BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1489A Length=76 Score E Sequences producing significant alignments: (Bits) Value gi|15840951|ref|NP_335988.1| hypothetical protein MT1535 [Mycoba... 147 5e-34 gi|298524999|ref|ZP_07012408.1| conserved hypothetical protein [... 125 2e-27 gi|289574171|ref|ZP_06454398.1| conserved hypothetical protein [... 123 7e-27 gi|340626505|ref|YP_004744957.1| hypothetical protein MCAN_15071... 120 6e-26 gi|145224233|ref|YP_001134911.1| methylmalonyl-CoA mutase [Mycob... 82.8 1e-14 gi|315444568|ref|YP_004077447.1| methylmalonyl-CoA mutase [Mycob... 82.8 2e-14 gi|169629795|ref|YP_001703444.1| methylmalonyl-CoA mutase [Mycob... 82.0 2e-14 gi|118472812|ref|YP_887474.1| methylmalonyl-CoA mutase [Mycobact... 81.6 3e-14 gi|289745245|ref|ZP_06504623.1| methylmalonyl-CoA mutase [Mycoba... 81.6 4e-14 gi|15608631|ref|NP_216009.1| methylmalonyl-CoA mutase [Mycobacte... 81.6 4e-14 gi|289569520|ref|ZP_06449747.1| methylmalonyl-CoA mutase large s... 80.9 6e-14 gi|339294469|gb|AEJ46580.1| methylmalonyl-CoA mutase [Mycobacter... 80.9 6e-14 gi|333990861|ref|YP_004523475.1| methylmalonyl-CoA mutase large ... 80.5 7e-14 gi|108800088|ref|YP_640285.1| methylmalonyl-CoA mutase [Mycobact... 80.5 7e-14 gi|126435712|ref|YP_001071403.1| methylmalonyl-CoA mutase [Mycob... 80.5 7e-14 gi|240167875|ref|ZP_04746534.1| methylmalonyl-CoA mutase [Mycoba... 80.1 9e-14 gi|254775724|ref|ZP_05217240.1| methylmalonyl-CoA mutase [Mycoba... 79.7 1e-13 gi|289750055|ref|ZP_06509433.1| methylmalonyl-CoA mutase large s... 79.3 2e-13 gi|41407324|ref|NP_960160.1| methylmalonyl-CoA mutase [Mycobacte... 77.0 1e-12 gi|254819569|ref|ZP_05224570.1| methylmalonyl-CoA mutase [Mycoba... 76.6 1e-12 gi|342858789|ref|ZP_08715444.1| methylmalonyl-CoA mutase [Mycoba... 75.9 2e-12 gi|296170635|ref|ZP_06852211.1| methylmalonyl-CoA mutase [Mycoba... 75.5 3e-12 gi|183982316|ref|YP_001850607.1| methylmalonyl-CoA mutase large ... 73.9 8e-12 gi|118617166|ref|YP_905498.1| methylmalonyl-CoA mutase [Mycobact... 73.6 8e-12 gi|120403747|ref|YP_953576.1| methylmalonyl-CoA mutase [Mycobact... 69.7 1e-10 gi|343927975|ref|ZP_08767441.1| methylmalonyl-CoA mutase large s... 66.6 1e-09 gi|326382247|ref|ZP_08203939.1| methylmalonyl-CoA mutase [Gordon... 66.6 1e-09 gi|262202347|ref|YP_003273555.1| methylmalonyl-CoA mutase large ... 65.9 2e-09 gi|296139813|ref|YP_003647056.1| methylmalonyl-CoA mutase, large... 64.7 4e-09 gi|54025436|ref|YP_119678.1| methylmalonyl-CoA mutase [Nocardia ... 64.7 5e-09 gi|111024184|ref|YP_707156.1| methylmalonyl-CoA mutase [Rhodococ... 63.5 9e-09 gi|15827958|ref|NP_302221.1| methylmalonyl-CoA mutase [Mycobacte... 63.5 1e-08 gi|312139663|ref|YP_004006999.1| methylmalonyl-CoA mutase b12 bi... 62.8 2e-08 gi|325676890|ref|ZP_08156563.1| methylmalonyl-CoA mutase [Rhodoc... 62.4 2e-08 gi|319949212|ref|ZP_08023299.1| methylmalonyl-CoA mutase [Dietzi... 57.8 6e-07 gi|229493576|ref|ZP_04387361.1| methylmalonyl-CoA mutase domain ... 55.8 2e-06 gi|226306576|ref|YP_002766536.1| methylmalonyl-CoA mutase large ... 55.8 2e-06 gi|256380405|ref|YP_003104065.1| methylmalonyl-CoA mutase [Actin... 53.9 8e-06 gi|38233857|ref|NP_939624.1| methylmalonyl-CoA mutase [Corynebac... 52.0 3e-05 gi|226366427|ref|YP_002784210.1| methylmalonyl-CoA mutase [Rhodo... 52.0 3e-05 gi|227488913|ref|ZP_03919229.1| methylmalonyl-CoA mutase [Coryne... 51.2 5e-05 gi|237785520|ref|YP_002906225.1| methylmalonyl-CoA mutase [Coryn... 50.8 6e-05 gi|333919601|ref|YP_004493182.1| methylmalonyl-CoA mutase large ... 50.8 6e-05 gi|294633372|ref|ZP_06711931.1| methylmalonyl-CoA mutase, alpha ... 50.1 1e-04 gi|110633213|ref|YP_673421.1| methylmalonyl-CoA mutase [Mesorhiz... 