BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1470
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
gi|308231849|ref|ZP_07413995.2| thioredoxin trxA [Mycobacterium ... 258 2e-67
gi|15608608|ref|NP_215986.1| thioredoxin TRXA [Mycobacterium tub... 257 3e-67
gi|240172213|ref|ZP_04750872.1| thioredoxin TrxA [Mycobacterium ... 171 4e-41
gi|183982289|ref|YP_001850580.1| thioredoxin TrxA [Mycobacterium... 168 3e-40
gi|118617139|ref|YP_905471.1| thioredoxin TrxA [Mycobacterium ul... 167 6e-40
gi|126435065|ref|YP_001070756.1| thioredoxin [Mycobacterium sp. ... 118 4e-25
gi|325674215|ref|ZP_08153904.1| thioredoxin [Rhodococcus equi AT... 117 5e-25
gi|15840931|ref|NP_335968.1| thioredoxin [Mycobacterium tubercul... 117 8e-25
gi|312139905|ref|YP_004007241.1| thioredoxin [Rhodococcus equi 1... 116 9e-25
gi|108799411|ref|YP_639608.1| thioredoxin [Mycobacterium sp. MCS... 116 1e-24
gi|240172214|ref|ZP_04750873.1| thioredoxin TrxB1 [Mycobacterium... 115 3e-24
gi|169629823|ref|YP_001703472.1| thioredoxin TrxB [Mycobacterium... 115 3e-24
gi|41407294|ref|NP_960130.1| hypothetical protein MAP1196 [Mycob... 114 4e-24
gi|254819540|ref|ZP_05224541.1| thioredoxin [Mycobacterium intra... 114 4e-24
gi|333919154|ref|YP_004492735.1| thioredoxin [Amycolicicoccus su... 114 4e-24
gi|111027061|ref|YP_709039.1| thioredoxin [Rhodococcus jostii RH... 113 8e-24
gi|342858761|ref|ZP_08715416.1| thioredoxin [Mycobacterium colom... 113 1e-23
gi|296170670|ref|ZP_06852245.1| thioredoxin [Mycobacterium paras... 113 1e-23
gi|240171243|ref|ZP_04749902.1| thioredoxin TrxB1_1 [Mycobacteri... 112 1e-23
gi|336458023|gb|EGO37010.1| thioredoxin [Mycobacterium avium sub... 112 2e-23
gi|226360132|ref|YP_002777910.1| thioredoxin [Rhodococcus opacus... 111 3e-23
gi|226306808|ref|YP_002766768.1| thioredoxin [Rhodococcus erythr... 111 4e-23
gi|302559635|ref|ZP_07311977.1| thioredoxin [Streptomyces griseo... 110 5e-23
gi|120403724|ref|YP_953553.1| thioredoxin [Mycobacterium vanbaal... 110 6e-23
gi|111018003|ref|YP_700975.1| thioredoxin [Rhodococcus jostii RH... 110 7e-23
gi|118472572|ref|YP_887453.1| thioredoxin [Mycobacterium smegmat... 110 1e-22
gi|229492771|ref|ZP_04386572.1| thioredoxin [Rhodococcus erythro... 109 1e-22
gi|296170322|ref|ZP_06851913.1| thioredoxin [Mycobacterium paras... 108 2e-22
gi|229818161|ref|ZP_04448443.1| hypothetical protein BIFANG_0345... 108 3e-22
gi|315446685|ref|YP_004079564.1| thioredoxin [Mycobacterium sp. ... 108 4e-22
gi|183982290|ref|YP_001850581.1| thioredoxin TrxB1 [Mycobacteriu... 107 4e-22
gi|108802270|ref|YP_642467.1| thioredoxin [Mycobacterium sp. MCS... 107 5e-22
gi|15827974|ref|NP_302237.1| thioredoxin [Mycobacterium leprae T... 107 5e-22
gi|281415194|ref|ZP_06246936.1| thioredoxin [Micrococcus luteus ... 107 8e-22
gi|296140196|ref|YP_003647439.1| thioredoxin [Tsukamurella pauro... 106 1e-21
gi|239918591|ref|YP_002958149.1| thioredoxin [Micrococcus luteus... 105 2e-21
gi|226366596|ref|YP_002784379.1| thioredoxin [Rhodococcus opacus... 105 2e-21
gi|111025660|ref|YP_708080.1| thioredoxin [Rhodococcus jostii RH... 105 2e-21
gi|149917305|ref|ZP_01905804.1| thioredoxin [Plesiocystis pacifi... 105 3e-21
gi|145221580|ref|YP_001132258.1| thioredoxin [Mycobacterium gilv... 104 5e-21
gi|118617140|ref|YP_905472.1| thioredoxin TrxB1 [Mycobacterium u... 104 5e-21
gi|126438252|ref|YP_001073943.1| thioredoxin [Mycobacterium sp. ... 104 5e-21
gi|183982651|ref|YP_001850942.1| thioredoxin TrxB1_1 [Mycobacter... 104 5e-21
gi|289706462|ref|ZP_06502816.1| thioredoxin [Micrococcus luteus ... 104 5e-21
gi|310286936|ref|YP_003938194.1| thioredoxin [Bifidobacterium bi... 103 6e-21
gi|311063815|ref|YP_003970540.1| thioredoxin [Bifidobacterium bi... 103 6e-21
gi|313139624|ref|ZP_07801817.1| thiol-disulfide isomerase and th... 103 1e-20
gi|326382218|ref|ZP_08203910.1| thioredoxin [Gordonia neofelifae... 102 1e-20
gi|145224254|ref|YP_001134932.1| thioredoxin [Mycobacterium gilv... 102 2e-20
gi|309812561|ref|ZP_07706308.1| thioredoxin [Dermacoccus sp. Ell... 102 2e-20
>gi|308231849|ref|ZP_07413995.2| thioredoxin trxA [Mycobacterium tuberculosis SUMu001]
gi|308369450|ref|ZP_07417815.2| thioredoxin trxA [Mycobacterium tuberculosis SUMu002]
gi|308370731|ref|ZP_07422530.2| thioredoxin trxA [Mycobacterium tuberculosis SUMu003]
21 more sequence titles
Length=126
