BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1487
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608625|ref|NP_216003.1| hypothetical protein Rv1487 [Mycoba... 272 1e-71
gi|183982306|ref|YP_001850597.1| hypothetical protein MMAR_2293 ... 229 1e-58
gi|118617157|ref|YP_905489.1| hypothetical protein MUL_1496 [Myc... 223 9e-57
gi|15827961|ref|NP_302224.1| hypothetical protein ML1803 [Mycoba... 201 3e-50
gi|145224238|ref|YP_001134916.1| hypothetical protein Mflv_3654 ... 198 2e-49
gi|296170653|ref|ZP_06852228.1| membrane protein implicated in r... 189 8e-47
gi|342858778|ref|ZP_08715433.1| nodulation efficiency protein D ... 184 3e-45
gi|333990868|ref|YP_004523482.1| hypothetical protein JDM601_222... 178 3e-43
gi|108800093|ref|YP_640290.1| hypothetical protein Mmcs_3127 [My... 171 2e-41
gi|118469753|ref|YP_887469.1| membrane protein implicated in reg... 170 8e-41
gi|240172232|ref|ZP_04750891.1| hypothetical protein MkanA1_2315... 163 7e-39
gi|254819555|ref|ZP_05224556.1| nodulation efficiency protein D ... 150 8e-35
gi|2183272|gb|AAC46208.1| MAV145 [Mycobacterium avium] 149 2e-34
gi|120403742|ref|YP_953571.1| hypothetical protein Mvan_2758 [My... 148 3e-34
gi|118464558|ref|YP_882473.1| nodulation efficiency protein D (N... 148 3e-34
gi|336458041|gb|EGO37028.1| membrane protein implicated in regul... 145 2e-33
gi|226306570|ref|YP_002766530.1| hypothetical protein RER_30830 ... 141 4e-32
gi|226366415|ref|YP_002784198.1| hypothetical protein ROP_70060 ... 140 8e-32
gi|111024168|ref|YP_707140.1| hypothetical protein RHA1_ro07218 ... 137 4e-31
gi|169629803|ref|YP_001703452.1| hypothetical protein MAB_2719c ... 135 2e-30
gi|312139654|ref|YP_004006990.1| integral membrane protein [Rhod... 122 1e-26
gi|333919594|ref|YP_004493175.1| hypothetical protein AS9A_1926 ... 122 2e-26
gi|325676900|ref|ZP_08156573.1| membrane protein [Rhodococcus eq... 121 4e-26
gi|54025442|ref|YP_119684.1| hypothetical protein nfa34720 [Noca... 119 1e-25
gi|302527441|ref|ZP_07279783.1| predicted protein [Streptomyces ... 111 4e-23
gi|21324302|dbj|BAB98927.1| Membrane protein implicated in regul... 108 2e-22
gi|19552747|ref|NP_600749.1| membrane protein [Corynebacterium g... 108 3e-22
gi|145295665|ref|YP_001138486.1| hypothetical protein cgR_1592 [... 108 3e-22
gi|344045011|gb|EGV40685.1| hypothetical protein CgS9114_06795 [... 107 4e-22
gi|343927981|ref|ZP_08767447.1| hypothetical protein GOALK_099_0... 107 6e-22
gi|300858492|ref|YP_003783475.1| hypothetical protein cpfrc_0107... 105 2e-21
gi|257055992|ref|YP_003133824.1| membrane protein implicated in ... 105 2e-21
gi|334696865|gb|AEG81662.1| hypothetical protein CULC809_01129 [... 104 4e-21
gi|337290752|ref|YP_004629773.1| hypothetical protein CULC22_011... 103 6e-21
gi|41407311|ref|NP_960147.1| hypothetical protein MAP1213 [Mycob... 103 8e-21
gi|172041308|ref|YP_001801022.1| hypothetical protein cur_1628 [... 102 3e-20
gi|300786547|ref|YP_003766838.1| membrane protein implicated in ... 100 7e-20
gi|258652520|ref|YP_003201676.1| hypothetical protein Namu_2311 ... 97.8 4e-19
gi|134100317|ref|YP_001105978.1| membrane protein implicated in ... 97.1 8e-19
gi|262202340|ref|YP_003273548.1| hypothetical protein Gbro_2413 ... 96.7 1e-18
gi|25028211|ref|NP_738265.1| hypothetical protein CE1655 [Coryne... 96.7 1e-18
gi|145595537|ref|YP_001159834.1| hypothetical protein Strop_3019... 96.3 1e-18
gi|319950153|ref|ZP_08024089.1| hypothetical protein ES5_11336 [... 94.4 5e-18
gi|300781171|ref|ZP_07091025.1| membrane protein [Corynebacteriu... 94.4 5e-18
gi|159038787|ref|YP_001538040.1| hypothetical protein Sare_3245 ... 92.4 2e-17
gi|296139798|ref|YP_003647041.1| hypothetical protein Tpau_2090 ... 91.3 5e-17
gi|239986757|ref|ZP_04707421.1| hypothetical protein SrosN1_0556... 90.1 9e-17
gi|117928362|ref|YP_872913.1| hypothetical protein Acel_1155 [Ac... 89.7 1e-16
gi|326773521|ref|ZP_08232804.1| integral membrane protein [Actin... 89.7 1e-16
gi|302533684|ref|ZP_07286026.1| integral membrane protein [Strep... 88.6 3e-16
>gi|15608625|ref|NP_216003.1| hypothetical protein Rv1487 [Mycobacterium tuberculosis H37Rv]
gi|15840948|ref|NP_335985.1| hypothetical protein MT1533.1 [Mycobacterium tuberculosis CDC1551]
gi|31792682|ref|NP_855175.1| hypothetical protein Mb1523 [Mycobacterium bovis AF2122/97]
80 more sequence titles
Length=144
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL
Sbjct 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD
Sbjct 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
Query 121 VFEPGDSVTVVQIDGATAVVFKDV 144
VFEPGDSVTVVQIDGATAVVFKDV
Sbjct 121 VFEPGDSVTVVQIDGATAVVFKDV 144
>gi|183982306|ref|YP_001850597.1| hypothetical protein MMAR_2293 [Mycobacterium marinum M]
gi|183175632|gb|ACC40742.1| conserved membrane protein [Mycobacterium marinum M]
Length=144
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/144 (82%), Positives = 129/144 (90%), Gaps = 0/144 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MPVALIWLIAALVL GAEALTGDMFLLML GGALAAS SWL WP+WADGAVFL+VSVL
Sbjct 1 MPVALIWLIAALVLAGAEALTGDMFLLMLSGGALAASGISWLTDWPLWADGAVFLIVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LL LVRPA+RR+L K +QLGI+ALEGK A+VL RVARD GQVK++G+VWTARPLNDGD
Sbjct 61 LLALVRPALRRKLAPAKALQLGIKALEGKNALVLDRVARDNGQVKIEGEVWTARPLNDGD 120
Query 121 VFEPGDSVTVVQIDGATAVVFKDV 144
VFEPGDSVTVV IDGATAVVF+DV
Sbjct 121 VFEPGDSVTVVHIDGATAVVFRDV 144
>gi|118617157|ref|YP_905489.1| hypothetical protein MUL_1496 [Mycobacterium ulcerans Agy99]