49.7 2e-04 gi|331696936|ref|YP_004333175.1| methylmalonyl-CoA mutase large ... 48.9 3e-04 gi|288922909|ref|ZP_06417070.1| methylmalonyl-CoA mutase, large ... 48.5 3e-04 gi|320163677|gb|EFW40576.1| methylmalonyl Coenzyme A mutase [Cap... 48.1 4e-04 gi|83945198|ref|ZP_00957547.1| methylmalonyl-CoA mutase [Oceanic... 48.1 5e-04 gi|163848059|ref|YP_001636103.1| methylmalonyl-CoA mutase [Chlor... 47.8 5e-04 >gi|15840951|ref|NP_335988.1| hypothetical protein MT1535 [Mycobacterium tuberculosis CDC1551] gi|31792685|ref|NP_855178.1| hypothetical protein Mb1526 [Mycobacterium bovis AF2122/97] gi|57116876|ref|YP_177646.1| hypothetical protein Rv1489A [Mycobacterium tuberculosis H37Rv] 50 more sequence titles Length=76 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 75/76 (99%), Positives = 76/76 (100%), Gaps = 0/76 (0%) Query 1 VSVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN 60 +SVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN Sbjct 1 MSVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN 60 Query 61 NLMAPGPPHSLLGRDR 76 NLMAPGPPHSLLGRDR Sbjct 61 NLMAPGPPHSLLGRDR 76 >gi|298524999|ref|ZP_07012408.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494793|gb|EFI30087.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=76 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/76 (98%), Positives = 75/76 (99%), Gaps = 0/76 (0%) Query 1 VSVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN 60 +SVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARG AGTSGLGN Sbjct 1 MSVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGWAGTSGLGN 60 Query 61 NLMAPGPPHSLLGRDR 76 NLMAPGPPHSLLGRDR Sbjct 61 NLMAPGPPHSLLGRDR 76 >gi|289574171|ref|ZP_06454398.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339631558|ref|YP_004723200.1| hypothetical protein MAF_15130 [Mycobacterium africanum GM041182] gi|289538602|gb|EFD43180.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|339330914|emb|CCC26585.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=76 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 74/76 (98%), Positives = 76/76 (100%), Gaps = 0/76 (0%) Query 1 VSVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN 60 +SVGEVEVLKVENSRVRAEQLA+LYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN Sbjct 1 MSVGEVEVLKVENSRVRAEQLAELYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN 60 Query 61 NLMAPGPPHSLLGRDR 76 NLMAPGPPHSLLGRDR Sbjct 61 NLMAPGPPHSLLGRDR 76 >gi|340626505|ref|YP_004744957.1| hypothetical protein MCAN_15071 [Mycobacterium canettii CIPT 140010059] gi|340004695|emb|CCC43839.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=77 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 75/77 (98%), Positives = 76/77 (99%), Gaps = 1/77 (1%) Query 1 VSVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN 60 +SVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN Sbjct 1 MSVGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGN 60 Query 61 NLMAPG-PPHSLLGRDR 76 NLMAPG PPHSLLGRDR Sbjct 61 NLMAPGPPPHSLLGRDR 77 >gi|145224233|ref|YP_001134911.1| methylmalonyl-CoA mutase [Mycobacterium gilvum PYR-GCK] gi|145216719|gb|ABP46123.1| methylmalonyl-CoA mutase [Mycobacterium gilvum PYR-GCK] Length=752 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/60 (74%), Positives = 47/60 (79%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL LR RD AALAEL+RAAAA G AG GLGNNL+A Sbjct 495 EIEVLKVENSRVRAEQLAKLERLRRERDETATQAALAELTRAAAASGVAGEDGLGNNLLA 554 >gi|315444568|ref|YP_004077447.1| methylmalonyl-CoA mutase [Mycobacterium sp. Spyr1] gi|315262871|gb|ADT99612.1| methylmalonyl-CoA mutase [Mycobacterium sp. Spyr1] Length=752 