BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1491c
Length=252
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608629|ref|NP_216007.1| hypothetical protein Rv1491c [Mycob... 484 4e-135
gi|240167873|ref|ZP_04746532.1| hypothetical protein MkanA1_0105... 373 1e-101
gi|118617164|ref|YP_905496.1| hypothetical protein MUL_1504 [Myc... 334 7e-90
gi|183982314|ref|YP_001850605.1| hypothetical protein MMAR_2301 ... 333 1e-89
gi|296170637|ref|ZP_06852213.1| conserved hypothetical protein [... 295 5e-78
gi|254819567|ref|ZP_05224568.1| hypothetical protein MintA_06569... 275 6e-72
gi|118471288|ref|YP_887472.1| hypothetical protein MSMEG_3157 [M... 268 7e-70
gi|41407322|ref|NP_960158.1| hypothetical protein MAP1224c [Myco... 263 2e-68
gi|336458052|gb|EGO37039.1| hypothetical protein MAPs_17500 [Myc... 262 3e-68
gi|118463308|ref|YP_882461.1| hypothetical protein MAV_3279 [Myc... 262 4e-68
gi|342858787|ref|ZP_08715442.1| hypothetical protein MCOL_07916 ... 261 6e-68
gi|333990863|ref|YP_004523477.1| hypothetical protein JDM601_222... 255 3e-66
gi|120403745|ref|YP_953574.1| hypothetical protein Mvan_2761 [My... 255 4e-66
gi|169629797|ref|YP_001703446.1| hypothetical protein MAB_2713 [... 243 3e-62
gi|145224235|ref|YP_001134913.1| hypothetical protein Mflv_3651 ... 234 1e-59
gi|315444570|ref|YP_004077449.1| hypothetical protein Mspyr1_299... 232 3e-59
gi|108800090|ref|YP_640287.1| hypothetical protein Mmcs_3124 [My... 230 1e-58
gi|226306574|ref|YP_002766534.1| hypothetical protein RER_30870 ... 182 4e-44
gi|226366424|ref|YP_002784207.1| hypothetical protein ROP_70150 ... 178 6e-43
gi|111024181|ref|YP_707153.1| hypothetical protein RHA1_ro07231 ... 172 5e-41
gi|312139660|ref|YP_004006996.1| integral membrane protein [Rhod... 161 1e-37
gi|325676893|ref|ZP_08156566.1| hypothetical protein HMPREF0724_... 160 2e-37
gi|317508726|ref|ZP_07966379.1| hypothetical protein HMPREF9336_... 151 1e-34
gi|296139811|ref|YP_003647054.1| hypothetical protein Tpau_2103 ... 149 3e-34
gi|237785522|ref|YP_002906227.1| hypothetical protein ckrop_0930... 149 4e-34
gi|296393890|ref|YP_003658774.1| hypothetical protein Srot_1480 ... 147 1e-33
gi|326382245|ref|ZP_08203937.1| hypothetical protein SCNU_04846 ... 147 1e-33
gi|333919599|ref|YP_004493180.1| hypothetical protein AS9A_1931 ... 146 2e-33
gi|54025438|ref|YP_119680.1| hypothetical protein nfa34680 [Noca... 144 8e-33
gi|300781174|ref|ZP_07091028.1| conserved hypothetical protein [... 144 2e-32
gi|262202345|ref|YP_003273553.1| hypothetical protein Gbro_2418 ... 142 5e-32
gi|227833067|ref|YP_002834774.1| hypothetical protein cauri_1243... 141 1e-31
gi|145295662|ref|YP_001138483.1| hypothetical protein cgR_1589 [... 140 2e-31
gi|344045014|gb|EGV40688.1| hypothetical protein CgS9114_06810 [... 139 3e-31
gi|260578732|ref|ZP_05846639.1| membrane protein [Corynebacteriu... 139 5e-31
gi|19552744|ref|NP_600746.1| hypothetical protein NCgl1473 [Cory... 137 1e-30
gi|331695375|ref|YP_004331614.1| hypothetical protein Psed_1522 ... 137 1e-30
gi|68536038|ref|YP_250743.1| hypothetical protein jk0961 [Coryne... 137 2e-30
gi|21324299|dbj|BAB98924.1| Uncharacterized ACR [Corynebacterium... 137 2e-30
gi|38233859|ref|NP_939626.1| hypothetical protein DIP1274 [Coryn... 136 3e-30
gi|213965597|ref|ZP_03393791.1| putative membrane protein [Coryn... 136 3e-30
gi|262182443|ref|ZP_06041864.1| hypothetical protein CaurA7_0048... 135 4e-30
gi|257056395|ref|YP_003134227.1| hypothetical protein Svir_24030... 135 4e-30
gi|25028208|ref|NP_738262.1| hypothetical protein CE1652 [Coryne... 135 8e-30
gi|305681348|ref|ZP_07404155.1| putative membrane protein [Coryn... 134 1e-29
gi|259507267|ref|ZP_05750167.1| membrane protein [Corynebacteriu... 134 1e-29
gi|225021417|ref|ZP_03710609.1| hypothetical protein CORMATOL_01... 133 3e-29
gi|227488911|ref|ZP_03919227.1| YdjX-Z family protein [Corynebac... 132 7e-29
gi|300858489|ref|YP_003783472.1| hypothetical protein cpfrc_0107... 131 8e-29
gi|302330757|gb|ADL20951.1| Hypothetical protein Cp1002_1066 [Co... 130 1e-28
>gi|15608629|ref|NP_216007.1| hypothetical protein Rv1491c [Mycobacterium tuberculosis H37Rv]
gi|15840954|ref|NP_335991.1| hypothetical protein MT1538 [Mycobacterium tuberculosis CDC1551]
gi|31792687|ref|NP_855180.1| hypothetical protein Mb1528c [Mycobacterium bovis AF2122/97]
82 more sequence titles
Length=252
Score = 484 bits (1247), Expect = 4e-135, Method: Compositional matrix adjust.
Identities = 251/252 (99%), Positives = 252/252 (100%), Gaps = 0/252 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
+TAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW
Sbjct 1 MTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL
Sbjct 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF
Sbjct 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP 240
AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP
Sbjct 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP 240
Query 241 GYDDPVREPALI 252
GYDDPVREPALI
Sbjct 241 GYDDPVREPALI 252
>gi|240167873|ref|ZP_04746532.1| hypothetical protein MkanA1_01055 [Mycobacterium kansasii ATCC
12478]
Length=258
Score = 373 bits (957), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 189/253 (75%), Positives = 219/253 (87%), Gaps = 2/253 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
VTAPAIC TT+TV GIA +LG ARQ SLPR+VGTVVGIT LV VALLVP+PTAV++RDW
Sbjct 4 VTAPAICKTTDTVRGIAIALGTAARQVSLPRMVGTVVGITALVAVALLVPLPTAVQMRDW 63
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
A S+G WFPLAFL+VH VVTVPPFPRTAFT+AAGLLFG G+ IA++ STASAVI+MLL
Sbjct 64 ATSVGPWFPLAFLVVHIVVTVPPFPRTAFTVAAGLLFGPAWGILIAIIASTASAVISMLL 123
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRA GW+LN LVR RA++RLD RLRERGWLAILSLRLIP VPFAA+NY AGAS VR+ +
Sbjct 124 VRAAGWRLNRLVRHRAVDRLDARLRERGWLAILSLRLIPAVPFAALNYGAGASAVRVAPY 183
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRR-M 239
A +TL GLLPGTAAVVILG+A AG G+PLL+LVSVCT ALG+ GL++E+R+YRRQHRR M
Sbjct 184 ALSTLTGLLPGTAAVVILGNALAGDGNPLLVLVSVCTAALGMAGLIFEVRHYRRQHRRSM 243
Query 240 PGYD-DPVREPAL 251
P YD +PVREPA+
Sbjct 244 PSYDHEPVREPAV 256
>gi|118617164|ref|YP_905496.1| hypothetical protein MUL_1504 [Mycobacterium ulcerans Agy99]
gi|118569274|gb|ABL04025.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=259
Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/251 (70%), Positives = 200/251 (80%), Gaps = 1/251 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
VTA +C TT+TV GIA +L ARQ S R V TV GIT+LV VALLVP+PTAV++RDW
Sbjct 3 VTASVLCKTTDTVRGIALALRTAARQMSRLRKVSTVAGITLLVAVALLVPLPTAVQMRDW 62
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
A S+G W PL FLLVH VVTVPPFPRTAFT+A GLLFG V+G+ IAV STASAVIA+LL
Sbjct 63 ASSVGPWLPLVFLLVHIVVTVPPFPRTAFTVAGGLLFGPVLGIVIAVTASTASAVIALLL 122
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRA GW+LN LV A++RLDERLRERGWLAILSLRLIP VPFAA+NY AGAS VR++ +
Sbjct 123 VRAAGWRLNRLVPHGAVDRLDERLRERGWLAILSLRLIPAVPFAALNYGAGASAVRVVPY 182
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRM- 239