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/124 (100%), Positives = 124/124 (100%), Gaps = 0/124 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE
Sbjct 3 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 62
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGEGIGPGT 120
KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGEGIGPGT
Sbjct 63 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGEGIGPGT 122
Query 121 KTSS 124
KTSS
Sbjct 123 KTSS 126
>gi|15608608|ref|NP_215986.1| thioredoxin TRXA [Mycobacterium tuberculosis H37Rv]
gi|15840930|ref|NP_335967.1| thioredoxin [Mycobacterium tuberculosis CDC1551]
gi|31792664|ref|NP_855157.1| thioredoxin TRXA [Mycobacterium bovis AF2122/97]
54 more sequence titles
Length=124
Score = 257 bits (657), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE
Sbjct 1 MTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGEGIGPGT 120
KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGEGIGPGT
Sbjct 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGEGIGPGT 120
Query 121 KTSS 124
KTSS
Sbjct 121 KTSS 124
>gi|240172213|ref|ZP_04750872.1| thioredoxin TrxA [Mycobacterium kansasii ATCC 12478]
Length=118
Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/111 (71%), Positives = 91/111 (82%), Gaps = 0/111 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ TR+LTA F+QT+ N NVLVY WAPLC PC + TPTYE SS KH D+VHGK+N ETE
Sbjct 1 MATRELTAQNFKQTVYGNDNVLVYIWAPLCPPCAVLTPTYEGSSDKHPDIVHGKINFETE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSP 111
++L SIAGV LLPTLMAFKKGKLVFKQAG+ANPA+MD+LV+QLRAY P
Sbjct 61 QELVSIAGVTLLPTLMAFKKGKLVFKQAGVANPAVMDDLVRQLRAYRVDLP 111
>gi|183982289|ref|YP_001850580.1| thioredoxin TrxA [Mycobacterium marinum M]
gi|183175615|gb|ACC40725.1| thioredoxin TrxA [Mycobacterium marinum M]
Length=118
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/109 (71%), Positives = 89/109 (82%), Gaps = 0/109 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T DLTAA F+QT+ N +VLVY WAPLCAPCD+F PTYE SS KH D+VHGKVN ETE
Sbjct 1 MATEDLTAANFKQTVHGNDSVLVYVWAPLCAPCDVFAPTYEGSSDKHPDIVHGKVNFETE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFK 109
++L S A VK LPTLMAFKKGKLVFKQAGIANPA+MD+LV+ LR Y +
Sbjct 61 QELVSAAAVKHLPTLMAFKKGKLVFKQAGIANPAVMDDLVRHLREYRIE 109
>gi|118617139|ref|YP_905471.1| thioredoxin TrxA [Mycobacterium ulcerans Agy99]
gi|118569249|gb|ABL04000.1| thioredoxin TrxA [Mycobacterium ulcerans Agy99]
Length=118
Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/109 (70%), Positives = 89/109 (82%), Gaps = 0/109 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T DLTAA F+QT+ N +VLVY WAPLCAPCD+F PTYE SS KH D+VHGKVN E+E
Sbjct 1 MATEDLTAANFKQTVHGNDSVLVYVWAPLCAPCDVFAPTYEGSSDKHPDIVHGKVNFESE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFK 109
++L S A VK LPTLMAFKKGKLVFKQAGIANPA+MD+LV+ LR Y +
Sbjct 61 QELVSAAAVKHLPTLMAFKKGKLVFKQAGIANPAVMDDLVRHLREYRIE 109
>gi|126435065|ref|YP_001070756.1| thioredoxin [Mycobacterium sp. JLS]
gi|126234865|gb|ABN98265.1| thioredoxin [Mycobacterium sp. JLS]
Length=121
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/106 (58%), Positives = 77/106 (73%), Gaps = 0/106 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TTRDLTA F +TI+ N VLV FWA C PC F PT+ ASS KH DVVH KV+ E E
Sbjct 1 MTTRDLTADQFNETITDNEIVLVDFWASWCGPCRAFAPTFAASSEKHPDVVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAY 106
+ LA+ A ++ +PTLMAFKKGKLVF QAG PA +++LVQQ++ +
Sbjct 61 QQLAAAADIRSIPTLMAFKKGKLVFNQAGALPPAALEDLVQQVKEF 106
>gi|325674215|ref|ZP_08153904.1| thioredoxin [Rhodococcus equi ATCC 33707]
gi|325554895|gb|EGD24568.1| thioredoxin [Rhodococcus equi ATCC 33707]
Length=130
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/114 (48%), Positives = 77/114 (68%), Gaps = 0/114 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
V T+ LT F+QT+ N VLV FWA C PC F PT++ASS KH DVVHGK++ E E
Sbjct 10 VATQTLTQQNFKQTVEDNDIVLVDFWASWCGPCRNFAPTFDASSEKHPDVVHGKMDTEAE 69
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGE 114
++ A+ AG++ +PT+MAF++G LVF QAG PA +++L+ Q++A + E
Sbjct 70 QEFAAGAGIRSIPTIMAFREGVLVFNQAGALPPAALEDLITQVKALDMDAVRAE 123
>gi|15840931|ref|NP_335968.1| thioredoxin [Mycobacterium tuberculosis CDC1551]
gi|31792665|ref|NP_855158.1| thioredoxin TRXB1 [Mycobacterium bovis AF2122/97]
gi|57116870|ref|YP_177815.1| thioredoxin TRXB1 [Mycobacterium tuberculosis H37Rv]
77 more sequence titles
Length=123
Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/115 (54%), Positives = 82/115 (72%), Gaps = 2/115 (1%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TTRDLTAA F +TI ++ VLV +WA C PC F PT+ SS KH DVVH KV+ E E
Sbjct 1 MTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGEG 115
++LA+ A ++ +PT+MAFK GKL+F QAG PA +++LVQQL+AY + AGE
Sbjct 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE--AGEA 113
>gi|312139905|ref|YP_004007241.1| thioredoxin [Rhodococcus equi 103S]
gi|311889244|emb|CBH48558.1| putative thioredoxin [Rhodococcus equi 103S]
Length=121
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/114 (47%), Positives = 77/114 (68%), Gaps = 0/114 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+ LT F+QT+ N VLV FWA C PC F PT++ASS KH DVVHGK++ E E
Sbjct 1 MATQTLTQQNFKQTVEDNDIVLVDFWASWCGPCRNFAPTFDASSEKHPDVVHGKMDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGE 114
++ A+ AG++ +PT+MAF++G LVF QAG PA +++L+ Q++A + E
Sbjct 61 QEFAAGAGIRSIPTIMAFREGVLVFNQAGALPPAALEDLITQVKALDMDAVRAE 114
>gi|108799411|ref|YP_639608.1| thioredoxin [Mycobacterium sp. MCS]
gi|119868524|ref|YP_938476.1| thioredoxin [Mycobacterium sp. KMS]
gi|108769830|gb|ABG08552.1| thioredoxin [Mycobacterium sp. MCS]
gi|119694613|gb|ABL91686.1| thioredoxin [Mycobacterium sp. KMS]
Length=121
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/106 (57%), Positives = 77/106 (73%), Gaps = 0/106 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TTRDLTA F +TI+ N VLV FWA C PC F PT+ ASS KH DVVH KV+ E E
Sbjct 1 MTTRDLTADQFNETITDNEIVLVDFWASWCGPCRAFAPTFAASSEKHPDVVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAY 106
+ LA+ A ++ +PTLMAFKKGKLVF QAG PA +++LVQ+++ +
Sbjct 61 QQLAAAADIRSIPTLMAFKKGKLVFNQAGALPPAALEDLVQKVKEF 106
>gi|240172214|ref|ZP_04750873.1| thioredoxin TrxB1 [Mycobacterium kansasii ATCC 12478]
Length=109
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/106 (56%), Positives = 79/106 (75%), Gaps = 0/106 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+DLTAA F +T++ N VLV FWA C PC F PT++ASS KH DVV+ KVN E E
Sbjct 1 MATKDLTAAQFNETVNDNDMVLVDFWASWCGPCRSFAPTFQASSEKHPDVVYAKVNTEEE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAY 106
++LA+ A ++ +PTLMAFKKG+L+F Q G PA +++LVQQL+AY
Sbjct 61 QELAAAAQIRSIPTLMAFKKGQLLFNQPGALPPAALEDLVQQLKAY 106
>gi|169629823|ref|YP_001703472.1| thioredoxin TrxB [Mycobacterium abscessus ATCC 19977]
gi|169241790|emb|CAM62818.1| Probable thioredoxin TrxB [Mycobacterium abscessus]
Length=117
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/104 (54%), Positives = 70/104 (68%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ TRD+TA F I N VLV FWA C PC F P +EASS + DVVH KV+ E E
Sbjct 1 MATRDITADAFNDLIHDNDIVLVDFWASWCGPCRQFGPVFEASSEANPDVVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ LAS A ++ +PTLMAFK+G+LVF QAG PA + +LVQQ+R
Sbjct 61 QALASAANIRSIPTLMAFKQGQLVFNQAGALPPASLADLVQQVR 104
>gi|41407294|ref|NP_960130.1| hypothetical protein MAP1196 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464906|ref|YP_882490.1| thioredoxin [Mycobacterium avium 104]
gi|254775753|ref|ZP_05217269.1| thioredoxin [Mycobacterium avium subsp. avium ATCC 25291]
gi|41395646|gb|AAS03513.1| TrxB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118166193|gb|ABK67090.1| thioredoxin [Mycobacterium avium 104]
Length=117
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/114 (53%), Positives = 78/114 (69%), Gaps = 0/114 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TT DLTA F +TI N VLV FWA C PC F PT++ASS KH D+VH KV+ E E
Sbjct 1 MTTVDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASSEKHPDIVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGE 114
+ LA+ A ++ +PTLMAFKKGKL+F Q G PA +++LVQQ+RA+ + E
Sbjct 61 QQLAAAAQIRSIPTLMAFKKGKLLFNQPGALPPAALEDLVQQVRAFDVDAAIAE 114
>gi|254819540|ref|ZP_05224541.1| thioredoxin [Mycobacterium intracellulare ATCC 13950]
Length=117
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/106 (56%), Positives = 76/106 (72%), Gaps = 0/106 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TT DLTA F +TI N VLV FWA C PC F PT++ASS KH D+VH KV+ E E
Sbjct 1 MTTLDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASSEKHPDIVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAY 106
+ LA+ A ++ +PTLMAFKKGKL+F Q G PA +++LVQQ+RA+
Sbjct 61 QQLAAAAQIRSIPTLMAFKKGKLLFNQPGALPPAALEDLVQQVRAF 106
>gi|333919154|ref|YP_004492735.1| thioredoxin [Amycolicicoccus subflavus DQS3-9A1]
