BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1492 Length=615 Score E Sequences producing significant alignments: (Bits) Value gi|148822713|ref|YP_001287467.1| methylmalonyl-CoA mutase small ... 1212 0.0 gi|254364363|ref|ZP_04980409.1| methylmalonyl-CoA mutase small s... 1210 0.0 gi|15608630|ref|NP_216008.1| methylmalonyl-CoA mutase small subu... 1209 0.0 gi|298525002|ref|ZP_07012411.1| methylmalonyl-CoA mutase small s... 1207 0.0 gi|183982315|ref|YP_001850606.1| methylmalonyl-CoA mutase small ... 895 0.0 gi|41407323|ref|NP_960159.1| MutA [Mycobacterium avium subsp. pa... 893 0.0 gi|118617165|ref|YP_905497.1| methylmalonyl-CoA mutase small sub... 893 0.0 gi|336458053|gb|EGO37040.1| methylmalonyl-CoA mutase, heterodime... 890 0.0 gi|240167874|ref|ZP_04746533.1| methylmalonyl-CoA mutase small s... 889 0.0 gi|118466038|ref|YP_882460.1| methylmalonyl-CoA mutase, small su... 875 0.0 gi|296170636|ref|ZP_06852212.1| methylmalonyl-CoA mutase [Mycoba... 871 0.0 gi|342858788|ref|ZP_08715443.1| methylmalonyl-CoA mutase, beta s... 868 0.0 gi|15827959|ref|NP_302222.1| methylmalonyl-CoA mutase, [beta] su... 861 0.0 gi|308400509|ref|ZP_07493183.2| methylmalonyl-CoA mutase, small ... 842 0.0 gi|254819568|ref|ZP_05224569.1| methylmalonyl-CoA mutase, small ... 808 0.0 gi|118467931|ref|YP_887473.1| methylmalonyl-CoA mutase, small su... 784 0.0 gi|108800089|ref|YP_640286.1| methylmalonyl-CoA mutase, small su... 782 0.0 gi|126435713|ref|YP_001071404.1| methylmalonyl-CoA mutase subuni... 777 0.0 gi|167969301|ref|ZP_02551578.1| methylmalonyl-CoA mutase small s... 746 0.0 gi|120403746|ref|YP_953575.1| methylmalonyl-CoA mutase subunit b... 738 0.0 gi|289745244|ref|ZP_06504622.1| methylmalonyl-CoA mutase small s... 714 0.0 gi|333990862|ref|YP_004523476.1| methylmalonyl-CoA mutase small ... 711 0.0 gi|145224234|ref|YP_001134912.1| methylmalonyl-CoA mutase subuni... 702 0.0 gi|315444569|ref|YP_004077448.1| methylmalonyl-CoA mutase, heter... 701 0.0 gi|169629796|ref|YP_001703445.1| methylmalonyl-CoA mutase small ... 574 1e-161 gi|325676891|ref|ZP_08156564.1| methylmalonyl-CoA mutase [Rhodoc... 549 6e-154 gi|312139662|ref|YP_004006998.1| methylmalonyl-CoA mutase muta [... 546 6e-153 gi|226306575|ref|YP_002766535.1| methylmalonyl-CoA mutase small ... 538 1e-150 gi|226366426|ref|YP_002784209.1| methylmalonyl-CoA mutase small ... 537 2e-150 gi|229493523|ref|ZP_04387308.1| methylmalonyl-CoA mutase, small ... 536 6e-150 gi|111024183|ref|YP_707155.1| methylmalonyl-CoA mutase small sub... 529 7e-148 gi|54025437|ref|YP_119679.1| putative methylmalonyl-CoA mutase s... 508 1e-141 gi|333919600|ref|YP_004493181.1| methylmalonyl-CoA mutase [Amyco... 500 3e-139 gi|213965564|ref|ZP_03393758.1| methylmalonyl-CoA mutase, small ... 482 9e-134 gi|167968015|ref|ZP_02550292.1| methylmalonyl-CoA mutase small s... 479 5e-133 gi|343927976|ref|ZP_08767442.1| methylmalonyl-CoA mutase small s... 478 9e-133 gi|227542094|ref|ZP_03972143.1| methylmalonyl-CoA mutase [Coryne... 467 3e-129 gi|227488912|ref|ZP_03919228.1| methylmalonyl-CoA mutase [Coryne... 467 3e-129 gi|319949213|ref|ZP_08023300.1| methylmalonyl-CoA mutase, beta s... 464 2e-128 gi|237785521|ref|YP_002906226.1| methylmalonyl-CoA mutase small ... 456 5e-126 gi|262202346|ref|YP_003273554.1| methylmalonyl-CoA mutase [Gordo... 449 6e-124 gi|25028207|ref|NP_738261.1| putative methylmalonyl-CoA mutase s... 444 3e-122 gi|145295661|ref|YP_001138482.1| hypothetical protein cgR_1588 [... 443 4e-122 gi|344045015|gb|EGV40689.1| hypothetical protein CgS9114_06815 [... 441 2e-121 gi|19552743|ref|NP_600745.1| methylmalonyl-CoA mutase N-terminal... 441 2e-121 gi|307084071|ref|ZP_07493184.1| hypothetical protein TMLG_00478 ... 438 1e-120 gi|225021418|ref|ZP_03710610.1| hypothetical protein CORMATOL_01... 435 1e-119 gi|305681235|ref|ZP_07404042.1| putative methylmalonyl-CoA mutas... 433 6e-119 gi|296139812|ref|YP_003647055.1| methylmalonyl-CoA mutase [Tsuka... 425 1e-116 gi|300858488|ref|YP_003783471.1| methylmalonyl-CoA mutase small ... 425 1e-116 >gi|148822713|ref|YP_001287467.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis F11] gi|253799456|ref|YP_003032457.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis KZN 1435] gi|148721240|gb|ABR05865.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis F11] gi|253320959|gb|ACT25562.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis KZN 1435] Length=623 Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust. Identities = 615/615 (100%), Positives = 615/615 (100%), Gaps = 0/615 (0%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT Sbjct 9 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 68 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 120 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL Sbjct 69 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 128 Query 121 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 180 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI Sbjct 129 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 188 Query 181 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 240 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV Sbjct 189 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 248 Query 241 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 300 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG Sbjct 249 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 308 Query 301 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 360 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG Sbjct 309 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 368 Query 361 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 420 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH Sbjct 369 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 428 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD 480 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD Sbjct 429 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD 488 Query 481 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA 540 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA Sbjct 489 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA 548 Query 541 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI 600 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI Sbjct 549 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI 608 Query 601 NVVQALSNLLTRLGA 615 NVVQALSNLLTRLGA Sbjct 609 NVVQALSNLLTRLGA 623 >gi|254364363|ref|ZP_04980409.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis str. Haarlem] gi|134149877|gb|EBA41922.