+TLAGLLPGT AVVILG A AG GSPLL+LVSVCT ALG++GLV+E+R YRR HR
Sbjct 183 TLSTLAGLLPGTVAVVILGSALAGDGSPLLVLVSVCTAALGMSGLVFEVRQYRRHHRHQA 242
Query 240 PGYDDPVREPA 250
P PV EPA
Sbjct 243 PSDHGPVLEPA 253
>gi|183982314|ref|YP_001850605.1| hypothetical protein MMAR_2301 [Mycobacterium marinum M]
gi|183175640|gb|ACC40750.1| conserved membrane protein [Mycobacterium marinum M]
Length=257
Score = 333 bits (854), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/251 (70%), Positives = 200/251 (80%), Gaps = 1/251 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
+TA +C TT+TV GIA +L ARQ S R V TV GIT+LV VALLVP+PTAV++RDW
Sbjct 1 MTASVLCKTTDTVRGIALALRTAARQMSRLRKVSTVAGITLLVAVALLVPLPTAVQMRDW 60
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
A S+G W PL FLLVH VVTVPPFPRTAFT+A GLLFG V+G+ IAV STASAVIA+LL
Sbjct 61 ASSVGPWLPLVFLLVHIVVTVPPFPRTAFTVAGGLLFGPVLGIVIAVTASTASAVIALLL 120
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRA GW+LN LV A++RLDERLRERGWLAILSLRLIP VPFAA+NY AGAS VR++ +
Sbjct 121 VRAAGWRLNRLVPHGAVDRLDERLRERGWLAILSLRLIPAVPFAALNYGAGASAVRVVPY 180
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRM- 239
+TLAGLLPGT AVVILG A AG GSPLL+LVSVCT ALG++GLV+E+R YRR HR
Sbjct 181 TLSTLAGLLPGTVAVVILGSALAGDGSPLLVLVSVCTAALGMSGLVFEVRQYRRHHRHQA 240
Query 240 PGYDDPVREPA 250
P PV EPA
Sbjct 241 PSDHGPVLEPA 251
>gi|296170637|ref|ZP_06852213.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894728|gb|EFG74461.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=255
Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/254 (67%), Positives = 195/254 (77%), Gaps = 2/254 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
+TA A C T+ + +LGA AR S PR + TVVGITVL+ A +P+PT V++RDW
Sbjct 1 MTASATCRINRTLRDLGAALGATARLLSRPRAIATVVGITVLIAAASWLPLPTPVQMRDW 60
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
A+S+G WFPLAFL H V TV P PRTAFTLAAGLLFG + GV IAVV STASAVIA+LL
Sbjct 61 AESVGPWFPLAFLAAHVVATVVPIPRTAFTLAAGLLFGPLTGVAIAVVASTASAVIALLL 120
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRA GW+LN LVR R+I+ +DERLR+RGWLAILSLRLIP VPF+AINYAAGAS VR+L +
Sbjct 121 VRAVGWRLNRLVRHRSIDTVDERLRQRGWLAILSLRLIPAVPFSAINYAAGASTVRVLPY 180
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRM- 239
ATL GLLPGTAAVVILGDA AG + LL LVS+CT LGLTGLV EIR+YRR HRR
Sbjct 181 TLATLGGLLPGTAAVVILGDALAGHPNSLLYLVSLCTATLGLTGLVIEIRHYRRHHRRAH 240
Query 240 -PGYDDPVREPALI 252
P DDP EPA +
Sbjct 241 SPAADDPSPEPAAV 254
>gi|254819567|ref|ZP_05224568.1| hypothetical protein MintA_06569 [Mycobacterium intracellulare
ATCC 13950]
Length=255
Score = 275 bits (702), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 159/254 (63%), Positives = 194/254 (77%), Gaps = 2/254 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
+T A T T+ + ++GA AR S RIV TVVGIT L+V+A +P+P+ V++RDW
Sbjct 1 MTGSATSKITATLRDLGCAIGAAARSVSRSRIVWTVVGITALLVLASWLPLPSPVQMRDW 60
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
A+SLG WFPLAFL+ H VVTV P PRTAFTLAAGLLFG ++GV IAVV STASA+IA+LL
Sbjct 61 AQSLGPWFPLAFLVAHIVVTVVPIPRTAFTLAAGLLFGPLLGVAIAVVASTASAMIALLL 120
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRA GW+LN LVR R+I+ ++ERLR RGWLAI+SLRLIP VPF+A+NYAAGAS VR+L +
Sbjct 121 VRALGWRLNRLVRHRSIDTVEERLRRRGWLAIVSLRLIPAVPFSALNYAAGASSVRVLPY 180
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP 240
ATLAGLLPGT AVV+LGDA AG S LL LVS T ALGL GL+ E+R++RR HRR
Sbjct 181 GLATLAGLLPGTTAVVVLGDALAGHPSSLLYLVSAITSALGLAGLIIEVRHFRRHHRRAH 240
Query 241 GY--DDPVREPALI 252
D+P EPA +
Sbjct 241 RRVDDEPSPEPATV 254
>gi|118471288|ref|YP_887472.1| hypothetical protein MSMEG_3157 [Mycobacterium smegmatis str.
MC2 155]
gi|118172575|gb|ABK73471.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=245
Score = 268 bits (684), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/227 (63%), Positives = 172/227 (76%), Gaps = 0/227 (0%)
Query 11 ETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPL 70
T+ I ++ A S RIV + GI +LV VALLVP+PTA++LRDWA S+G WFPL
Sbjct 6 STLRSIRAAVLTTAATLSTRRIVAILAGIVILVAVALLVPLPTAMQLRDWATSVGPWFPL 65
Query 71 AFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNS 130
AFL H +VTV PFPRTAFTLAAGLLFG +G+ IAV S SAV+A+LL+RA GWQL+
Sbjct 66 AFLGAHILVTVFPFPRTAFTLAAGLLFGPALGIAIAVSASAISAVLALLLIRAAGWQLSR 125
Query 131 LVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLP 190
LV I++LD RLR+RGW ILS RLIP VPF+ +NYAAGAS VR++ +A ATL GLLP
Sbjct 126 LVSHPRIDKLDARLRQRGWPVILSTRLIPAVPFSVLNYAAGASAVRLVPYALATLVGLLP 185
Query 191 GTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHR 237
GTAAVVILGDA G+ SPLL +VS CT ALGL GLV+EIR++RR+ R
Sbjct 186 GTAAVVILGDALTGNVSPLLFVVSACTAALGLAGLVFEIRSHRREQR 232
>gi|41407322|ref|NP_960158.1| hypothetical protein MAP1224c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395674|gb|AAS03541.1| hypothetical protein MAP_1224c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=258
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/254 (65%), Positives = 195/254 (77%), Gaps = 2/254 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
VT A ET+ + ++GA AR S RI TV GIT LVV+A L+P+P+ V++RDW
Sbjct 4 VTGSATSKIAETLRDLGCAIGAAARGVSRSRIAWTVAGITALVVLASLIPLPSPVQMRDW 63
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
A+S+G WFPLAFLL H VVTV P PRTAFTLAAGLLFG ++GV IAV STASA+IAMLL
Sbjct 64 AQSVGPWFPLAFLLAHIVVTVVPVPRTAFTLAAGLLFGPLLGVAIAVAASTASAMIAMLL 123
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRA GW+L LVR R+++ ++ERLR+RGWLAI+SLRLIP VPF+A+NYAAGAS VR+L +
Sbjct 124 VRAAGWRLTRLVRHRSMDTVEERLRQRGWLAIVSLRLIPAVPFSALNYAAGASSVRVLPY 183
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP 240
ATLAGLLPGTAAVVILGDA AG S LL LVS T ALGLTGLV EIR++RR HRR
Sbjct 184 GLATLAGLLPGTAAVVILGDALAGHPSSLLYLVSALTSALGLTGLVIEIRHFRRHHRRAH 243
Query 241 GY--DDPVREPALI 252
+ D+P EPA I
Sbjct 244 RHRDDEPSPEPATI 257
>gi|336458052|gb|EGO37039.1| hypothetical protein MAPs_17500 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=255
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/254 (65%), Positives = 195/254 (77%), Gaps = 2/254 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
+T A ET+ + ++GA AR S RI TV GIT LVV+A L+P+P+ V++RDW
Sbjct 1 MTGSATSKIAETLRDLGCAIGAAARGVSRSRIAWTVAGITALVVLASLIPLPSPVQMRDW 60
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
A+S+G WFPLAFLL H VVTV P PRTAFTLAAGLLFG ++GV IAV STASA+IAMLL
Sbjct 61 AQSVGPWFPLAFLLAHIVVTVVPVPRTAFTLAAGLLFGPLLGVAIAVAASTASAMIAMLL 120
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRA GW+L LVR R+++ ++ERLR+RGWLAI+SLRLIP VPF+A+NYAAGAS VR+L +
Sbjct 121 VRAAGWRLTRLVRHRSMDTVEERLRQRGWLAIVSLRLIPAVPFSALNYAAGASSVRVLPY 180
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP 240
ATLAGLLPGTAAVVILGDA AG S LL LVS T ALGLTGLV EIR++RR HRR
Sbjct 181 GLATLAGLLPGTAAVVILGDALAGHPSSLLYLVSALTSALGLTGLVIEIRHFRRHHRRAH 240
Query 241 GY--DDPVREPALI 252
+ D+P EPA I
Sbjct 241 RHRDDEPSPEPATI 254
>gi|118463308|ref|YP_882461.1| hypothetical protein MAV_3279 [Mycobacterium avium 104]
gi|254775726|ref|ZP_05217242.1| hypothetical protein MaviaA2_13810 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164595|gb|ABK65492.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=255
Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 162/254 (64%), Positives = 195/254 (77%), Gaps = 2/254 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
+T A ET+ + ++GA AR S RI TV GIT LVV+A L+P+P+ V++RDW
Sbjct 1 MTGSATSKIAETLRDLGCAIGAAARGVSRSRIAWTVAGITALVVLASLIPLPSPVQMRDW 60
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
A+S+G WFPLAFLL H VVTV P PRTAFTLAAGLLFG ++GV IAV STASA+IAMLL
Sbjct 61 AQSVGPWFPLAFLLAHIVVTVVPVPRTAFTLAAGLLFGPLLGVAIAVAASTASAMIAMLL 120
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRA GW+L LVR R+++ ++ERLR+RGWLAI+SLRLIP VPF+A+NYAAGAS VR+L +
Sbjct 121 VRAAGWRLTRLVRHRSMDTVEERLRQRGWLAIVSLRLIPAVPFSALNYAAGASSVRVLPY 180
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMP 240
ATLAGLLPGTAAVVILGDA AG S LL LVS T ALGLTGL+ EIR++RR HRR
Sbjct 181 GLATLAGLLPGTAAVVILGDALAGHPSSLLYLVSALTSALGLTGLIIEIRHFRRHHRRAH 240
Query 241 GY--DDPVREPALI 252
+ D+P EPA I
Sbjct 241 RHRDDEPSPEPATI 254
>gi|342858787|ref|ZP_08715442.1| hypothetical protein MCOL_07916 [Mycobacterium colombiense CECT
3035]
gi|342134491|gb|EGT87671.1| hypothetical protein MCOL_07916 [Mycobacterium colombiense CECT
3035]
Length=255
Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/229 (66%), Positives = 179/229 (79%), Gaps = 0/229 (0%)
Query 1 VTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDW 60
+T A N T T+ + ++G AR S RIV TVVGIT L+++A L+P+P+ V++RDW
Sbjct 1 MTGSATSNITATLRDLGCAIGVAARGVSRSRIVWTVVGITALLLLASLLPLPSPVQMRDW 60
Query 61 AKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLL 120
A+S+G WFPLAFL H VVTV P PRTAFTLAAGLLFG ++GV IAVV ST SA+IAMLL
Sbjct 61 AQSVGPWFPLAFLAAHIVVTVVPIPRTAFTLAAGLLFGPLLGVAIAVVASTVSAMIAMLL 120
Query 121 VRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
VRA GW+LN LVR R+I+ ++ERLR+RGWLAILSLRLIP VPF+ +NYAAGAS VR+L +
Sbjct 121 VRAAGWRLNRLVRHRSIDTVEERLRQRGWLAILSLRLIPAVPFSVLNYAAGASSVRVLPY 180
Query 181 AWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEI 229
A ATL GLLPGT AVV+LGDA AG S LL LVS T ALGLTGL+ EI
Sbjct 181 AVATLVGLLPGTTAVVVLGDALAGHISALLYLVSAVTSALGLTGLIIEI 229
>gi|333990863|ref|YP_004523477.1| hypothetical protein JDM601_2223 [Mycobacterium sp. JDM601]
gi|333486831|gb|AEF36223.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=253
Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/219 (63%), Positives = 167/219 (77%), Gaps = 1/219 (0%)
Query 19 SLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTV 78
+L +ARQ ++ R+ T I LV VALLVPVPTAV+LRDWA++LG WFPLAFL HTV
Sbjct 18 ALVTIARQVAVWRLALTTAVIVTLVAVALLVPVPTAVQLRDWAQTLGPWFPLAFLTAHTV 77
Query 79 VTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAIN 138
VTV PFPRTAFTLAAGLLFG +G+ +AV S SAV A++L+R GWQL+ +VR ++
Sbjct 78 VTVLPFPRTAFTLAAGLLFGPWLGIVLAVSASALSAVTALILMRVFGWQLSRVVRHPRMH 137
Query 139 RLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVIL 198
LD RLRERGW A++SLRLIP +PF+ INYAAGAS VR+L + ATL GLLPGTAAVV+L
Sbjct 138 SLDARLRERGWPAVVSLRLIPAIPFSVINYAAGASAVRLLPYTVATLIGLLPGTAAVVVL 197
Query 199 GDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHR 237
GDA G SP L VS CT A+G+ LVYE+R++RR HR
Sbjct 198 GDALTGDVSPQLFAVSACTAAVGVALLVYEVRSHRR-HR 235
>gi|120403745|ref|YP_953574.1| hypothetical protein Mvan_2761 [Mycobacterium vanbaalenii PYR-1]
gi|119956563|gb|ABM13568.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=267
Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/206 (62%), Positives = 162/206 (79%), Gaps = 0/206 (0%)
Query 31 RIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFT 90
R+ T+ I +LV VALLVP+PTA++LRDWA S+G+WFPLAF H VVTV PFPRTAFT
Sbjct 56 RLAATLTAIVILVAVALLVPLPTALQLRDWATSVGSWFPLAFFAAHVVVTVFPFPRTAFT 115
Query 91 LAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWL 150
LAAGLLFG V+G+ IAV ST SAV+A+LLVR GWQ++ LV ++ +D+RLRERGW
Sbjct 116 LAAGLLFGPVLGIPIAVAASTVSAVVALLLVRVAGWQVSRLVVHPRVDAVDKRLRERGWP 175
Query 151 AILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLL 210
+L+ R+IP VPF+ +NYAAGAS VR++ + AT+ G+LPGT+A+VILGDA G SPLL
Sbjct 176 VVLATRMIPAVPFSVLNYAAGASSVRLMPYTLATVVGVLPGTSAIVILGDALTGRVSPLL 235
Query 211 ILVSVCTGALGLTGLVYEIRNYRRQH 236
+LVS+CT A+G+ GL+YEIR +RR
Sbjct 236 VLVSLCTAAVGVAGLIYEIRTHRRSQ 261
>gi|169629797|ref|YP_001703446.1| hypothetical protein MAB_2713 [Mycobacterium abscessus ATCC 19977]
gi|169241764|emb|CAM62792.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=243
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/210 (60%), Positives = 160/210 (77%), Gaps = 5/210 (2%)
Query 38 GITVLVVVAL--LVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGL 95
G +L+V+A VP+PTA+++RDWA+ LG WFPLAFL HT+VTV PFPRTAFTLAAGL
Sbjct 26 GAALLIVIAAVRFVPLPTALQMRDWARDLGPWFPLAFLGAHTIVTVLPFPRTAFTLAAGL 85
Query 96 LFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSL 155
LFG+ +GV +AVV STASAV+A+ VRA GW+L++L R A+ +D++LR RGW+A++S+
Sbjct 86 LFGTQLGVLLAVVASTASAVLALWAVRALGWKLSALHHRPAVKSVDDQLRRRGWIAVMSM 145
Query 156 RLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSV 215
RLIP VPF+ +NYAAGAS VR L + AT GLLPGT AVV+LGDA G SP L VS+
Sbjct 146 RLIPAVPFSVLNYAAGASAVRALPYTLATFVGLLPGTLAVVVLGDALTGHISPTLFAVSL 205
Query 216 CTGALGLTGLVYEIRNYRRQHRRMPGYDDP 245
T A+G+ G++YEIR Y+R H +P DP
Sbjct 206 ATSAIGVLGILYEIRRYKRTHTEIP---DP 232
>gi|145224235|ref|YP_001134913.1| hypothetical protein Mflv_3651 [Mycobacterium gilvum PYR-GCK]
gi|145216721|gb|ABP46125.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=245
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/204 (60%), Positives = 152/204 (75%), Gaps = 0/204 (0%)
Query 31 RIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFT 90
R++ I +LV VA VP+PTA+++RDWA S G WFPL F + H VVTV PFPRTAFT
Sbjct 34 RLLAMAATIVILVAVAYFVPLPTALQVRDWATSAGPWFPLVFFVAHVVVTVFPFPRTAFT 93
Query 91 LAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWL 150
LAAGLLFG +GV IAV ST SAVIA+LLVR GWQ++ LV ++ +D+RLRERGW
Sbjct 94 LAAGLLFGPALGVPIAVAASTLSAVIALLLVRTAGWQVHKLVEHPRVDAIDQRLRERGWP 153
Query 151 AILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLL 210
+LS RLI +PF+ +NYAAGAS VR+L + ATL G+LPGTAAVVILGDA G SP+L
Sbjct 154 VVLSARLIFALPFSVLNYAAGASSVRVLPYTLATLFGVLPGTAAVVILGDALTGRVSPML 213
Query 211 ILVSVCTGALGLTGLVYEIRNYRR 234
++VS+CT +GL L EIR++RR
Sbjct 214 LVVSLCTALVGLAVLALEIRSHRR 237
>gi|315444570|ref|YP_004077449.1| hypothetical protein Mspyr1_29950 [Mycobacterium sp. Spyr1]
gi|315262873|gb|ADT99614.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=208
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/196 (62%), Positives = 149/196 (77%), Gaps = 0/196 (0%)
Query 39 ITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFG 98
I +LV VA VP+PTA+++RDWA S G WFPL F + H VVTV PFPRTAFTLAAGLLFG
Sbjct 5 IVILVAVAYFVPLPTALQVRDWATSAGPWFPLVFFVAHVVVTVFPFPRTAFTLAAGLLFG 64
Query 99 SVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLI 158
+GV IAV ST SAVIA+LLVR GWQ++ LV ++ +D+RLRERGW +LS RLI
Sbjct 65 PALGVPIAVAASTLSAVIALLLVRTAGWQVHKLVEHPRVDAIDQRLRERGWPVVLSARLI 124
Query 159 PVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTG 218
+PF+ +NYAAGAS VR+L + ATL G+LPGTAAVVILGDA G SP+L++VS+CT
