BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1471 Length=123 Score E Sequences producing significant alignments: (Bits) Value gi|15840931|ref|NP_335968.1| thioredoxin [Mycobacterium tubercul... 253 6e-66 gi|126435065|ref|YP_001070756.1| thioredoxin [Mycobacterium sp. ... 180 5e-44 gi|108799411|ref|YP_639608.1| thioredoxin [Mycobacterium sp. MCS... 179 1e-43 gi|120403724|ref|YP_953553.1| thioredoxin [Mycobacterium vanbaal... 174 3e-42 gi|240172214|ref|ZP_04750873.1| thioredoxin TrxB1 [Mycobacterium... 173 9e-42 gi|254819540|ref|ZP_05224541.1| thioredoxin [Mycobacterium intra... 172 2e-41 gi|342858761|ref|ZP_08715416.1| thioredoxin [Mycobacterium colom... 172 2e-41 gi|296170670|ref|ZP_06852245.1| thioredoxin [Mycobacterium paras... 171 4e-41 gi|41407294|ref|NP_960130.1| hypothetical protein MAP1196 [Mycob... 169 1e-40 gi|325674215|ref|ZP_08153904.1| thioredoxin [Rhodococcus equi AT... 167 6e-40 gi|183982290|ref|YP_001850581.1| thioredoxin TrxB1 [Mycobacteriu... 166 8e-40 gi|118472572|ref|YP_887453.1| thioredoxin [Mycobacterium smegmat... 166 8e-40 gi|336458023|gb|EGO37010.1| thioredoxin [Mycobacterium avium sub... 166 9e-40 gi|312139905|ref|YP_004007241.1| thioredoxin [Rhodococcus equi 1... 166 1e-39 gi|169629823|ref|YP_001703472.1| thioredoxin TrxB [Mycobacterium... 166 1e-39 gi|226360132|ref|YP_002777910.1| thioredoxin [Rhodococcus opacus... 163 7e-39 gi|226306808|ref|YP_002766768.1| thioredoxin [Rhodococcus erythr... 163 9e-39 gi|118617140|ref|YP_905472.1| thioredoxin TrxB1 [Mycobacterium u... 163 1e-38 gi|229492771|ref|ZP_04386572.1| thioredoxin [Rhodococcus erythro... 162 2e-38 gi|111018003|ref|YP_700975.1| thioredoxin [Rhodococcus jostii RH... 162 2e-38 gi|296140196|ref|YP_003647439.1| thioredoxin [Tsukamurella pauro... 159 1e-37 gi|111027061|ref|YP_709039.1| thioredoxin [Rhodococcus jostii RH... 158 3e-37 gi|333919154|ref|YP_004492735.1| thioredoxin [Amycolicicoccus su... 157 7e-37 gi|145224254|ref|YP_001134932.1| thioredoxin [Mycobacterium gilv... 156 8e-37 gi|111025660|ref|YP_708080.1| thioredoxin [Rhodococcus jostii RH... 153 7e-36 gi|126438252|ref|YP_001073943.1| thioredoxin [Mycobacterium sp. ... 151 3e-35 gi|226366596|ref|YP_002784379.1| thioredoxin [Rhodococcus opacus... 150 7e-35 gi|333990884|ref|YP_004523498.1| thioredoxin TrxB1 [Mycobacteriu... 150 8e-35 gi|108802270|ref|YP_642467.1| thioredoxin [Mycobacterium sp. MCS... 149 1e-34 gi|296170322|ref|ZP_06851913.1| thioredoxin [Mycobacterium paras... 149 2e-34 gi|315446685|ref|YP_004079564.1| thioredoxin [Mycobacterium sp. ... 148 3e-34 gi|145221580|ref|YP_001132258.1| thioredoxin [Mycobacterium gilv... 145 1e-33 gi|240171243|ref|ZP_04749902.1| thioredoxin TrxB1_1 [Mycobacteri... 145 2e-33 gi|15827974|ref|NP_302237.1| thioredoxin [Mycobacterium leprae T... 145 2e-33 gi|281415194|ref|ZP_06246936.1| thioredoxin [Micrococcus luteus ... 143 8e-33 gi|120404975|ref|YP_954804.1| thioredoxin [Mycobacterium vanbaal... 143 8e-33 gi|120402831|ref|YP_952660.1| thioredoxin [Mycobacterium vanbaal... 142 1e-32 gi|54023846|ref|YP_118088.1| putative thioredoxin [Nocardia farc... 142 1e-32 gi|239918591|ref|YP_002958149.1| thioredoxin [Micrococcus luteus... 142 2e-32 gi|326382218|ref|ZP_08203910.1| thioredoxin [Gordonia neofelifae... 141 3e-32 gi|296129178|ref|YP_003636428.1| thioredoxin [Cellulomonas flavi... 141 3e-32 gi|309812561|ref|ZP_07706308.1| thioredoxin [Dermacoccus sp. Ell... 141 4e-32 gi|336321327|ref|YP_004601295.1| thioredoxin [Cellvibrio gilvus ... 140 5e-32 gi|289706462|ref|ZP_06502816.1| thioredoxin [Micrococcus luteus ... 140 5e-32 gi|338532096|ref|YP_004665430.1| thioredoxin [Myxococcus fulvus ... 140 6e-32 gi|302559635|ref|ZP_07311977.1| thioredoxin [Streptomyces griseo... 140 7e-32 gi|183982651|ref|YP_001850942.1| thioredoxin TrxB1_1 [Mycobacter... 140 9e-32 gi|108762614|ref|YP_634965.1| thioredoxin [Myxococcus xanthus DK... 139 1e-31 gi|38234819|ref|NP_940586.1| putative thioredoxin [Corynebacteri... 139 1e-31 gi|220910988|ref|YP_002486297.1| thioredoxin [Arthrobacter chlor... 