gi|118569267|gb|ABL04018.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=144
Score = 223 bits (567), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 114/144 (80%), Positives = 128/144 (89%), Gaps = 0/144 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MPVALIWLIAALVL GAEALTGD+FLLML GGALAAS WL WP+WADGAVFL+VSVL
Sbjct 1 MPVALIWLIAALVLAGAEALTGDIFLLMLSGGALAASGIRWLTDWPLWADGAVFLIVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LL LVRPA+RR+L K +QLGI+ALEGK A+VL RVARD GQ+K++G+VWTARPLNDGD
Sbjct 61 LLALVRPALRRKLAPAKALQLGIKALEGKNALVLDRVARDNGQLKIEGEVWTARPLNDGD 120
Query 121 VFEPGDSVTVVQIDGATAVVFKDV 144
VFEPGDSVTVV I+GATAVVF+DV
Sbjct 121 VFEPGDSVTVVHIEGATAVVFRDV 144
>gi|15827961|ref|NP_302224.1| hypothetical protein ML1803 [Mycobacterium leprae TN]
gi|221230438|ref|YP_002503854.1| hypothetical protein MLBr_01803 [Mycobacterium leprae Br4923]
gi|13093514|emb|CAC30756.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933545|emb|CAR71898.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=143
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/143 (75%), Positives = 121/143 (85%), Gaps = 1/143 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MPVAL+WLI ALVL AEALTGDMFLLMLGGGALA++VS WL WP+W DG VFL+VSVL
Sbjct 1 MPVALVWLIFALVLACAEALTGDMFLLMLGGGALASAVSGWLTDWPIWVDGTVFLIVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LL LVRPAV RRLT G QLGI+ALEGK A+VL RVAR+ GQVKLDGQVWTAR L+D D
Sbjct 61 LLTLVRPAV-RRLTPALGTQLGIKALEGKAALVLDRVARNEGQVKLDGQVWTARTLSDDD 119
Query 121 VFEPGDSVTVVQIDGATAVVFKD 143
V+E G+SV VV IDGATA+VF++
Sbjct 120 VYEAGESVIVVHIDGATAMVFRN 142
>gi|145224238|ref|YP_001134916.1| hypothetical protein Mflv_3654 [Mycobacterium gilvum PYR-GCK]
gi|315444574|ref|YP_004077453.1| hypothetical protein Mspyr1_30000 [Mycobacterium sp. Spyr1]
gi|145216724|gb|ABP46128.1| protein of unknown function DUF107 [Mycobacterium gilvum PYR-GCK]
gi|315262877|gb|ADT99618.1| membrane protein implicated in regulation of membrane protease
activity [Mycobacterium sp. Spyr1]
Length=144
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/142 (73%), Positives = 119/142 (84%), Gaps = 0/142 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MPV LIWLIAALVL GAEALTGD+FLLML GGALAA+ SS+LL WP+WADG VFL+VSVL
Sbjct 1 MPVPLIWLIAALVLAGAEALTGDLFLLMLSGGALAAAGSSFLLDWPIWADGIVFLIVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLV VRPA++RR+ G+ ++ALEG+ A+VL RVA GQVKLDG+VWTARP N+ D
Sbjct 61 LLVGVRPALKRRMQSGTGLPEPVKALEGRSALVLDRVAHHEGQVKLDGEVWTARPYNEND 120
Query 121 VFEPGDSVTVVQIDGATAVVFK 142
V+EPGD VTVVQIDGATAVV K
Sbjct 121 VYEPGDHVTVVQIDGATAVVSK 142
>gi|296170653|ref|ZP_06852228.1| membrane protein implicated in regulation of membrane protease
activity [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894642|gb|EFG74376.1| membrane protein implicated in regulation of membrane protease
activity [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=145
Score = 189 bits (481), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/143 (77%), Positives = 124/143 (87%), Gaps = 0/143 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
M A++WLI ALVL GAEALTGDMFLLMLGGGALAAS SWL WP+WADG VFL+VSVL
Sbjct 1 MHAAVLWLIFALVLAGAEALTGDMFLLMLGGGALAASGISWLTDWPVWADGTVFLIVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLVLVRPA+RRRLT +LGIEALEGK A+VL R++RD GQVKLDG+VWTARPLN+ D
Sbjct 61 LLVLVRPALRRRLTPAHVPRLGIEALEGKNALVLARISRDEGQVKLDGEVWTARPLNEAD 120
Query 121 VFEPGDSVTVVQIDGATAVVFKD 143
V+EPG+SVTV+QIDGATAVVFK
Sbjct 121 VYEPGESVTVLQIDGATAVVFKS 143
>gi|342858778|ref|ZP_08715433.1| nodulation efficiency protein D (NfeD) [Mycobacterium colombiense
CECT 3035]
gi|342134482|gb|EGT87662.1| nodulation efficiency protein D (NfeD) [Mycobacterium colombiense
CECT 3035]
Length=145
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/143 (73%), Positives = 125/143 (88%), Gaps = 0/143 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MP AL+WLI ALVL GAEALTG +FL+MLGGGALAAS++SW+ P+WA+GAVFL+VSVL
Sbjct 1 MPAALLWLIFALVLAGAEALTGHLFLVMLGGGALAASLTSWVTDLPVWANGAVFLVVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLVLVRP ++RRLT +LGIEAL+GK A+VL RVARD GQVKLDGQVW+ARPL+DG+
Sbjct 61 LLVLVRPPLKRRLTPAGMPRLGIEALQGKTALVLERVARDEGQVKLDGQVWSARPLDDGE 120
Query 121 VFEPGDSVTVVQIDGATAVVFKD 143
V+EPG+ VTV+QIDGATAVVF+
Sbjct 121 VYEPGEPVTVMQIDGATAVVFRS 143
>gi|333990868|ref|YP_004523482.1| hypothetical protein JDM601_2228 [Mycobacterium sp. JDM601]
gi|333486836|gb|AEF36228.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=144
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/142 (72%), Positives = 117/142 (83%), Gaps = 0/142 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
M AL+WL+ AL L GAEALTGDMFLLML GGAL+A+ +SWL WP+W DGAVFL+VSVL
Sbjct 1 MSAALVWLVFALGLAGAEALTGDMFLLMLSGGALSAAGASWLTNWPLWTDGAVFLVVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLVLVRPA+RRRL G + G+ AL+GK A+VL RV + GGQVKLDG+VWTARPL DGD
Sbjct 61 LLVLVRPALRRRLWAGAGAETGVRALQGKTALVLDRVEQHGGQVKLDGEVWTARPLTDGD 120
Query 121 VFEPGDSVTVVQIDGATAVVFK 142
VFEPG+ VTV+ IDGATAVV K
Sbjct 121 VFEPGEQVTVMHIDGATAVVSK 142
>gi|108800093|ref|YP_640290.1| hypothetical protein Mmcs_3127 [Mycobacterium sp. MCS]
gi|119869220|ref|YP_939172.1| hypothetical protein Mkms_3188 [Mycobacterium sp. KMS]
gi|126435717|ref|YP_001071408.1| hypothetical protein Mjls_3138 [Mycobacterium sp. JLS]
gi|108770512|gb|ABG09234.1| protein of unknown function DUF107 [Mycobacterium sp. MCS]
gi|119695309|gb|ABL92382.1| protein of unknown function DUF107 [Mycobacterium sp. KMS]