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis str. Haarlem] Length=623 Score = 1210 bits (3130), Expect = 0.0, Method: Compositional matrix adjust. Identities = 614/615 (99%), Positives = 614/615 (99%), Gaps = 0/615 (0%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT Sbjct 9 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 68 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 120 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL Sbjct 69 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 128 Query 121 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 180 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI Sbjct 129 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 188 Query 181 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 240 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAA V Sbjct 189 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAAIV 248 Query 241 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 300 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG Sbjct 249 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 308 Query 301 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 360 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG Sbjct 309 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 368 Query 361 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 420 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH Sbjct 369 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 428 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD 480 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD Sbjct 429 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD 488 Query 481 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA 540 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA Sbjct 489 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA 548 Query 541 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI 600 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI Sbjct 549 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI 608 Query 601 NVVQALSNLLTRLGA 615 NVVQALSNLLTRLGA Sbjct 609 NVVQALSNLLTRLGA 623 >gi|15608630|ref|NP_216008.1| methylmalonyl-CoA mutase small subunit [Mycobacterium tuberculosis H37Rv] gi|15840955|ref|NP_335992.1| methylmalonyl-CoA mutase, beta subunit [Mycobacterium tuberculosis CDC1551] gi|31792688|ref|NP_855181.1| methylmalonyl-CoA mutase small subunit [Mycobacterium bovis AF2122/97] 69 more sequence titles Length=615 Score = 1209 bits (3129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 614/615 (99%), Positives = 615/615 (100%), Gaps = 0/615 (0%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT Sbjct 1 MSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 120 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL Sbjct 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 120 Query 121 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 180 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI Sbjct 121 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 180 Query 181 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 240 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV Sbjct 181 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 240 Query 241 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 300 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG Sbjct 241 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 300 Query 301 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 360 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG Sbjct 301 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 360 Query 361 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 420 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH Sbjct 361 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 420 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD 480 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD Sbjct 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD 480 Query 481 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA 540 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA Sbjct 481 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA 540 Query 541 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI 600 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI Sbjct 541 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI 600 Query 601 NVVQALSNLLTRLGA 615 NVVQALSNLLTRLGA Sbjct 601 NVVQALSNLLTRLGA 615 >gi|298525002|ref|ZP_07012411.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis 94_M4241A] gi|298494796|gb|EFI30090.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis 94_M4241A] Length=615 Score = 1207 bits (3124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 613/615 (99%), Positives = 614/615 (99%), Gaps = 0/615 (0%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT Sbjct 1 MSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 120 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGV AL Sbjct 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVGAL 120 Query 121 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 180 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI Sbjct 121 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 180 Query 181 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 240 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV Sbjct 181 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 240 Query 241 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 300 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG Sbjct 241 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 300 Query 301 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 360 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG Sbjct 301 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 360 Query 361 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 420 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH Sbjct 361 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 420 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD 480 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD Sbjct 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRD 480 Query 481 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA 540 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA Sbjct 481 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA 540 Query 541 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI 600 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI Sbjct 541 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI 600 Query 601 NVVQALSNLLTRLGA 615 NVVQALSNLLTRLGA Sbjct 601 NVVQALSNLLTRLGA 615 >gi|183982315|ref|YP_001850606.1| methylmalonyl-CoA mutase small subunit, MutA [Mycobacterium marinum M] gi|183175641|gb|ACC40751.1| methylmalonyl-CoA mutase small