRGTLEGDPEVIGDGVAFGGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEE 152 AK+PARVKCALLGW AF+ A S+A EE Sbjct 121 AKFPARVKCALLGWKAFQ---AATSDALEE 147 >gi|300858507|ref|YP_003783490.1| nifU-like protein involved in Fe-S cluster formation [Corynebacterium pseudotuberculosis FRC41] gi|300685961|gb|ADK28883.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium pseudotuberculosis FRC41] gi|302330777|gb|ADL20971.1| NifU [Corynebacterium pseudotuberculosis 1002] Length=149 Score = 209 bits (533), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 92/146 (64%), Positives = 120/146 (83%), Gaps = 0/146 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LE +YQ+VILDH+K+P H GLREP+ ++V+HVNP CGDE+TLRV LSEDG V DVSY Sbjct 1 MNLESMYQEVILDHHKNPMHAGLREPYESEVHHVNPSCGDEITLRVHLSEDGLTVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D +GCSISQA+TSV+ E+++G+ V A+ ++ F M++SRGTV G+ED++GDG+AFAGV Sbjct 61 DAEGCSISQASTSVMAEEIVGKTVAEAMEKLEEFERMITSRGTVEGEEDLIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASE 148 +KYPARVKCALLGW AF+ A A A E Sbjct 121 SKYPARVKCALLGWKAFQAATADALE 146 >gi|19552773|ref|NP_600775.1| NifU-like protein [Corynebacterium glutamicum ATCC 13032] gi|62390443|ref|YP_225845.1| NifU homologs involved in Fe-S cluster formation [Corynebacterium glutamicum ATCC 13032] gi|145295684|ref|YP_001138505.1| hypothetical protein cgR_1611 [Corynebacterium glutamicum R] gi|21324328|dbj|BAB98953.1| NifU homologs involved in Fe-S cluster formation [Corynebacterium glutamicum ATCC 13032] gi|41325780|emb|CAF21569.1| NifU homologs involved in Fe-S cluster formation [Corynebacterium glutamicum ATCC 13032] gi|140845604|dbj|BAF54603.1| hypothetical protein [Corynebacterium glutamicum R] gi|344044990|gb|EGV40664.1| hypothetical protein CgS9114_06690 [Corynebacterium glutamicum S9114] Length=149 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 93/138 (68%), Positives = 117/138 (85%), Gaps = 0/138 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LEQ+YQ+VILDHYK+PQH+GLR+PF A+V+HVNP CGDE+TLRV LSEDG+ V DVSY Sbjct 1 MNLEQMYQEVILDHYKNPQHKGLRDPFDAEVHHVNPSCGDELTLRVKLSEDGSTVEDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 + GCSISQA+TSV+ E+++GQ V +AL + F +M+ SRG GDED++GDGVAF+GV Sbjct 61 EAVGCSISQASTSVMAEEIVGQPVDKALEKLTEFEKMIVSRGQFVGDEDLIGDGVAFSGV 120 Query 123 AKYPARVKCALLGWMAFK 140 AKYPARVKCALLGW AF+ Sbjct 121 AKYPARVKCALLGWKAFQ 138 >gi|25028238|ref|NP_738292.1| hypothetical protein CE1682 [Corynebacterium efficiens YS-314] gi|259507297|ref|ZP_05750197.1| SUF system FeS assembly protein [Corynebacterium efficiens YS-314] gi|23493522|dbj|BAC18492.