Sbjct 125 FALPFSVLNYAAGASSVRVLPYTLATLFGVLPGTAAVVILGDALTGRVSPMLLVVSLCTA 184
Query 219 ALGLTGLVYEIRNYRR 234
+GL L EIR++RR
Sbjct 185 LVGLAVLALEIRSHRR 200
>gi|108800090|ref|YP_640287.1| hypothetical protein Mmcs_3124 [Mycobacterium sp. MCS]
gi|119869217|ref|YP_939169.1| hypothetical protein Mkms_3185 [Mycobacterium sp. KMS]
gi|126435714|ref|YP_001071405.1| hypothetical protein Mjls_3135 [Mycobacterium sp. JLS]
gi|108770509|gb|ABG09231.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695306|gb|ABL92379.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126235514|gb|ABN98914.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=255
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/187 (63%), Positives = 147/187 (79%), Gaps = 0/187 (0%)
Query 49 VPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVV 108
VP+P A+ELRDWA S+GAWFPL FL H VVT PFPRTAFTLAAGLLFG ++G+ IAV
Sbjct 62 VPIPNALELRDWATSVGAWFPLVFLATHIVVTTLPFPRTAFTLAAGLLFGPLLGIAIAVA 121
Query 109 GSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINY 168
ST SA++A+L +RA GWQLN+LV A++R+D RLR RGW ++++LRLIP VPFA +NY
Sbjct 122 ASTVSALLAVLFIRALGWQLNNLVSHPAVDRIDVRLRRRGWPSVIALRLIPAVPFAVLNY 181
Query 169 AAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYE 228
AAGAS VR+L ++ AT GLLPGTAAVV+LGDA G +PLL+L+S T ++G+ L+YE
Sbjct 182 AAGASAVRLLPYSLATFFGLLPGTAAVVVLGDALTGRVNPLLVLISAATASIGVFVLLYE 241
Query 229 IRNYRRQ 235
R RR+
Sbjct 242 NRVQRRR 248
>gi|226306574|ref|YP_002766534.1| hypothetical protein RER_30870 [Rhodococcus erythropolis PR4]
gi|229493607|ref|ZP_04387392.1| putative membrane protein [Rhodococcus erythropolis SK121]
gi|226185691|dbj|BAH33795.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
gi|229319568|gb|EEN85404.1| putative membrane protein [Rhodococcus erythropolis SK121]
Length=236
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/187 (52%), Positives = 129/187 (69%), Gaps = 9/187 (4%)
Query 50 PVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVG 109
P PT ++R+WA S+G FPL F LVH++VTV PFPRT FTL+AG+LFGSV G+ + V
Sbjct 28 PHPTVSQVREWADSVGPAFPLVFFLVHSIVTVAPFPRTVFTLSAGVLFGSVTGIALTVAA 87
Query 110 STASAVIAMLLVRATG----WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAA 165
+T SAV+A+ LVRA G WQ + I R+DER+ +RGWLA+ SLRLI VPF+
Sbjct 88 TTVSAVLALYLVRAIGRDVVWQ---RISSPTIRRVDERIEKRGWLAVGSLRLIAFVPFSV 144
Query 166 INYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSP-LLILVSVCTGALGLTG 224
+NY G S +RI+ + AT+ G+LPGT +V+LGDA +G P LLIL +C A+G+ G
Sbjct 145 VNYCCGISSIRIVPYILATVVGILPGTVGIVVLGDALSGEADPRLLILSGICI-AIGIAG 203
Query 225 LVYEIRN 231
LV++ R
Sbjct 204 LVFDARR 210
>gi|226366424|ref|YP_002784207.1| hypothetical protein ROP_70150 [Rhodococcus opacus B4]
gi|226244914|dbj|BAH55262.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=236
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/226 (51%), Positives = 148/226 (66%), Gaps = 15/226 (6%)
Query 31 RIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFT 90
R++G LVVVALL P P+ +++R+WA S+G FPL F VH VVTV PFPRT FT
Sbjct 9 RVIGVAALAVALVVVALLAPHPSVLQVREWAHSVGPAFPLVFFAVHAVVTVFPFPRTVFT 68
Query 91 LAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATG----WQLNSLVRRRAINRLDERLRE 146
L+AGLLFG+ +G+ IAV+ ST SAV+A+ LVRA G WQ S I R+DER+
Sbjct 69 LSAGLLFGAWLGIAIAVLASTVSAVLALYLVRAVGRDVVWQRIS---NPTIRRVDERIAR 125
Query 147 RGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSG 206
RGWLA+ SLRLI VPF+ +NY AG S +R++ + AT G+LPGT +V+LGDA G
Sbjct 126 RGWLAVGSLRLIAFVPFSVVNYCAGVSSIRLVPYVLATAIGVLPGTVGIVVLGDALTGET 185
Query 207 SP-LLILVSVCTGALGLTGLVYEIRNYRRQHRRMPGYDDPVREPAL 251
P LL+L +VC ALG+ GLV + R R + G D V +PA+
Sbjct 186 KPGLLVLSAVCI-ALGIAGLVMDSR------RPLDGSRDAVPDPAV 224
>gi|111024181|ref|YP_707153.1| hypothetical protein RHA1_ro07231 [Rhodococcus jostii RHA1]
gi|110823711|gb|ABG98995.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=227
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/187 (52%), Positives = 130/187 (70%), Gaps = 9/187 (4%)
Query 50 PVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVG 109
P P+ +++R+WA+S+G FPL F+ VH V+TV PFPRT FTL+AGLLFG+ +G+ IAV+
Sbjct 19 PHPSVLQVREWARSVGPAFPLVFVAVHAVMTVFPFPRTVFTLSAGLLFGAWLGIAIAVLA 78
Query 110 STASAVIAMLLVRATG----WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAA 165
ST SAV+A+ LVRA G WQ S I R+DER+ RGWLA+ SLRLI VPF+
Sbjct 79 STVSAVLALYLVRAVGRDVVWQRIS---NPTIRRVDERIARRGWLAVGSLRLIAFVPFSV 135
Query 166 INYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSP-LLILVSVCTGALGLTG 224
+NY AG S +R++ + AT+ G+LPGT +V+LGDA G P LL+L +VC A G+ G
Sbjct 136 VNYCAGVSSIRLVPYVLATVVGVLPGTVGIVVLGDALTGETKPGLLVLSAVCIVA-GIAG 194
Query 225 LVYEIRN 231
LV + R
Sbjct 195 LVVDSRR 201
>gi|312139660|ref|YP_004006996.1| integral membrane protein [Rhodococcus equi 103S]
gi|311888999|emb|CBH48312.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=217
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/201 (47%), Positives = 136/201 (68%), Gaps = 1/201 (0%)
Query 32 IVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTL 91
++G +VG+ VL V A +VP P+ ++R WA+S+G FPL FL VH VVT+ P PRT FT+
Sbjct 1 MLGALVGLAVLFVAAAMVPHPSIEQIRSWAESVGPMFPLVFLFVHVVVTIAPVPRTLFTV 60
Query 92 AAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQ-LNSLVRRRAINRLDERLRERGWL 150
+AG+LFG+ G+ + + +T SAV+A+L+VRA G + + + A+ +D RL RGWL
Sbjct 61 SAGVLFGAATGIAVTMAATTISAVLALLIVRAIGRDAVAAHLTHPAVRSVDARLERRGWL 120
Query 151 AILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLL 210
A+ S+RLI ++PF+ +NY G S VR+L + AT+AG+LPGT VV+LGDA G P L
Sbjct 121 AVGSMRLIAMIPFSVVNYCCGVSSVRVLPYTLATVAGILPGTVGVVLLGDALTGETDPRL 180
Query 211 ILVSVCTGALGLTGLVYEIRN 231
++VS A+G+ GL + R
Sbjct 181 LVVSGICIAVGMLGLFVDART 201
>gi|325676893|ref|ZP_08156566.1| hypothetical protein HMPREF0724_14349 [Rhodococcus equi ATCC
33707]
gi|325552441|gb|EGD22130.1| hypothetical protein HMPREF0724_14349 [Rhodococcus equi ATCC
33707]
Length=217
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/201 (47%), Positives = 137/201 (69%), Gaps = 1/201 (0%)
Query 32 IVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTL 91
++G +VG+ VL V A +VP P+ ++R WA+S+G FPL FLLVH VVT+ P PRT FT+
Sbjct 1 MLGALVGLAVLFVAAAMVPHPSIEQIRSWAESVGPLFPLVFLLVHVVVTIAPVPRTLFTV 60
Query 92 AAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQ-LNSLVRRRAINRLDERLRERGWL 150
+AG+LFG+ G+ + + +T SAV+A+L+VRA G + + + ++ +D RL RGWL
Sbjct 61 SAGVLFGAATGIAVTMAATTISAVLALLIVRAIGRDAVAAHLTHPSVRSVDARLERRGWL 120
Query 151 AILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLL 210
A+ S+RLI ++PF+ +NY G S VR+L + AT+AG+LPGT VV+LGDA G P L
Sbjct 121 AVGSMRLIAMIPFSVVNYCCGVSSVRVLPYTLATVAGILPGTVGVVLLGDALTGETDPRL 180
Query 211 ILVSVCTGALGLTGLVYEIRN 231
++VS A+G+ GL + R
Sbjct 181 LVVSGICIAVGMLGLFVDART 201
>gi|317508726|ref|ZP_07966379.1| hypothetical protein HMPREF9336_02751 [Segniliparus rugosus ATCC
BAA-974]
gi|316252974|gb|EFV12391.1| hypothetical protein HMPREF9336_02751 [Segniliparus rugosus ATCC
BAA-974]
Length=251
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 120/200 (60%), Gaps = 3/200 (1%)
Query 32 IVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTL 91