137 5e-31 >gi|15840931|ref|NP_335968.1| thioredoxin [Mycobacterium tuberculosis CDC1551] gi|31792665|ref|NP_855158.1| thioredoxin TRXB1 [Mycobacterium bovis AF2122/97] gi|57116870|ref|YP_177815.1| thioredoxin TRXB1 [Mycobacterium tuberculosis H37Rv] 77 more sequence titles Length=123 Score = 253 bits (646), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 122/123 (99%), Positives = 123/123 (100%), Gaps = 0/123 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE Sbjct 1 MTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA 120 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA Sbjct 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA 120 Query 121 QQA 123 QQA Sbjct 121 QQA 123 >gi|126435065|ref|YP_001070756.1| thioredoxin [Mycobacterium sp. JLS] gi|126234865|gb|ABN98265.1| thioredoxin [Mycobacterium sp. JLS] Length=121 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 90/121 (75%), Positives = 108/121 (90%), Gaps = 0/121 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TTRDLTA QFNETI +++VLVD+WASWCGPCRAFAPTFA SSEKHPDVVHAKVDTEAE Sbjct 1 MTTRDLTADQFNETITDNEIVLVDFWASWCGPCRAFAPTFAASSEKHPDVVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA 120 ++LAAAA IRSIPT+MAFK GKL+FNQAGALPPAALE LVQQ+K ++++A A +N ++ Sbjct 61 QQLAAAADIRSIPTLMAFKKGKLVFNQAGALPPAALEDLVQQVKEFDIDAAMAQQENAQS 120 Query 121 Q 121 + Sbjct 121 E 121 >gi|108799411|ref|YP_639608.1| thioredoxin [Mycobacterium sp. MCS] gi|119868524|ref|YP_938476.1| thioredoxin [Mycobacterium sp. KMS] gi|108769830|gb|ABG08552.1| thioredoxin [Mycobacterium sp. MCS] gi|119694613|gb|ABL91686.1| thioredoxin [Mycobacterium sp. KMS] Length=121 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 89/121 (74%), Positives = 108/121 (90%), Gaps = 0/121 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TTRDLTA QFNETI +++VLVD+WASWCGPCRAFAPTFA SSEKHPDVVHAKVDTEAE Sbjct 1 MTTRDLTADQFNETITDNEIVLVDFWASWCGPCRAFAPTFAASSEKHPDVVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA 120 ++LAAAA IRSIPT+MAFK GKL+FNQAGALPPAALE LVQ++K ++++A A +N ++ Sbjct 61 QQLAAAADIRSIPTLMAFKKGKLVFNQAGALPPAALEDLVQKVKEFDIDAAMAQQENAQS 120 Query 121 Q 121 + Sbjct 121 E 121 >gi|120403724|ref|YP_953553.1| thioredoxin [Mycobacterium vanbaalenii PYR-1] gi|119956542|gb|ABM13547.1| thioredoxin [Mycobacterium vanbaalenii PYR-1] Length=120 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 85/120 (71%), Positives = 105/120 (88%), Gaps = 0/120 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + TRD+TA +FN+TI +D+VLVD+WASWCGPC+AFAPTFA SSEKHPDVV+AKVDTEAE Sbjct 1 MATRDITAQEFNDTINDNDIVLVDFWASWCGPCKAFAPTFAASSEKHPDVVYAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA 120 ++LAAAA IRSIPT+MAFK GKL+FNQAGALPPAALE L+QQ+K ++++A A NG+ Sbjct 61 QQLAAAADIRSIPTLMAFKKGKLVFNQAGALPPAALEDLIQQVKDFDIDAAIAAQDNGQG 120 >gi|240172214|ref|ZP_04750873.1| thioredoxin TrxB1 [Mycobacterium kansasii ATCC 12478] Length=109 Score = 173 bits (438), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 88/108 (82%), Positives = 99/108 (92%), Gaps = 0/108 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T+DLTAAQFNET+ +DMVLVD+WASWCGPCR+FAPTF SSEKHPDVV+AKV+TE E Sbjct 1 MATKDLTAAQFNETVNDNDMVLVDFWASWCGPCRSFAPTFQASSEKHPDVVYAKVNTEEE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 +ELAAAAQIRSIPT+MAFK G+LLFNQ GALPPAALE LVQQLKAYEV Sbjct 61 QELAAAAQIRSIPTLMAFKKGQLLFNQPGALPPAALEDLVQQLKAYEV 108 >gi|254819540|ref|ZP_05224541.1| thioredoxin [Mycobacterium intracellulare ATCC 13950] Length=117 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/113 (77%), Positives = 102/113 (91%), Gaps = 0/113 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TT DLTA +FNETI+ +D+VLVD+WASWCGPCR F PTF SSEKHPD+VHAKVDTEAE Sbjct 1 MTTLDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASSEKHPDIVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEA 113 ++LAAAAQIRSIPT+MAFK GKLLFNQ GALPPAALE LVQQ++A++V+A EA Sbjct 61 QQLAAAAQIRSIPTLMAFKKGKLLFNQPGALPPAALEDLVQQVRAFDVDAAEA 113 >gi|342858761|ref|ZP_08715416.1| thioredoxin [Mycobacterium colombiense CECT 3035] gi|342134465|gb|EGT87645.1| thioredoxin [Mycobacterium colombiense CECT 3035] Length=117 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/121 (74%), Positives = 106/121 (88%), Gaps = 4/121 (3%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TT DLTA +FNETI+ +D+VLVD+WASWCGPCR F PTF S+EKHPD+VHAKVDTEAE Sbjct 1 MTTLDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASAEKHPDIVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA 120 ++LAAAAQIRSIPT+MAFK GKLLFNQ GALPPAALE LVQQ++A++V+A EA GRA Sbjct 61 QQLAAAAQIRSIPTLMAFKKGKLLFNQPGALPPAALEDLVQQVRAFDVDAAEA----GRA 116 Query 121 Q 121 + Sbjct 117 E 117 >gi|296170670|ref|ZP_06852245.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894659|gb|EFG74393.