gi|126235517|gb|ABN98917.1| protein of unknown function DUF107 [Mycobacterium sp. JLS]
Length=144
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/143 (70%), Positives = 118/143 (83%), Gaps = 0/143 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MPV LIWL+ A+VL GAEALTGDMFLLML GGALAA+ +SWL WP+WADG VFLLVSVL
Sbjct 1 MPVWLIWLVLAIVLAGAEALTGDMFLLMLSGGALAATGTSWLFDWPIWADGVVFLLVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LL +VRP +RRR G+ +ALEGK A+VL RVA+ GQVKL+G+VWTARPL+D D
Sbjct 61 LLGVVRPVLRRRFYAGTGLPEPAKALEGKTALVLDRVAQHAGQVKLEGEVWTARPLDDND 120
Query 121 VFEPGDSVTVVQIDGATAVVFKD 143
V+EPGD VTV++IDGATAVV+K+
Sbjct 121 VYEPGDQVTVMRIDGATAVVWKN 143
>gi|118469753|ref|YP_887469.1| membrane protein implicated in regulation of membrane protease
activity [Mycobacterium smegmatis str. MC2 155]
gi|118171040|gb|ABK71936.1| membrane protein implicated in regulation of membrane protease
activity [Mycobacterium smegmatis str. MC2 155]
Length=144
Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/144 (71%), Positives = 117/144 (82%), Gaps = 0/144 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MP LIWLI AL L GAEALTGD+FLLML GGALAA+ SS L WP+WADG VFL+VSVL
Sbjct 1 MPYWLIWLILALGLAGAEALTGDLFLLMLAGGALAATGSSALFDWPIWADGLVFLVVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLV VRPA+R+R KG+ ++ALEG+ A+VL RVA GQVKLDG+VWTARPLND D
Sbjct 61 LLVGVRPALRKRFDGGKGLPEPVKALEGRPALVLDRVASHEGQVKLDGEVWTARPLNDDD 120
Query 121 VFEPGDSVTVVQIDGATAVVFKDV 144
V+EPG+ VTVV+IDGATAVVFK V
Sbjct 121 VYEPGEHVTVVRIDGATAVVFKTV 144
>gi|240172232|ref|ZP_04750891.1| hypothetical protein MkanA1_23154 [Mycobacterium kansasii ATCC
12478]
Length=144
Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/143 (83%), Positives = 132/143 (93%), Gaps = 0/143 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MPVAL+WL+AALVLV AEALTGDMFLLMLGGGALAA+ SSWL+ WP+WADG VFL+VSVL
Sbjct 1 MPVALLWLVAALVLVSAEALTGDMFLLMLGGGALAAAGSSWLMDWPLWADGVVFLVVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLVLVRPA+RRR+T KG+ +GI+ALEGK A+VL RVARD GQVK+DGQVWTARPLN+GD
Sbjct 61 LLVLVRPALRRRITPGKGLPMGIKALEGKNALVLDRVARDEGQVKIDGQVWTARPLNEGD 120
Query 121 VFEPGDSVTVVQIDGATAVVFKD 143
VFEPGDSVTVV IDGATAVVFKD
Sbjct 121 VFEPGDSVTVVHIDGATAVVFKD 143
>gi|254819555|ref|ZP_05224556.1| nodulation efficiency protein D (NfeD) [Mycobacterium intracellulare
ATCC 13950]
Length=144
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/142 (76%), Positives = 123/142 (87%), Gaps = 1/142 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
M AL+WLI ALVL GAEALTG MFL+MLGGGALAA+++SWLL P+W DGAVFL+VSVL
Sbjct 1 MHAALLWLIFALVLAGAEALTGHMFLVMLGGGALAAALTSWLLDSPVWVDGAVFLVVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLV+VRP +RRRLT +LGIEALEGK A+VL RVARD GQVKLDGQVWTARPL++ D
Sbjct 61 LLVVVRPPLRRRLTPNVP-RLGIEALEGKTALVLERVARDNGQVKLDGQVWTARPLDEND 119
Query 121 VFEPGDSVTVVQIDGATAVVFK 142
V+EPG+ VTV+QIDGATAVVFK
Sbjct 120 VYEPGEPVTVMQIDGATAVVFK 141
>gi|2183272|gb|AAC46208.1| MAV145 [Mycobacterium avium]
Length=145
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/143 (73%), Positives = 122/143 (86%), Gaps = 0/143 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
M A++WLI ALVL GAEALTG +FL+MLGGGALAA+++SWL +P+W +G VFL+VSVL
Sbjct 1 MHAAVLWLIFALVLAGAEALTGHLFLVMLGGGALAAALTSWLTDFPVWLNGTVFLVVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLV+VRP +RRRLT QLGIEALEGK A+VL RVARD GQVKLDGQVWTARPL++ D
Sbjct 61 LLVVVRPPLRRRLTPAAMPQLGIEALEGKTALVLERVARDRGQVKLDGQVWTARPLDEND 120
Query 121 VFEPGDSVTVVQIDGATAVVFKD 143
V+EPG+ VTV+QIDGATAVVFK
Sbjct 121 VYEPGEPVTVMQIDGATAVVFKS 143
>gi|120403742|ref|YP_953571.1| hypothetical protein Mvan_2758 [Mycobacterium vanbaalenii PYR-1]
gi|119956560|gb|ABM13565.1| protein of unknown function DUF107 [Mycobacterium vanbaalenii
PYR-1]
Length=144
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/142 (75%), Positives = 118/142 (84%), Gaps = 0/142 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MPV+LIWLIAAL L GAEALTGD+FLLML GGALAA+ SS+LL WP+WADG VFLLVSVL
Sbjct 1 MPVSLIWLIAALALAGAEALTGDLFLLMLSGGALAAAGSSFLLNWPIWADGIVFLLVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLV VRPA+RRRL +G+ +ALEGK A+VL RVA GQVKLDG+VWTARP N+ D
Sbjct 61 LLVGVRPALRRRLMSGRGLPEPAKALEGKSALVLDRVAIHEGQVKLDGEVWTARPYNEND 120
Query 121 VFEPGDSVTVVQIDGATAVVFK 142
VFEPGD VTVV IDGATAVV K
Sbjct 121 VFEPGDHVTVVHIDGATAVVAK 142
>gi|118464558|ref|YP_882473.1| nodulation efficiency protein D (NfeD) [Mycobacterium avium 104]
gi|254775736|ref|ZP_05217252.1| nodulation efficiency protein D (NfeD) [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165845|gb|ABK66742.1| nodulation efficiency protein D (NfeD) [Mycobacterium avium 104]
Length=145
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/143 (73%), Positives = 121/143 (85%), Gaps = 0/143 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
M A++WLI ALVL GAEALTG +FL+MLGGGALAA+++SWL +P W +G VFL+VSVL
Sbjct 1 MHAAVLWLIFALVLAGAEALTGHLFLVMLGGGALAAALTSWLTDFPAWLNGTVFLVVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLV+VRP +RRRLT QLGIEALEGK A+VL RVARD GQVKLDGQVWTARPL++ D
Sbjct 61 LLVVVRPPLRRRLTPAAVPQLGIEALEGKTALVLERVARDRGQVKLDGQVWTARPLDEND 120
Query 121 VFEPGDSVTVVQIDGATAVVFKD 143
V+EPG+ VTV+QIDGATAVVFK
Sbjct 121 VYEPGEPVTVMQIDGATAVVFKS 143
>gi|336458041|gb|EGO37028.1| membrane protein implicated in regulation of membrane protease
activity [Mycobacterium avium subsp. paratuberculosis S397]
Length=145