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165101|gb|EEW49655.1| SUF system FeS assembly protein [Corynebacterium efficiens YS-314] Length=148 Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 94/146 (65%), Positives = 120/146 (83%), Gaps = 0/146 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +RLEQ+YQ+VILDHYK+PQH+GLR+PF ++V+HVNP CGDE+TLRV LS DG V DVSY Sbjct 1 MRLEQMYQEVILDHYKNPQHKGLRDPFDSEVHHVNPSCGDELTLRVRLSADGETVEDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 + GCSISQA+TSV+ E+++G+ V A+ + F +M+ SRG GDED++GDGVAF+GV Sbjct 61 EAVGCSISQASTSVMAEEIVGRPVAEAMVKLQEFEKMIVSRGQEEGDEDIIGDGVAFSGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASE 148 AKYPARVKCALLGW AF+ A A+A E Sbjct 121 AKYPARVKCALLGWKAFQAATAEALE 146 >gi|213965642|ref|ZP_03393836.1| SUF system FeS assembly protein, NifU family [Corynebacterium amycolatum SK46] gi|213951801|gb|EEB63189.1| SUF system FeS assembly protein, NifU family [Corynebacterium amycolatum SK46] Length=171 Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 91/138 (66%), Positives = 115/138 (84%), Gaps = 0/138 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 ++LEQ+YQ+VILDHYKHPQH GLREPF +V+HVNP CGDE+TLRV L++D T V DVSY Sbjct 1 MKLEQMYQEVILDHYKHPQHAGLREPFNTEVHHVNPSCGDELTLRVTLNDDLTVVNDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D GCSISQA+TSV+ E+++G+ V A+ + F MV+SRG + GDED++GDG+AFAGV Sbjct 61 DAVGCSISQASTSVMAEEIVGKTVDEAMAKLAEFERMVTSRGKIEGDEDLIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFK 140 +KYPARVKCALLGW AF+ Sbjct 121 SKYPARVKCALLGWKAFQ 138 >gi|227488879|ref|ZP_03919195.1| NifU family protein involved in Fe-S cluster formation [Corynebacterium glucuronolyticum ATCC 51867] gi|227542125|ref|ZP_03972174.1| NifU family protein involved in Fe-S cluster formation [Corynebacterium glucuronolyticum ATCC 51866] gi|227091301|gb|EEI26613.1| NifU family protein involved in Fe-S cluster formation [Corynebacterium glucuronolyticum ATCC 51867] gi|227181954|gb|EEI62926.1| NifU family protein involved in Fe-S cluster formation [Corynebacterium glucuronolyticum ATCC 51866] Length=144 Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 97/143 (68%), Positives = 117/143 (82%), Gaps = 0/143 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 ++LEQ+YQ+VILDHYKHPQH GLREPF A+V+HVN CGDE+TLRV LSED V DVSY Sbjct 1 MQLEQMYQEVILDHYKHPQHAGLREPFDAEVHHVNTSCGDELTLRVKLSEDKKTVEDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D +GCSISQAA VLTE+VIGQ + AL + F +MV+SRG GDED++GDGVAFAGV Sbjct 61 DAEGCSISQAAVDVLTEEVIGQPLDTALAKLAEFEKMVTSRGEHEGDEDLIGDGVAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQ 145 ++YPARVKCALLGW AF+ A+ + Sbjct 121 SRYPARVKCALLGWKAFEAAVGE 143 >gi|38233876|ref|NP_939643.1| putative nitrogen fixation protein NifU-like protein [Corynebacterium diphtheriae NCTC 13129] gi|38200137|emb|CAE49818.1| Putative nitrogen fixation protein NifU-related protein [Corynebacterium diphtheriae] Length=149 Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 93/146 (64%), Positives = 119/146 (82%), Gaps = 0/146 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LE +YQ+VILDHYK+P H GLRE + A+V+HVNP CGDE+TLRV LSEDG V DVSY Sbjct 1 MNLESMYQEVILDHYKNPLHAGLRESYDAEVHHVNPSCGDEITLRVHLSEDGLTVQDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D +GCSISQA+TSV+ E+++GQ V +AL + F +M++SRG GDED++GDG+AFAGV Sbjct 61 DAEGCSISQASTSVMAEEIVGQPVDKALEKLAEFEKMITSRGKEEGDEDLIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASE 148 +KYPARVKCALLGW AF+ A ++A E Sbjct 121 SKYPARVKCALLGWKAFQAATSEALE 146 >gi|334563120|ref|ZP_08516111.