gi|333481375|gb|AEF39935.1| Thioredoxin [Amycolicicoccus subflavus DQS3-9A1]
Length=126
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 74/104 (72%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T++LT A F+ TI++N VLV FWA C PC F PT+EASS KH DVVH KV+ E E
Sbjct 1 MATQNLTHADFESTITSNDVVLVDFWAEWCGPCKQFAPTFEASSSKHPDVVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ LA+ AG++ +PT+MAF++G LVF Q G P +++L+ Q++
Sbjct 61 QSLAAAAGIQSIPTVMAFREGILVFAQPGALPPDALESLITQVK 104
>gi|111027061|ref|YP_709039.1| thioredoxin [Rhodococcus jostii RHA1]
gi|110825600|gb|ABH00881.1| probable thioredoxin [Rhodococcus jostii RHA1]
Length=125
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/104 (50%), Positives = 71/104 (69%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TT++LT F TI+ N+ VLV FWA C PC F PT+E SSR+H DVVH KVN E E
Sbjct 1 MTTKNLTHTDFASTIADNAIVLVDFWASWCGPCRAFAPTFEQSSRRHPDVVHAKVNTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ +AS A ++ +PT+MAF+ G LV+ Q G PA ++ L+ Q++
Sbjct 61 QQIASAADIRSIPTIMAFRDGVLVYSQPGALPPAALEELISQIK 104
>gi|342858761|ref|ZP_08715416.1| thioredoxin [Mycobacterium colombiense CECT 3035]
gi|342134465|gb|EGT87645.1| thioredoxin [Mycobacterium colombiense CECT 3035]
Length=117
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/106 (55%), Positives = 76/106 (72%), Gaps = 0/106 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TT DLTA F +TI N VLV FWA C PC F PT++AS+ KH D+VH KV+ E E
Sbjct 1 MTTLDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASAEKHPDIVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAY 106
+ LA+ A ++ +PTLMAFKKGKL+F Q G PA +++LVQQ+RA+
Sbjct 61 QQLAAAAQIRSIPTLMAFKKGKLLFNQPGALPPAALEDLVQQVRAF 106
>gi|296170670|ref|ZP_06852245.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894659|gb|EFG74393.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=117
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/114 (52%), Positives = 78/114 (69%), Gaps = 0/114 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TT DLTA F +TI N VLV FWA C PC F PT++ASS KH D+VH KV+ E E
Sbjct 1 MTTLDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASSEKHPDIVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGE 114
+ LA+ A ++ +PTLMAFKKGKL+F Q G PA +++LVQQ++A+ + E
Sbjct 61 QQLAAAAQIRSIPTLMAFKKGKLLFNQPGALPPAALEDLVQQVKAFDVDAAIAE 114
>gi|240171243|ref|ZP_04749902.1| thioredoxin TrxB1_1 [Mycobacterium kansasii ATCC 12478]
Length=124
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/105 (47%), Positives = 73/105 (70%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T +LT F+ T++ N VLV FWA C PC F P YE S+R H DVVH KV+ + E
Sbjct 1 MATVNLTHDTFESTVTDNQLVLVDFWAAYCRPCQAFAPIYEKSARTHPDVVHAKVDTQAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
++LA+ AG++ +PT+MAF+ G LV+ QAG PA+++NL+ Q+++
Sbjct 61 RELAAAAGIRSIPTIMAFRDGVLVYSQAGALPPAVLENLIGQMKS 105
>gi|336458023|gb|EGO37010.1| thioredoxin [Mycobacterium avium subsp. paratuberculosis S397]
Length=117
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/114 (52%), Positives = 77/114 (68%), Gaps = 0/114 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TT DLTA F +TI N VLV FWA C PC F PT++ASS KH D+VH KV+ E E
Sbjct 1 MTTVDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASSEKHPDIVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGE 114
+ LA+ A ++ +PTL AFKKGKL+F Q G PA +++LVQQ+RA+ + E
Sbjct 61 QQLAAAAQIRSIPTLTAFKKGKLLFNQPGALPPAALEDLVQQVRAFDVDAAIAE 114
>gi|226360132|ref|YP_002777910.1| thioredoxin [Rhodococcus opacus B4]
gi|226238617|dbj|BAH48965.1| thioredoxin [Rhodococcus opacus B4]
Length=122
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/105 (48%), Positives = 72/105 (69%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+ LT F +T++ N VLV FWA C PC F PT+EASS +H DVVH KV+ E E
Sbjct 1 MATKTLTQQNFDETVTGNDVVLVDFWASWCGPCRSFAPTFEASSEQHPDVVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+ +A+ A ++ +PT+MAF++G LVF Q G PA +++LV Q++A
Sbjct 61 QGIAAAANIRSIPTIMAFREGVLVFSQPGALPPAALEDLVTQVKA 105
>gi|226306808|ref|YP_002766768.1| thioredoxin [Rhodococcus erythropolis PR4]
gi|226185925|dbj|BAH34029.1| thioredoxin [Rhodococcus erythropolis PR4]
Length=128
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/105 (50%), Positives = 71/105 (68%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
V T+ LT F +TI+ + VLV FWA C PC F PT+EASS KH DVVH KV+ E E