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/143 (73%), Positives = 121/143 (85%), Gaps = 0/143 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
M A++WLI ALVL GAEALTG +FL+MLGGGALAA+++SWL +P W +GAVFL+VSVL
Sbjct 1 MHAAVLWLIFALVLAGAEALTGHLFLVMLGGGALAAALTSWLTDFPAWLNGAVFLVVSVL 60
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLV+VRP +RRRLT QLGI ALEGK A+VL RVARD GQVKLDGQVWTARPL++ D
Sbjct 61 LLVVVRPPLRRRLTPAAVPQLGIVALEGKTALVLERVARDRGQVKLDGQVWTARPLDEND 120
Query 121 VFEPGDSVTVVQIDGATAVVFKD 143
V+EPG+ VTV+QIDGATAVVFK
Sbjct 121 VYEPGEPVTVMQIDGATAVVFKS 143
>gi|226306570|ref|YP_002766530.1| hypothetical protein RER_30830 [Rhodococcus erythropolis PR4]
gi|229493541|ref|ZP_04387326.1| putative membrane protein [Rhodococcus erythropolis SK121]
gi|226185687|dbj|BAH33791.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229319502|gb|EEN85338.1| putative membrane protein [Rhodococcus erythropolis SK121]
Length=143
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/139 (55%), Positives = 96/139 (70%), Gaps = 0/139 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
ALIWLI ALVL GAEAL GD FLLML GGALA + S + +P+W D +F + S L++
Sbjct 3 ALIWLIGALVLAGAEALVGDFFLLMLAGGALATAGVSAVTDFPVWVDAVMFGVFSAALVL 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
VRP + RR GI+ALEGK A+VL V GQVKLDG+VWTARP + +V+
Sbjct 63 GVRPIMLRRFGSPPPTPTGIQALEGKHALVLEEVGEHSGQVKLDGEVWTARPYDTTEVYP 122
Query 124 PGDSVTVVQIDGATAVVFK 142
PG VTV++I+GATAVV++
Sbjct 123 PGTKVTVMEINGATAVVWR 141
>gi|226366415|ref|YP_002784198.1| hypothetical protein ROP_70060 [Rhodococcus opacus B4]
gi|226244905|dbj|BAH55253.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=143
Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/139 (53%), Positives = 99/139 (72%), Gaps = 0/139 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
ALIWL+A ++L AEALTGD FLLML GGALA + + + +P+W D +F ++S+ L++
Sbjct 3 ALIWLVAGVLLAAAEALTGDFFLLMLAGGALATAGVTAITDFPVWVDAVIFGVLSLALIL 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
VRP + R+ GIEAL GK+A+VL VA GQ+KL G VWTARPL+ +V+
Sbjct 63 GVRPVLLRKFETPPPTPTGIEALTGKQALVLEEVAEHAGQIKLGGDVWTARPLDSTEVYP 122
Query 124 PGDSVTVVQIDGATAVVFK 142
PG +VTV+QIDGATAVV++
Sbjct 123 PGTTVTVMQIDGATAVVWR 141
>gi|111024168|ref|YP_707140.1| hypothetical protein RHA1_ro07218 [Rhodococcus jostii RHA1]
gi|110823698|gb|ABG98982.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=140
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/138 (52%), Positives = 98/138 (72%), Gaps = 0/138 (0%)
Query 5 LIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVL 64
+IWL+A ++L AEALTGD FLLML GGALA + + + +P+W D +F ++S+ L++
Sbjct 1 MIWLVAGVLLAAAEALTGDFFLLMLAGGALATAGVTAITDFPVWVDAVIFGVLSLALILG 60
Query 65 VRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFEP 124
VRP + R+ GIEAL GK+A+VL VA GQ+KL G VWTARPL+ +V+ P
Sbjct 61 VRPVLLRKFETPPPTPTGIEALTGKQALVLEEVAEHAGQIKLGGDVWTARPLDSTEVYPP 120
Query 125 GDSVTVVQIDGATAVVFK 142
G +VTV+QIDGATAVV++
Sbjct 121 GTTVTVMQIDGATAVVWR 138
>gi|169629803|ref|YP_001703452.1| hypothetical protein MAB_2719c [Mycobacterium abscessus ATCC
19977]
gi|169241770|emb|CAM62798.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=141
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/142 (53%), Positives = 99/142 (70%), Gaps = 2/142 (1%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MP+ +WL+A ++L AE +TGDMFLLMLGG AL + + W P+WA+G VF++ +V+
Sbjct 1 MPI--VWLVAGILLAAAELMTGDMFLLMLGGSALVTAGAGWAFDMPLWAEGLVFVISAVV 58
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LLV VRPA+RRRLT + +ALEGK A+V+ V G V+L G++WTAR L
Sbjct 59 LLVGVRPALRRRLTAGPVLHTNAKALEGKSAIVIEPVDDLHGLVRLGGEMWTARSLEKSG 118
Query 121 VFEPGDSVTVVQIDGATAVVFK 142
FE G++VTVVQIDGATAVV K
Sbjct 119 RFEQGETVTVVQIDGATAVVEK 140
>gi|312139654|ref|YP_004006990.1| integral membrane protein [Rhodococcus equi 103S]
gi|311888993|emb|CBH48306.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=143
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/139 (53%), Positives = 98/139 (71%), Gaps = 0/139 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
ALIWL+A ++L AEAL G+ FLLML GGALA + S +P+W D VF +VS++L++
Sbjct 3 ALIWLVAGVLLAAAEALVGEFFLLMLAGGALATAGFSAATDFPVWVDAVVFGVVSLVLVL 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
VRPA+ RR + + EAL GK A+VL V G+VKLDG VWTARPL+ +V+
Sbjct 63 GVRPALLRRFEKPPLKLMNTEALPGKHALVLEEVGEHAGRVKLDGDVWTARPLDVSEVYP 122
Query 124 PGDSVTVVQIDGATAVVFK 142
PG +VTV++IDGATAVV++
Sbjct 123 PGTTVTVMEIDGATAVVWR 141
>gi|333919594|ref|YP_004493175.1| hypothetical protein AS9A_1926 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481815|gb|AEF40375.1| Hypothetical membrane protein [Amycolicicoccus subflavus DQS3-9A1]
Length=143
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/140 (45%), Positives = 92/140 (66%), Gaps = 0/140 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A++W + A++L AE L G+ FLLML G ALA + SW+ +P+W D FL++SV LLV
Sbjct 3 AILWFVGAVLLAVAELLVGEFFLLMLAGSALATAGFSWIFDFPVWVDALFFLVMSVALLV 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
VRP + R+L ++ + LEG+ AVV + + GQ+KL G++WTARPL+ + +
Sbjct 63 GVRPILLRKLHTNPAIEGTVAELEGRTAVVTREITGEQGQIKLMGELWTARPLDITEKYP 122
Query 124 PGDSVTVVQIDGATAVVFKD 143
G SVTV IDG+TA+V++
Sbjct 123 EGTSVTVAHIDGSTAIVWRQ 142
>gi|325676900|ref|ZP_08156573.1| membrane protein [Rhodococcus equi ATCC 33707]
gi|325552448|gb|EGD22137.1| membrane protein [Rhodococcus equi ATCC 33707]
Length=143
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/139 (53%), Positives = 97/139 (70%), Gaps = 0/139 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