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length=117 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 86/110 (79%), Positives = 100/110 (91%), Gaps = 0/110 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TT DLTA +FNETI+ +D+VLVD+WASWCGPCR F PTF SSEKHPD+VHAKVDTEAE Sbjct 1 MTTLDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASSEKHPDIVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEA 110 ++LAAAAQIRSIPT+MAFK GKLLFNQ GALPPAALE LVQQ+KA++V+A Sbjct 61 QQLAAAAQIRSIPTLMAFKKGKLLFNQPGALPPAALEDLVQQVKAFDVDA 110 >gi|41407294|ref|NP_960130.1| hypothetical protein MAP1196 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464906|ref|YP_882490.1| thioredoxin [Mycobacterium avium 104] gi|254775753|ref|ZP_05217269.1| thioredoxin [Mycobacterium avium subsp. avium ATCC 25291] gi|41395646|gb|AAS03513.1| TrxB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166193|gb|ABK67090.1| thioredoxin [Mycobacterium avium 104] Length=117 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/110 (78%), Positives = 100/110 (91%), Gaps = 0/110 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TT DLTA +FNETI+ +D+VLVD+WASWCGPCR F PTF SSEKHPD+VHAKVDTEAE Sbjct 1 MTTVDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASSEKHPDIVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEA 110 ++LAAAAQIRSIPT+MAFK GKLLFNQ GALPPAALE LVQQ++A++V+A Sbjct 61 QQLAAAAQIRSIPTLMAFKKGKLLFNQPGALPPAALEDLVQQVRAFDVDA 110 >gi|325674215|ref|ZP_08153904.1| thioredoxin [Rhodococcus equi ATCC 33707] gi|325554895|gb|EGD24568.1| thioredoxin [Rhodococcus equi ATCC 33707] Length=130 Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 78/121 (65%), Positives = 95/121 (79%), Gaps = 2/121 (1%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 V T+ LT F +T++ +D+VLVD+WASWCGPCR FAPTF SSEKHPDVVH K+DTEAE Sbjct 10 VATQTLTQQNFKQTVEDNDIVLVDFWASWCGPCRNFAPTFDASSEKHPDVVHGKMDTEAE 69 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEA--GEATTQNG 118 +E AA A IRSIPTIMAF+ G L+FNQAGALPPAALE L+ Q+KA +++A E +Q G Sbjct 70 QEFAAGAGIRSIPTIMAFREGVLVFNQAGALPPAALEDLITQVKALDMDAVRAEIASQTG 129 Query 119 R 119 Sbjct 130 N 130 >gi|183982290|ref|YP_001850581.1| thioredoxin TrxB1 [Mycobacterium marinum M] gi|183175616|gb|ACC40726.1| thioredoxin TrxB1 [Mycobacterium marinum M] Length=112 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 87/108 (81%), Positives = 98/108 (91%), Gaps = 0/108 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T+DLTAA+F+ET+ +DMVLVD+WASWCGPCRAFAPTF SSE HPDVV+AKVDTEAE Sbjct 4 MATQDLTAAKFSETVNDNDMVLVDFWASWCGPCRAFAPTFQASSEAHPDVVYAKVDTEAE 63 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 +ELAAAAQIRSIPT+MAFK GKLLFNQ GALP AALE LVQQLK+YEV Sbjct 64 QELAAAAQIRSIPTLMAFKKGKLLFNQPGALPAAALEDLVQQLKSYEV 111 >gi|118472572|ref|YP_887453.1| thioredoxin [Mycobacterium smegmatis str. MC2 155] gi|118173859|gb|ABK74755.1| thioredoxin [Mycobacterium smegmatis str. MC2 155] Length=124 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 83/120 (70%), Positives = 103/120 (86%), Gaps = 2/120 (1%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 ++T D+TA QFN+T+ +++VLVD+WASWCGPC+AFAPTFA S+EKHPDVVHAKVDTEAE Sbjct 1 MSTLDITAEQFNDTVNDNEIVLVDFWASWCGPCKAFAPTFAASAEKHPDVVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAG--EATTQNG 118 + LAAAA IRSIPT+MAFK GKL+FNQAGALPPAALE LVQ++K ++++A E Q G Sbjct 61 QALAAAADIRSIPTLMAFKKGKLVFNQAGALPPAALEDLVQKIKEFDIDAAMREQAAQGG 120 >gi|336458023|gb|EGO37010.1| thioredoxin [Mycobacterium avium subsp. paratuberculosis S397] Length=117 Score = 166 bits (421), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 84/110 (77%), Positives = 99/110 (90%), Gaps = 0/110 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TT DLTA +FNETI+ +D+VLVD+WASWCGPCR F PTF SSEKHPD+VHAKVDTEAE Sbjct 1 MTTVDLTAEKFNETIEGNDIVLVDFWASWCGPCRQFGPTFQASSEKHPDIVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEA 110 ++LAAAAQIRSIPT+ AFK GKLLFNQ GALPPAALE LVQQ++A++V+A Sbjct 61 QQLAAAAQIRSIPTLTAFKKGKLLFNQPGALPPAALEDLVQQVRAFDVDA 110 >gi|312139905|ref|YP_004007241.1| thioredoxin [Rhodococcus equi 103S] gi|311889244|emb|CBH48558.1| putative thioredoxin [Rhodococcus equi 103S] Length=121 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 77/121 (64%), Positives = 95/121 (79%), Gaps = 2/121 (1%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T+ LT F +T++ +D+VLVD+WASWCGPCR FAPTF SSEKHPDVVH K+DTEAE Sbjct 1 MATQTLTQQNFKQTVEDNDIVLVDFWASWCGPCRNFAPTFDASSEKHPDVVHGKMDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEA--GEATTQNG 118 +E AA A IRSIPTIMAF+ G L+FNQAGALPPAALE L+ Q+KA +++A E +Q G Sbjct 61 QEFAAGAGIRSIPTIMAFREGVLVFNQAGALPPAALEDLITQVKALDMDAVRAEIASQTG 120 Query 119 R 119 Sbjct 121 N 121 >gi|169629823|ref|YP_001703472.1| thioredoxin TrxB [Mycobacterium abscessus ATCC 19977] gi|169241790|emb|CAM62818.1| Probable thioredoxin TrxB [Mycobacterium abscessus] Length=117 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 75/111 (68%), Positives = 91/111 (82%), Gaps = 0/111 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + TRD+TA FN+ I +D+VLVD+WASWCGPCR F P F SSE +PDVVHAKVDTEAE Sbjct 1 MATRDITADAFNDLIHDNDIVLVDFWASWCGPCRQFGPVFEASSEANPDVVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAG 111 + LA+AA IRSIPT+MAFK G+L+FNQAGALPPA+L LVQQ++ +VEA Sbjct 61 QALASAANIRSIPTLMAFKQGQLVFNQAGALPPASLADLVQQVRDLDVEAA 111 >gi|226360132|ref|YP_002777910.1| thioredoxin [Rhodococcus opacus B4] gi|226238617|dbj|BAH48965.1| thioredoxin [Rhodococcus opacus B4] Length=122 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 74/107 (70%), Positives = 91/107 (86%), Gaps = 0/107 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T+ LT F+ET+ +D+VLVD+WASWCGPCR+FAPTF SSE+HPDVVHAKVDTEAE+ Sbjct 3 TKTLTQQNFDETVTGNDVVLVDFWASWCGPCRSFAPTFEASSEQHPDVVHAKVDTEAEQG 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 +AAAA IRSIPTIMAF+ G L+F+Q GALPPAALE LV Q+KA +++ Sbjct 63 IAAAANIRSIPTIMAFREGVLVFSQPGALPPAALEDLVTQVKALDMD 109 >gi|226306808|ref|YP_002766768.1| thioredoxin [Rhodococcus erythropolis PR4] gi|226185925|dbj|BAH34029.1| thioredoxin [Rhodococcus erythropolis PR4] Length=128 Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 77/109 (71%), Positives = 89/109 (82%), Gaps = 0/109 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 V T+ LT F+ETI SD+VLVD+WASWCGPCR FAPTF SSEKH DVVHAKVDTEAE Sbjct 6 VATQTLTQQNFDETINGSDVVLVDFWASWCGPCRQFAPTFEASSEKHADVVHAKVDTEAE 65 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 + +AAAA IRSIPTIMAF+ G L+FNQAGALP A LE LV Q+KA +++ Sbjct 66 QGIAAAANIRSIPTIMAFREGVLVFNQAGALPAAQLEELVTQVKALDMD 114 >gi|118617140|ref|YP_905472.1| thioredoxin TrxB1 [Mycobacterium ulcerans Agy99] gi|118569250|gb|ABL04001.1| thioredoxin TrxB1 [Mycobacterium ulcerans Agy99] Length=109 Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 85/108 (79%), Positives = 97/108 (90%), Gaps = 0/108 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T+DLTAA+F+ET+ +DMVLVD+WASWCGPCRA APTF SSE HPDVV+AKVDTEAE Sbjct 1 MATQDLTAAKFSETVNDNDMVLVDFWASWCGPCRALAPTFQASSEAHPDVVYAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 +ELAAAAQIRSIPT+M+FK GKLLFNQ GALP AALE LVQQLK+YEV Sbjct 61 QELAAAAQIRSIPTLMSFKKGKLLFNQPGALPAAALEDLVQQLKSYEV 108 >gi|229492771|ref|ZP_04386572.1| thioredoxin [Rhodococcus erythropolis SK121] gi|229320430|gb|EEN86250.1| thioredoxin [Rhodococcus erythropolis SK121] Length=123 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 76/107 (72%), Positives = 88/107 (83%), Gaps = 0/107 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T+ LT F+ETI SD+VLVD+WASWCGPCR FAPTF SSEKH DVVHAKVDTEAE+ Sbjct 3 TQTLTQQNFDETINGSDVVLVDFWASWCGPCRQFAPTFEASSEKHADVVHAKVDTEAEQG 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 +AAAA IRSIPTIMAF+ G L+FNQAGALP A LE LV Q+KA +++ Sbjct 63 IAAAANIRSIPTIMAFREGVLVFNQAGALPAAQLEELVTQVKALDMD 109 >gi|111018003|ref|YP_700975.1| thioredoxin [Rhodococcus jostii RHA1] gi|110817533|gb|ABG92817.1| thioredoxin [Rhodococcus jostii RHA1] Length=122 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 73/109 (67%), Positives = 92/109 (85%), Gaps = 0/109 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T+ LT F+ET+ +D+VLVD+WASWCGPCR+FAPTF SSE+HPDVVHAKVDTEAE Sbjct 1 MATKTLTQQNFDETVTGNDVVLVDFWASWCGPCRSFAPTFEASSEQHPDVVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 + +AAAA IRSIPTIMAF+ G L+F+Q GALPPAALE L+ Q+KA +++ Sbjct 61 QGIAAAANIRSIPTIMAFREGVLVFSQPGALPPAALEDLLTQVKALDMD 109 >gi|296140196|ref|YP_003647439.1| thioredoxin [Tsukamurella paurometabola DSM 20162] gi|296028330|gb|ADG79100.1| thioredoxin [Tsukamurella paurometabola DSM 20162] Length=122 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 71/112 (64%), Positives = 92/112 (83%), Gaps = 0/112 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T +LTA +F++T+ +D+VLVD+WASWCGPCRAFAPTF ++S+ HPDVV AKVDTEAE Sbjct 1 MATTELTAEKFDQTVTGNDIVLVDFWASWCGPCRAFAPTFEKASDAHPDVVFAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGE 112 + LAAAA IRSIPT+M FK G L++N+AGALPPAALE L+ Q K ++E + Sbjct 61 QGLAAAANIRSIPTLMVFKKGNLVYNEAGALPPAALEDLIAQAKELDIEPAD 112 >gi|111027061|ref|YP_709039.1| thioredoxin [Rhodococcus jostii RHA1] gi|110825600|gb|ABH00881.1| probable thioredoxin [Rhodococcus jostii RHA1] Length=125 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 71/114 (63%), Positives = 93/114 (82%), Gaps = 0/114 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TT++LT F TI + +VLVD+WASWCGPCRAFAPTF +SS +HPDVVHAKV+TEAE Sbjct 1 MTTKNLTHTDFASTIADNAIVLVDFWASWCGPCRAFAPTFEQSSRRHPDVVHAKVNTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEAT 114 +++A+AA IRSIPTIMAF++G L+++Q GALPPAALE L+ Q+K ++ A T Sbjct 61 QQIASAADIRSIPTIMAFRDGVLVYSQPGALPPAALEELISQIKELDMAAVHDT 114 >gi|333919154|ref|YP_004492735.1| thioredoxin [Amycolicicoccus subflavus DQS3-9A1] gi|333481375|gb|AEF39935.1| Thioredoxin [Amycolicicoccus subflavus DQS3-9A1] Length=126 Score = 157 bits (396), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 78/126 (62%), Positives = 94/126 (75%), Gaps = 3/126 (2%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T++LT A F TI S+D+VLVD+WA WCGPC+ FAPTF SS KHPDVVHAKVDTEAE Sbjct 1 MATQNLTHADFESTITSNDVVLVDFWAEWCGPCKQFAPTFEASSSKHPDVVHAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATT---QN 117 + LAAAA I+SIPT+MAF+ G L+F Q GALPP ALESL+ Q+K ++E A Q Sbjct 61 QSLAAAAGIQSIPTVMAFREGILVFAQPGALPPDALESLITQVKDLDMEDVRAQITEQQE 120 Query 118 GRAQQA 123 AQQA Sbjct 121 NGAQQA 126 >gi|145224254|ref|YP_001134932.1| thioredoxin [Mycobacterium gilvum PYR-GCK] gi|315444589|ref|YP_004077468.1| thioredoxin [Mycobacterium sp. Spyr1] gi|145216740|gb|ABP46144.1| thioredoxin [Mycobacterium gilvum PYR-GCK] gi|315262892|gb|ADT99633.1| thioredoxin [Mycobacterium sp. Spyr1] Length=120 Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 76/120 (64%), Positives = 103/120 (86%), Gaps = 0/120 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T+D+TA +F +TI+ +D+VLVD+WASWCGPC+AFAPTFA SSEKHPD+V+AKVDTEAE Sbjct 1 MATKDITAEEFEKTIKDNDIVLVDFWASWCGPCKAFAPTFAASSEKHPDIVYAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA 120 ++LAAAA IR+IPT+MAFK G + N+AGALPPAALE L+QQ++ +V+A A ++G++ Sbjct 61 QQLAAAADIRAIPTLMAFKKGTPVLNRAGALPPAALEDLIQQIRDLDVDAAIAAQEDGQS 120 >gi|111025660|ref|YP_708080.1| thioredoxin [Rhodococcus jostii RHA1] gi|110824639|gb|ABG99922.1| probable thioredoxin [Rhodococcus jostii RHA1] Length=123 Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 69/106 (66%), Positives = 86/106 (82%), Gaps = 0/106 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T+ LT F++ + S+D+V+VD+WASWCGPCRAFAPTF SS+KHPDVV AKVDTEAE Sbjct 3 TQSLTQRTFDDVVASNDVVIVDFWASWCGPCRAFAPTFEASSDKHPDVVFAKVDTEAEPG 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 LAAAA IRSIPT+MA++ G L+FNQAG LPP AL+ LV Q+K ++ Sbjct 63 LAAAANIRSIPTVMAYREGVLVFNQAGMLPPEALDDLVAQVKGLDM 108 >gi|126438252|ref|YP_001073943.1| thioredoxin [Mycobacterium sp. JLS] gi|126238052|gb|ABO01453.1| thioredoxin [Mycobacterium sp. JLS] Length=124 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 66/108 (62%), Positives = 87/108 (81%), Gaps = 0/108 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 ++T+ LT F T+ + +VLVD+WASWCGPCRAFAP F SS+ HPDVVHAKVDT+AE Sbjct 1 MSTKTLTYDNFEATVTGNPIVLVDFWASWCGPCRAFAPVFERSSQTHPDVVHAKVDTQAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 R+LAA +I SIPT+MAF++G L++ QAGALPPAALE L+ ++KA ++ Sbjct 61 RDLAATLEISSIPTVMAFRDGVLVYRQAGALPPAALEDLITRVKALDM 108 >gi|226366596|ref|YP_002784379.1| thioredoxin [Rhodococcus opacus B4] gi|226245086|dbj|BAH55434.1| thioredoxin [Rhodococcus opacus B4] Length=123 Score = 150 bits (379), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 68/107 (64%), Positives = 85/107 (80%), Gaps = 0/107 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T+ LT F+E + D+VLVD+WASWCGPCRAFAPTF SS+KH DVV AKVDTEAE+ Sbjct 3 TQSLTQHTFDEVVAGHDLVLVDFWASWCGPCRAFAPTFEASSDKHTDVVFAKVDTEAEQG 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 LAAAA IRSIPT+MAF+ G L+F+QAG LPP AL+ LV ++K +++ Sbjct 63 LAAAANIRSIPTVMAFREGLLVFSQAGVLPPEALDELVTKVKGLDMD 109 >gi|333990884|ref|YP_004523498.1| thioredoxin TrxB1 [Mycobacterium sp. JDM601] gi|333486852|gb|AEF36244.1| thioredoxin TrxB1 [Mycobacterium sp. JDM601] Length=119 Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 78/103 (76%), Positives = 91/103 (89%), Gaps = 0/103 (0%) Query 6 LTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERELAA 65 +TAA+F ETI +D+VLVD+WASWCGPC+AFAPTF +SE HPDVV AKVDTEAE++LAA Sbjct 1 MTAAKFEETIADNDIVLVDFWASWCGPCKAFAPTFESASENHPDVVFAKVDTEAEQQLAA 60 Query 66 AAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 AAQIRSIPT+MAFK G L+FNQAGALPPAALE LVQQ+K +V Sbjct 61 AAQIRSIPTLMAFKKGTLVFNQAGALPPAALEHLVQQVKDLDV 103 >gi|108802270|ref|YP_642467.1| thioredoxin [Mycobacterium sp. MCS] gi|119871423|ref|YP_941375.1| thioredoxin [Mycobacterium sp. KMS] gi|108772689|gb|ABG11411.1| thioredoxin [Mycobacterium sp. MCS] gi|119697512|gb|ABL94585.1| thioredoxin [Mycobacterium sp. KMS] Length=124 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 65/108 (61%), Positives = 86/108 (80%), Gaps = 0/108 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 ++T+ LT F T+ + +VLVD+WA WCGPCRAFAP F SS+ HPDVVHAKVDT+AE Sbjct 1 MSTKTLTYDNFEATVTGNPIVLVDFWAPWCGPCRAFAPVFERSSQTHPDVVHAKVDTQAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 R+LAA +I SIPT+MAF++G L++ QAGALPPAALE L+ ++KA ++ Sbjct 61 RDLAATLEISSIPTVMAFRDGVLVYRQAGALPPAALEDLITRVKALDM 108 >gi|296170322|ref|ZP_06851913.