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/60 (74%), Positives = 47/60 (79%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL LR RD AALAEL+RAAAA G AG GLGNNL+A Sbjct 495 EIEVLKVENSRVRAEQLAKLERLRRERDETATQAALAELTRAAAASGVAGEDGLGNNLLA 554 >gi|169629795|ref|YP_001703444.1| methylmalonyl-CoA mutase [Mycobacterium abscessus ATCC 19977] gi|169241762|emb|CAM62790.1| Probable methylmalonyl-CoA mutase large subunit MutB [Mycobacterium abscessus] Length=759 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/60 (74%), Positives = 49/60 (82%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 ++EVLKVENSRVRAEQLAKL +LR+ RD V AALAEL+RAAA G AG GLGNNLMA Sbjct 499 QIEVLKVENSRVRAEQLAKLQQLRAERDDDAVQAALAELTRAAADSGRAGEDGLGNNLMA 558 >gi|118472812|ref|YP_887474.1| methylmalonyl-CoA mutase [Mycobacterium smegmatis str. MC2 155] gi|118174099|gb|ABK74995.1| methylmalonyl-CoA mutase large subunit [Mycobacterium smegmatis str. MC2 155] Length=751 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQ+AKL +LR+ RD AAL EL+RAAAA G AG GLGNNL+A Sbjct 494 EIEVLKVENSRVRAEQIAKLQQLRAERDEAATQAALDELTRAAAASGPAGEDGLGNNLLA 553 >gi|289745245|ref|ZP_06504623.1| methylmalonyl-CoA mutase [Mycobacterium tuberculosis 02_1987] gi|289685773|gb|EFD53261.1| methylmalonyl-CoA mutase [Mycobacterium tuberculosis 02_1987] Length=750 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/60 (74%), Positives = 49/60 (82%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL LR+ RD V AALAEL+RAAA +G AG GLGNNL+A Sbjct 493 EIEVLKVENSRVRAEQLAKLQRLRAGRDEPAVRAALAELTRAAAEQGRAGADGLGNNLLA 552 >gi|15608631|ref|NP_216009.1| methylmalonyl-CoA mutase [Mycobacterium tuberculosis H37Rv] gi|15840956|ref|NP_335993.1| methylmalonyl-CoA mutase [Mycobacterium tuberculosis CDC1551] gi|31792689|ref|NP_855182.1| methylmalonyl-CoA mutase [Mycobacterium bovis AF2122/97] 67 more sequence titles Length=750 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/60 (74%), Positives = 49/60 (82%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL LR+ RD V AALAEL+RAAA +G AG GLGNNL+A Sbjct 493 EIEVLKVENSRVRAEQLAKLQRLRAGRDEPAVRAALAELTRAAAEQGRAGADGLGNNLLA 552 >gi|289569520|ref|ZP_06449747.1| methylmalonyl-CoA mutase large subunit mutB [Mycobacterium tuberculosis T17] gi|289543274|gb|EFD46922.1| methylmalonyl-CoA mutase large subunit mutB [Mycobacterium tuberculosis T17] Length=399 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/60 (74%), Positives = 49/60 (82%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL LR+ RD V AALAEL+RAAA +G AG GLGNNL+A Sbjct 142 EIEVLKVENSRVRAEQLAKLQRLRAGRDEPAVRAALAELTRAAAEQGRAGADGLGNNLLA 201 >gi|339294469|gb|AEJ46580.1| methylmalonyl-CoA mutase [Mycobacterium tuberculosis CCDC5079] Length=326 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/60 (74%), Positives = 49/60 (82%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL LR+ RD V AALAEL+RAAA +G AG GLGNNL+A Sbjct 69 EIEVLKVENSRVRAEQLAKLQRLRAGRDEPAVRAALAELTRAAAEQGRAGADGLGNNLLA 128 >gi|333990861|ref|YP_004523475.1| methylmalonyl-CoA mutase large subunit MutB [Mycobacterium sp. JDM601] gi|333486829|gb|AEF36221.1| methylmalonyl-CoA mutase large subunit MutB [Mycobacterium sp. JDM601] Length=772 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 41/60 (69%), Positives = 47/60 (79%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL +LR+ RD AAL EL+RAA +G AG GLGNNL+A Sbjct 498 EIEVLKVENSRVRAEQLAKLEQLRAERDETACQAALDELTRAAGTQGAAGEDGLGNNLLA 557 >gi|108800088|ref|YP_640285.1| methylmalonyl-CoA mutase [Mycobacterium sp. MCS] gi|119869215|ref|YP_939167.1| methylmalonyl-CoA mutase [Mycobacterium sp. KMS] gi|108770507|gb|ABG09229.1| methylmalonyl-CoA mutase [Mycobacterium