Sbjct 6 VATQTLTQQNFDETINGSDVVLVDFWASWCGPCRQFAPTFEASSEKHADVVHAKVDTEAE 65
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+ +A+ A ++ +PT+MAF++G LVF QAG A ++ LV Q++A
Sbjct 66 QGIAAAANIRSIPTIMAFREGVLVFNQAGALPAAQLEELVTQVKA 110
>gi|302559635|ref|ZP_07311977.1| thioredoxin [Streptomyces griseoflavus Tu4000]
gi|302477253|gb|EFL40346.1| thioredoxin [Streptomyces griseoflavus Tu4000]
Length=118
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/104 (50%), Positives = 68/104 (66%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
++T DLTAA F+ T++ N VLV FWA C PC F P YE +SR H D+V GKV+ E E
Sbjct 1 MSTVDLTAADFENTVTGNDIVLVDFWASWCGPCRTFAPVYEKASRTHSDIVFGKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ LA+ A + +PTLMAF++G LVF Q G P +D L+ +R
Sbjct 61 QSLAAAADITSIPTLMAFREGVLVFSQPGALPPQALDQLITAVR 104
>gi|120403724|ref|YP_953553.1| thioredoxin [Mycobacterium vanbaalenii PYR-1]
gi|119956542|gb|ABM13547.1| thioredoxin [Mycobacterium vanbaalenii PYR-1]
Length=120
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/110 (52%), Positives = 76/110 (70%), Gaps = 0/110 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ TRD+TA F TI+ N VLV FWA C PC F PT+ ASS KH DVV+ KV+ E E
Sbjct 1 MATRDITAQEFNDTINDNDIVLVDFWASWCGPCKAFAPTFAASSEKHPDVVYAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKS 110
+ LA+ A ++ +PTLMAFKKGKLVF QAG PA +++L+QQ++ + +
Sbjct 61 QQLAAAADIRSIPTLMAFKKGKLVFNQAGALPPAALEDLIQQVKDFDIDA 110
>gi|111018003|ref|YP_700975.1| thioredoxin [Rhodococcus jostii RHA1]
gi|110817533|gb|ABG92817.1| thioredoxin [Rhodococcus jostii RHA1]
Length=122
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 49/105 (47%), Positives = 72/105 (69%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+ LT F +T++ N VLV FWA C PC F PT+EASS +H DVVH KV+ E E
Sbjct 1 MATKTLTQQNFDETVTGNDVVLVDFWASWCGPCRSFAPTFEASSEQHPDVVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+ +A+ A ++ +PT+MAF++G LVF Q G PA +++L+ Q++A
Sbjct 61 QGIAAAANIRSIPTIMAFREGVLVFSQPGALPPAALEDLLTQVKA 105
>gi|118472572|ref|YP_887453.1| thioredoxin [Mycobacterium smegmatis str. MC2 155]
gi|118173859|gb|ABK74755.1| thioredoxin [Mycobacterium smegmatis str. MC2 155]
Length=124
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/119 (48%), Positives = 78/119 (66%), Gaps = 0/119 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
++T D+TA F T++ N VLV FWA C PC F PT+ AS+ KH DVVH KV+ E E
Sbjct 1 MSTLDITAEQFNDTVNDNEIVLVDFWASWCGPCKAFAPTFAASAEKHPDVVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGEGIGPG 119
+ LA+ A ++ +PTLMAFKKGKLVF QAG PA +++LVQ+++ + + E G
Sbjct 61 QALAAAADIRSIPTLMAFKKGKLVFNQAGALPPAALEDLVQKIKEFDIDAAMREQAAQG 119
>gi|229492771|ref|ZP_04386572.1| thioredoxin [Rhodococcus erythropolis SK121]
gi|229320430|gb|EEN86250.1| thioredoxin [Rhodococcus erythropolis SK121]
Length=123
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/105 (49%), Positives = 71/105 (68%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+ LT F +TI+ + VLV FWA C PC F PT+EASS KH DVVH KV+ E E
Sbjct 1 MATQTLTQQNFDETINGSDVVLVDFWASWCGPCRQFAPTFEASSEKHADVVHAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+ +A+ A ++ +PT+MAF++G LVF QAG A ++ LV Q++A
Sbjct 61 QGIAAAANIRSIPTIMAFREGVLVFNQAGALPAAQLEELVTQVKA 105
>gi|296170322|ref|ZP_06851913.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895045|gb|EFG74764.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=124
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/109 (43%), Positives = 73/109 (67%), Gaps = 0/109 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+T + LTAA F+ TI + VLV FWAP C PC F PT+E S++ H D+V+ KV+ + E
Sbjct 1 MTVKSLTAADFESTILTSPIVLVDFWAPWCGPCRAFAPTFERSAQNHPDIVYAKVDTDAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFK 109
+LA G++ +PT+MAF+ G LV+ Q G +PA++++L+ Q++ +
Sbjct 61 PELAGTVGIRSVPTIMAFRDGILVYSQPGAMSPAVLEDLIDQIKGLDME 109
>gi|229818161|ref|ZP_04448443.1| hypothetical protein BIFANG_03453 [Bifidobacterium angulatum
DSM 20098]
gi|229784412|gb|EEP20526.1| hypothetical protein BIFANG_03453 [Bifidobacterium angulatum
DSM 20098]
Length=112
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/107 (48%), Positives = 73/107 (69%), Gaps = 2/107 (1%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRK--HFDVVHGKVNIE 58
++T L++A F+QTI+ N V V FWA C PC F P YEA+S K + DVV GK++I+
Sbjct 1 MSTTQLSSADFEQTITGNDLVFVDFWATWCGPCRAFGPIYEAASNKPENSDVVFGKIDID 60