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895045|gb|EFG74764.1| thioredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length=124 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 66/120 (55%), Positives = 88/120 (74%), Gaps = 0/120 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +T + LTAA F TI +S +VLVD+WA WCGPCRAFAPTF S++ HPD+V+AKVDT+AE Sbjct 1 MTVKSLTAADFESTILTSPIVLVDFWAPWCGPCRAFAPTFERSAQNHPDIVYAKVDTDAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA 120 ELA IRS+PTIMAF++G L+++Q GA+ PA LE L+ Q+K ++E A +A Sbjct 61 PELAGTVGIRSVPTIMAFRDGILVYSQPGAMSPAVLEDLIDQIKGLDMEKVRAKIAERKA 120 >gi|315446685|ref|YP_004079564.1| thioredoxin [Mycobacterium sp. Spyr1] gi|315264988|gb|ADU01730.1| thioredoxin [Mycobacterium sp. Spyr1] Length=124 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 64/108 (60%), Positives = 85/108 (79%), Gaps = 0/108 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 +TT+ LT F TI + +VLVD+WASWCGPCRAF P + SS+ HP+VVHAKVDTE E Sbjct 1 MTTKSLTYDDFESTITGNAIVLVDFWASWCGPCRAFGPVYERSSQAHPEVVHAKVDTEHE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 R+LAA +I SIPT+MAF++G L++ QAGA+PPAALE L+ ++KA ++ Sbjct 61 RDLAATLEITSIPTVMAFRDGVLVYRQAGAMPPAALEDLITRVKALDM 108 >gi|145221580|ref|YP_001132258.1| thioredoxin [Mycobacterium gilvum PYR-GCK] gi|145214066|gb|ABP43470.1| thioredoxin [Mycobacterium gilvum PYR-GCK] Length=124 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 65/118 (56%), Positives = 86/118 (73%), Gaps = 0/118 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T++LT F TI + +VLVD+WASWCGPCRAF P + SSE HP+VVHAKVDT+ ER+ Sbjct 3 TKNLTYDDFESTITGNSIVLVDFWASWCGPCRAFGPVYERSSEAHPEVVHAKVDTQHERD 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRA 120 LAA +I SIPT+MAF++G L++ QAGA+PPAALE L+ ++K ++ A RA Sbjct 63 LAATLEITSIPTVMAFRDGVLVYRQAGAMPPAALEDLIGRVKTLDMAEVRAKINARRA 120 >gi|240171243|ref|ZP_04749902.1| thioredoxin TrxB1_1 [Mycobacterium kansasii ATCC 12478] Length=124 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 64/107 (60%), Positives = 88/107 (83%), Gaps = 0/107 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T +LT F T+ + +VLVD+WA++C PC+AFAP + +S+ HPDVVHAKVDT+AERE Sbjct 3 TVNLTHDTFESTVTDNQLVLVDFWAAYCRPCQAFAPIYEKSARTHPDVVHAKVDTQAERE 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 LAAAA IRSIPTIMAF++G L+++QAGALPPA LE+L+ Q+K+ +++ Sbjct 63 LAAAAGIRSIPTIMAFRDGVLVYSQAGALPPAVLENLIGQMKSLDMD 109 >gi|15827974|ref|NP_302237.1| thioredoxin [Mycobacterium leprae TN] gi|221230451|ref|YP_002503867.1| thioredoxin [Mycobacterium leprae Br4923] gi|13093527|emb|CAC30771.1| thioredoxin [Mycobacterium leprae] gi|219933558|emb|CAR71913.1| thioredoxin [Mycobacterium leprae Br4923] Length=130 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 70/107 (66%), Positives = 81/107 (76%), Gaps = 0/107 (0%) Query 2 TTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAER 61 T RDL A Q NETI ++MVLV +WASWCGP R F PTF SS KH DVVH VDT+AER Sbjct 13 TRRDLIAEQLNETINVNNMVLVAFWASWCGPDRLFVPTFHASSNKHSDVVHLNVDTKAER 72 Query 62 ELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 +LA AAQIRSIPT++AFK GK L +QAG L PA LVQQ+KA++V Sbjct 73 QLALAAQIRSIPTLVAFKKGKPLLSQAGDLTPAVPGYLVQQIKAFDV 119 >gi|281415194|ref|ZP_06246936.1| thioredoxin [Micrococcus luteus NCTC 2665] Length=163 Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 64/108 (60%), Positives = 82/108 (76%), Gaps = 0/108 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 V T+DLT +F T+ +D VLVD+WA WCGPCR FAP F +SEKH DVV AKVDTE + Sbjct 21 VATKDLTLEEFGSTVAENDTVLVDFWAGWCGPCRQFAPVFEAASEKHDDVVFAKVDTEDQ 80 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 ++LAA A I SIPT+MAF+ G L+F+QAGALP ALE L++Q+K ++ Sbjct 81 QQLAAMAGITSIPTLMAFRGGVLVFSQAGALPGTALEQLLEQVKGLDI 128 >gi|120404975|ref|YP_954804.1| thioredoxin [Mycobacterium vanbaalenii PYR-1] gi|119957793|gb|ABM14798.1| thioredoxin [Mycobacterium vanbaalenii PYR-1] Length=125 Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 63/106 (60%), Positives = 83/106 (79%), Gaps = 0/106 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T LT F TI+++ +VLVD+WASWCGPCR+FAP F SS+ HPDVVHAKVDT+ ER+ Sbjct 3 TTSLTYDDFESTIRTNPIVLVDFWASWCGPCRSFAPVFDRSSQTHPDVVHAKVDTQHERD 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 LAA +I SIPT+MAF++G LL+ Q GA+ PAALE L+ ++KA ++ Sbjct 63 