ALIWL+A ++L AEAL G+ FLLML GGALA + S +P+W D VF +VS++L++
Sbjct 3 ALIWLVAGVLLAAAEALVGEFFLLMLAGGALATAGFSAATDFPVWVDAVVFGVVSLVLVL 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
VRPA+ RR + + EAL GK A+VL V G+VKLDG VWTARPL+ V+
Sbjct 63 GVRPALLRRFEKPPLKLMNTEALPGKHALVLEEVGEHAGRVKLDGDVWTARPLDVSAVYP 122
Query 124 PGDSVTVVQIDGATAVVFK 142
PG +VTV++IDGATAVV++
Sbjct 123 PGTTVTVMEIDGATAVVWR 141
>gi|54025442|ref|YP_119684.1| hypothetical protein nfa34720 [Nocardia farcinica IFM 10152]
gi|54016950|dbj|BAD58320.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=143
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/139 (49%), Positives = 91/139 (66%), Gaps = 0/139 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A+ WL+A ++L AE L GD+ LLM+G AL + S + D VF +++++LL+
Sbjct 3 AIAWLVAGILLAAAEMLVGDLTLLMIGVAALGTAGVSAAADTSVIVDAVVFGVITLVLLL 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
VRP +RRR V + AL GK A+VL V G VKL G+VWTARP+N GDVFE
Sbjct 63 GVRPVLRRRFGTPPPVPTNVHALPGKTALVLEEVTDTAGLVKLAGEVWTARPMNQGDVFE 122
Query 124 PGDSVTVVQIDGATAVVFK 142
PG +V+V++IDGATAVV+K
Sbjct 123 PGTTVSVMEIDGATAVVWK 141
>gi|302527441|ref|ZP_07279783.1| predicted protein [Streptomyces sp. AA4]
gi|302436336|gb|EFL08152.1| predicted protein [Streptomyces sp. AA4]
Length=144
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/141 (49%), Positives = 92/141 (66%), Gaps = 2/141 (1%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
M ALIWLI +VL+ AE ++GD L+MLG GAL + + L ++ D AVF + SV
Sbjct 1 MAAALIWLIIGIVLMIAEVISGDFVLIMLGIGALLGA-GTEALTGNIFIDVAVFAVSSVG 59
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LL L RPA++RR G+ GI+AL G +AVV+ V D GQVK+ G+VW+AR +++
Sbjct 60 LLALARPALKRRFLAGSGIPTGIDALVGARAVVVSTVDYDAGQVKIGGEVWSARAVHESQ 119
Query 121 -VFEPGDSVTVVQIDGATAVV 140
PG SVTVV+I GATAVV
Sbjct 120 PPIAPGTSVTVVEISGATAVV 140
>gi|21324302|dbj|BAB98927.1| Membrane protein implicated in regulation of membrane protease
activity [Corynebacterium glutamicum ATCC 13032]
Length=145
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/140 (44%), Positives = 87/140 (63%), Gaps = 1/140 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A+IW I ALVL G E G+ LLMLGG ALA + + L+ P+WA+ F + S LL+
Sbjct 6 AIIWFIGALVLAGLELAVGEFTLLMLGGAALATAGVA-LIGVPVWAEFVTFAVASAALLM 64
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
+RPA+R+RL + K + AL G +A VL V GQV+LDG +W+AR ++ F
Sbjct 65 FIRPAIRKRLLKPKVLDSSPRALVGHRAEVLEDVGATSGQVRLDGSIWSARSMDPTHTFA 124
Query 124 PGDSVTVVQIDGATAVVFKD 143
G+ V+V+ I G TA+V+K+
Sbjct 125 EGEIVSVIDIQGTTAIVWKE 144
>gi|19552747|ref|NP_600749.1| membrane protein [Corynebacterium glutamicum ATCC 13032]
gi|62390416|ref|YP_225818.1| membrane protein implicated in regulation of membrane protease
activity [Corynebacterium glutamicum ATCC 13032]
gi|41325753|emb|CAF21542.1| Membrane protein implicated in regulation of membrane protease
activity [Corynebacterium glutamicum ATCC 13032]
Length=142
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/140 (44%), Positives = 87/140 (63%), Gaps = 1/140 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A+IW I ALVL G E G+ LLMLGG ALA + + L+ P+WA+ F + S LL+
Sbjct 3 AIIWFIGALVLAGLELAVGEFTLLMLGGAALATAGVA-LIGVPVWAEFVTFAVASAALLM 61
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
+RPA+R+RL + K + AL G +A VL V GQV+LDG +W+AR ++ F
Sbjct 62 FIRPAIRKRLLKPKVLDSSPRALVGHRAEVLEDVGATSGQVRLDGSIWSARSMDPTHTFA 121
Query 124 PGDSVTVVQIDGATAVVFKD 143
G+ V+V+ I G TA+V+K+
Sbjct 122 EGEIVSVIDIQGTTAIVWKE 141
>gi|145295665|ref|YP_001138486.1| hypothetical protein cgR_1592 [Corynebacterium glutamicum R]
gi|140845585|dbj|BAF54584.1| hypothetical protein [Corynebacterium glutamicum R]
Length=145
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/140 (44%), Positives = 87/140 (63%), Gaps = 1/140 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A+IW I ALVL G E G+ LLMLGG ALA + + L+ P+WA+ F + S LL+
Sbjct 6 AIIWFIGALVLAGLELAVGEFTLLMLGGAALATAGVA-LIGVPVWAEFVTFAVASAALLM 64
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
+RPA+R+RL + K + AL G +A VL V GQV+LDG +W+AR ++ F
Sbjct 65 FIRPAIRKRLLKPKVLDSSPRALVGYRAEVLEDVGATSGQVRLDGSIWSARSMDPTHTFA 124
Query 124 PGDSVTVVQIDGATAVVFKD 143
G+ V+V+ I G TA+V+K+
Sbjct 125 EGEIVSVIDIQGTTAIVWKE 144
>gi|344045011|gb|EGV40685.1| hypothetical protein CgS9114_06795 [Corynebacterium glutamicum
S9114]
Length=142
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/140 (44%), Positives = 87/140 (63%), Gaps = 1/140 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A+IW I ALVL G E G+ LLMLGG ALA + + L+ P+WA+ F + S LL+
Sbjct 3 AIIWFIGALVLAGLELAVGEFTLLMLGGAALATAGVA-LIGVPVWAEFVTFAVASAALLM 61
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
+RPA+R+RL + K + AL G +A VL V GQV+LDG +W+AR ++ F
Sbjct 62 FIRPAIRKRLLKPKVLDSSPRALVGYRAEVLEDVGATSGQVRLDGSIWSARSMDPTHTFA 121
Query 124 PGDSVTVVQIDGATAVVFKD 143
G+ V+V+ I G TA+V+K+
Sbjct 122 EGEIVSVIDIQGTTAIVWKE 141
>gi|343927981|ref|ZP_08767447.1| hypothetical protein GOALK_099_01130 [Gordonia alkanivorans NBRC
16433]
gi|343762204|dbj|GAA14373.1| hypothetical protein GOALK_099_01130 [Gordonia alkanivorans NBRC
16433]
Length=142
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/139 (52%), Positives = 93/139 (67%), Gaps = 0/139 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
AL+WL AA+VLV AE G++ LLML GGALAA+ ++ P+W DG VF VS+LLLV
Sbjct 3 ALLWLAAAIVLVVAEMFGGELVLLMLAGGALAAAGVDFVWEPPLWVDGLVFAAVSMLLLV 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