+G IT V L P+P+ +RDWA+S GA L FL + ++TV P PRT FTL
Sbjct 32 FLGVCAAITAACVFWL--PIPSPAVMRDWAQSFGAVGLLVFLAAYAIITVTPVPRTIFTL 89
Query 92 AAGLLFGSVVGVFIAVVGSTASAVIAMLLVRA-TGWQLNSLVRRRAINRLDERLRERGWL 150
A+GLL+GS++GV ++V ST +AV+A L R G ++ S +R + ++L +RGWL
Sbjct 90 ASGLLYGSLLGVAVSVTASTLAAVLAFLFARRIAGERVQSYIRHPLAKHVQQQLSQRGWL 149
Query 151 AILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLL 210
A+ S+RLI VPFA NY G S VR++ + A+ GL+P T AVV+LGDA G P
Sbjct 150 AVWSVRLIAPVPFALQNYLCGVSTVRLVPYTLASFMGLIPMTTAVVLLGDATTGHFDPKF 209
Query 211 ILVSVCTGALGLTGLVYEIR 230
LVS C +GL GL R
Sbjct 210 FLVSACCITVGLVGLAINAR 229
>gi|296139811|ref|YP_003647054.1| hypothetical protein Tpau_2103 [Tsukamurella paurometabola DSM
20162]
gi|296027945|gb|ADG78715.1| SNARE associated Golgi protein-related protein [Tsukamurella
paurometabola DSM 20162]
Length=229
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 122/200 (61%), Gaps = 7/200 (3%)
Query 38 GITVLVVVA--LLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGL 95
G+ ++ VVA LL+P P +R WA S G WF F + H VVTV P PRT FT++AG
Sbjct 23 GLVIIAVVAAGLLMPHPAPSTIRAWADSTGPWFLALFFVAHVVVTVFPVPRTMFTVSAGF 82
Query 96 LFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLV-----RRRAINRLDERLRERGWL 150
LFG VVG+ + ++ ST +A+IA L VR + S V RA + RLR RGWL
Sbjct 83 LFGPVVGITVCMLASTLAAIIAFLGVREIDRRHPSEVIARLREHRAYAPVAARLRTRGWL 142
Query 151 AILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLL 210
A+ SLRLI PF+ +NYA+ S VR + AT+AGL PGT AVV+LGDA G P L
Sbjct 143 AVGSLRLIAPAPFSLVNYASALSPVRFWPYTVATVAGLAPGTIAVVLLGDALTGRSDPWL 202
Query 211 ILVSVCTGALGLTGLVYEIR 230
+ +SV ++GL GLV + R
Sbjct 203 VAISVGLMSVGLLGLVADAR 222
>gi|237785522|ref|YP_002906227.1| hypothetical protein ckrop_0930 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758434|gb|ACR17684.1| putative membrane protein [Corynebacterium kroppenstedtii DSM
44385]
Length=274
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/182 (44%), Positives = 119/182 (66%), Gaps = 3/182 (1%)
Query 50 PVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVG 109
P+P+ R+W+ G WFP AF V+ + T P PRT FTL+ G+LFG ++G+ +A++
Sbjct 73 PLPSVTTFRNWSVGAGWWFPFAFSAVYILATQFPIPRTVFTLSCGVLFGPLIGIGVALIS 132
Query 110 STASAVIAMLLVRATG--WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAIN 167
+ SA++++L+VR G W + S + A++ ++ LR RGWLA+ SLR++ VPF+ +N
Sbjct 133 TGCSALLSLLIVRRLGRDW-VQSRLTHPAVDGVNAHLRRRGWLAVGSLRMMAAVPFSVLN 191
Query 168 YAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVY 227
Y S ++ L F AT+ G PGT A V++GDA AG GSPL IL+SV +GLTGL+
Sbjct 192 YVCALSSIKALPFTLATIVGSAPGTIATVLVGDAAAGQGSPLTILISVVLFGVGLTGLIT 251
Query 228 EI 229
+I
Sbjct 252 DI 253
>gi|296393890|ref|YP_003658774.1| hypothetical protein Srot_1480 [Segniliparus rotundus DSM 44985]
gi|296181037|gb|ADG97943.1| SNARE associated Golgi protein-related protein [Segniliparus
rotundus DSM 44985]
Length=233
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/183 (46%), Positives = 116/183 (64%), Gaps = 1/183 (0%)
Query 49 VPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVV 108
+P+PT +RDWA+S GA + FL + ++TV P PRT FTLAAGLL+GS++GV I+V
Sbjct 41 LPIPTPAVMRDWAQSFGAAGLILFLAAYAIITVTPVPRTFFTLAAGLLYGSLLGVVISVT 100
Query 109 GSTASAVIAMLLVRA-TGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAIN 167
ST +AV+A L R G ++ + +R + +L ERGWLA+ S+RLI VPFA N
Sbjct 101 ASTLAAVLAFLFARRLAGERVQAYIRHPLAKHVQSQLSERGWLAVWSVRLIAPVPFALQN 160
Query 168 YAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVY 227
Y G S VR++ + A+ GL+P T AVV+LGDA G P+ +VS C +G+ GL+
Sbjct 161 YLCGVSTVRLVPYTVASCLGLIPMTTAVVLLGDATTGHFDPMFFVVSGCCITVGVIGLMV 220
Query 228 EIR 230
R
Sbjct 221 NSR 223
>gi|326382245|ref|ZP_08203937.1| hypothetical protein SCNU_04846 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198975|gb|EGD56157.1| hypothetical protein SCNU_04846 [Gordonia neofelifaecis NRRL
B-59395]
Length=256
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/197 (44%), Positives = 123/197 (63%), Gaps = 2/197 (1%)
Query 36 VVGITV-LVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAG 94
V+G+ V L++ A VP+P+ R W+ SLG WF F L + V+ + P PRTAFT+ AG
Sbjct 48 VMGLVVALLIAAYFVPLPSIATARTWSDSLGPWFFWLFFLAYAVIPIGPIPRTAFTVTAG 107
Query 95 LLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQ-LNSLVRRRAINRLDERLRERGWLAIL 153
+LF V A V ST +AV A L+ R G + + +R AI ++ RL+ RGWLA+
Sbjct 108 VLFPPAVAFVGATVSSTIAAVSAFLIARRLGRERVQPYLRHPAIAAIEYRLQRRGWLAVG 167
Query 154 SLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILV 213
SLRLI V PF+ +NY +G SG+R L + AT+ G+ PG AA++ LG+A G SP+ +L+
Sbjct 168 SLRLIAVCPFSLLNYLSGLSGIRFLPYVLATVVGMTPGNAALIFLGNALTGEASPISLLL 227
Query 214 SVCTGALGLTGLVYEIR 230
S ++G+ GLV + R
Sbjct 228 SAVLFSVGVIGLVIDTR 244
>gi|333919599|ref|YP_004493180.1| hypothetical protein AS9A_1931 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481820|gb|AEF40380.1| Conserved hypothetical membrane protein [Amycolicicoccus subflavus
DQS3-9A1]
Length=215
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/203 (42%), Positives = 121/203 (60%), Gaps = 2/203 (0%)
Query 49 VPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVV 108
VP+PT ELR+WA G FP+ F + + +VT+ P PRT FT+ GLLFG + G+ IA+
Sbjct 13 VPIPTVTELREWAAEFGPIFPILFFVANVLVTLFPIPRTMFTVTGGLLFGVLPGIMIAIG 72
Query 109 GSTASAVIAMLLVRATGWQL-NSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAIN 167
T SAVIA+LLVR G ++ + + ++ RL RGWLA+ SLRLI +PF+ +N
Sbjct 73 AGTLSAVIALLLVRVLGRDFVHARITAPTFHEVNARLARRGWLAVASLRLIAPIPFSVVN 132
Query 168 YAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVY 227
Y S VR+ FA AT G++PGT V++L DA G P L L+S +G+ GL+
Sbjct 133 YCCALSSVRVFPFAVATFFGMMPGTVGVILLADAVTGETDPRLALLSGALLGIGVIGLIA 192
Query 228 EIRNYRRQHRRMPGYDDPVREPA 250
+ + R+ + + DPV + A
Sbjct 193 DSKLGAREALHLQPH-DPVADAA 214
>gi|54025438|ref|YP_119680.1| hypothetical protein nfa34680 [Nocardia farcinica IFM 10152]
gi|54016946|dbj|BAD58316.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=228
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/203 (46%), Positives = 131/203 (65%), Gaps = 3/203 (1%)
Query 30 PRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAF 89
PRIV + G+ L VALLVP+PT +++DWA SLG WFP F L + +V V P PRT
Sbjct 8 PRIVVALAGLGALFAVALLVPLPTPQQIQDWAGSLGVWFPPLFFLFYALVAVAPVPRTVL 67
Query 90 TLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGW-QLNSLVRRRAINRLDERLRERG 148
T++ G+LFGS++G IA+ + +AV+A+LLVRA ++ + + A+ +D+RLR RG
Sbjct 68 TISCGVLFGSLLGSAIALSATAVAAVLALLLVRALDRDRVAARLTHPAVRAVDDRLRRRG 127
Query 149 WLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSP 208
WLA+ SLRLI PF+ +NY + +R+ + AT+ G PGT A VIL DA G P
Sbjct 128 WLAVGSLRLISFAPFSVVNYCCALTSIRVRPYLLATVVGSAPGTVATVILADALTGGTHP 187
Query 209 LLILVS-VCTGALGLTGLVYEIR 230
+++VS VC G +GL GLV + R
Sbjct 188 AMLVVSAVCLG-IGLVGLVVDAR 209
>gi|300781174|ref|ZP_07091028.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300532881|gb|EFK53942.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length=217
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/209 (39%), Positives = 122/209 (59%), Gaps = 7/209 (3%)