sp. MCS] gi|119695304|gb|ABL92377.1| methylmalonyl-CoA mutase [Mycobacterium sp. KMS] Length=760 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL +LR+ RD AAL EL+RAA A+G AG GLGNNL+A Sbjct 502 EIEVLKVENSRVRAEQLAKLQQLRADRDEDATRAALDELTRAAGAQGSAGEDGLGNNLLA 561 >gi|126435712|ref|YP_001071403.1| methylmalonyl-CoA mutase [Mycobacterium sp. JLS] gi|126235512|gb|ABN98912.1| methylmalonyl-CoA mutase [Mycobacterium sp. JLS] Length=760 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL +LR+ RD AAL EL+RAA A+G AG GLGNNL+A Sbjct 502 EIEVLKVENSRVRAEQLAKLQQLRADRDEDATRAALDELTRAAGAQGSAGEDGLGNNLLA 561 >gi|240167875|ref|ZP_04746534.1| methylmalonyl-CoA mutase [Mycobacterium kansasii ATCC 12478] Length=750 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 41/60 (69%), Positives = 50/60 (84%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 ++EVLKV+NSRVR+EQLAKL ELR+ RD+ V AAL EL+RAA+A G AG GLGNNL+A Sbjct 493 QIEVLKVDNSRVRSEQLAKLRELRAGRDQAAVAAALGELTRAASAHGRAGQDGLGNNLLA 552 >gi|254775724|ref|ZP_05217240.1| methylmalonyl-CoA mutase [Mycobacterium avium subsp. avium ATCC 25291] Length=750 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/61 (84%), Positives = 54/61 (89%), Gaps = 0/61 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 EVEVLKVENSRVRAEQLAKL ELR SRD+ VDAALAELSRAAAA+G AG GLGNNL+A Sbjct 493 EVEVLKVENSRVRAEQLAKLKELRDSRDQSAVDAALAELSRAAAAQGRAGEDGLGNNLLA 552 Query 65 P 65 P Sbjct 553 P 553 >gi|289750055|ref|ZP_06509433.1| methylmalonyl-CoA mutase large subunit mutB [Mycobacterium tuberculosis T92] gi|289690642|gb|EFD58071.1| methylmalonyl-CoA mutase large subunit mutB [Mycobacterium tuberculosis T92] Length=750 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/60 (72%), Positives = 48/60 (80%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQLAKL LR+ RD V AALAEL+RA A +G AG GLGNNL+A Sbjct 493 EIEVLKVENSRVRAEQLAKLQRLRAGRDEPAVRAALAELTRADAEQGRAGADGLGNNLLA 552 >gi|41407324|ref|NP_960160.1| methylmalonyl-CoA mutase [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464912|ref|YP_882459.1| methylmalonyl-CoA mutase [Mycobacterium avium 104] gi|41395676|gb|AAS03543.1| MutB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166199|gb|ABK67096.1| methylmalonyl-CoA mutase large subunit [Mycobacterium avium 104] gi|336458054|gb|EGO37041.1| methylmalonyl-CoA mutase [Mycobacterium avium subsp. paratuberculosis S397] Length=750 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/60 (84%), Positives = 53/60 (89%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 EVEVLKVENSRVRAEQLAKL ELR SRD+ VDAALAELSRAAAA+G AG GLGNNL+A Sbjct 493 EVEVLKVENSRVRAEQLAKLKELRDSRDQSAVDAALAELSRAAAAQGRAGEDGLGNNLLA 552 >gi|254819569|ref|ZP_05224570.1| methylmalonyl-CoA mutase [Mycobacterium intracellulare ATCC 13950] Length=749 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/60 (84%), Positives = 52/60 (87%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 EVEVLKVENSRVRAEQLAKL ELR SRD+ VDAALAELSRAAAA G AG GLGNNL+A Sbjct 493 EVEVLKVENSRVRAEQLAKLKELRESRDQQAVDAALAELSRAAAAHGRAGEDGLGNNLLA 552 >gi|342858789|ref|ZP_08715444.1| methylmalonyl-CoA mutase [Mycobacterium colombiense CECT 3035] gi|342134493|gb|EGT87673.1| methylmalonyl-CoA mutase [Mycobacterium colombiense CECT 3035] Length=750 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/60 (82%), Positives = 52/60 (87%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 EVEVLKVENSRVRAEQLAKL ELR +RD+ VDAALAELSRAAAA G AG GLGNNL+A Sbjct 493 EVEVLKVENSRVRAEQLAKLKELRDTRDQSVVDAALAELSRAAAAHGRAGEDGLGNNLLA 552 >gi|296170635|ref|ZP_06852211.1| methylmalonyl-CoA mutase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894726|gb|EFG74459.1| methylmalonyl-CoA