LAATLEITSIPTMMAFRDGVLLYRQPGAMHPAALEDLITRVKALDM 108 >gi|120402831|ref|YP_952660.1| thioredoxin [Mycobacterium vanbaalenii PYR-1] gi|119955649|gb|ABM12654.1| thioredoxin [Mycobacterium vanbaalenii PYR-1] Length=125 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 62/106 (59%), Positives = 83/106 (79%), Gaps = 0/106 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T LT F TI+++ +VLVD+WASWCGPCR+FAP F SS+ HPDVVHAKVDT+ ER+ Sbjct 3 TTSLTYDDFESTIRTNPIVLVDFWASWCGPCRSFAPVFDRSSQTHPDVVHAKVDTQHERD 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 LAA +I SIPT+MAF++G L++ Q GA+ PAALE L+ ++KA ++ Sbjct 63 LAATLEITSIPTVMAFRDGVLVYRQPGAMHPAALEDLITRVKALDM 108 >gi|54023846|ref|YP_118088.1| putative thioredoxin [Nocardia farcinica IFM 10152] gi|54015354|dbj|BAD56724.1| putative thioredoxin [Nocardia farcinica IFM 10152] Length=124 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 71/107 (67%), Positives = 87/107 (82%), Gaps = 0/107 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T+ LT F+E + +D+VLVD+WA WCGPCR+FAPT+ SS+KHPDVVH KVDTEAE+ Sbjct 3 TQTLTQQNFDEVVTGNDVVLVDFWAEWCGPCRSFAPTYEASSDKHPDVVHGKVDTEAEQA 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 LAAAA IRSIPTIMAF+ G L+F Q GALPPAALE LV Q+KA +++ Sbjct 63 LAAAANIRSIPTIMAFREGVLVFAQPGALPPAALEDLVTQVKALDMD 109 >gi|239918591|ref|YP_002958149.1| thioredoxin [Micrococcus luteus NCTC 2665] gi|239839798|gb|ACS31595.1| thioredoxin [Micrococcus luteus NCTC 2665] Length=143 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 63/108 (59%), Positives = 82/108 (76%), Gaps = 0/108 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T+DLT +F T+ +D VLVD+WA WCGPCR FAP F +SEKH DVV AKVDTE + Sbjct 1 MATKDLTLEEFGSTVAENDTVLVDFWAGWCGPCRQFAPVFEAASEKHDDVVFAKVDTEDQ 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 ++LAA A I SIPT+MAF+ G L+F+QAGALP ALE L++Q+K ++ Sbjct 61 QQLAAMAGITSIPTLMAFRGGVLVFSQAGALPGTALEQLLEQVKGLDI 108 >gi|326382218|ref|ZP_08203910.1| thioredoxin [Gordonia neofelifaecis NRRL B-59395] gi|326198948|gb|EGD56130.1| thioredoxin [Gordonia neofelifaecis NRRL B-59395] Length=118 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 70/109 (65%), Positives = 89/109 (82%), Gaps = 0/109 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T DL+ F +TI +D+VLVD+WA WCGPC+ FAPT+ +SEKH D+V KVDTEAE Sbjct 1 MATIDLSGDDFEQTIVDNDIVLVDFWADWCGPCKQFAPTYKAASEKHGDIVFGKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 ++LAAAA IRSIPTIMAFK G+L+FN+AGALPP AL+SL+ Q+KA +VE Sbjct 61 QQLAAAASIRSIPTIMAFKQGRLVFNEAGALPPQALDSLIDQVKALDVE 109 >gi|296129178|ref|YP_003636428.1| thioredoxin [Cellulomonas flavigena DSM 20109] gi|296020993|gb|ADG74229.1| thioredoxin [Cellulomonas flavigena DSM 20109] Length=122 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 63/107 (59%), Positives = 84/107 (79%), Gaps = 0/107 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T LTA +TI+ +++VLVD+WASWCGPCR F P F SSE+HP++VHAKVDTEAE+E Sbjct 3 TTTLTADTIADTIKDNEIVLVDFWASWCGPCRMFGPVFEASSEQHPEIVHAKVDTEAEQE 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 LAA +I SIPT+MAF++G L+FNQAGALP +LE +V +K +++ Sbjct 63 LAAELRITSIPTLMAFRDGVLVFNQAGALPAPSLEQVVTAVKELDMD 109 >gi|309812561|ref|ZP_07706308.1| thioredoxin [Dermacoccus sp. Ellin185] gi|308433490|gb|EFP57375.1| thioredoxin [Dermacoccus sp. Ellin185] Length=151 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 60/104 (58%), Positives = 86/104 (83%), Gaps = 0/104 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T +LT +F ETI+++ +VLVD+WA+WCGPCR FAP F +SEKH D+V AKVDT+AE Sbjct 1 MATIELTGEKFTETIENNGIVLVDFWAAWCGPCRQFAPVFEAASEKHDDIVFAKVDTDAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLK 104 +ELAAAA I+SIPT+MAF++G ++F+ +G LP AA+E L++Q++ Sbjct 61 QELAAAANIQSIPTLMAFRDGLMVFSNSGVLPAAAVEDLIRQIR 104 >gi|336321327|ref|YP_004601295.1| thioredoxin [Cellvibrio gilvus ATCC 13127] gi|336104908|gb|AEI12727.1| thioredoxin [Cellvibrio gilvus ATCC 13127] Length=121 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 64/107 (60%), Positives = 82/107 (77%), Gaps = 0/107 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T LTA +TI+ +++VLVD+WA WCGPC+ F P F SS+ HPDVVHAKVDTEAE+ Sbjct 3 TTTLTAETIGQTIKDNEIVLVDFWADWCGPCKRFGPVFEASSDTHPDVVHAKVDTEAEQA 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 LAA QI SIPT+MAF++G L+FNQAGALP ALE +VQ +K +++ Sbjct 63 LAAELQIFSIPTLMAFRDGILVFNQAGALPGPALEQVVQAVKDLDMD 109 >gi|289706462|ref|ZP_06502816.1| thioredoxin [Micrococcus luteus SK58] gi|289556781|gb|EFD50118.1| thioredoxin [Micrococcus luteus SK58] Length=146 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 63/108 (59%), Positives = 81/108 (75%), Gaps = 0/108 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T+DLT +F T+ +D VLVD+WA WCGPCR FAP F +SEKH DVV AKVDTE + Sbjct 1 MATQDLTLEEFGSTVAENDTVLVDFWAGWCGPCRQFAPVFEAASEKHDDVVFAKVDTEDQ 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEV 108 ++LAA A I SIPT+MAF+ G L+F+QAGALP ALE L+ Q+K ++ Sbjct 61 QQLAAMAGITSIPTLMAFRGGVLVFSQAGALPGTALEQLLDQVKGLDI 108 >gi|338532096|ref|YP_004665430.1| thioredoxin [Myxococcus fulvus HW-1] gi|337258192|gb|AEI64352.1| thioredoxin [Myxococcus fulvus HW-1] Length=125 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 62/121 (52%), Positives = 88/121 (73%), Gaps = 2/121 (1%) Query 5 DLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERELA 64 ++T F ET+ +V++D+WASWCGPCRAFAP F ++S KHPD+V K+DT+A++EL+ Sbjct 5 EITKDNFKETVSKEGIVILDWWASWCGPCRAFAPIFEQTSNKHPDIVFGKIDTDAQQELS 64 Query 65 AAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE--AGEATTQNGRAQQ 122 A +IRSIPT+M F++G LLF Q GALP AALE L++Q++A ++E E + G Q Sbjct 65 GAFEIRSIPTLMVFRDGILLFEQPGALPAAALEDLLKQVRALDMEQVRKEVAARRGEPPQ 124 Query 123 A 123 A Sbjct 125 A 125 >gi|302559635|ref|ZP_07311977.1| thioredoxin [Streptomyces griseoflavus Tu4000] gi|302477253|gb|EFL40346.1| thioredoxin [Streptomyces griseoflavus Tu4000] Length=118 Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 61/109 (56%), Positives = 83/109 (77%), Gaps = 0/109 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 ++T DLTAA F T+ +D+VLVD+WASWCGPCR FAP + ++S H D+V KVDTEAE Sbjct 1 MSTVDLTAADFENTVTGNDIVLVDFWASWCGPCRTFAPVYEKASRTHSDIVFGKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 + LAAAA I SIPT+MAF+ G L+F+Q GALPP AL+ L+ ++ +++ Sbjct 61 QSLAAAADITSIPTLMAFREGVLVFSQPGALPPQALDQLITAVRDLDMD 109 >gi|183982651|ref|YP_001850942.1| thioredoxin TrxB1_1 [Mycobacterium marinum M] gi|183175977|gb|ACC41087.1| thioredoxin TrxB1_1 [Mycobacterium marinum M] Length=124 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 64/121 (53%), Positives = 87/121 (72%), Gaps = 0/121 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T L F T+ + +VLVD+WAS+C PC AFAPT+ S++ HPDVVHAKVDT+AE E Sbjct 3 TVSLNHDTFESTVTDNSLVLVDFWASYCRPCHAFAPTYERSAQAHPDVVHAKVDTQAEPE 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEAGEATTQNGRAQQ 122 LAAAA +RSIPT+MAF++G L++NQ GA+P A LE L+ Q+K+ +++ AT +A Sbjct 63 LAAAAGVRSIPTVMAFRDGVLVYNQPGAMPSAVLEDLIGQMKSLDMDKVHATIAARKAAT 122 Query 123 A 123 A Sbjct 123 A 123 >gi|108762614|ref|YP_634965.1| thioredoxin [Myxococcus xanthus DK 1622] gi|108466494|gb|ABF91679.1| thioredoxin [Myxococcus xanthus DK 1622] Length=125 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 62/121 (52%), Positives = 87/121 (72%), Gaps = 2/121 (1%) Query 5 DLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERELA 64 ++T F ET+ +V++D+WASWCGPCRAFAP F ++S HPD+V K+DT+A++EL+ Sbjct 5 EITKDNFKETVSKEGIVILDWWASWCGPCRAFAPIFEQTSNNHPDIVFGKIDTDAQQELS 64 Query 65 AAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVEA--GEATTQNGRAQQ 122 A +IRSIPT+M F++G LLF Q GALP AALE L++Q+KA ++E E + G Q Sbjct 65 GAFEIRSIPTLMVFRDGILLFEQPGALPAAALEDLLKQVKALDMEQVRKEVAAKRGEPPQ 124 Query 123 A 123 A Sbjct 125 A 125 >gi|38234819|ref|NP_940586.1| putative thioredoxin [Corynebacterium diphtheriae NCTC 13129] gi|38201083|emb|CAE50807.1| Putative thioredoxin [Corynebacterium diphtheriae] Length=127 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 61/107 (58%), Positives = 82/107 (77%), Gaps = 0/107 (0%) Query 3 TRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAERE 62 T D+T F +T+ +VLVD WASWCGPCRAFAPT+ ++SE HPD V K+DTEA + Sbjct 3 TIDVTEDTFEQTVTKDGIVLVDAWASWCGPCRAFAPTYEKASENHPDAVFTKLDTEANQG 62 Query 63 LAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 LAAA QI+SIPT+M F++G +++ +AGALPPAALE L+ Q+K ++E Sbjct 63 LAAALQIQSIPTLMVFRDGIMVYREAGALPPAALEDLITQVKGLDME 109 >gi|220910988|ref|YP_002486297.1| thioredoxin [Arthrobacter chlorophenolicus A6] gi|219857866|gb|ACL38208.1| thioredoxin [Arthrobacter chlorophenolicus A6] Length=120 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 60/109 (56%), Positives = 83/109 (77%), Gaps = 0/109 (0%) Query 1 VTTRDLTAAQFNETIQSSDMVLVDYWASWCGPCRAFAPTFAESSEKHPDVVHAKVDTEAE 60 + T D+T F +T++ SD+V VD+WA+WCGPCR FAPT+ ++E+HPD+ AKVDTEAE Sbjct 1 MATIDITEHTFAQTLEGSDIVFVDFWAAWCGPCRMFAPTYGAAAERHPDITFAKVDTEAE 60 Query 61 RELAAAAQIRSIPTIMAFKNGKLLFNQAGALPPAALESLVQQLKAYEVE 109 R LAAAA I SIPT+MAFK+ L+F+Q GAL LE ++Q +KA +++ Sbjct 61 RGLAAAANITSIPTLMAFKDKTLVFSQPGALNATGLEEVIQAVKALDMD 109 Lambda K H 0.315 0.125 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131390282924 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40