subunit, MutA [Mycobacterium marinum M] Length=625 Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/625 (77%), Positives = 527/625 (85%), Gaps = 10/625 (1%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVPE A+LEQVR RWR+AVAGVLSK+ R DSA GD PERLL+T T DG AIRALY+ Sbjct 1 MSIDVPELAELEQVRERWRSAVAGVLSKTARPDSAGFGDQPERLLNTPTYDGIAIRALYS 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFP-ANGATADTNAAVLAALGEGVSA 119 AFDELPEPPLPG+WP+VRGGD LRDV SGWKV EA P + + D N A+L LG+GVSA Sbjct 61 AFDELPEPPLPGEWPYVRGGDALRDVSSGWKVVEAVPRPDASVVDANQALLGVLGDGVSA 120 Query 120 LLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLS 179 LL+RVG+ GVAPD+L LL+GVYLNLAPVI+DAGA YR A + ML L A LD QR T+S Sbjct 121 LLVRVGDRGVAPDQLEGLLAGVYLNLAPVIVDAGAQYRAASEAMLRLAAGLDTDQRATMS 180 Query 180 IDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAAT 239 IDLGADPLTA+L RPAP I++V+A+A R AG+RG+R ITVDGPAFHNLGATAA ELAAT Sbjct 181 IDLGADPLTATLSGRPAPAIDDVLAIAGRVAGDRGVRTITVDGPAFHNLGATAAWELAAT 240 Query 240 VAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPG 299 + AAVAYLR+LTESGL + DAL QI RLAADDDQFMTLAKMRA R+LWARVAEV GDP Sbjct 241 IGAAVAYLRLLTESGLSIGDALAQIGLRLAADDDQFMTLAKMRAARRLWARVAEVAGDPD 300 Query 300 GGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAA 359 GGAA +HAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAI GGFPGTA Sbjct 301 GGAATLHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIAGGFPGTAT 360 Query 360 GFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEA 419 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVE+LT+ LA+ AWQ FQAIEARGGF A Sbjct 361 SFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEDLTEELAQHAWQHFQAIEARGGFANA 420 Query 420 HDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALP-PGDPTSP-----VRRYAA 473 HD++AGQIAE AARRADDIAHRR+AITGVNE+PNL EP LP P SP + RY A Sbjct 421 HDYVAGQIAELAARRADDIAHRRIAITGVNEFPNLDEPPLPQPDRGFSPDGCGKLLRYGA 480 Query 474 GFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAG 533 FEALRDRSD +L+ TGARPRVLLLPLGPLAEHNIR TFA+NLLASGGIEA +PGTVDA Sbjct 481 EFEALRDRSDAYLSGTGARPRVLLLPLGPLAEHNIRATFASNLLASGGIEAFNPGTVDAQ 540 Query 534 TVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKAL---GDAAH 590 V AVA+AGSP+VAVICGTD RYRDE +V+AAR+AG+SRVYLAGP AL D A Sbjct 541 GVATAVAEAGSPTVAVICGTDRRYRDEAPAVVEAARSAGISRVYLAGPPGALDEAADVAS 600 Query 591 RPDEFLTAKINVVQALSNLLTRLGA 615 RPDEFLTAKIN VQALS+LLTRLGA Sbjct 601 RPDEFLTAKINAVQALSDLLTRLGA 625 >gi|41407323|ref|NP_960159.1| MutA [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395675|gb|AAS03542.1| MutA [Mycobacterium avium subsp. paratuberculosis K-10] Length=625 Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/625 (75%), Positives = 524/625 (84%), Gaps = 10/625 (1%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVPE ADLEQVRGRWR+AVAGVL+KS R D QLGD PERLL+T T DG AIRALYT Sbjct 1 MSIDVPELADLEQVRGRWRSAVAGVLAKSTRKDPEQLGDAPERLLETPTYDGIAIRALYT 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANG----ATADTNAAVLAALGEG 116 A DELPEPPLPG+WPFVRGGD LRDV SGWKVAEAFPA A D N+AVL ALG G Sbjct 61 ALDELPEPPLPGEWPFVRGGDALRDVRSGWKVAEAFPATPVPGVAAKDINSAVLEALGNG 120 Query 117 VSALLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRD 176 A+L+R+GESGVAPD++ L GVYL++AP+IL+AGADY A D +L L +++P QR Sbjct 121 AGAVLLRIGESGVAPDQVADSLQGVYLSMAPLILEAGADYPGASDAVLGLANEIEPDQRA 180 Query 177 TLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATEL 236 T+SIDL DPLTA L RPAP +++VVAVA RAAG G+RAITVDGPAFHNLGA A+ EL Sbjct 181 TVSIDLAGDPLTAGLSGRPAPGLKDVVAVAKRAAGHTGVRAITVDGPAFHNLGANASWEL 240 Query 237 AATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVG 296 A++AA V YLRVLTESGL ++ ALRQISFR AADDDQFMT+AK RA R +WARVAEVVG Sbjct 241 GASIAAGVNYLRVLTESGLTIAAALRQISFRFAADDDQFMTIAKFRAARTVWARVAEVVG 300 Query 297 DPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPG 356 +P GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGAD++LV PFDVAI GGFPG Sbjct 301 EPDAGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADSLLVFPFDVAIDGGFPG 360 Query 357 TAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGF 416 TA FARRIARNTQLLLLEESHVGRVLDPA GSWFVE+LT RLA +AWQ FQAIEARGGF Sbjct 361 TATSFARRIARNTQLLLLEESHVGRVLDPAAGSWFVEDLTQRLAEQAWQHFQAIEARGGF 420 Query 417 VEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPT-SPVR-----R 470 EA DF+AGQIAE A RR DDIAHRR AITGVNE+PNL EPALP D + SP+ R Sbjct 421 AEARDFIAGQIAEIAGRRRDDIAHRRTAITGVNEFPNLAEPALPHSDSSYSPLAAGKLIR 480 Query 471 YAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTV 530 YA FEALRDRSD +LARTG+RP+VLLLPLGPLAE+NIR TFA+NLLASGGIEA++PGTV Sbjct 481 YATDFEALRDRSDAYLARTGSRPQVLLLPLGPLAENNIRATFASNLLASGGIEAVNPGTV 540 Query 531 DAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAH 590 DA + AV +AGSP+VAVICGTD RY+DE + +VQAAR AGVSRVYLAGPEKA+ DA H Sbjct 541 DAAGIAKAVKEAGSPAVAVICGTDKRYQDEASGVVQAARGAGVSRVYLAGPEKAVADAEH 600 Query 591 RPDEFLTAKINVVQALSNLLTRLGA 615 RPD+FLTAKIN V+ALS+LLTRLGA Sbjct 601 RPDQFLTAKINAVEALSDLLTRLGA 625 >gi|118617165|ref|YP_905497.1| methylmalonyl-CoA mutase small subunit, MutA [Mycobacterium ulcerans Agy99] gi|118569275|gb|ABL04026.1| methylmalonyl-CoA mutase small subunit, MutA [Mycobacterium ulcerans Agy99] Length=625 Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/625 (76%), Positives = 528/625 (85%), Gaps = 10/625 (1%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVPE A+LEQVR RWR+AVAGVLSK+ R DSA GD PERLL+T T DG AIRALY+ Sbjct 1 MSIDVPELAELEQVRQRWRSAVAGVLSKTVRPDSAGFGDQPERLLNTPTYDGIAIRALYS 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPA-NGATADTNAAVLAALGEGVSA 119 AFDELPEPPLPG+WP+VRGGD LRDV+SGWKV EA P + + D N A+L LG+GVSA Sbjct 61 AFDELPEPPLPGEWPYVRGGDALRDVNSGWKVVEAVPQPDASVVDANQALLGMLGDGVSA 120 Query 120 LLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLS 179 LL+RVG+ GVAPD+L LL+GVYLNLAPVI+DAGA YR A + ML L A LD QR T+S Sbjct 121 LLVRVGDHGVAPDQLEGLLAGVYLNLAPVIVDAGAQYRAASEAMLRLAAGLDTDQRATMS 180 Query 180 IDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAAT 239 IDLGADPLTA+L RPAP I++V+A+A R AG+RG+R ITVDGPAFHNLGATAA ELAAT Sbjct 181 IDLGADPLTATLSGRPAPSIDDVLAIAGRVAGDRGVRTITVDGPAFHNLGATAAWELAAT 240 Query 240 VAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPG 299 + AAVAYLR+LTESGL + DAL QI FRLAADDDQFMTLAKMRA R+LWARVAEV GDP Sbjct 241 IGAAVAYLRLLTESGLSIGDALAQIGFRLAADDDQFMTLAKMRAARRLWARVAEVAGDPD 300 Query 300 GGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAA 359 GGAA +HAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAI GGFPGTA Sbjct 301 GGAATLHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIAGGFPGTAT 360 Query 360 GFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEA 419 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVE+LT+ LA+ AWQ FQAIEARGGF A Sbjct 361 SFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEDLTEELAQHAWQHFQAIEARGGFANA 