mutase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=750 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/60 (82%), Positives = 53/60 (89%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 EVEVLKVENSRVRAEQLAKL ELR+SRD+ V+AALAELSRAAAA G AG GLGNNL+A Sbjct 493 EVEVLKVENSRVRAEQLAKLQELRASRDQPAVEAALAELSRAAAAHGRAGEDGLGNNLLA 552 >gi|183982316|ref|YP_001850607.1| methylmalonyl-CoA mutase large subunit, MutB [Mycobacterium marinum M] gi|183175642|gb|ACC40752.1| methylmalonyl-CoA mutase large subunit, MutB [Mycobacterium marinum M] Length=753 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 46/60 (77%), Positives = 52/60 (87%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 ++EVLKVENSRVRAEQLAKL ELR+ RD+ VDAALAEL+RAAAA G AG GLGNNL+A Sbjct 493 QIEVLKVENSRVRAEQLAKLQELRAGRDQAAVDAALAELTRAAAAHGRAGDDGLGNNLLA 552 >gi|118617166|ref|YP_905498.1| methylmalonyl-CoA mutase [Mycobacterium ulcerans Agy99] gi|118569276|gb|ABL04027.1| methylmalonyl-CoA mutase large subunit, MutB [Mycobacterium ulcerans Agy99] Length=753 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 46/60 (77%), Positives = 52/60 (87%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 ++EVLKVENSRVRAEQLAKL ELR+ RD+ VDAALAEL+RAAAA G AG GLGNNL+A Sbjct 493 QIEVLKVENSRVRAEQLAKLQELRAGRDQAAVDAALAELTRAAAAHGRAGDDGLGNNLLA 552 >gi|120403747|ref|YP_953576.1| methylmalonyl-CoA mutase [Mycobacterium vanbaalenii PYR-1] gi|119956565|gb|ABM13570.1| methylmalonyl-CoA mutase [Mycobacterium vanbaalenii PYR-1] Length=751 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/60 (74%), Positives = 48/60 (80%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVRAEQ+AKL LRS RD AALAEL+RAAAA G AG GLGNNL+A Sbjct 494 EIEVLKVENSRVRAEQIAKLERLRSERDDAATQAALAELTRAAAASGAAGEDGLGNNLLA 553 >gi|343927975|ref|ZP_08767441.1| methylmalonyl-CoA mutase large subunit [Gordonia alkanivorans NBRC 16433] gi|343762198|dbj|GAA14367.1| methylmalonyl-CoA mutase large subunit [Gordonia alkanivorans NBRC 16433] Length=761 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/60 (62%), Positives = 45/60 (75%), Gaps = 4/60 (6%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENS+VRAEQL KL LR+ RD V+AALA+L+RAAA + G+ NNLMA Sbjct 503 EIEVLKVENSKVRAEQLEKLNTLRTQRDSAAVEAALADLTRAAA----SSEGGMENNLMA 558 >gi|326382247|ref|ZP_08203939.1| methylmalonyl-CoA mutase [Gordonia neofelifaecis NRRL B-59395] gi|326198977|gb|EGD56159.1| methylmalonyl-CoA mutase [Gordonia neofelifaecis NRRL B-59395] Length=748 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/60 (64%), Positives = 45/60 (75%), Gaps = 3/60 (5%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKV+NS+VRAEQLAKL +LR+ RD V+ ALA L+RAAA G S L NNLMA Sbjct 489 EIEVLKVDNSKVRAEQLAKLEKLRAERDSAAVETALANLTRAAAEPGG---SDLDNNLMA 545 >gi|262202347|ref|YP_003273555.1| methylmalonyl-CoA mutase large subunit [Gordonia bronchialis DSM 43247] gi|262085694|gb|ACY21662.1| methylmalonyl-CoA mutase, large subunit [Gordonia bronchialis DSM 43247] Length=763 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/60 (62%), Positives = 44/60 (74%), Gaps = 4/60 (6%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENS+VRAEQL KL LR+ RD+ VD AL +L+RAAA + GL NNLMA Sbjct 505 EIEVLKVENSKVRAEQLEKLERLRAQRDQAAVDKALEDLTRAAA----SSDGGLENNLMA 560 >gi|296139813|ref|YP_003647056.1| methylmalonyl-CoA mutase, large subunit [Tsukamurella paurometabola DSM 20162] gi|296027947|gb|ADG78717.1| methylmalonyl-CoA mutase, large subunit [Tsukamurella paurometabola DSM 20162] Length=745 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/60 (62%), Positives = 44/60 (74%), Gaps = 4/60 (6%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+E+LKVENSRVRAEQLAKL +LR+ R+ V AALA LSRAA + GL