VRP +R + V + EALEG+ AVV V D G+VK+ G +W+AR ++ V E
Sbjct 63 AVRPVAKRHMLNRPSVLMNTEALEGQPAVVTETVDGDDGRVKIGGDIWSARSVDPAQVLE 122
Query 124 PGDSVTVVQIDGATAVVFK 142
PG VTVV+IDGATAVV+
Sbjct 123 PGTHVTVVEIDGATAVVWD 141
>gi|300858492|ref|YP_003783475.1| hypothetical protein cpfrc_01075 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685946|gb|ADK28868.1| hypothetical protein cpfrc_01075 [Corynebacterium pseudotuberculosis
FRC41]
gi|302206201|gb|ADL10543.1| NfeD-like protein [Corynebacterium pseudotuberculosis C231]
gi|302330760|gb|ADL20954.1| NfeD-like protein [Corynebacterium pseudotuberculosis 1002]
gi|308276443|gb|ADO26342.1| NfeD-like protein [Corynebacterium pseudotuberculosis I19]
gi|341824884|gb|AEK92405.1| NfeD-like protein [Corynebacterium pseudotuberculosis PAT10]
Length=142
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/141 (44%), Positives = 93/141 (66%), Gaps = 1/141 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
ALIWLIA + L+G E L G++ LMLG GALAA+ A P+WA+ A F + S+ L
Sbjct 3 ALIWLIAGISLIGLELLAGELTFLMLGLGALAAAAVGLTDA-PLWAEAATFAVTSIAFLF 61
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
+++P ++++L + + AL G A V+ + +GGQ++ DG +W+AR L+ G F
Sbjct 62 ILKPTLKKKLYNPVALDTSVRALIGSTAEVIEPITENGGQIRFDGSIWSARSLDPGHHFS 121
Query 124 PGDSVTVVQIDGATAVVFKDV 144
PG SV+V++IDGATAVV+K+V
Sbjct 122 PGQSVSVIEIDGATAVVWKEV 142
>gi|257055992|ref|YP_003133824.1| membrane protein implicated in regulation of membrane protease
activity [Saccharomonospora viridis DSM 43017]
gi|256585864|gb|ACU96997.1| membrane protein implicated in regulation of membrane protease
activity [Saccharomonospora viridis DSM 43017]
Length=143
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/140 (47%), Positives = 90/140 (65%), Gaps = 1/140 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
M A+IWLI + L+ AE L+GD L+MLG GALA + S+ + P+ VF + S
Sbjct 1 MTPAIIWLIVGVALIAAEVLSGDFVLVMLGLGALAGAGSTLISDNPII-HVIVFAVASTA 59
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
L+VL RPA++R V++ EAL G +AV + V GGQVKL G++W+AR + +G+
Sbjct 60 LIVLARPALKRHFLTGPNVRMNTEALLGTQAVTVSTVTSTGGQVKLAGEIWSARSIAEGE 119
Query 121 VFEPGDSVTVVQIDGATAVV 140
V EP +VTVV+I GATAVV
Sbjct 120 VIEPDTTVTVVEISGATAVV 139
>gi|334696865|gb|AEG81662.1| hypothetical protein CULC809_01129 [Corynebacterium ulcerans
809]
Length=152
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/140 (46%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
ALIWLIA + L+G E L G++ LMLG GALAA+ A P+W + F S+ L
Sbjct 13 ALIWLIAGISLIGLELLAGELTFLMLGLGALAAAAVGLADA-PLWVEATTFAATSIAFLF 71
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
+++PA+++RL + + AL G A VL + +GGQ++ DG +W+AR L+ G FE
Sbjct 72 ILKPALKKRLYKPAALDTSARALIGSAAEVLEPITGEGGQIRFDGSIWSARSLDPGHHFE 131
Query 124 PGDSVTVVQIDGATAVVFKD 143
PG SVTV++IDGATAVV+K+
Sbjct 132 PGQSVTVIEIDGATAVVWKE 151
>gi|337290752|ref|YP_004629773.1| hypothetical protein CULC22_01144 [Corynebacterium ulcerans BR-AD22]
gi|334699058|gb|AEG83854.1| hypothetical protein CULC22_01144 [Corynebacterium ulcerans BR-AD22]
Length=152
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/140 (46%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
ALIWLIA + L+G E L G++ LMLG GALAA+ A P+W + F S+ L
Sbjct 13 ALIWLIAGISLIGLELLAGELTFLMLGLGALAAAAVGLADA-PLWVEATTFAATSIAFLF 71
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
+++PA+++RL + + AL G A VL + +GGQ++ DG +W+AR L+ G FE
Sbjct 72 ILKPALKKRLYKPVALDTSARALIGSAAEVLEPITGEGGQIRFDGSIWSARSLDPGHHFE 131
Query 124 PGDSVTVVQIDGATAVVFKD 143
PG SVTV++IDGATAVV+K+
Sbjct 132 PGQSVTVIEIDGATAVVWKE 151
>gi|41407311|ref|NP_960147.1| hypothetical protein MAP1213 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395663|gb|AAS03530.1| hypothetical protein MAP_1213 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=147
Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/63 (81%), Positives = 57/63 (91%), Gaps = 0/63 (0%)
Query 80 QLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFEPGDSVTVVQIDGATAV 139
QLGI ALEGK A+VL RVARD GQVKLDGQVWTARPL++ DV+EPG+ VTV+QIDGATAV
Sbjct 82 QLGIVALEGKTALVLERVARDRGQVKLDGQVWTARPLDENDVYEPGEPVTVMQIDGATAV 141
Query 140 VFK 142
VFK
Sbjct 142 VFK 144
>gi|172041308|ref|YP_001801022.1| hypothetical protein cur_1628 [Corynebacterium urealyticum DSM
7109]
gi|171852612|emb|CAQ05588.1| hypothetical protein cu1628 [Corynebacterium urealyticum DSM
7109]
Length=139
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/138 (43%), Positives = 80/138 (58%), Gaps = 1/138 (0%)
Query 5 LIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVL 64
+IW IAALVL G E G+ LLML GGA + W A P WA F + + L++
Sbjct 1 MIWFIAALVLAGLELAAGEFTLLMLAGGATVGGLVEWAGA-PTWAAIVAFGIATAGLILF 59
Query 65 VRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFEP 124
+RP +RRRL K + +AL G A VL V GQ++LDG +W+AR ++ + F
Sbjct 60 LRPILRRRLHGPKALDTSQQALVGATAEVLEDVGARSGQIRLDGSIWSARSMDPSETFTR 119
Query 125 GDSVTVVQIDGATAVVFK 142
G+ V V+ IDG TAVV+K
Sbjct 120 GEEVHVIDIDGPTAVVWK 137
>gi|300786547|ref|YP_003766838.1| membrane protein implicated in regulation of membrane protease
activity [Amycolatopsis mediterranei U32]
gi|299796061|gb|ADJ46436.1| membrane protein implicated in regulation of membrane protease
activity [Amycolatopsis mediterranei U32]
gi|340528027|gb|AEK43232.1| membrane protein implicated in regulation of membrane protease
activity [Amycolatopsis mediterranei S699]
Length=144
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/141 (47%), Positives = 88/141 (63%), Gaps = 2/141 (1%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