Query 31 RIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFT 90
RI +V + V + +L+ VP LR WA G WFP+ F L++ ++T P PRT T
Sbjct 6 RIAALLVAVVAFVALWMLLDVPDLATLRAWADQTGPWFPVVFWLLYILITQFPIPRTVMT 65
Query 91 LAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRR----AINRLDERLRE 146
++AG+LFG+V G+ +A+ +T + I++L+VR + L + R ++ +++RL E
Sbjct 66 ISAGILFGTVQGILLALTATTVAGTISLLIVR---FLLRDWIEPRLTHPSVLAINQRLEE 122
Query 147 RGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSG 206
RGWLAILSLR+I +PF+ +NY A + VR++ F ATL G PGT V I GD G
Sbjct 123 RGWLAILSLRMIAGIPFSILNYTAALTRVRVVPFTVATLIGSAPGTILVTIFGDTLTGEA 182
Query 207 SPLLILVSVCTGALGLTGLVYEIRNYRRQ 235
+P+ I + GL GL+ + R RQ
Sbjct 183 NPVFIAIMAVLAVAGLAGLLIDARLPTRQ 211
>gi|262202345|ref|YP_003273553.1| hypothetical protein Gbro_2418 [Gordonia bronchialis DSM 43247]
gi|262085692|gb|ACY21660.1| SNARE associated Golgi protein-like protein [Gordonia bronchialis
DSM 43247]
Length=283
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/184 (42%), Positives = 116/184 (64%), Gaps = 1/184 (0%)
Query 48 LVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAV 107
+P P+ +R W +SLG WF F + ++T+ P PR+ FT+ +G+ FG VVG A+
Sbjct 79 FLPTPSVAVVRSWGQSLGPWFAWLFFAAYAIITIAPIPRSTFTVMSGIFFGPVVGFTGAM 138
Query 108 VGSTASAVIAMLLVRATGW-QLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAI 166
+ ST +AV A LLVR G ++ +++ + ++ RL RGWLA+ SLRLI PF+
Sbjct 139 IASTVAAVAAFLLVRRLGRARVQPYLKKPVVAAVEYRLSRRGWLAVGSLRLIAACPFSVA 198
Query 167 NYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLV 226
NY + S VRI+ F A++ G+ PGTAAVV LGDA G+ +P+L++++ A+G+ GLV
Sbjct 199 NYCSALSSVRIVPFTVASVIGMAPGTAAVVFLGDALTGNRNPVLLVLTGLFFAVGIAGLV 258
Query 227 YEIR 230
+ R
Sbjct 259 LDAR 262
>gi|227833067|ref|YP_002834774.1| hypothetical protein cauri_1243 [Corynebacterium aurimucosum
ATCC 700975]
gi|227454083|gb|ACP32836.1| hypothetical protein cauri_1243 [Corynebacterium aurimucosum
ATCC 700975]
Length=246
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/243 (39%), Positives = 135/243 (56%), Gaps = 10/243 (4%)
Query 11 ETVHGIATSLGAVARQA----SLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGA 66
+V TSL A Q+ + R ++ T LV +A+LV VP+ LR W++ LG
Sbjct 7 HSVGDFCTSLARSAWQSCRRWTWKRWAAVILTGTALVFLAVLVDVPSLAALRSWSQHLGP 66
Query 67 WFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRA-TG 125
WF +AF + V T P PRT +TLAAGLLFG +G+ I++V T SA +++L+VR+ G
Sbjct 67 WFLIAFTGAYIVFTQFPMPRTVWTLAAGLLFGPWLGLVISLVALTISATVSLLIVRSLLG 126
Query 126 WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATL 185
+ + A+ ++ RL RGWLA+ SLR++ VPF+ +NY A + + +L F+ AT
Sbjct 127 EWIRPYLTHPAVYAINARLDRRGWLAVASLRMVAGVPFSLLNYVAALTPISVLQFSIATF 186
Query 186 AGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMPGYDDP 245
G +P TA V GDA G SP I+ V ALG+ GL+ + R PG P
Sbjct 187 IGSIPTTAIGVFFGDALTGKTSPYTIIGFVLAAALGIGGLILDTRLPLE-----PGMQRP 241
Query 246 VRE 248
V+
Sbjct 242 VKR 244
>gi|145295662|ref|YP_001138483.1| hypothetical protein cgR_1589 [Corynebacterium glutamicum R]
gi|140845582|dbj|BAF54581.1| hypothetical protein [Corynebacterium glutamicum R]
Length=254
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/213 (41%), Positives = 130/213 (62%), Gaps = 2/213 (0%)
Query 19 SLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTV 78
+L +VA+ ++ +I +VV I ++ V LV VP RDWA + G F L F + +
Sbjct 36 ALRSVAQWSAWKKIAVSVV-IVAIISVTFLVNVPPISVYRDWANNAGDAFVLVFCAFYIL 94
Query 79 VTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRAT-GWQLNSLVRRRAI 137
+T P PRT TLA+G+LFG V+G F+A+ +T SAVI++L+VR G + + A+
Sbjct 95 ITQFPIPRTVLTLASGVLFGPVLGSFVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAV 154
Query 138 NRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVI 197
+R++ RL +RGWLAI SLR+I +PF+ +NY A + V + SFA ATL G PGT V+
Sbjct 155 SRINNRLEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIITVV 214
Query 198 LGDAFAGSGSPLLILVSVCTGALGLTGLVYEIR 230
LGDA GSG+ + ++ LG+ G+ + +
Sbjct 215 LGDAVTGSGNWTAVAFTIFLAILGVLGIFLDQK 247
>gi|344045014|gb|EGV40688.1| hypothetical protein CgS9114_06810 [Corynebacterium glutamicum
S9114]
Length=254
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/213 (41%), Positives = 130/213 (62%), Gaps = 2/213 (0%)
Query 19 SLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTV 78
+L +VA+ ++ +I +VV I ++ V LV VP RDWA + G F L F + +
Sbjct 36 ALRSVAQWSAWKKIAVSVV-IVAIISVTFLVNVPPISVYRDWANNAGDAFVLVFCAFYIL 94
Query 79 VTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRAT-GWQLNSLVRRRAI 137
+T P PRT TLA+G+LFG V+G F+A+ +T SAVI++L+VR G + + A+
Sbjct 95 ITQFPIPRTVLTLASGVLFGPVLGSFVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAV 154
Query 138 NRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVI 197
+R++ RL +RGWLAI SLR+I +PF+ +NY A + V + SFA ATL G PGT V+
Sbjct 155 SRINTRLEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIITVV 214
Query 198 LGDAFAGSGSPLLILVSVCTGALGLTGLVYEIR 230
LGDA GSG+ + ++ LG+ G+ + +
Sbjct 215 LGDAVTGSGNWTAVAFTIFLAILGVLGIFLDQK 247
>gi|260578732|ref|ZP_05846639.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
gi|258603030|gb|EEW16300.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
Length=235
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/199 (40%), Positives = 115/199 (58%), Gaps = 2/199 (1%)
Query 41 VLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSV 100
+LV VP P ++R W S GAW PL F+++ T P PRT +T+AAG++FGS+
Sbjct 31 LLVAFVYFVPKPAVEDIRTWVASTGAWAPLTFVVLLVAFTQLPLPRTIWTIAAGVMFGSL 90
Query 101 VGVFIAVVGSTASAVIAMLLVRATG--WQLNSLVRRRAINRLDERLRERGWLAILSLRLI 158
G +A+VG ASA ++++LVRA G W + I L ER+ ERGW+A+L LR++
Sbjct 91 WGSVLALVGVGASAALSLILVRAVGGRWVEKKTQDAQRIQFLQERIAERGWIAVLGLRMV 150
Query 159 PVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTG 218
P +PF+ +NYA G S + + + AT+ G P T A + DA A G P ++L+SV
Sbjct 151 PAIPFSLLNYACGLSRIPFVPYVLATIVGSAPNTIATAMASDALATGGQPWILLLSVVVV 210
Query 219 ALGLTGLVYEIRNYRRQHR 237
G EIR +R+ +
Sbjct 211 CAGFALAANEIRLWRQLRK 229
>gi|19552744|ref|NP_600746.1| hypothetical protein NCgl1473 [Corynebacterium glutamicum ATCC
13032]
gi|62390413|ref|YP_225815.1| hypothetical protein cg1727 [Corynebacterium glutamicum ATCC
13032]
gi|41325750|emb|CAF21539.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032]
Length=258
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/213 (41%), Positives = 129/213 (61%), Gaps = 2/213 (0%)
Query 19 SLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTV 78
+L +VA+ ++ +I +VV I ++ V LV VP RDWA + G F L F + +
Sbjct 40 ALRSVAQWSAWKKIAVSVV-IVAIISVTFLVDVPPISVYRDWANNAGDAFVLVFCAFYIL 98
Query 79 VTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRAT-GWQLNSLVRRRAI 137
+T P PRT TLA+G+LFG V+G +A+ +T SAVI++L+VR G + + A+
Sbjct 99 ITQFPIPRTVLTLASGVLFGPVLGSVVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAV 158
Query 138 NRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVI 197
+R++ RL +RGWLAI SLR+I +PF+ +NY A + V + SFA ATL G PGT V+
Sbjct 159 SRINTRLEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIVTVV 218
Query 198 LGDAFAGSGSPLLILVSVCTGALGLTGLVYEIR 230
LGDA GSG+ + +V LG+ G+ + +