NNL+A Sbjct 492 EIEILKVENSRVRAEQLAKLEQLRAERNDAEVSAALANLSRAAG----SSEGGLENNLLA 547 >gi|54025436|ref|YP_119678.1| methylmalonyl-CoA mutase [Nocardia farcinica IFM 10152] gi|54016944|dbj|BAD58314.1| putative methylmalonyl-CoA mutase alpha subunit [Nocardia farcinica IFM 10152] Length=760 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/59 (65%), Positives = 44/59 (75%), Gaps = 4/59 (6%) Query 6 VEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 VEVLKVENSRVRAEQ+ KL LR+ RD+ VD ALAEL+RAAAA G+ NNL+A Sbjct 503 VEVLKVENSRVRAEQIEKLRRLRAERDQDAVDRALAELTRAAAAT----QGGMENNLLA 557 >gi|111024184|ref|YP_707156.1| methylmalonyl-CoA mutase [Rhodococcus jostii RHA1] gi|110823714|gb|ABG98998.1| methylmalonyl-CoA mutase large subunit [Rhodococcus jostii RHA1] Length=763 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/65 (60%), Positives = 44/65 (68%), Gaps = 5/65 (7%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAA-----ARGCAGTSGLG 59 E+EVLKVENSRVR EQL KL LR+ RD V+AALAELSRAAA A G + Sbjct 497 EIEVLKVENSRVRKEQLEKLDRLRADRDSDAVEAALAELSRAAATTEAGASEATGHVSME 556 Query 60 NNLMA 64 NNL+A Sbjct 557 NNLLA 561 >gi|15827958|ref|NP_302221.1| methylmalonyl-CoA mutase [Mycobacterium leprae TN] gi|221230435|ref|YP_002503851.1| methylmalonyl-CoA mutase [Mycobacterium leprae Br4923] gi|13093511|emb|CAC30752.1| methylmalonyl-CoA mutase, [alpha] subunit [Mycobacterium leprae] gi|219933542|emb|CAR71894.1| methylmalonyl-CoA mutase, [alpha] subunit [Mycobacterium leprae Br4923] Length=758 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/40 (78%), Positives = 38/40 (95%), Gaps = 0/40 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELS 44 E+EVLKVENSRVRAEQ+AKL +LR++RD++ VDAALAELS Sbjct 503 EIEVLKVENSRVRAEQVAKLQQLRANRDQLAVDAALAELS 542 >gi|312139663|ref|YP_004006999.1| methylmalonyl-CoA mutase b12 binding subunit mutb [Rhodococcus equi 103S] gi|311889002|emb|CBH48315.1| methylmalonyl-CoA mutase B12 binding subunit MutB [Rhodococcus equi 103S] Length=753 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/59 (56%), Positives = 44/59 (75%), Gaps = 4/59 (6%) Query 6 VEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 +EVLKV+N++VRAEQ+AKL +LR+ RD AALAEL+RAAA+ G+ NNL+A Sbjct 498 IEVLKVDNTKVRAEQIAKLQQLRAERDEAATQAALAELTRAAASN----EGGMENNLLA 552 >gi|325676890|ref|ZP_08156563.1| methylmalonyl-CoA mutase [Rhodococcus equi ATCC 33707] gi|325552438|gb|EGD22127.1| methylmalonyl-CoA mutase [Rhodococcus equi ATCC 33707] Length=759 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/59 (56%), Positives = 44/59 (75%), Gaps = 4/59 (6%) Query 6 VEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 +EVLKV+N++VRAEQ+AKL +LR+ RD AALAEL+RAAA+ G+ NNL+A Sbjct 504 IEVLKVDNTKVRAEQIAKLQQLRAERDEAATQAALAELTRAAAST----EGGMENNLLA 558 >gi|319949212|ref|ZP_08023299.1| methylmalonyl-CoA mutase [Dietzia cinnamea P4] gi|319437126|gb|EFV92159.1| methylmalonyl-CoA mutase [Dietzia cinnamea P4] Length=757 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/60 (57%), Positives = 43/60 (72%), Gaps = 3/60 (5%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKV+NSRVR+EQLAKL +LR+ RD AALA L+ AA+ +S L NNL+A Sbjct 491 EIEVLKVDNSRVRSEQLAKLEKLRAERDEDACQAALARLTEAASG---GPSSDLENNLLA 547 >gi|229493576|ref|ZP_04387361.1| methylmalonyl-CoA mutase domain protein [Rhodococcus erythropolis SK121] gi|229319537|gb|EEN85373.1| methylmalonyl-CoA mutase domain protein [Rhodococcus erythropolis SK121] Length=750 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/59 (56%), Positives = 40/59 (68%), Gaps = 4/59 (6%) Query 3 VGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNN 61 V +EVLKVENS+VR EQL KL LR+ RD V+AALA L+RAAA+ G+ NN Sbjct 495 