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium bovis DSM 20582] Length=184 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 99/153 (65%), Positives = 117/153 (77%), Gaps = 0/153 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 ++LEQ+YQ+VILDHYKHPQH GLREPF A+V+HVN CGDE+TLRV LSEDG V DVSY Sbjct 1 MKLEQMYQEVILDHYKHPQHAGLREPFEAEVHHVNTSCGDELTLRVHLSEDGRTVEDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D GCSISQA+TSV+ E+++G V A + F MV+SRG+V GD DV+GDGVAFAGV Sbjct 61 DAVGCSISQASTSVMAEELVGATVDDAFGKLHEFERMVTSRGSVEGDADVIGDGVAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEEVTD 155 +KYPARVKCALLGW AF+ A A TD Sbjct 121 SKYPARVKCALLGWKAFEAAAYDAGARPAATTD 153 >gi|300784739|ref|YP_003765030.1| nitrogen fixation protein NifU [Amycolatopsis mediterranei U32] gi|299794253|gb|ADJ44628.1| nitrogen fixation protein NifU [Amycolatopsis mediterranei U32] gi|340526163|gb|AEK41368.1| nitrogen fixation protein NifU [Amycolatopsis mediterranei S699] Length=149 Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 97/150 (65%), Positives = 116/150 (78%), Gaps = 2/150 (1%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LE +YQ++ILDHYKHP RGLRE F A+ + VNP CGDEVTLRV L D +V DVSY Sbjct 1 MNLESMYQEIILDHYKHPHGRGLREEFDAESFQVNPTCGDEVTLRVKL--DDGKVADVSY 58 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQA+TSV+T+ V+G V A +DAF E++ +G V DEDVL DGVAFAGV Sbjct 59 DGQGCSISQASTSVMTDLVVGHTVEEAFTTMDAFVELMQGKGKVEPDEDVLEDGVAFAGV 118 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEE 152 AKYPARVKCALLGWMAFKDA+A+ + E+ Sbjct 119 AKYPARVKCALLGWMAFKDAVARTTSGAEK 148 >gi|257055647|ref|YP_003133479.1| SUF system FeS assembly protein, NifU family [Saccharomonospora viridis DSM 43017] gi|256585519|gb|ACU96652.1| SUF system FeS assembly protein, NifU family [Saccharomonospora viridis DSM 43017] Length=150 Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 99/145 (69%), Positives = 117/145 (81%), Gaps = 2/145 (1%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LE +YQ++ILDHYK+P RGLREP+ A+ + VNP CGDEVTLRV L DG V DVSY Sbjct 1 MDLESMYQEIILDHYKNPHARGLREPYDAESFQVNPTCGDEVTLRVRL--DGDTVADVSY 58 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 +GQGCSISQA+TSVLT+ VIG+ V AL ++AFTE++ RG V DEDVL DGVAFAGV Sbjct 59 EGQGCSISQASTSVLTDLVIGRSVDEALAKLEAFTELMQGRGEVEPDEDVLEDGVAFAGV 118 Query 123 AKYPARVKCALLGWMAFKDALAQAS 147 AKYPARVKCALLGWMAFKDA+ + S Sbjct 119 AKYPARVKCALLGWMAFKDAVGRTS 143 >gi|68536057|ref|YP_250762.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium jeikeium K411] gi|68263656|emb|CAI37144.