420 Query 420 HDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALP-PGDPTSP-----VRRYAA 473 HD++AGQIAE AARRADDIAHRR+AITGVNE+PNL E ALP P SP + RY A Sbjct 421 HDYVAGQIAELAARRADDIAHRRIAITGVNEFPNLDESALPQPDRGFSPDGCGKLLRYGA 480 Query 474 GFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAG 533 FE LRDRSD +L+ TGAR RVLLLPLGPLAEHN+R TFA+NLLASGG+EA++PGTVDA Sbjct 481 EFETLRDRSDAYLSDTGARQRVLLLPLGPLAEHNMRATFASNLLASGGVEALNPGTVDAQ 540 Query 534 TVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALG---DAAH 590 V AVA+AGSP+VAVICGTD RYRDE +V+AAR+AG+SRVYLAGP AL D A Sbjct 541 GVATAVAEAGSPTVAVICGTDRRYRDEAPAVVEAARSAGISRVYLAGPPGALDEAVDVAS 600 Query 591 RPDEFLTAKINVVQALSNLLTRLGA 615 RPDEFLTAKIN VQALS+LLTRLGA Sbjct 601 RPDEFLTAKINAVQALSDLLTRLGA 625 >gi|336458053|gb|EGO37040.1| methylmalonyl-CoA mutase, heterodimeric type, beta chain [Mycobacterium avium subsp. paratuberculosis S397] Length=625 Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/625 (75%), Positives = 523/625 (84%), Gaps = 10/625 (1%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVPE ADLEQVRGRWR+AVAGVL+KS R D QLGD PERLL+T T DG AIRALYT Sbjct 1 MSIDVPELADLEQVRGRWRSAVAGVLAKSTRKDPEQLGDAPERLLETPTYDGIAIRALYT 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANG----ATADTNAAVLAALGEG 116 A DELPEPPLPG+WPFVRGGD LRDV SGWKVAEAFPA A D N+AVL ALG G Sbjct 61 ALDELPEPPLPGEWPFVRGGDALRDVRSGWKVAEAFPATPVPGVAAKDINSAVLEALGNG 120 Query 117 VSALLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRD 176 A+L+R+GESGVAPD++ L GVYL++AP+IL+AGADY A D +L L +++P QR Sbjct 121 AGAVLLRIGESGVAPDQVADSLQGVYLSMAPLILEAGADYPGASDAVLGLANEIEPDQRA 180 Query 177 TLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATEL 236 T+SIDL DPLTA L RPAP +++VVAVA RAAG G+RAITVDGPAFHNLGA A+ EL Sbjct 181 TVSIDLAGDPLTAGLSGRPAPGLKDVVAVAKRAAGHTGVRAITVDGPAFHNLGANASWEL 240 Query 237 AATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVG 296 A++AA V YLRVLTESGL ++ ALRQISFR AADDDQFMT+AK RA R +WARVAEVVG Sbjct 241 GASIAAGVNYLRVLTESGLTIAAALRQISFRFAADDDQFMTIAKFRAARTVWARVAEVVG 300 Query 297 DPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPG 356 +P GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGAD++LV PFDVAI GGFPG Sbjct 301 EPDAGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADSLLVFPFDVAIDGGFPG 360 Query 357 TAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGF 416 TA FARRIARNTQLLLLEESHVGRVLDPA GSWFVE+LT RLA +AWQ FQAIEARGGF Sbjct 361 TATSFARRIARNTQLLLLEESHVGRVLDPAAGSWFVEDLTQRLAEQAWQHFQAIEARGGF 420 Query 417 VEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPT-SPVR-----R 470 EA DF+AGQIAE A RR DDIAHRR AITGVNE+PNL EPALP D + SP+ R Sbjct 421 AEARDFIAGQIAEIAGRRRDDIAHRRTAITGVNEFPNLAEPALPHSDSSYSPLAAGKLIR 480 Query 471 YAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTV 530 YA FEALRD SD +LARTG+RP+VLLLPLGPLAE+NIR TFA+NLLASGGIEA++PGTV Sbjct 481 YATDFEALRDCSDAYLARTGSRPQVLLLPLGPLAENNIRATFASNLLASGGIEAVNPGTV 540 Query 531 DAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAH 590 DA + AV +AGSP+VAVICGTD RY+DE + +VQAAR AGVSRVYLAGPEKA+ DA H Sbjct 541 DAAGIAKAVKEAGSPAVAVICGTDKRYQDEASGVVQAARGAGVSRVYLAGPEKAVADAEH 600 Query 591 RPDEFLTAKINVVQALSNLLTRLGA 615 RPD+FLTAKIN V+ALS+LLTRLGA Sbjct 601 RPDQFLTAKINAVEALSDLLTRLGA 625 >gi|240167874|ref|ZP_04746533.1| methylmalonyl-CoA mutase small subunit, MutA [Mycobacterium kansasii ATCC 12478] Length=628 Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust. Identities = 484/628 (78%), Positives = 533/628 (85%), Gaps = 13/628 (2%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVP A LEQVR RWR AVAGVLS + R D A+LGDHPE+LL+T T DGFAI ALYT Sbjct 1 MSIDVPGLAGLEQVRERWRAAVAGVLSGTTRRDPAELGDHPEQLLETATYDGFAIGALYT 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGA--TADTNAAVLAALGEGVS 118 AFDELPEP LPGQWP+VRGGD LRDV+SGWKVAEAFP A T D NA++LAALGEGVS Sbjct 61 AFDELPEPSLPGQWPYVRGGDALRDVNSGWKVAEAFPDAHAQETEDVNASLLAALGEGVS 120 Query 119 ALLIRVGE---SGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQR 175 A+LIRVG+ GVAPD+L L +GVYLNLAPVILDAGADY CD MLALVA+L+P QR Sbjct 121 AVLIRVGQVGRGGVAPDQLERLFAGVYLNLAPVILDAGADYPETCDAMLALVAKLEPDQR 180 Query 176 DTLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATE 235 T+SI+LG DPLTAS DR AP +EE+VAVA+R AG+RG+RAITVDGPAFHNLGATAA E Sbjct 181 ATVSIELGGDPLTASFSDRSAPTVEEIVAVAARVAGDRGVRAITVDGPAFHNLGATAAWE 240 Query 236 LAATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVV 295 LA TVAA VAYLR+LTESG+ V +ALRQIS RLAADDDQFMTLAKMRA RQLWARVAEV Sbjct 241 LAGTVAAGVAYLRLLTESGIPVGEALRQISLRLAADDDQFMTLAKMRAARQLWARVAEVA 300 Query 296 GDPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFP 355 GDP GGA VHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFP Sbjct 301 GDPDGGAVTVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFP 360 Query 356 GTAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGG 415 GT FARRIARNTQLLLLEESHVGRVLDPAGGSWFVE+LT++LA+ AW+ FQAIEA GG Sbjct 361 GTPNSFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEDLTEQLAQEAWRHFQAIEAHGG 420 Query 416 FVEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGD-PTS--PVRRYA 472 FV AHD+LAG+IAE AARR DDIAHRRLAITGVNE+PNL EP LP GD P + + RYA Sbjct 421 FVAAHDYLAGRIAEVAARRTDDIAHRRLAITGVNEFPNLDEPPLPQGDLPCTGGNLVRYA 480 Query 473 AGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDA 532 AGFEALRDRSD LART +RP+VLLLPLGPLAEHN RTTFA NLLASGGIE ++PGTVDA Sbjct 481 AGFEALRDRSDSFLARTRSRPQVLLLPLGPLAEHNTRTTFAANLLASGGIETLNPGTVDA 540 Query 533 GTVGNA----VADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGD- 587 V N VA+ GSP+VAVICGTD RYRDE A++ +AAR+AG+ VYLAGP ALGD Sbjct 541 AGVANVVATMVAETGSPTVAVICGTDKRYRDEAAEVARAARSAGIGSVYLAGPRAALGDS 600 Query 588 AAHRPDEFLTAKINVVQALSNLLTRLGA 615 AAH PD+FLT KIN ++ALSNLLTRLGA Sbjct 601 AAHGPDDFLTTKINALEALSNLLTRLGA 628 >gi|118466038|ref|YP_882460.1| methylmalonyl-CoA mutase, small subunit [Mycobacterium avium 104] gi|254775725|ref|ZP_05217241.1| methylmalonyl-CoA mutase, small subunit [Mycobacterium avium subsp. avium ATCC 25291] gi|118167325|gb|ABK68222.1| methylmalonyl-CoA mutase, small subunit [Mycobacterium avium 104] Length=625 Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/625 (76%), Positives = 525/625 (84%), Gaps = 10/625 (1%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVPE ADLEQVRGRWR+AVAGVL+KS R D QLGD PERLL+T T DG AIRALYT Sbjct 1 MSIDVPELADLEQVRGRWRSAVAGVLAKSTRKDPEQLGDAPERLLETPTYDGIAIRALYT 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANG----ATADTNAAVLAALGEG 116 A DELPEPPLPG+WPFVRGGD LRDV SGWKVAEAFPA A D N+AVL ALG G Sbjct 61 ALDELPEPPLPGEWPFVRGGDALRDVRSGWKVAEAFPATPVPGVAAKDINSAVLDALGNG 120 Query 117 VSALLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRD 176 A+L+R+GESGVAPD++ L GVYL++AP+IL+AGADY A D +L L +++P QR Sbjct 121 AGAVLLRIGESGVAPDQVADSLQGVYLSMAPLILEAGADYPGASDAVLGLADEIEPDQRA 