VDTIEVLKVENSKVRKEQLEKLVRLRAERDPEAVEAALANLTRAAAST----EGGMENN 549 >gi|226306576|ref|YP_002766536.1| methylmalonyl-CoA mutase large subunit [Rhodococcus erythropolis PR4] gi|226185693|dbj|BAH33797.1| methylmalonyl-CoA mutase large subunit [Rhodococcus erythropolis PR4] Length=750 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/59 (56%), Positives = 40/59 (68%), Gaps = 4/59 (6%) Query 3 VGEVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNN 61 V +EVLKVENS+VR EQL KL LR+ RD V+AALA L+RAAA+ G+ NN Sbjct 495 VDTIEVLKVENSKVRKEQLEKLVRLRAERDPEAVEAALANLTRAAAST----EGGMENN 549 >gi|256380405|ref|YP_003104065.1| methylmalonyl-CoA mutase [Actinosynnema mirum DSM 43827] gi|255924708|gb|ACU40219.1| methylmalonyl-CoA mutase, large subunit [Actinosynnema mirum DSM 43827] Length=729 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 31/59 (53%), Positives = 40/59 (68%), Gaps = 4/59 (6%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLM 63 ++EVLKV+N+ VRA QLAKL LR+ RD+ VDA+L L+RAA A T G NL+ Sbjct 478 QIEVLKVDNAGVRASQLAKLERLRAERDQSEVDASLDALTRAAGAD----TGGTAGNLL 532 >gi|38233857|ref|NP_939624.1| methylmalonyl-CoA mutase [Corynebacterium diphtheriae NCTC 13129] gi|38200118|emb|CAE49799.1| Putative methylmalonyl-CoA mutase large subunit [Corynebacterium diphtheriae] Length=735 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/43 (59%), Positives = 34/43 (80%), Gaps = 0/43 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAA 47 ++EVLKV+N++VRAEQLAKL +LR+ RD+ VD L L+ AA Sbjct 472 QIEVLKVDNTKVRAEQLAKLEQLRAERDQAEVDRCLKALTEAA 514 >gi|226366427|ref|YP_002784210.1| methylmalonyl-CoA mutase [Rhodococcus opacus B4] gi|226244917|dbj|BAH55265.1| methylmalonyl-CoA mutase large subunit [Rhodococcus opacus B4] Length=754 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/60 (65%), Positives = 44/60 (74%), Gaps = 4/60 (6%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 E+EVLKVENSRVR EQL KL LR+ RD V+AALAELSRAAAA G+ NNL+A Sbjct 497 EIEVLKVENSRVRKEQLEKLDRLRADRDSAAVEAALAELSRAAAAT----EGGMENNLLA 552 >gi|227488913|ref|ZP_03919229.1| methylmalonyl-CoA mutase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542093|ref|ZP_03972142.1| methylmalonyl-CoA mutase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091097|gb|EEI26409.1| methylmalonyl-CoA mutase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182144|gb|EEI63116.1| methylmalonyl-CoA mutase [Corynebacterium glucuronolyticum ATCC 51866] Length=742 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/59 (51%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLM 63 E+EVLKVENSRVR EQL KL +LR RD V L L+ AAA L NL+ Sbjct 478 EIEVLKVENSRVRHEQLEKLKKLREERDEAEVQKTLDALTYAAAHEDEKKPGDLSLNLL 536 >gi|237785520|ref|YP_002906225.1| methylmalonyl-CoA mutase [Corynebacterium kroppenstedtii DSM 44385] gi|237758432|gb|ACR17682.1| methylmalonyl-CoA mutase, large subunit [Corynebacterium kroppenstedtii DSM 44385] Length=750 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 31/58 (54%), Positives = 38/58 (66%), Gaps = 2/58 (3%) Query 6 VEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLM 63 +EVLKVENSRVR EQ KL +LR+ RD+ VD AL L+ AA G G L +NL+ Sbjct 474 IEVLKVENSRVRQEQHDKLEKLRAERDQGAVDQALNALTGAAGMDGSHGN--LEHNLL 529 >gi|333919601|ref|YP_004493182.1| methylmalonyl-CoA mutase large subunit [Amycolicicoccus subflavus DQS3-9A1] gi|333481822|gb|AEF40382.1| Methylmalonyl-CoA mutase large subunit [Amycolicicoccus subflavus DQS3-9A1] Length=763 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/59 (55%), Positives = 39/59 (67%), Gaps = 4/59 (6%) Query 6 VEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 +EVLKVENSRVR EQL KL LR+ RD V AL +L++AAA GL +NL+A Sbjct 508 