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium jeikeium K411] Length=153 Score = 203 bits (517), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 90/144 (63%), Positives = 116/144 (81%), Gaps = 0/144 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 ++LEQ+YQ+VILDHYKHPQH GLREPF A+V+HVN CGDE+TLR+ LSED V D+SY Sbjct 1 MKLEQMYQEVILDHYKHPQHAGLREPFEAEVHHVNTSCGDELTLRLHLSEDNQTVEDISY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D GCSISQA+TSV+ E+++G+ V A + F MV+SRG + GD++++GDG+AFAGV Sbjct 61 DAVGCSISQASTSVMAEELVGRPVAEAFAKLAEFERMVTSRGKIEGDDEIIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQA 146 +KYPARVKCALLGW AF+ A +A Sbjct 121 SKYPARVKCALLGWKAFEAAATEA 144 >gi|256379156|ref|YP_003102816.1| SUF system FeS assembly protein, NifU family [Actinosynnema mirum DSM 43827] gi|255923459|gb|ACU38970.1| SUF system FeS assembly protein, NifU family [Actinosynnema mirum DSM 43827] Length=147 Score = 203 bits (516), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 96/147 (66%), Positives = 121/147 (83%), Gaps = 2/147 (1%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 ++L+Q+YQ++ILDHYK+P RGLR+P+ A+ + +NP CGDEVTLRV L DG V DVSY Sbjct 1 MQLQQMYQEIILDHYKNPHGRGLRDPYDAESHQINPTCGDEVTLRVKL--DGPLVADVSY 58 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 DGQGCSISQAATSVLT+ V+G+ V +A+ +DAF E++ RG V DEDVL DG+AFAGV Sbjct 59 DGQGCSISQAATSVLTDLVVGKPVEQAMGKLDAFVELMQGRGQVEPDEDVLEDGIAFAGV 118 Query 123 AKYPARVKCALLGWMAFKDALAQASEA 149 AKYPARVKCALLGWMAFKDA++++ A Sbjct 119 AKYPARVKCALLGWMAFKDAVSRSEGA 145 >gi|227503598|ref|ZP_03933647.1| iron-sulfur cluster formation protein IscU [Corynebacterium accolens ATCC 49725] gi|306836140|ref|ZP_07469126.1| NifU family SUF system FeS assembly protein [Corynebacterium accolens ATCC 49726] gi|227075634|gb|EEI13597.1| iron-sulfur cluster formation protein IscU [Corynebacterium accolens ATCC 49725] gi|304567990|gb|EFM43569.1| NifU family SUF system FeS assembly protein [Corynebacterium accolens ATCC 49726] Length=150 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 94/150 (63%), Positives = 117/150 (78%), Gaps = 0/150 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + L+ +YQDVILDHYK+PQH GLREPF A+V+HVNP CGDE+TLRV LS DG V DVSY Sbjct 1 MNLDSMYQDVILDHYKNPQHAGLREPFQAEVHHVNPSCGDELTLRVNLSADGKTVEDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D +GCSISQA+TSV+ E+++G + A + F +MV+SRG GDED++GDGVAFAGV Sbjct 61 DAEGCSISQASTSVMAEEIVGLPLEEANKKLAEFEKMVTSRGQDEGDEDIIGDGVAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQASEAFEE 152 ++YPARVKCALLGW AF+ A A A E+ Sbjct 121 SQYPARVKCALLGWKAFQAATADALNEVEK 150 >gi|336325616|ref|YP_004605582.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium resistens DSM 45100] gi|336101598|gb|AEI09418.