Sbjct 219 LGDAVTGSGNWTAVAFTVFLAILGVLGIFLDQK 251
>gi|331695375|ref|YP_004331614.1| hypothetical protein Psed_1522 [Pseudonocardia dioxanivorans
CB1190]
gi|326950064|gb|AEA23761.1| SNARE associated Golgi protein-like protein [Pseudonocardia dioxanivorans
CB1190]
Length=237
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/182 (46%), Positives = 111/182 (61%), Gaps = 1/182 (0%)
Query 51 VPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGS 110
VP ++R + G W PLAFL + +TV P PRT FTL AG LFG G+ + +V +
Sbjct 29 VPGMSDVRATVAAAGVWAPLAFLALQAGLTVGPVPRTVFTLVAGALFGWAAGLVLTLVAT 88
Query 111 TASAVIAMLLVRATGWQL-NSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYA 169
T +AV+A LVR TG +L R RA++ + RL G LA+ SLRL+P VPFAA+NY
Sbjct 89 TLAAVVAFALVRVTGGRLVERYARGRAVDWVRLRLDHHGLLAVTSLRLVPAVPFAALNYV 148
Query 170 AGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEI 229
AG S VR + T G++PGT A+V+LGDA G+ P L++VS G +GL G+V
Sbjct 149 AGLSAVRFWPYLLGTAVGIVPGTVAIVVLGDAVTGTPPPALVVVSAVCGLVGLAGVVVAA 208
Query 230 RN 231
R
Sbjct 209 RR 210
>gi|68536038|ref|YP_250743.1| hypothetical protein jk0961 [Corynebacterium jeikeium K411]
gi|68263637|emb|CAI37125.1| putative membrane protein [Corynebacterium jeikeium K411]
Length=235
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/199 (39%), Positives = 114/199 (58%), Gaps = 2/199 (1%)
Query 41 VLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSV 100
+LV VP P ++R W S GAW PL F+++ T P PRT +T+AAG++FGS+
Sbjct 31 LLVAFVYFVPKPAVDDIRTWVDSTGAWAPLTFVVLLVAFTQLPLPRTIWTIAAGVMFGSL 90
Query 101 VGVFIAVVGSTASAVIAMLLVRATG--WQLNSLVRRRAINRLDERLRERGWLAILSLRLI 158
G +A+VG ASA ++++LV A G W + I L ER+ ERGW+A+L +R++
Sbjct 91 WGSVLALVGVGASAALSLILVHAVGGTWVEKKTRNDQRIQLLQERIAERGWIAVLGMRMV 150
Query 159 PVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTG 218
P +PF+ +NYA G S + + + AT+ G P T A + DA A G P ++L+SV
Sbjct 151 PAIPFSLLNYACGLSRIPFVPYVLATIFGSAPNTIATAMASDALATGGQPWILLLSVVVV 210
Query 219 ALGLTGLVYEIRNYRRQHR 237
G EIR +R+ +
Sbjct 211 CAGFALAANEIRLWRKLRK 229
>gi|21324299|dbj|BAB98924.1| Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032]
Length=241
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/213 (41%), Positives = 129/213 (61%), Gaps = 2/213 (0%)
Query 19 SLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTV 78
+L +VA+ ++ +I +VV I ++ V LV VP RDWA + G F L F + +
Sbjct 23 ALRSVAQWSAWKKIAVSVV-IVAIISVTFLVDVPPISVYRDWANNAGDAFVLVFCAFYIL 81
Query 79 VTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRAT-GWQLNSLVRRRAI 137
+T P PRT TLA+G+LFG V+G +A+ +T SAVI++L+VR G + + A+
Sbjct 82 ITQFPIPRTVLTLASGVLFGPVLGSVVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAV 141
Query 138 NRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVI 197
+R++ RL +RGWLAI SLR+I +PF+ +NY A + V + SFA ATL G PGT V+
Sbjct 142 SRINTRLEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIVTVV 201
Query 198 LGDAFAGSGSPLLILVSVCTGALGLTGLVYEIR 230
LGDA GSG+ + +V LG+ G+ + +
Sbjct 202 LGDAVTGSGNWTAVAFTVFLAILGVLGIFLDQK 234
>gi|38233859|ref|NP_939626.1| hypothetical protein DIP1274 [Corynebacterium diphtheriae NCTC
13129]
gi|38200120|emb|CAE49801.1| Putative membrane protein [Corynebacterium diphtheriae]
Length=233
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 119/200 (60%), Gaps = 7/200 (3%)
Query 37 VGITVLVVVAL----LVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLA 92
+G T+L V L ++ VP LR WA + GAWF + F ++ +T P PRT TL+
Sbjct 28 LGFTLLCCVFLAATVIIDVPPLTVLRTWADNTGAWFVVVFTALYISITQFPIPRTLLTLS 87
Query 93 AGLLFGSVVGVFIAVVGSTASAVIAMLLVRAT--GWQLNSLVRRRAINRLDERLRERGWL 150
+G+LFG + G+ IA++ +TASA++++L+VR W + L A+ R++ + +RGW
Sbjct 88 SGILFGPLAGIVIALLSTTASAMLSLLIVRRILGDWTRSRLTSANAV-RVNHHIEQRGWF 146
Query 151 AILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLL 210
A+ SLR+I VPF+ +NY AG + + ++SF AT G PGT V +G+ A S L
Sbjct 147 AVASLRMIAAVPFSLLNYVAGMTNISLISFGLATCIGSTPGTIVTVFIGNGLAQSYDATL 206
Query 211 ILVSVCTGALGLTGLVYEIR 230
+ ++C LGL GL+ + R
Sbjct 207 FIPTICLAILGLCGLIIDSR 226
>gi|213965597|ref|ZP_03393791.1| putative membrane protein [Corynebacterium amycolatum SK46]
gi|213951756|gb|EEB63144.1| putative membrane protein [Corynebacterium amycolatum SK46]
Length=223
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/153 (48%), Positives = 99/153 (65%), Gaps = 3/153 (1%)
Query 51 VPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGS 110
VPT +R W+ G WFPL + L + +T P PRT FTLA+G+LFG V+G +A+ +
Sbjct 33 VPTVATIRQWSIDAGDWFPLLYFLAYVALTQFPIPRTVFTLASGILFGPVLGFLLAITAT 92
Query 111 TASAVIAMLLVRATG--WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINY 168
T SA++++ +VR G W L RR ++ LD RL +RGWL +LSLR+I VPF+ +NY
Sbjct 93 TVSALLSLCIVRFLGRDWIRTHLTNRRLLS-LDHRLEQRGWLTVLSLRMIAGVPFSFLNY 151
Query 169 AAGASGVRILSFAWATLAGLLPGTAAVVILGDA 201
A G S +RI+ + AT G P T AVV+LGDA
Sbjct 152 ACGLSSIRIVPYIIATALGSAPNTLAVVLLGDA 184
>gi|262182443|ref|ZP_06041864.1| hypothetical protein CaurA7_00484 [Corynebacterium aurimucosum
ATCC 700975]
Length=204
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/207 (41%), Positives = 121/207 (59%), Gaps = 6/207 (2%)
Query 43 VVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVG 102
+ +A+LV VP+ LR W++ LG WF +AF + V T P PRT +TLAAGLLFG +G
Sbjct 1 MFLAVLVDVPSLAALRSWSQHLGPWFLIAFTGAYIVFTQFPMPRTVWTLAAGLLFGPWLG 60
Query 103 VFIAVVGSTASAVIAMLLVRAT-GWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVV 161
+ I++V T SA +++L+VR+ G + + A+ ++ RL RGWLA+ SLR++ V
Sbjct 61 LVISLVALTISATVSLLIVRSLLGEWIRPYLTHPAVYAINARLDRRGWLAVASLRMVAGV 120
Query 162 PFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALG 221
PF+ +NY A + + +L F+ AT G +P TA V GDA G SP I+ V ALG
Sbjct 121 PFSLLNYVAALTPISVLQFSIATFIGSIPTTAIGVFFGDALTGKTSPYTIIGFVLAAALG 180
Query 222 LTGLVYEIRNYRRQHRRMPGYDDPVRE 248
+ GL+ + R PG PV+
Sbjct 181 IGGLILDTRLPLE-----PGMQRPVKR 202
>gi|257056395|ref|YP_003134227.1| hypothetical protein Svir_24030 [Saccharomonospora viridis DSM
43017]
gi|256586267|gb|ACU97400.1| uncharacterized conserved protein [Saccharomonospora viridis
DSM 43017]
Length=232
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/207 (41%), Positives = 120/207 (58%), Gaps = 3/207 (1%)
Query 31 RIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFT 90
+++ V + VL V+A+LVP+P +LR WA+ LG +AF + V T P PRT F
Sbjct 9 KVIVGFVALGVLAVMAVLVPIPGPTQLRTWAEGLGGVGVVAFFAAYAVFTAAPIPRTVFN 68
Query 91 LAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQ--LNSLVRRRAINRLDERLRERG 148
LAAGLLFG VGV +A+ + S ++ LL R+ G L L R+ + +++RL G
Sbjct 69 LAAGLLFGEFVGVSVALASTVLSGLLGFLLARSLGRDAVLRQL-HRKPVRLVNDRLAHGG 127
Query 149 WLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSP 208
LA+ SLRLIPV+PFA ++Y G S + + + T G PGT AVV+LGDA G+ P
Sbjct 128 ALAVASLRLIPVIPFAPLSYLCGVSSLPLRPYLVGTAVGSFPGTVAVVVLGDALTGTTPP 187
Query 209 LLILVSVCTGALGLTGLVYEIRNYRRQ 235
LI+ V LG G++ R+ ++
Sbjct 188 SLIVCYVTFALLGALGVLRATRSTEQK 214
>gi|25028208|ref|NP_738262.1| hypothetical protein CE1652 [Corynebacterium efficiens YS-314]
gi|23493492|dbj|BAC18462.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=287