180 Query 177 TLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATEL 236 T+SIDL DPLTA L RPAP +++VVAVA RAAG G+RAITVDGPAFHNLGA A+ EL Sbjct 181 TVSIDLAGDPLTAGLSGRPAPELKDVVAVAKRAAGHTGVRAITVDGPAFHNLGANASWEL 240 Query 237 AATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVG 296 A++AA V YLRVLTESGL ++ ALRQISFR AADDDQFMT+AK RA R +WARVAEVVG Sbjct 241 GASIAAGVNYLRVLTESGLTIAAALRQISFRFAADDDQFMTIAKFRAARTVWARVAEVVG 300 Query 297 DPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPG 356 +P GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGAD++LV PFDVAI GGFPG Sbjct 301 EPDAGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADSLLVFPFDVAIDGGFPG 360 Query 357 TAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGF 416 TA FARRIARNTQLLLLEESHVGRVLDPA GSWFVE+LT RLA +AWQ FQAIEARGGF Sbjct 361 TATSFARRIARNTQLLLLEESHVGRVLDPAAGSWFVEDLTQRLAEQAWQHFQAIEARGGF 420 Query 417 VEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPT-SPVR-----R 470 EA DF+AGQIAE AARR DDIAHRR AITGVNE+PNL EPALP D + SP+ R Sbjct 421 AEARDFIAGQIAEIAARRRDDIAHRRTAITGVNEFPNLAEPALPHSDSSYSPLAAGKLIR 480 Query 471 YAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTV 530 YA FEALRDRSD +LARTG+RP+ LLLPLGPLAE+NIR TFA+NLLASGGIEA++PGTV Sbjct 481 YATDFEALRDRSDAYLARTGSRPQALLLPLGPLAENNIRATFASNLLASGGIEAVNPGTV 540 Query 531 DAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAH 590 DA V AV +AGSP+VAVICGTD RY+DE +D+VQAAR AGVSRVYLAGPEKA+ DA H Sbjct 541 DAAGVAKAVKEAGSPAVAVICGTDKRYQDEASDVVQAARGAGVSRVYLAGPEKAVADAEH 600 Query 591 RPDEFLTAKINVVQALSNLLTRLGA 615 RPD+FLTAKIN V+ALS+LLTRLGA Sbjct 601 RPDQFLTAKINAVEALSDLLTRLGA 625 >gi|296170636|ref|ZP_06852212.1| methylmalonyl-CoA mutase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894727|gb|EFG74460.1| methylmalonyl-CoA mutase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=624 Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/624 (77%), Positives = 526/624 (85%), Gaps = 9/624 (1%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVPE A+LEQVRGRWR+AV GVLSKS R D +LGD PERLL+T T DG A+RALYT Sbjct 1 MSIDVPELAELEQVRGRWRSAVTGVLSKSTRKDPGELGDEPERLLETPTYDGIAVRALYT 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANG----ATADTNAAVLAALGEG 116 A DELPEPPLPG+WP+VRG D LRDV SGWKVAEAFPA+ A D N+AVL ALG G Sbjct 61 ALDELPEPPLPGEWPYVRGADALRDVKSGWKVAEAFPADRVAGVAAGDVNSAVLEALGNG 120 Query 117 VSALLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRD 176 SAL++RVGESGV +L L GV+L++ PVI+DAGADY A DVMLA +++ QR Sbjct 121 ASALVLRVGESGVTAGQLEDALQGVHLSMVPVIVDAGADYCAAADVMLAAAGRVEADQRG 180 Query 177 TLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATEL 236 LSIDLG DPLTA++ DRPAP ++EVVAVA+RAA E G+RAITVDGPAFHNLGA+A EL Sbjct 181 LLSIDLGGDPLTAAVSDRPAPALDEVVAVATRAAREHGVRAITVDGPAFHNLGASATWEL 240 Query 237 AATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVG 296 A TVAA VAYLR LTE+G+ V +ALRQISFRLAADDDQF+TLAKMRA+RQLWARVAEV+G Sbjct 241 AGTVAAGVAYLRRLTEAGMPVGEALRQISFRLAADDDQFVTLAKMRAVRQLWARVAEVLG 300 Query 297 DPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPG 356 DP GGA VHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLV PFDVAIPGGFPG Sbjct 301 DPDGGAVTVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVLPFDVAIPGGFPG 360 Query 357 TAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGF 416 TA FARRIARNTQLLLLEESHVGRVLDPAGGSWFVE+LT RLA +AW FQAIEARGGF Sbjct 361 TARSFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEDLTARLAEQAWAHFQAIEARGGF 420 Query 417 VEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP-----VRRY 471 VEA D++ QIAE AARRADDIAHRR AITGVNE+PNL EPALP D +P +RRY Sbjct 421 VEARDYVVEQIAEVAARRADDIAHRRTAITGVNEFPNLTEPALPQADSGTPLPAGNLRRY 480 Query 472 AAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVD 531 AA FEALRDRSD LARTGARP+ LLLPLGPLAEHNIR TFA NLLASGGIEA++PGTVD Sbjct 481 AAAFEALRDRSDAFLARTGARPQALLLPLGPLAEHNIRATFAANLLASGGIEAVNPGTVD 540 Query 532 AGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHR 591 A TV AVADAGSPSVAVICGTD RY +E IV+AAR AGVSRV LAGPEKA+GDA HR Sbjct 541 AATVAKAVADAGSPSVAVICGTDKRYSEEAGSIVEAARTAGVSRVCLAGPEKAVGDAEHR 600 Query 592 PDEFLTAKINVVQALSNLLTRLGA 615 PDEFLTAKI+ V+ALSNLLTRLGA Sbjct 601 PDEFLTAKIDAVEALSNLLTRLGA 624 >gi|342858788|ref|ZP_08715443.1| methylmalonyl-CoA mutase, beta subunit [Mycobacterium colombiense CECT 3035] gi|342134492|gb|EGT87672.1| methylmalonyl-CoA mutase, beta subunit [Mycobacterium colombiense CECT 3035] Length=625 Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/625 (75%), Positives = 523/625 (84%), Gaps = 10/625 (1%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 +SIDVPE DLEQVRGRWR+AVAGVL+KS R D QLGD PERLL+T T DG A+RALYT Sbjct 1 MSIDVPELDDLEQVRGRWRSAVAGVLAKSTRKDPEQLGDAPERLLETPTYDGIAVRALYT 60 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANG----ATADTNAAVLAALGEG 116 A DELPEPPLPG+WPFVRGGD LRDV SGWKVAEAFPA A D N+AVL ALG G Sbjct 61 ALDELPEPPLPGEWPFVRGGDALRDVKSGWKVAEAFPATPVPGVAAKDVNSAVLDALGNG 120 Query 117 VSALLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRD 176 AL++R+GESGVAPD+L L GVYL++AP+IL+AGADY A D +LAL ++P QR Sbjct 121 AGALVLRIGESGVAPDQLGDTLEGVYLSMAPLILEAGADYPAASDAVLALADGVEPDQRA 180 Query 177 TLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATEL 236 TLSIDLG DPL+A+L +RPAP E+VVAVA RAA G+RAITVDGPAFHNLGA A EL Sbjct 181 TLSIDLGGDPLSAALSERPAPRTEDVVAVAKRAADHTGVRAITVDGPAFHNLGANATWEL 240 Query 237 AATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVG 296 AA+VAAAV+YLRVLTESGL + ALRQISFR AADDDQFMT+AK RA R LWARVAEVVG Sbjct 241 AASVAAAVSYLRVLTESGLSIGQALRQISFRFAADDDQFMTIAKFRAARNLWARVAEVVG 300 Query 297 DPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPG 356 DP GA V+HAETSLPMMTQRDPWVNMLRCT+AAFGAGVGGAD++LV PFDVAI GGFP Sbjct 301 DPDAGATVIHAETSLPMMTQRDPWVNMLRCTVAAFGAGVGGADSLLVFPFDVAIDGGFPD 360 Query 357 TAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGF 416 A FARRIARNTQLLLLEESHVGRVLDPAGGSWFVE+LT LA RAW++FQAIE GGF Sbjct 361 VATSFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEDLTRCLAERAWEQFQAIEKHGGF 420 Query 417 VEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPT-SPVR-----R 470 +A DF+AGQIAE AARRADDIAHR+ AITGVNE+PNL EP L D T SP+ R Sbjct 421 TQARDFIAGQIAEVAARRADDIAHRKTAITGVNEFPNLTEPPLSHSDSTYSPLAAGKLVR 480 Query 471 YAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTV 530 YAA FEALRDRSD +LARTG+RP+VLLLPLGPLAE+NIR TFA+NLLASGGIEA++PGTV Sbjct 481 YAAEFEALRDRSDAYLARTGSRPQVLLLPLGPLAENNIRATFASNLLASGGIEAVNPGTV 540 Query 531 DAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAH 590 DA + +AVADAGSPS AVICGTD RY DE +D+V+AAR AG++RVYLAGP+KA+ DA H Sbjct 541 DADGIASAVADAGSPSAAVICGTDKRYADEASDVVRAARDAGIARVYLAGPDKAVADAEH 600 Query 591 RPDEFLTAKINVVQALSNLLTRLGA 615 +PD+FLTAKIN V+ALS+LLTRLGA Sbjct 601 QPDQFLTAKINAVEALSDLLTRLGA 625 >gi|15827959|ref|NP_302222.1| methylmalonyl-CoA