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium resistens DSM 45100] Length=152 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 90/140 (65%), Positives = 116/140 (83%), Gaps = 0/140 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 ++LEQ+YQ+VILDHYKHPQH GLR+PF A+V+HVN CGDE+TLRV +SEDG V DVSY Sbjct 1 MKLEQMYQEVILDHYKHPQHAGLRDPFDAEVHHVNTSCGDELTLRVKISEDGKTVEDVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 + GCSISQA+TSV+ E+++GQ V A + F +MV+SRG + GD++++GDGVAF+GV Sbjct 61 EAIGCSISQASTSVMAEEIVGQPVEEAFAKLAEFEKMVTSRGRIEGDDEIIGDGVAFSGV 120 Query 123 AKYPARVKCALLGWMAFKDA 142 +KYPARVKCALLGW AF+ A Sbjct 121 SKYPARVKCALLGWKAFEAA 140 >gi|300781154|ref|ZP_07091008.1| NifU family SUF system FeS assembly protein [Corynebacterium genitalium ATCC 33030] gi|300532861|gb|EFK53922.1| NifU family SUF system FeS assembly protein [Corynebacterium genitalium ATCC 33030] Length=149 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 93/144 (65%), Positives = 116/144 (81%), Gaps = 0/144 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 + LE +YQ+VILDHYK+PQ+ GLR+PF A+V+HVNP CGDE+TLRV LSEDG V D+SY Sbjct 1 MNLEAMYQEVILDHYKNPQNAGLRDPFDAEVHHVNPSCGDELTLRVQLSEDGNTVEDISY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D GCSISQA+TSVLTE+VIG V A+ +DAF M++S+G GD ++GDG+AFAGV Sbjct 61 DAVGCSISQASTSVLTEEVIGLPVAEAMKKLDAFELMITSKGEEEGDPGMIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQA 146 AK+PARVKCALLGW AF+ A + A Sbjct 121 AKFPARVKCALLGWKAFQAATSDA 144 >gi|172040691|ref|YP_001800405.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium urealyticum DSM 7109] gi|171851995|emb|CAQ04971.1| NifU-like protein involved in Fe-S cluster formation [Corynebacterium urealyticum DSM 7109] Length=155 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 88/144 (62%), Positives = 116/144 (81%), Gaps = 0/144 (0%) Query 3 LRLEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTRVTDVSY 62 +R+EQ+YQ+VILDHYKHP+H GLREP+ A+V+HVN CGDE+TLRV LSED V D+SY Sbjct 1 MRMEQMYQEVILDHYKHPEHAGLREPYNAEVFHVNTSCGDELTLRVHLSEDHKTVQDISY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 D GCSISQA+TSV+ ++++G+ V A + F +M++SRG + GDED++GDG+AF+GV Sbjct 61 DAVGCSISQASTSVMADEIVGKPVTEAFAKLAEFEKMITSRGKLEGDEDLIGDGIAFSGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQA 146 +KYPARVKCALLGW AF+ A A Sbjct 121 SKYPARVKCALLGWKAFEAAAIDA 144 >gi|258652490|ref|YP_003201646.1| SUF system FeS assembly protein, NifU family [Nakamurella multipartita DSM 44233] gi|258555715|gb|ACV78657.1| SUF system FeS assembly protein, NifU family [Nakamurella multipartita DSM 44233] Length=167 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 93/143 (66%), Positives = 115/143 (81%), Gaps = 2/143 (1%) Query 5 LEQIYQDVILDHYKHPQHRGLREPFGAQVYHVNPICGDEVTLRVALSEDGTR--VTDVSY 62 +E++YQ++ILDHY+ P H GLR+PF AQV+HVNP CGDE+TLRV L + G V DVSY Sbjct 1 MEKLYQEIILDHYRAPHHYGLRDPFEAQVHHVNPTCGDEITLRVHLVDTGDEPVVADVSY 60 Query 63 DGQGCSISQAATSVLTEQVIGQRVPRALNIVDAFTEMVSSRGTVPGDEDVLGDGVAFAGV 122 + GCSISQA+TSVLT+ IG+ + +D FT M++SRGTV GDE+V+GDG+AFAGV Sbjct 61 EALGCSISQASTSVLTDLAIGRPLADVFEALDDFTAMITSRGTVEGDEEVIGDGIAFAGV 120 Query 123 AKYPARVKCALLGWMAFKDALAQ 145 AKYPARVKCALLGWMAFKDA+ Q Sbjct 121 AKYPARVKCALLGWMAFKDAVVQ 143 Lambda K H 0.318 0.135 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130518307686 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40