Query 59 TEKDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+DLA AG++ +PTLM KKG+++FKQAG A +D+L+ Q +A
Sbjct 61 ANQDLAQAAGIQAVPTLMVVKKGQIIFKQAGALQSADLDDLIAQAKA 107
>gi|315446685|ref|YP_004079564.1| thioredoxin [Mycobacterium sp. Spyr1]
gi|315264988|gb|ADU01730.1| thioredoxin [Mycobacterium sp. Spyr1]
Length=124
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/105 (47%), Positives = 72/105 (69%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+TT+ LT F+ TI+ N+ VLV FWA C PC F P YE SS+ H +VVH KV+ E E
Sbjct 1 MTTKSLTYDDFESTITGNAIVLVDFWASWCGPCRAFGPVYERSSQAHPEVVHAKVDTEHE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+DLA+ + +PT+MAF+ G LV++QAG PA +++L+ +++A
Sbjct 61 RDLAATLEITSIPTVMAFRDGVLVYRQAGAMPPAALEDLITRVKA 105
>gi|183982290|ref|YP_001850581.1| thioredoxin TrxB1 [Mycobacterium marinum M]
gi|183175616|gb|ACC40726.1| thioredoxin TrxB1 [Mycobacterium marinum M]
Length=112
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/106 (53%), Positives = 77/106 (73%), Gaps = 0/106 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+DLTAA F +T++ N VLV FWA C PC F PT++ASS H DVV+ KV+ E E
Sbjct 4 MATQDLTAAKFSETVNDNDMVLVDFWASWCGPCRAFAPTFQASSEAHPDVVYAKVDTEAE 63
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAY 106
++LA+ A ++ +PTLMAFKKGKL+F Q G A +++LVQQL++Y
Sbjct 64 QELAAAAQIRSIPTLMAFKKGKLLFNQPGALPAAALEDLVQQLKSY 109
>gi|108802270|ref|YP_642467.1| thioredoxin [Mycobacterium sp. MCS]
gi|119871423|ref|YP_941375.1| thioredoxin [Mycobacterium sp. KMS]
gi|108772689|gb|ABG11411.1| thioredoxin [Mycobacterium sp. MCS]
gi|119697512|gb|ABL94585.1| thioredoxin [Mycobacterium sp. KMS]
Length=124
Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/105 (45%), Positives = 72/105 (69%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
++T+ LT F+ T++ N VLV FWAP C PC F P +E SS+ H DVVH KV+ + E
Sbjct 1 MSTKTLTYDNFEATVTGNPIVLVDFWAPWCGPCRAFAPVFERSSQTHPDVVHAKVDTQAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+DLA+ + +PT+MAF+ G LV++QAG PA +++L+ +++A
Sbjct 61 RDLAATLEISSIPTVMAFRDGVLVYRQAGALPPAALEDLITRVKA 105
>gi|15827974|ref|NP_302237.1| thioredoxin [Mycobacterium leprae TN]
gi|221230451|ref|YP_002503867.1| thioredoxin [Mycobacterium leprae Br4923]
gi|13093527|emb|CAC30771.1| thioredoxin [Mycobacterium leprae]
gi|219933558|emb|CAR71913.1| thioredoxin [Mycobacterium leprae Br4923]
Length=130
Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/121 (46%), Positives = 75/121 (62%), Gaps = 3/121 (2%)
Query 2 TTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETEK 61
T RDL A +TI+ N+ VLV FWA C P LF PT+ ASS KH DVVH V+ + E+
Sbjct 13 TRRDLIAEQLNETINVNNMVLVAFWASWCGPDRLFVPTFHASSNKHSDVVHLNVDTKAER 72
Query 62 DLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGEGIGPGTK 121
LA A ++ +PTL+AFKKGK + QAG PA+ LVQQ++A+ + +G+ P +
Sbjct 73 QLALAAQIRSIPTLVAFKKGKPLLSQAGDLTPAVPGYLVQQIKAFDV---SDDGVVPDEQ 129
Query 122 T 122
Sbjct 130 V 130
>gi|281415194|ref|ZP_06246936.1| thioredoxin [Micrococcus luteus NCTC 2665]
Length=163
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/104 (48%), Positives = 68/104 (66%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
V T+DLT F T++ N VLV FWA C PC F P +EA+S KH DVV KV+ E +
Sbjct 21 VATKDLTLEEFGSTVAENDTVLVDFWAGWCGPCRQFAPVFEAASEKHDDVVFAKVDTEDQ 80
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ LA++AG+ +PTLMAF+ G LVF QAG ++ L++Q++
Sbjct 81 QQLAAMAGITSIPTLMAFRGGVLVFSQAGALPGTALEQLLEQVK 124
>gi|296140196|ref|YP_003647439.1| thioredoxin [Tsukamurella paurometabola DSM 20162]
gi|296028330|gb|ADG79100.1| thioredoxin [Tsukamurella paurometabola DSM 20162]
Length=122
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/104 (48%), Positives = 68/104 (66%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T +LTA F QT++ N VLV FWA C PC F PT+E +S H DVV KV+ E E
Sbjct 1 MATTELTAEKFDQTVTGNDIVLVDFWASWCGPCRAFAPTFEKASDAHPDVVFAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ LA+ A ++ +PTLM FKKG LV+ +AG PA +++L+ Q +
Sbjct 61 QGLAAAANIRSIPTLMVFKKGNLVYNEAGALPPAALEDLIAQAK 104
>gi|239918591|ref|YP_002958149.1| thioredoxin [Micrococcus luteus NCTC 2665]
gi|239839798|gb|ACS31595.1| thioredoxin [Micrococcus luteus NCTC 2665]
Length=143
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/104 (47%), Positives = 68/104 (66%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+DLT F T++ N VLV FWA C PC F P +EA+S KH DVV KV+ E +