mutase, [beta] subunit [Mycobacterium leprae TN] gi|221230436|ref|YP_002503852.1| methylmalonyl-CoA mutase, beta subunit [Mycobacterium leprae Br4923] gi|13093512|emb|CAC30753.1| methylmalonyl-CoA mutase, [beta] subunit [Mycobacterium leprae] gi|219933543|emb|CAR71895.1| methylmalonyl-CoA mutase, [beta] subunit [Mycobacterium leprae Br4923] Length=636 Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 479/636 (76%), Positives = 526/636 (83%), Gaps = 25/636 (3%) Query 3 IDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAF 62 +DVPE A+LEQ+RGRWR AVAGVLS+S R D A GD PERLLDT T DGFAIR LYT F Sbjct 3 VDVPEFAELEQIRGRWRRAVAGVLSRSMRRDPATFGDQPERLLDTATYDGFAIRPLYTVF 62 Query 63 DELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATAD--------TNAAVLAALG 114 DELPE LPG+WP+ RGGD LRDVHSGWKV E FP + ATA +NA +LAAL Sbjct 63 DELPESSLPGEWPYRRGGDALRDVHSGWKVTEVFPVDPATAGVAADEGTASNATILAALA 122 Query 115 EGVSALLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQ 174 EGVSAL IRVG+SGVAP +L +LL GVY++L PVILDAGADY ACD +LAL+A+LD + Sbjct 123 EGVSALRIRVGQSGVAPGQLDSLLLGVYVDLVPVILDAGADYVEACDAVLALLARLDSSR 182 Query 175 RDTLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAAT 234 R LSIDLGADPLTASL RPAP I++VVAVA+R AG+RG+RAITVDGPAFHNLGA+A Sbjct 183 RTMLSIDLGADPLTASLSGRPAPSIDQVVAVAARVAGDRGVRAITVDGPAFHNLGASATW 242 Query 235 ELAATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEV 294 ELAA +AAAV YLRVLTES + VS+ALRQISFRLAADDDQF+T+AK+RA+RQLWAR+AEV Sbjct 243 ELAAAIAAAVTYLRVLTESKMPVSEALRQISFRLAADDDQFLTIAKIRAVRQLWARIAEV 302 Query 295 VGDPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGF 354 GDP GGAAVVHAETSLPMMTQRDPWVNMLR TLAAFGAGVGGADTVLV PFDVAIPGGF Sbjct 303 AGDPEGGAAVVHAETSLPMMTQRDPWVNMLRGTLAAFGAGVGGADTVLVFPFDVAIPGGF 362 Query 355 PGTAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARG 414 G AA FARRIARNTQLLLLEESHVGRVLDPAGGSWFVE LT++LA++AWQ FQAIE G Sbjct 363 LGMAASFARRIARNTQLLLLEESHVGRVLDPAGGSWFVENLTEQLAQQAWQHFQAIETYG 422 Query 415 GFVEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPV------ 468 GFV+A D+LAGQI E AARR DDIAHRR AITGVNEYPNL EPAL G SPV Sbjct 423 GFVDAGDYLAGQIHETAARRTDDIAHRRTAITGVNEYPNLAEPALLHGG--SPVVATAAG 480 Query 469 --RRYAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAID 526 RYAAGFEALRDRSD +LARTGARP+VLLLPLGPLAEHNIR TFATNLLASGGI AI+ Sbjct 481 NLLRYAAGFEALRDRSDAYLARTGARPQVLLLPLGPLAEHNIRATFATNLLASGGIAAIN 540 Query 527 PGTVDAGTVGNAVAD----AGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPE 582 G+VDA V AVA AGS V VICGTD RYRDE AD+V+AAR AGVS VYLAGPE Sbjct 541 LGSVDAPGVVQAVAQAGFMAGSSMVVVICGTDLRYRDEAADVVEAARGAGVSWVYLAGPE 600 Query 583 KALGD---AAHRPDEFLTAKINVVQALSNLLTRLGA 615 KALGD A RPDE++TAKIN V+ALSNLLTRLGA Sbjct 601 KALGDINNAKSRPDEYITAKINAVEALSNLLTRLGA 636 >gi|308400509|ref|ZP_07493183.2| methylmalonyl-CoA mutase, small subunit [Mycobacterium tuberculosis SUMu012] gi|308366317|gb|EFP55168.1| methylmalonyl-CoA mutase, small subunit [Mycobacterium tuberculosis SUMu012] Length=434 Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/426 (100%), Positives = 426/426 (100%), Gaps = 0/426 (0%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT Sbjct 9 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 68 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 120 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL Sbjct 69 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 128 Query 121 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 180 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI Sbjct 129 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 188 Query 181 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 240 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV Sbjct 189 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 248 Query 241 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 300 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG Sbjct 249 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 308 Query 301 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 360 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG Sbjct 309 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 368 Query 361 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 420 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH Sbjct 369 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 428 Query 421 DFLAGQ 426 DFLAGQ Sbjct 429 DFLAGQ 434 >gi|254819568|ref|ZP_05224569.1| methylmalonyl-CoA mutase, small subunit [Mycobacterium intracellulare ATCC 13950] Length=601 Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/601 (74%), Positives = 501/601 (84%), Gaps = 10/601 (1%) Query 25 VLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPFVRGGDPLR 84 +L+KS R D QLGD PERLL+T T DG AIRALYTA DELPEPPLPG+WP+VRGGD LR Sbjct 1 MLAKSTRKDPEQLGDAPERLLETPTYDGIAIRALYTALDELPEPPLPGEWPYVRGGDALR 60 Query 85 DVHSGWKVAEAFPANG----ATADTNAAVLAALGEGVSALLIRVGESGVAPDRLTALLSG 140 DV +GW+VAEAFPA A AD N+AVL ALG G SAL++R+GESGVAP +L L G Sbjct 61 DVKTGWRVAEAFPATPVPGVAAADVNSAVLDALGNGASALVLRIGESGVAPGQLADALQG 120 Query 141 VYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDRPAPPIE 200 VYL++AP+IL+AGA Y A DV LAL ++P QR T+SIDLG DPLTA+L +R AP IE Sbjct 121 VYLSMAPLILEAGAGYAAASDVALALAEGVEPDQRATVSIDLGGDPLTAALSERAAPKIE 180 Query 201 EVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTESGLVVSDA 260 +VVAVA RAA G+RAITVDGPAFHNLGA A ELAA VAAAV+YLRVLTE+G+ + A Sbjct 181 DVVAVAKRAAEHTGVRAITVDGPAFHNLGANATWELAAGVAAAVSYLRVLTEAGMPIGQA 240 Query 261 LRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQRDPW 320 LRQISFR AADDDQFMT+AK RA R LWARVAEVVGDP GAAV+HAETSLPMMTQRDPW Sbjct 241 LRQISFRFAADDDQFMTIAKFRAARNLWARVAEVVGDPDAGAAVIHAETSLPMMTQRDPW 300 Query 321 VNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEESHVG 380 VNMLRCTLAAFGAGVGGAD++LV PFDVAI GGFPGTA FARRIARNTQLLLLEESHVG Sbjct 301 VNMLRCTLAAFGAGVGGADSLLVFPFDVAIDGGFPGTATSFARRIARNTQLLLLEESHVG 360 Query 381 RVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARRADDIAH 440 RVLDPAGGSWFVE+LT RLA +AWQ FQAIEA GGF EA DF+A QI E AARR+DDIAH Sbjct 361 RVLDPAGGSWFVEDLTARLAEQAWQHFQAIEAHGGFTEAVDFIAAQIGEIAARRSDDIAH 420 Query 441 RRLAITGVNEYPNLGEPALPPGDPT-SPVR-----RYAAGFEALRDRSDHHLARTGARPR 494 RR AITGVNE+PNL EP LP D + SP+ RYAA FEALRDRSD +ARTG+RP+ Sbjct 421 RRTAITGVNEFPNLTEPPLPQSDSSYSPLAAGKLVRYAAEFEALRDRSDAFVARTGSRPQ 480 Query 495 VLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTD 554 LLLPLGPLAE+NIR TFA+NLLASGGIEA++PGTVDA V AVA+AG+P+VAVICGTD Sbjct 481 ALLLPLGPLAENNIRATFASNLLASGGIEAVNPGTVDAAGVAAAVAEAGTPTVAVICGTD 540 Query 555 ARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLG 614 RY+DE + +VQAARAAG+ RVYLAGPEKA+ DA H+PD+FLTAKIN V+ALS+LLTRLG Sbjct 541 KRYQDEASGVVQAARAAGIDRVYLAGPEKAVADAEHQPDQFLTAKINAVEALSDLLTRLG 600 