AL+WLI + LV AE ++GD L+MLG AL + + L P+ D AVF + SV +L+
Sbjct 4 ALVWLIVGIALVIAEVVSGDFVLVMLGVAALFGAGAEVLTGNPV-IDVAVFAVASVGMLL 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDG-DVF 122
LVRPA++RRL GI+AL G +AVV+ V + G+VKL G VW+AR L +
Sbjct 63 LVRPALKRRLLSGPAHHTGIDALIGARAVVVSTVDAEAGRVKLAGDVWSARSLGEHLPPI 122
Query 123 EPGDSVTVVQIDGATAVVFKD 143
PG VTVV+I GATAVV +
Sbjct 123 APGTPVTVVEISGATAVVSAE 143
>gi|258652520|ref|YP_003201676.1| hypothetical protein Namu_2311 [Nakamurella multipartita DSM
44233]
gi|258555745|gb|ACV78687.1| protein of unknown function DUF107 [Nakamurella multipartita
DSM 44233]
Length=143
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/137 (45%), Positives = 82/137 (60%), Gaps = 0/137 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A IWL+ ++L AE L + LLMLGGGAL + + +W VF L SV L++
Sbjct 3 AWIWLVGGVLLSIAEVLGAEFVLLMLGGGALITAGFAAFFPELLWLQVLVFALSSVALVL 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
+RP + RR Q + GI+A+ G KA V+ V DGGQVK+ G+VW+A L+
Sbjct 63 GLRPMLLRRYYQPSQTRTGIDAIIGSKATVVSTVDADGGQVKIGGEVWSAVSLDGHRALP 122
Query 124 PGDSVTVVQIDGATAVV 140
PG SVTVV++ GATAVV
Sbjct 123 PGTSVTVVEVRGATAVV 139
>gi|134100317|ref|YP_001105978.1| membrane protein implicated in regulation of membrane protease
activity [Saccharopolyspora erythraea NRRL 2338]
gi|291008783|ref|ZP_06566756.1| membrane protein implicated in regulation of membrane protease
activity [Saccharopolyspora erythraea NRRL 2338]
gi|133912940|emb|CAM03053.1| membrane protein implicated in regulation of membrane protease
activity [Saccharopolyspora erythraea NRRL 2338]
Length=143
Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/140 (42%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
AL+WLIA +VL+ AE L+GD F+L++ G A+ + L P+ D AVF +S+ L+
Sbjct 4 ALLWLIAGVVLIAAEVLSGD-FVLVMLGAGALAAAGASALGVPLGLDAAVFAALSLGLIF 62
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
L RPA++RR+ ++ ++AL G KAVV V GG+V++ G++W+AR ++ V
Sbjct 63 LARPALKRRMRVEHELKTNVDALVGHKAVVESTVDAHGGRVRIGGELWSARAFDETQVMH 122
Query 124 PGDSVTVVQIDGATAVVFKD 143
G +VTV++I GATAVV+ +
Sbjct 123 SGQTVTVMEISGATAVVWAE 142
>gi|262202340|ref|YP_003273548.1| hypothetical protein Gbro_2413 [Gordonia bronchialis DSM 43247]
gi|262085687|gb|ACY21655.1| protein of unknown function DUF107 [Gordonia bronchialis DSM
43247]
Length=141
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 85/126 (68%), Gaps = 1/126 (0%)
Query 17 AEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVLVRPAVRRRLTQT 76
AE G++FLLML GGA+ A+ ++ L A P+W + VF L+SVLLLV VRP +R +
Sbjct 16 AEMFGGELFLLMLAGGAVGAAGAALLGA-PVWLEVVVFALISVLLLVGVRPVAKRHMLSR 74
Query 77 KGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFEPGDSVTVVQIDGA 136
V EALEG+ A+V +V G+VK+DG VW+AR +N G+V G+ V VVQIDGA
Sbjct 75 PRVLTNTEALEGRHAIVTEQVDDHDGRVKIDGDVWSARSMNPGEVIAAGEQVMVVQIDGA 134
Query 137 TAVVFK 142
TAVV++
Sbjct 135 TAVVWR 140
>gi|25028211|ref|NP_738265.1| hypothetical protein CE1655 [Corynebacterium efficiens YS-314]
gi|259507270|ref|ZP_05750170.1| membrane protein implicated in regulation of membrane protease
activity [Corynebacterium efficiens YS-314]
gi|23493495|dbj|BAC18465.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165144|gb|EEW49698.1| membrane protein implicated in regulation of membrane protease
activity [Corynebacterium efficiens YS-314]
Length=145
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/140 (45%), Positives = 90/140 (65%), Gaps = 1/140 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A+IW I +LVL G E G+ LLML G ALA + S L+ P+WA+ A F + + LL
Sbjct 6 AIIWFIGSLVLAGLELAVGEFTLLMLAGAALATAGVS-LVGVPVWAEFATFAVSAFALLF 64
Query 64 LVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFE 123
++PA++RRL + + + +L GK+AVVL V GGQ++LDG +W+AR ++ F
Sbjct 65 FLKPALQRRLNKPAALDTSVRSLVGKQAVVLEDVTGAGGQIRLDGSIWSARSMDPAHTFT 124
Query 124 PGDSVTVVQIDGATAVVFKD 143
G V+VV+IDGATAVV+ +
Sbjct 125 EGQHVSVVRIDGATAVVWAE 144
>gi|145595537|ref|YP_001159834.1| hypothetical protein Strop_3019 [Salinispora tropica CNB-440]
gi|145304874|gb|ABP55456.1| protein of unknown function DUF107 [Salinispora tropica CNB-440]
Length=167
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/142 (46%), Positives = 90/142 (64%), Gaps = 3/142 (2%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A++W++ +VL AE T +FL+M GA AA+ ++ L A P+ VF +VS L L+
Sbjct 14 AVLWIVVGVVLAVAEIFTTTLFLIMFAVGAFAAAGAAALGA-PVEIQAVVFAVVSALTLL 72
Query 64 LVRPAVRRR--LTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDV 121
RPA+RRR LT T+ G+ A+EG A+VL RV D G VK+DG++W AR + V
Sbjct 73 GARPALRRRTTLTSTEDRAFGVGAIEGNTALVLERVDADNGLVKIDGELWQARSYDATQV 132
Query 122 FEPGDSVTVVQIDGATAVVFKD 143
F PGD V V+Q+ GATA V++D
Sbjct 133 FAPGDRVQVIQVRGATAQVWRD 154
>gi|319950153|ref|ZP_08024089.1| hypothetical protein ES5_11336 [Dietzia cinnamea P4]
gi|319436194|gb|EFV91378.1| hypothetical protein ES5_11336 [Dietzia cinnamea P4]
Length=144
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/143 (46%), Positives = 88/143 (62%), Gaps = 2/143 (1%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
M V WL AA++L EA G++F+LML GGAL S +++L A P+W F LVS++
Sbjct 1 MHVGFAWLGAAVLLAAGEAAGGELFMLMLAGGALGGSAAAFLGA-PVWGQALAFALVSLI 59
Query 61 LLVLVRPAVRRRL-TQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDG 119
L+V VRP VRRRL + AL G+ V+ + GG V++ G WTARPL +G
Sbjct 60 LVVGVRPLVRRRLLSALPEHDTNTAALTGRGGTVVEAIGPSGGLVEIAGDTWTARPLIEG 119
Query 120 DVFEPGDSVTVVQIDGATAVVFK 142
+ FE GD V V QI+GATA+V +