Sbjct 1 MATKDLTLEEFGSTVAENDTVLVDFWAGWCGPCRQFAPVFEAASEKHDDVVFAKVDTEDQ 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ LA++AG+ +PTLMAF+ G LVF QAG ++ L++Q++
Sbjct 61 QQLAAMAGITSIPTLMAFRGGVLVFSQAGALPGTALEQLLEQVK 104
>gi|226366596|ref|YP_002784379.1| thioredoxin [Rhodococcus opacus B4]
gi|226245086|dbj|BAH55434.1| thioredoxin [Rhodococcus opacus B4]
Length=123
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/104 (47%), Positives = 69/104 (67%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+ LT F + ++ + VLV FWA C PC F PT+EASS KH DVV KV+ E E
Sbjct 1 MATQSLTQHTFDEVVAGHDLVLVDFWASWCGPCRAFAPTFEASSDKHTDVVFAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ LA+ A ++ +PT+MAF++G LVF QAG+ P +D LV +++
Sbjct 61 QGLAAAANIRSIPTVMAFREGLLVFSQAGVLPPEALDELVTKVK 104
>gi|111025660|ref|YP_708080.1| thioredoxin [Rhodococcus jostii RHA1]
gi|110824639|gb|ABG99922.1| probable thioredoxin [Rhodococcus jostii RHA1]
Length=123
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/104 (47%), Positives = 69/104 (67%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+ LT F +++N V+V FWA C PC F PT+EASS KH DVV KV+ E E
Sbjct 1 MATQSLTQRTFDDVVASNDVVIVDFWASWCGPCRAFAPTFEASSDKHPDVVFAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
LA+ A ++ +PT+MA+++G LVF QAG+ P +D+LV Q++
Sbjct 61 PGLAAAANIRSIPTVMAYREGVLVFNQAGMLPPEALDDLVAQVK 104
>gi|149917305|ref|ZP_01905804.1| thioredoxin [Plesiocystis pacifica SIR-1]
gi|149821912|gb|EDM81306.1| thioredoxin [Plesiocystis pacifica SIR-1]
Length=124
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 0/100 (0%)
Query 5 DLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETEKDLA 64
+LT FQ+TI N V V FWA C PC F P +EA S+KH D V GK++ E++K+LA
Sbjct 5 ELTKENFQETIDNNDIVFVDFWATWCGPCRQFAPVFEAESKKHEDAVFGKIDTESQKELA 64
Query 65 SIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ G++ +PTLMAF++ LVF QAG PA LV+Q++
Sbjct 65 ASFGIQAIPTLMAFREKVLVFNQAGALPPAAFRRLVEQVK 104
>gi|145221580|ref|YP_001132258.1| thioredoxin [Mycobacterium gilvum PYR-GCK]
gi|145214066|gb|ABP43470.1| thioredoxin [Mycobacterium gilvum PYR-GCK]
Length=124
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/104 (46%), Positives = 70/104 (68%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T++LT F+ TI+ NS VLV FWA C PC F P YE SS H +VVH KV+ + E
Sbjct 1 MATKNLTYDDFESTITGNSIVLVDFWASWCGPCRAFGPVYERSSEAHPEVVHAKVDTQHE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+DLA+ + +PT+MAF+ G LV++QAG PA +++L+ +++
Sbjct 61 RDLAATLEITSIPTVMAFRDGVLVYRQAGAMPPAALEDLIGRVK 104
>gi|118617140|ref|YP_905472.1| thioredoxin TrxB1 [Mycobacterium ulcerans Agy99]
gi|118569250|gb|ABL04001.1| thioredoxin TrxB1 [Mycobacterium ulcerans Agy99]
Length=109
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/106 (51%), Positives = 76/106 (72%), Gaps = 0/106 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+DLTAA F +T++ N VLV FWA C PC PT++ASS H DVV+ KV+ E E
Sbjct 1 MATQDLTAAKFSETVNDNDMVLVDFWASWCGPCRALAPTFQASSEAHPDVVYAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAY 106
++LA+ A ++ +PTLM+FKKGKL+F Q G A +++LVQQL++Y
Sbjct 61 QELAAAAQIRSIPTLMSFKKGKLLFNQPGALPAAALEDLVQQLKSY 106
>gi|126438252|ref|YP_001073943.1| thioredoxin [Mycobacterium sp. JLS]
gi|126238052|gb|ABO01453.1| thioredoxin [Mycobacterium sp. JLS]
Length=124
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/105 (44%), Positives = 71/105 (68%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
++T+ LT F+ T++ N VLV FWA C PC F P +E SS+ H DVVH KV+ + E
Sbjct 1 MSTKTLTYDNFEATVTGNPIVLVDFWASWCGPCRAFAPVFERSSQTHPDVVHAKVDTQAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+DLA+ + +PT+MAF+ G LV++QAG PA +++L+ +++A
Sbjct 61 RDLAATLEISSIPTVMAFRDGVLVYRQAGALPPAALEDLITRVKA 105
>gi|183982651|ref|YP_001850942.1| thioredoxin TrxB1_1 [Mycobacterium marinum M]
gi|183175977|gb|ACC41087.1| thioredoxin TrxB1_1 [Mycobacterium marinum M]
Length=124
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/95 (48%), Positives = 67/95 (71%), Gaps = 0/95 (0%)
Query 11 FQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETEKDLASIAGVK 70
F+ T++ NS VLV FWA C PC F PTYE S++ H DVVH KV+ + E +LA+ AGV+
Sbjct 11 FESTVTDNSLVLVDFWASYCRPCHAFAPTYERSAQAHPDVVHAKVDTQAEPELAAAAGVR 70
Query 71 LLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+PT+MAF+ G LV+ Q G A++++L+ Q+++
Sbjct 71 SIPTVMAFRDGVLVYNQPGAMPSAVLEDLIGQMKS 105
>gi|289706462|ref|ZP_06502816.1| thioredoxin [Micrococcus luteus SK58]
gi|289556781|gb|EFD50118.1| thioredoxin [Micrococcus luteus SK58]