Query 615 A 615 A Sbjct 601 A 601 >gi|118467931|ref|YP_887473.1| methylmalonyl-CoA mutase, small subunit [Mycobacterium smegmatis str. MC2 155] gi|118169218|gb|ABK70114.1| methylmalonyl-CoA mutase, small subunit [Mycobacterium smegmatis str. MC2 155] Length=623 Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/615 (69%), Positives = 477/615 (78%), Gaps = 10/615 (1%) Query 11 LEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPL 70 +E+ R +WR AVAGVL+KS+R D A+LG PER LD+QT +GFA+R LYTA D L EP L Sbjct 9 IEEDRNKWRTAVAGVLAKSSRRDPAELGPEPERHLDSQTYEGFAVRPLYTALDALDEPAL 68 Query 71 PGQWPFVRGGDPLRDVHSGWKVAEAFPA----NGATADT---NAAVLAALGEGVSALLIR 123 PGQWPF+RGGD LRDV SGWKV E+FPA GA D N AVL AL EG SAL + Sbjct 69 PGQWPFIRGGDALRDVKSGWKVVESFPALGADGGADGDVKFDNGAVLLALTEGASALSVT 128 Query 124 VGESGVAPDRLTALLSGVYLNLAPVILD-AGADYRPACDVMLALVAQLDPGQRDTLSIDL 182 +GE GVAP L+ L GV+L+L PVI + G D D +LALVA D QR LSID Sbjct 129 IGEGGVAPADLSQLFEGVFLDLVPVIFENTGNDLDATADAVLALVAGFDAEQRSRLSIDF 188 Query 183 GADPLTASLRDRPAPPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVA 241 GADPLTA L R A ++ AVA + G +R ITVDGPAFHN GA+A+ ELAATVA Sbjct 189 GADPLTAPLSGRAAGTDADLAAVAKKVGEHTGHVRTITVDGPAFHNKGASASWELAATVA 248 Query 242 AAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGG 301 AAV YLR+L + GL V DALRQISFR AADDDQF T+AK+RA RQLWARVAEVVGD G Sbjct 249 AAVEYLRILVDGGLSVPDALRQISFRYAADDDQFNTIAKLRAARQLWARVAEVVGDADAG 308 Query 302 AAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGF 361 AA +HA TSLPMMTQRDPWVNMLR TLAAF AGVGGADTV V PFDVAIP GFPGT+A F Sbjct 309 AATIHAVTSLPMMTQRDPWVNMLRTTLAAFSAGVGGADTVQVLPFDVAIPNGFPGTSATF 368 Query 362 ARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHD 421 +RRIARNTQLLLLEESH+G+VLDPAGGSWFVE+LT +LA++AW FQ IEARGGFV A D Sbjct 369 SRRIARNTQLLLLEESHIGQVLDPAGGSWFVEDLTAQLAKQAWTHFQDIEARGGFVAARD 428 Query 422 FLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPT-SPVRRYAAGFEALRD 480 +A +IAE AARRADDIAHRR AITGVNE+PNL EP LP GD + + RYAAGFEALRD Sbjct 429 HVAERIAEVAARRADDIAHRRTAITGVNEFPNLSEPPLPQGDSALTSIERYAAGFEALRD 488 Query 481 RSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVA 540 RSD LA+TGARPRVLLLPLGPLAEHNIR TFA+NLLASGGIEAI+PGTVDA + AV Sbjct 489 RSDAFLAKTGARPRVLLLPLGPLAEHNIRATFASNLLASGGIEAINPGTVDASGIAAAVT 548 Query 541 DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKI 600 +AGSP+VAV+CGTDARY E + V AARAAGV V LAGPEKA+ +A +PD +LTAKI Sbjct 549 EAGSPAVAVLCGTDARYGTEASAAVAAARAAGVQNVLLAGPEKAVAEADSKPDGYLTAKI 608 Query 601 NVVQALSNLLTRLGA 615 N V+ LSNLLT LGA Sbjct 609 NAVEVLSNLLTGLGA 623 >gi|108800089|ref|YP_640286.1| methylmalonyl-CoA mutase, small subunit [Mycobacterium sp. MCS] gi|119869216|ref|YP_939168.1| methylmalonyl-CoA mutase subunit beta [Mycobacterium sp. KMS] gi|108770508|gb|ABG09230.1| methylmalonyl-CoA mutase, small subunit [Mycobacterium sp. MCS] gi|119695305|gb|ABL92378.1| methylmalonyl-CoA mutase, beta subunit [Mycobacterium sp. KMS] Length=615 Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/601 (71%), Positives = 484/601 (81%), Gaps = 2/601 (0%) Query 17 RWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPF 76 +WR+AVAGVL+KS R D A L P+RLLD+ T +GFAIR LYT+ DELPEPPLPGQWP+ Sbjct 15 QWRSAVAGVLAKSTRKDPADLPAEPDRLLDSPTYEGFAIRPLYTSLDELPEPPLPGQWPY 74 Query 77 VRGGDPLRDVHSGWKVAEAFPANGATAD-TNAAVLAALGEGVSALLIRVGESGVAPDRLT 135 VRGGD LRDV SGWKVAE FPA ++AD N A+L L EGVSAL++RVG GVAP L Sbjct 75 VRGGDALRDVKSGWKVAETFPAVPSSADEANGAILLGLTEGVSALVLRVGADGVAPSDLG 134 Query 136 ALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDRP 195 LL V+L+L PV LDAG +Y A +L L+ LD QR+ LS+DLGADPLTA DRP Sbjct 135 RLLESVFLDLVPVQLDAGTEYAAAAAALLPLLTDLDAEQRERLSVDLGADPLTAPFSDRP 194 Query 196 APPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTESG 254 AP + +VV++A+ G G +RAITVDGPA HN GA+A+ ELA VAA V+YLR+L + G Sbjct 195 APEVADVVSIAAGVTGHGGHVRAITVDGPALHNRGASASWELAGAVAAGVSYLRLLDQGG 254 Query 255 LVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMM 314 L + DA+RQISFR AADDDQFMT+AK+RA R LWARV EVVG GAA VHA +SLPMM Sbjct 255 LDIVDAVRQISFRFAADDDQFMTIAKLRAARLLWARVCEVVGAADAGAATVHAVSSLPMM 314 Query 315 TQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLL 374 QRDPWVNMLR TLAAF AGVGGADTVLVHPFDVAIP GFPGT++ FARRIARNTQLLLL Sbjct 315 AQRDPWVNMLRTTLAAFSAGVGGADTVLVHPFDVAIPNGFPGTSSTFARRIARNTQLLLL 374 Query 375 EESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARR 434 EESH+GRVLDPAGGSWFVE+LT +LA RAW+ FQ IE+RGGFV AHD +A QIA+ AARR Sbjct 375 EESHIGRVLDPAGGSWFVEDLTAQLAERAWKHFQDIESRGGFVAAHDHIAEQIADVAARR 434 Query 435 ADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPR 494 ADDIAHRR A+TGVNEYPNL EPALPPG+ + V RYAAGFEALRDRSD L TGARP+ Sbjct 435 ADDIAHRRTALTGVNEYPNLDEPALPPGEAFTAVARYAAGFEALRDRSDAVLESTGARPK 494 Query 495 VLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTD 554 VLLLPLGPLAEHNIR TFATNLLASGGIEA++PG+V A V AV+ AG+PSVAVICGTD Sbjct 495 VLLLPLGPLAEHNIRATFATNLLASGGIEAVNPGSVGAADVARAVSAAGNPSVAVICGTD 554 Query 555 ARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLG 614 RY + A +V AAR AGV+RVYLAGPEKA+ +A +PD++LTAKI+ V ALSNLLTRLG Sbjct 555 TRYGTDAAAVVAAAREAGVTRVYLAGPEKAVAEADPKPDDYLTAKIDAVAALSNLLTRLG 614 Query 615 A 615 A Sbjct 615 A 615 >gi|126435713|ref|YP_001071404.1| methylmalonyl-CoA mutase subunit beta [Mycobacterium sp. JLS] gi|126235513|gb|ABN98913.1| methylmalonyl-CoA mutase, beta subunit [Mycobacterium sp. JLS] Length=615 Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/601 (70%), Positives = 482/601 (81%), Gaps = 2/601 (0%) Query 17 RWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPF 76 +WR+AVAGVL+KS R D A L P+RLLD+ T +GFAIR LYT+ DELPEPPLPGQWP+ Sbjct 15 QWRSAVAGVLAKSTRKDPADLPAEPDRLLDSPTYEGFAIRPLYTSLDELPEPPLPGQWPY 74 Query 77 VRGGDPLRDVHSGWKVAEAFPANGATAD-TNAAVLAALGEGVSALLIRVGESGVAPDRLT 135 VRGGD LRDV SGWKVAE FPA ++AD N A+L L EGVSAL++RVG GVAP L Sbjct 75 VRGGDALRDVKSGWKVAETFPAVPSSADEANGAILLGLTEGVSALVLRVGADGVAPSDLG 134 Query 136 ALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDRP 195 LL V+L+L PV LDAG +Y A +L L+ LD QR+ LS+DLGADPLTA DRP Sbjct 135 RLLESVFLDLVPVQLDAGTEYAAAAAALLPLLTDLDAEQRERLSVDLGADPLTAPFSDRP 194 Query 196 APPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTESG 254 AP + +VV++A+ G G +RAITVDGPA HN GA+A+ ELA VAA V+YLR+L + G Sbjct 195 APEVADVVSIAAGVTGHGGHVRAITVDGPALHNRGASASWELAGAVAAGVSYLRLLDQGG 254 Query 255 LVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMM 314 L + DA+RQISFR AADDDQFMT+AK+RA R LWARV EVVG GAA VHA +SLPMM Sbjct 255 LDIVDAVRQISFRFAADDDQFMTIAKLRAARLLWARVCEVVGAADAGAATVHAVSSLPMM 314 Query 315 TQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLL 374 +RDPWVNMLR TLAAF AGVGGADTVLVHPFDVAIP GFPGT++ FARRIARNTQLLLL Sbjct 315 ARRDPWVNMLRTTLAAFSAGVGGADTVLVHPFDVAIPNGFPGTSSTFARRIARNTQLLLL 374 Query 375 EESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARR 434 EESH+GRVLDPAGGSWFVE+LT +LA +AW+ FQ IE+RGGFV AHD +A QIA+ AARR Sbjct 375 EESHIGRVLDPAGGSWFVEDLTAQLAEQAWKHFQDIESRGGFVAAHDHIAEQIADVAARR 434 Query 435 ADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPR 494 ADDIAHRR A+TGVNEYPNL EPALPPG+ + V RYAAGFEALRDRSD L TG RP+ Sbjct 435 ADDIAHRRTALTGVNEYPNLEEPALPPGEAFTAVARYAAGFEALRDRSDAVLESTGTRPK 494 Query 495 VLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTD 554 VLLLPLGPLAEHNIR TFATNLLASGGIEA++PG+V A V AV+ AG+PSVAVICGTD Sbjct 495 VLLLPLGPLAEHNIRATFATNLLASGGIEAVNPGSVGAADVARAVSAAGNPSVAVICGTD 554 Query 555 ARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLG 614 RY + A +V AAR AGV+RVYLAGPEKAL +A +PD++LTAKI+ V LSNLLTRLG Sbjct 555 TRYGTDAAAVVAAAREAGVTRVYLAGPEKALAEADPKPDDYLTAKIDAVAVLSNLLTRLG 614 Query 615 A 615 A Sbjct 615 A 615 >gi|167969301|ref|ZP_02551578.