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/182 (44%), Positives = 112/182 (62%), Gaps = 3/182 (1%)
Query 51 VPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGS 110
+P+ LRDWA S G F F+ ++ V+T P PRT TLA+G+LFG G IA+ +
Sbjct 100 IPSITTLRDWADSAGPAFVWLFVGLYVVITQFPIPRTVLTLASGVLFGPWQGTLIALGST 159
Query 111 TASAVIAMLLVRAT--GWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINY 168
T SA +++L+VR GW L A+ R++ RLR+RGWLAI SLR+I VPF+ +NY
Sbjct 160 TVSAALSLLIVRGLLGGWMRPRLTHP-AVARINARLRDRGWLAIASLRMIAAVPFSLLNY 218
Query 169 AAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYE 228
A + V +L+F AT G PGT A V+LGDA GSGS ++ ++ LG+ GL+ +
Sbjct 219 VAALTSVPLLAFTVATAVGSAPGTIATVVLGDAVVGSGSATAVVFTIALACLGVVGLILD 278
Query 229 IR 230
R
Sbjct 279 RR 280
>gi|305681348|ref|ZP_07404155.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266]
gi|305659553|gb|EFM49053.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266]
Length=232
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/210 (39%), Positives = 125/210 (60%), Gaps = 3/210 (1%)
Query 22 AVARQASLPRIVGTVVGITV--LVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVV 79
A A S P VVG+ V ++++ V VP+ + WA G WF + F+ + VV
Sbjct 15 AAASIRSWPLWRKLVVGLLVVGMIIITFTVKVPSLATMNAWAAGTGRWFVMVFVFGYVVV 74
Query 80 TVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRAT-GWQLNSLVRRRAIN 138
T P PRT FTL++G+LFG +G+ +A+ +T SA +++ +VR G + + A++
Sbjct 75 TQFPIPRTIFTLSSGVLFGPWLGIVVALTATTVSAAVSLSVVRYLLGDWMAPRLAHPAVS 134
Query 139 RLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVIL 198
++ RLR RGWLA+ SLR+I VPF+ +NYAA + V ++ F ATL G PGT A V L
Sbjct 135 GINARLRARGWLAVTSLRMIAGVPFSVLNYAAALTSVPLVGFTVATLVGSAPGTIATVFL 194
Query 199 GDAFAGSGSPLLILVSVCTGALGLTGLVYE 228
G+ G P +++++VC +G+ GLV++
Sbjct 195 GNTLTGKADPTIMVITVCLTCVGVLGLVFD 224
>gi|259507267|ref|ZP_05750167.1| membrane protein [Corynebacterium efficiens YS-314]
gi|259165141|gb|EEW49695.1| membrane protein [Corynebacterium efficiens YS-314]
Length=254
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/182 (44%), Positives = 112/182 (62%), Gaps = 3/182 (1%)
Query 51 VPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGS 110
+P+ LRDWA S G F F+ ++ V+T P PRT TLA+G+LFG G IA+ +
Sbjct 67 IPSITTLRDWADSAGPAFVWLFVGLYVVITQFPIPRTVLTLASGVLFGPWQGTLIALGST 126
Query 111 TASAVIAMLLVRAT--GWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINY 168
T SA +++L+VR GW L A+ R++ RLR+RGWLAI SLR+I VPF+ +NY
Sbjct 127 TVSAALSLLIVRGLLGGWMRPRLTHP-AVARINARLRDRGWLAIASLRMIAAVPFSLLNY 185
Query 169 AAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYE 228
A + V +L+F AT G PGT A V+LGDA GSGS ++ ++ LG+ GL+ +
Sbjct 186 VAALTSVPLLAFTVATAVGSAPGTIATVVLGDAVVGSGSATAVVFTIALACLGVVGLILD 245
Query 229 IR 230
R
Sbjct 246 RR 247
>gi|225021417|ref|ZP_03710609.1| hypothetical protein CORMATOL_01436 [Corynebacterium matruchotii
ATCC 33806]
gi|224945799|gb|EEG27008.1| hypothetical protein CORMATOL_01436 [Corynebacterium matruchotii
ATCC 33806]
Length=221
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/196 (39%), Positives = 120/196 (62%), Gaps = 3/196 (1%)
Query 36 VVGITV--LVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAA 93
VVG+ V ++++ V VP+ + WA G WF + F+ + VVT P PRT FTL++
Sbjct 18 VVGLLVVGMIIITFTVKVPSLATMNAWAAGTGRWFVMVFVFGYVVVTQFPIPRTIFTLSS 77
Query 94 GLLFGSVVGVFIAVVGSTASAVIAMLLVRA-TGWQLNSLVRRRAINRLDERLRERGWLAI 152
G+LFG +G+ +A+ +T SA +++ +VR G + + A+ ++ RLR RGWLA+
Sbjct 78 GVLFGPWLGIVVALTATTVSAAVSLSVVRYFLGDWMAPRLAHPAVAGINARLRARGWLAV 137
Query 153 LSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLIL 212
SLR+I VPF+ +NYAA + V ++ F ATL G PGT A V LG+ G P +++
Sbjct 138 TSLRMIAGVPFSVLNYAAALTSVPLVGFTVATLVGSAPGTIATVFLGNTLTGKADPTIMV 197
Query 213 VSVCTGALGLTGLVYE 228
++VC +G+ GLV++
Sbjct 198 ITVCLTCVGVLGLVFD 213
>gi|227488911|ref|ZP_03919227.1| YdjX-Z family protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227091095|gb|EEI26407.1| YdjX-Z family protein [Corynebacterium glucuronolyticum ATCC
51867]
Length=260
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/235 (38%), Positives = 128/235 (55%), Gaps = 9/235 (3%)
Query 6 ICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLG 65
C T T IAT + A R L IV V + +L+ V VP+ LR WA G
Sbjct 21 FCRTVVT-DAIATFM-AFPRWKKLALIVAAVTAVALLI----FVDVPSVELLRQWADKAG 74
Query 66 AWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRA-- 123
WF L + L++ T P PRT FTL +G+ FG V G +A+ +T SA+I+ ++VR
Sbjct 75 DWFFLLYFLIYVFFTQFPIPRTFFTLMSGIFFGPVRGCLLALTATTVSAIISFVIVRHFL 134
Query 124 TGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWA 183
W L A+ +DERLR+RGWL++ LR+I +PF +NY+ S +R L + A
Sbjct 135 RDWMAPKL-SHPAVAGIDERLRQRGWLSVTCLRMIAGIPFFVLNYSTAVSSIRFLPYIVA 193
Query 184 TLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRR 238
T G P T A+V+LGD G +P L+LVS LG++GL+ + + R++R
Sbjct 194 TFIGSAPNTIAIVLLGDTLTGHVNPALLLVSAVLLVLGVSGLILDAKLPVRENRH 248
>gi|300858489|ref|YP_003783472.1| hypothetical protein cpfrc_01072 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685943|gb|ADK28865.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
Length=210
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/198 (40%), Positives = 119/198 (61%), Gaps = 1/198 (0%)
Query 41 VLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSV 100
+ ++ +LV +P+ LR WA + G+ F + F ++ +T P PRT TL+AG+LFGS+
Sbjct 13 LFILTTILVDIPSIETLRSWADNAGSAFVILFAFLYIGITQFPIPRTLLTLSAGVLFGSI 72
Query 101 VGVFIAVVGSTASAVIAMLLVRAT-GWQLNSLVRRRAINRLDERLRERGWLAILSLRLIP 159
G+ IA+ +T SAVI++L++R G + + A++ ++ RLR RGWLA+ SLR+I
Sbjct 73 KGIVIALTCTTISAVISLLIIRTLLGEWMEPRLTHPAVSGINSRLRHRGWLAVASLRMIA 132
Query 160 VVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGA 219
VPF+ +NY A + V L FA ATL G PGT VVILGD+ ++L SV
Sbjct 133 GVPFSIMNYVAALTSVPPLGFALATLIGSAPGTIVVVILGDSILHGTDVKILLFSVALAF 192
Query 220 LGLTGLVYEIRNYRRQHR 237
LG+ GL+ + R + R
Sbjct 193 LGILGLLIDARMPVKTPR 210
>gi|302330757|gb|ADL20951.1| Hypothetical protein Cp1002_1066 [Corynebacterium pseudotuberculosis
1002]
gi|308276440|gb|ADO26339.1| Putative membrane protein [Corynebacterium pseudotuberculosis
I19]
gi|341824881|gb|AEK92402.1| Hypothetical protein CpPAT10_1065 [Corynebacterium pseudotuberculosis
PAT10]
Length=233
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/191 (41%), Positives = 117/191 (62%), Gaps = 1/191 (0%)
Query 41 VLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSV 100
+ ++ +LV +P+ LR WA + G+ F + F ++ +T P PRT TL+AG+LFGS+
Sbjct 36 LFILTTILVDIPSIETLRSWADNAGSAFVILFAFLYIGITQFPIPRTLLTLSAGVLFGSI 95
Query 101 VGVFIAVVGSTASAVIAMLLVRAT-GWQLNSLVRRRAINRLDERLRERGWLAILSLRLIP 159
G+ IA+ +T SAVI++L++R G + + A++ ++ RLR RGWLA+ SLR+I
Sbjct 96 KGIVIALTCTTISAVISLLIIRTLLGEWMEPRLTHPAVSGINSRLRHRGWLAVASLRMIA 155
Query 160 VVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGA 219
VPF+ +NY A + V L FA ATL G PGT VVILGD+ ++L SV
Sbjct 156 GVPFSIMNYVAALTSVPPLGFALATLIGSAPGTIVVVILGDSILHGTDVKILLFSVALAF 215
Query 220 LGLTGLVYEIR 230
LG+ GL+ + R
Sbjct 216 LGILGLLIDAR 226
Lambda K H
0.326 0.140 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 365242488240
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40