Sbjct 120 ETFEAGDKVLVHQIEGATAIVVR 142
>gi|300781171|ref|ZP_07091025.1| membrane protein [Corynebacterium genitalium ATCC 33030]
gi|300532878|gb|EFK53939.1| membrane protein [Corynebacterium genitalium ATCC 33030]
Length=143
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/139 (42%), Positives = 82/139 (59%), Gaps = 1/139 (0%)
Query 5 LIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVL 64
+IWLI LVL G E G+ LML GGA + +S L P+WA+ +F L S L++
Sbjct 6 VIWLIGTLVLAGLELAAGEFTFLMLAGGAAVTAGAS-LFGLPVWAEIVIFGLSSAALILF 64
Query 65 VRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFEP 124
+RP + RR ++ + + +AL G KA VL + GQV+LDG +W+AR ++ V
Sbjct 65 LRPWLHRRYSKPRALDTSPKALVGSKAHVLEDITPSSGQVRLDGSIWSARAIDPAHVIAA 124
Query 125 GDSVTVVQIDGATAVVFKD 143
G+ V V IDG TAVV+K+
Sbjct 125 GEHVIVADIDGPTAVVWKE 143
>gi|159038787|ref|YP_001538040.1| hypothetical protein Sare_3245 [Salinispora arenicola CNS-205]
gi|157917622|gb|ABV99049.1| protein of unknown function DUF107 [Salinispora arenicola CNS-205]
Length=156
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/142 (43%), Positives = 90/142 (64%), Gaps = 3/142 (2%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A++W++ +VL AE T +FL+M GA AA+ ++ + A P+ VF +VS L ++
Sbjct 3 AVLWIVVGVVLAIAEIFTTTLFLIMFAVGAFAAAGAAAIGA-PVEIQAVVFAVVSALTVL 61
Query 64 LVRPAVRRRLT--QTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDV 121
RPA+RRR+T T G+ A+EG A+VL RV D G VK+DG++W AR + V
Sbjct 62 GARPALRRRITLASTDDSPFGVGAIEGSAALVLERVDVDHGLVKIDGELWQARSYDATQV 121
Query 122 FEPGDSVTVVQIDGATAVVFKD 143
F PGD V V+Q+ GATA+V++D
Sbjct 122 FVPGDRVQVIQVRGATALVWRD 143
>gi|296139798|ref|YP_003647041.1| hypothetical protein Tpau_2090 [Tsukamurella paurometabola DSM
20162]
gi|296027932|gb|ADG78702.1| protein of unknown function DUF107 [Tsukamurella paurometabola
DSM 20162]
Length=143
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/138 (46%), Positives = 84/138 (61%), Gaps = 1/138 (0%)
Query 4 ALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLV 63
A +WLI A++L AE G+ LLMLGGGAL + ++ L P+WA G VF + SVLLLV
Sbjct 3 AALWLIGAVLLAVAETAAGEFTLLMLGGGALITAGATGLFTLPLWAQGVVFAVSSVLLLV 62
Query 64 LVRPAVRRRLTQTKG-VQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVF 122
L RP +RR + + +E+L G KAVV V GG+V + G+ W+AR DG
Sbjct 63 LARPPLRRYVEARRADAPSYLESLPGMKAVVSAEVTGGGGRVLVGGEEWSARTPYDGAPI 122
Query 123 EPGDSVTVVQIDGATAVV 140
G VT+V+IDGA A+V
Sbjct 123 PAGVEVTIVEIDGAVAIV 140
>gi|239986757|ref|ZP_04707421.1| hypothetical protein SrosN1_05563 [Streptomyces roseosporus NRRL
11379]
gi|291443709|ref|ZP_06583099.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291346656|gb|EFE73560.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length=142
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/90 (58%), Positives = 65/90 (73%), Gaps = 2/90 (2%)
Query 53 VFLLVSVLLLVLVRP-AVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVW 111
VF+LVSV L+ +VRP A R R QT G GI+AL+G++A VL RV+ DGG++KL G+VW
Sbjct 54 VFVLVSVALIAVVRPIAARHRAGQT-GQASGIDALKGRQAAVLERVSADGGRIKLAGEVW 112
Query 112 TARPLNDGDVFEPGDSVTVVQIDGATAVVF 141
+AR + VFEPG V VV IDGATAVV
Sbjct 113 SARSYDADQVFEPGTQVDVVDIDGATAVVM 142
>gi|117928362|ref|YP_872913.1| hypothetical protein Acel_1155 [Acidothermus cellulolyticus 11B]
gi|117648825|gb|ABK52927.1| protein of unknown function DUF107 [Acidothermus cellulolyticus
11B]
Length=143
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/141 (42%), Positives = 85/141 (61%), Gaps = 1/141 (0%)
Query 1 MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVL 60
MP+ LIW I A+ GAEALT + L + A V++ L A P+ A VF+ +
Sbjct 1 MPMWLIWTIVAVACAGAEALTLTLILGFIAAAAALTLVAAVLGA-PIVAQLLVFVGSAAA 59
Query 61 LLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGD 120
LL +VRP R L ++ G++AL G++ +V+ RV GQ+K+ G++W+ARP DG
Sbjct 60 LLGVVRPIARAHLYTPPALRTGVDALVGQRGLVVERVDAHHGQIKIGGELWSARPYVDGQ 119
Query 121 VFEPGDSVTVVQIDGATAVVF 141
+EPG +V VV+I GA A+VF
Sbjct 120 CYEPGTTVEVVKIQGAIALVF 140
>gi|326773521|ref|ZP_08232804.1| integral membrane protein [Actinomyces viscosus C505]
gi|326636751|gb|EGE37654.1| integral membrane protein [Actinomyces viscosus C505]
Length=155
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/141 (47%), Positives = 87/141 (62%), Gaps = 6/141 (4%)
Query 5 LIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVL 64
L W+ AL+LV E +T D+ LM+ GGAL ++S L P+WA VF VS LLL
Sbjct 4 LFWVAGALLLVVIETMTADLTFLMIAGGALGGGLTS-FLGGPVWAQVVVFACVSTLLLFA 62
Query 65 VRPAVRRRLTQ-TKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTAR--PLNDGDV 121
VRP +RRL T ++ ++AL G+ AV + V R+GG+V+L G+ W+AR P+ G +
Sbjct 63 VRPWAKRRLAAATPQMKTNVDALIGRSAVTITPVDREGGRVRLGGEEWSARLAPVAQGGL 122
Query 122 --FEPGDSVTVVQIDGATAVV 140
E G SVTV QIDGA AVV
Sbjct 123 TSLEAGVSVTVAQIDGAVAVV 143
>gi|302533684|ref|ZP_07286026.1| integral membrane protein [Streptomyces sp. C]
gi|302442579|gb|EFL14395.1| integral membrane protein [Streptomyces sp. C]
Length=142
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/88 (54%), Positives = 60/88 (69%), Gaps = 0/88 (0%)
Query 54 FLLVSVLLLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTA 113
F++VSV L+ +VRP R Q + GIEAL+G+ AVVL RV GG++KL G++W+A
Sbjct 55 FVIVSVALIAVVRPIANRHRDQRPQHRSGIEALKGRSAVVLERVDGSGGRIKLAGEIWSA 114
Query 114 RPLNDGDVFEPGDSVTVVQIDGATAVVF 141
R L+ FEPG SV VV IDGATAVV
Sbjct 115 RTLDSDTSFEPGQSVDVVDIDGATAVVM 142
Lambda K H
0.324 0.140 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128702269584
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40