IEVLKVENSRVRREQLEKLERLRADRDATAVREALEKLTQAAANPA----PGLEHNLLA 562 >gi|294633372|ref|ZP_06711931.1| methylmalonyl-CoA mutase, alpha subunit [Streptomyces sp. e14] gi|292831153|gb|EFF89503.1| methylmalonyl-CoA mutase, alpha subunit [Streptomyces sp. e14] Length=724 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/47 (56%), Positives = 33/47 (71%), Gaps = 0/47 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARG 51 ++EVLKV+NS VRA+Q+ KL LR+ RD V AL L+RAAA G Sbjct 477 QIEVLKVDNSSVRAQQIEKLRRLRAERDEVACQGALDALTRAAAGEG 523 >gi|110633213|ref|YP_673421.1| methylmalonyl-CoA mutase [Mesorhizobium sp. BNC1] gi|110284197|gb|ABG62256.1| methylmalonyl-CoA mutase [Chelativorans sp. BNC1] Length=714 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 24/47 (52%), Positives = 37/47 (79%), Gaps = 0/47 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARG 51 +V+VLK++NS+VRA QL+KL +L+ +RD +V+ AL EL++AA G Sbjct 465 QVDVLKIDNSQVRARQLSKLQQLKGTRDVAKVENALDELTKAAKTDG 511 >gi|331696936|ref|YP_004333175.1| methylmalonyl-CoA mutase large subunit [Pseudonocardia dioxanivorans CB1190] gi|326951625|gb|AEA25322.1| methylmalonyl-CoA mutase, large subunit [Pseudonocardia dioxanivorans CB1190] Length=726 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/60 (50%), Positives = 38/60 (64%), Gaps = 0/60 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAARGCAGTSGLGNNLMA 64 +++VLKV+N+ VR EQL KL LR RD VDAAL +L+ AAAA G NL+A Sbjct 468 QIDVLKVDNAGVRREQLDKLERLRRERDSRDVDAALEKLTGAAAAIAEGTERDAGQNLLA 527 >gi|288922909|ref|ZP_06417070.1| methylmalonyl-CoA mutase, large subunit [Frankia sp. EUN1f] gi|288345738|gb|EFC80106.1| methylmalonyl-CoA mutase, large subunit [Frankia sp. EUN1f] Length=748 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/60 (52%), Positives = 41/60 (69%), Gaps = 1/60 (1%) Query 6 VEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAA-AARGCAGTSGLGNNLMA 64 +EVLKV+NS VRA Q+ KL LR RD V++AL L+ AA AAR + + LG+NL+A Sbjct 482 IEVLKVDNSAVRAGQIEKLRRLREERDSAAVESALRALTGAAEAARDGSRPADLGHNLLA 541 >gi|320163677|gb|EFW40576.1| methylmalonyl Coenzyme A mutase [Capsaspora owczarzaki ATCC 30864] Length=775 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/42 (60%), Positives = 31/42 (74%), Gaps = 0/42 (0%) Query 6 VEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAA 47 V+VL V+NSRVRA Q+AKL ELR+ RD + AAL L+ AA Sbjct 485 VDVLAVDNSRVRASQIAKLAELRAKRDPAKAQAALDALTEAA 526 >gi|83945198|ref|ZP_00957547.1| methylmalonyl-CoA mutase [Oceanicaulis alexandrii HTCC2633] gi|83851368|gb|EAP89224.1| methylmalonyl-CoA mutase [Oceanicaulis alexandrii HTCC2633] Length=713 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/43 (59%), Positives = 33/43 (77%), Gaps = 0/43 (0%) Query 5 EVEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAA 47 ++ VLKV+NS+VRAEQLAKL LR +RD V++AL L+ AA Sbjct 468 DIPVLKVDNSKVRAEQLAKLETLRKNRDPKAVESALEALTNAA 510 >gi|163848059|ref|YP_001636103.1| methylmalonyl-CoA mutase [Chloroflexus aurantiacus J-10-fl] gi|222525949|ref|YP_002570420.1| methylmalonyl-CoA mutase [Chloroflexus sp. Y-400-fl] gi|163669348|gb|ABY35714.1| methylmalonyl-CoA mutase, large subunit [Chloroflexus aurantiacus J-10-fl] gi|222449828|gb|ACM54094.1| methylmalonyl-CoA mutase, large subunit [Chloroflexus sp. Y-400-fl] Length=733 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 22/44 (50%), Positives = 33/44 (75%), Gaps = 0/44 (0%) Query 6 VEVLKVENSRVRAEQLAKLYELRSSRDRVRVDAALAELSRAAAA 49 +E+L+V+N+ VR +Q+ +L LR+ RD VRV A L EL+R AA+ Sbjct 480 IEILEVDNTAVRQKQIERLQRLRTERDEVRVQATLNELTRVAAS 523 Lambda K H 0.315 0.130 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130617491818 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40