Length=146
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/104 (47%), Positives = 67/104 (65%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+DLT F T++ N VLV FWA C PC F P +EA+S KH DVV KV+ E +
Sbjct 1 MATQDLTLEEFGSTVAENDTVLVDFWAGWCGPCRQFAPVFEAASEKHDDVVFAKVDTEDQ 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ LA++AG+ +PTLMAF+ G LVF QAG ++ L+ Q++
Sbjct 61 QQLAAMAGITSIPTLMAFRGGVLVFSQAGALPGTALEQLLDQVK 104
>gi|310286936|ref|YP_003938194.1| thioredoxin [Bifidobacterium bifidum S17]
gi|309250872|gb|ADO52620.1| thioredoxin [Bifidobacterium bifidum S17]
Length=120
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/105 (46%), Positives = 72/105 (69%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T L A F++TI+ N+ V V FWA C PC F PT+EA+S ++ D+V GKV+I+
Sbjct 1 MATVQLNAQDFEKTITDNNLVFVDFWATWCGPCRAFGPTFEAASEENPDIVFGKVDIDAS 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+DLAS AG++ +PTLM K+G+++FKQAG +D+L+ Q +A
Sbjct 61 QDLASAAGIQAVPTLMIAKQGQIIFKQAGALRAEDLDDLIAQAKA 105
>gi|311063815|ref|YP_003970540.1| thioredoxin [Bifidobacterium bifidum PRL2010]
gi|310866134|gb|ADP35503.1| Thioredoxin [Bifidobacterium bifidum PRL2010]
Length=120
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/105 (46%), Positives = 72/105 (69%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T L A F++TI+ N+ V V FWA C PC F PT+EA+S ++ D+V GKV+I+
Sbjct 1 MATVQLNAQDFEKTITDNNLVFVDFWATWCGPCRAFGPTFEAASEENPDIVFGKVDIDAN 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+DLAS AG++ +PTLM K+G+++FKQAG +D+L+ Q +A
Sbjct 61 QDLASAAGIQAVPTLMIAKQGQIIFKQAGALRAEDLDDLIAQAKA 105
>gi|313139624|ref|ZP_07801817.1| thiol-disulfide isomerase and thioredoxins [Bifidobacterium bifidum
NCIMB 41171]
gi|313132134|gb|EFR49751.1| thiol-disulfide isomerase and thioredoxins [Bifidobacterium bifidum
NCIMB 41171]
Length=128
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/105 (46%), Positives = 71/105 (68%), Gaps = 0/105 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T L A F++TI+ N+ V V FWA C PC F PT+EA+S + D+V GKV+I+
Sbjct 9 MATVQLNAQDFEKTITDNNLVFVDFWATWCGPCRAFGPTFEAASEANPDIVFGKVDIDAN 68
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRA 105
+DLAS AG++ +PTLM K+G+++FKQAG +D+L+ Q +A
Sbjct 69 QDLASAAGIQAVPTLMIAKQGQIIFKQAGALRAEDLDDLIAQAKA 113
>gi|326382218|ref|ZP_08203910.1| thioredoxin [Gordonia neofelifaecis NRRL B-59395]
gi|326198948|gb|EGD56130.1| thioredoxin [Gordonia neofelifaecis NRRL B-59395]
Length=118
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/114 (47%), Positives = 75/114 (66%), Gaps = 0/114 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T DL+ F+QTI N VLV FWA C PC F PTY+A+S KH D+V GKV+ E E
Sbjct 1 MATIDLSGDDFEQTIVDNDIVLVDFWADWCGPCKQFAPTYKAASEKHGDIVFGKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLRAYTFKSPAGE 114
+ LA+ A ++ +PT+MAFK+G+LVF +AG P +D+L+ Q++A + E
Sbjct 61 QQLAAAASIRSIPTIMAFKQGRLVFNEAGALPPQALDSLIDQVKALDVEQALKE 114
>gi|145224254|ref|YP_001134932.1| thioredoxin [Mycobacterium gilvum PYR-GCK]
gi|315444589|ref|YP_004077468.1| thioredoxin [Mycobacterium sp. Spyr1]
gi|145216740|gb|ABP46144.1| thioredoxin [Mycobacterium gilvum PYR-GCK]
gi|315262892|gb|ADT99633.1| thioredoxin [Mycobacterium sp. Spyr1]
Length=120
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (70%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T+D+TA F++TI N VLV FWA C PC F PT+ ASS KH D+V+ KV+ E E
Sbjct 1 MATKDITAEEFEKTIKDNDIVLVDFWASWCGPCKAFAPTFAASSEKHPDIVYAKVDTEAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
+ LA+ A ++ +PTLMAFKKG V +AG PA +++L+QQ+R
Sbjct 61 QQLAAAADIRAIPTLMAFKKGTPVLNRAGALPPAALEDLIQQIR 104
>gi|309812561|ref|ZP_07706308.1| thioredoxin [Dermacoccus sp. Ellin185]
gi|308433490|gb|EFP57375.1| thioredoxin [Dermacoccus sp. Ellin185]
Length=151
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/104 (44%), Positives = 69/104 (67%), Gaps = 0/104 (0%)
Query 1 VTTRDLTAAYFQQTISANSNVLVYFWAPLCAPCDLFTPTYEASSRKHFDVVHGKVNIETE 60
+ T +LT F +TI N VLV FWA C PC F P +EA+S KH D+V KV+ + E
Sbjct 1 MATIELTGEKFTETIENNGIVLVDFWAAWCGPCRQFAPVFEAASEKHDDIVFAKVDTDAE 60
Query 61 KDLASIAGVKLLPTLMAFKKGKLVFKQAGIANPAIMDNLVQQLR 104
++LA+ A ++ +PTLMAF+ G +VF +G+ A +++L++Q+R
Sbjct 61 QELAAAANIQSIPTLMAFRDGLMVFSNSGVLPAAAVEDLIRQIR 104
Lambda K H
0.319 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130872486112
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40