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis H37Ra] Length=376 Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/376 (100%), Positives = 376/376 (100%), Gaps = 0/376 (0%) Query 240 VAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPG 299 VAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPG Sbjct 1 VAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPG 60 Query 300 GGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAA 359 GGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAA Sbjct 61 GGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAA 120 Query 360 GFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEA 419 GFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEA Sbjct 121 GFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEA 180 Query 420 HDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALR 479 HDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALR Sbjct 181 HDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALR 240 Query 480 DRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAV 539 DRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAV Sbjct 241 DRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAV 300 Query 540 ADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAK 599 ADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAK Sbjct 301 ADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAK 360 Query 600 INVVQALSNLLTRLGA 615 INVVQALSNLLTRLGA Sbjct 361 INVVQALSNLLTRLGA 376 >gi|120403746|ref|YP_953575.1| methylmalonyl-CoA mutase subunit beta [Mycobacterium vanbaalenii PYR-1] gi|119956564|gb|ABM13569.1| methylmalonyl-CoA mutase, beta subunit [Mycobacterium vanbaalenii PYR-1] Length=626 Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/606 (68%), Positives = 480/606 (80%), Gaps = 7/606 (1%) Query 17 RWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPF 76 RWR+AVAGVL+KS + D A L PERLLD+ T DGF IR LYT DEL EP LPG+WPF Sbjct 21 RWRSAVAGVLAKSLKRDPADLPSEPERLLDSATYDGFPIRPLYTGADELAEPALPGRWPF 80 Query 77 VRGGDPLRDVHSGWKVAEAFPAN-GATADTNAAVLAALGEGVSALLIRVGESG--VAPDR 133 VRGGD LRDV SGWKVAEAFPA G+ A+ N A+L L EGVSAL++RVG+ VAP Sbjct 81 VRGGDALRDVKSGWKVAEAFPAEAGSVAEANGAILVGLTEGVSALVLRVGDEAGAVAPGD 140 Query 134 LTALLSGVYLNLAPVILDAGAD---YRPACDVMLALVAQLDPGQRDTLSIDLGADPLTAS 190 L LL GVYL+L PV++D D +R A D +LA++ LD QR LSIDLGADPLTA+ Sbjct 141 LGRLLDGVYLDLVPVVVDTAGDGSAHRAAADALLAMLTGLDGDQRSRLSIDLGADPLTAA 200 Query 191 LRDRPAPPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVAAAVAYLRV 249 + RPAP +VVA A A G +R ITVDGP FHNLGA+A+ EL A VAA VAYLR+ Sbjct 201 MAGRPAPEFADVVATAEDAVAYDGHVRTITVDGPTFHNLGASASWELGAAVAAGVAYLRL 260 Query 250 LTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAET 309 LT++GL +DALRQISFR AADDDQF T+AK+RA R+LWARVAEVVG+P GAA +HA T Sbjct 261 LTDAGLSTADALRQISFRFAADDDQFTTIAKLRAARRLWARVAEVVGEPAAGAATLHATT 320 Query 310 SLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNT 369 SLPMMT RDPWVNMLR T+AAF AGVGGADT+LVHPFDVAI GGFPGTA FARRIARNT Sbjct 321 SLPMMTARDPWVNMLRTTVAAFAAGVGGADTLLVHPFDVAIDGGFPGTARSFARRIARNT 380 Query 370 QLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAE 429 QLLLLEESH+GRVLDP+GGSWF+E+LT +LA +AWQ+FQ IEA GGFV A + ++ IAE Sbjct 381 QLLLLEESHLGRVLDPSGGSWFIEDLTGQLAGQAWQKFQEIEAHGGFVAAREHISAGIAE 440 Query 430 CAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLART 489 AARRADD+AHRR ++TGVNE+PNLGE LP GDP VRRYAA FEALR+RSD +L +T Sbjct 441 VAARRADDVAHRRTSVTGVNEFPNLGEVPLPQGDPLPQVRRYAAAFEALRNRSDVYLEKT 500 Query 490 GARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAV 549 GARP+ LLLPLGPLAEHNIRTTF NLLASGGIEA++PG +D V AVA++G+ +AV Sbjct 501 GARPKTLLLPLGPLAEHNIRTTFTANLLASGGIEAVNPGPLDVAGVAAAVAESGATEIAV 560 Query 550 ICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNL 609 ICGTDARY DEV+ +V+AARAAGV + LAGPEKA+ +A +PD +LTAKI+ V ALS+L Sbjct 561 ICGTDARYADEVSGVVEAARAAGVRHILLAGPEKAVAEADSKPDGYLTAKIDAVSALSDL 620 Query 610 LTRLGA 615 LTRLGA Sbjct 621 LTRLGA 626 >gi|289745244|ref|ZP_06504622.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis 02_1987] gi|289685772|gb|EFD53260.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis 02_1987] Length=360 Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/358 (100%), Positives = 358/358 (100%), Gaps = 0/358 (0%) Query 258 SDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQR 317 SDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQR Sbjct 3 SDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQR 62 Query 318 DPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEES 377 DPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEES Sbjct 63 DPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEES 122 Query 378 HVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARRADD 437 HVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARRADD Sbjct 123 HVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARRADD 182 Query 438 IAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPRVLL 497 IAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPRVLL Sbjct 183 IAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPRVLL 242 Query 498 LPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTDARY 557 LPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTDARY Sbjct 243 LPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTDARY 302 Query 558 RDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLGA 615 RDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLGA Sbjct 303 RDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLGA 360 >gi|333990862|ref|YP_004523476.1| methylmalonyl-CoA mutase small subunit MutA [Mycobacterium sp. JDM601] gi|333486830|gb|AEF36222.1| methylmalonyl-CoA mutase small subunit MutA [Mycobacterium sp. JDM601] Length=636 Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/636 (69%), Positives = 499/636 (79%), Gaps = 21/636 (3%) Query 1 VSIDVP-ERADLEQVRGRWRNAVAGVLSKSNRTDSAQL----GDHPERLLDTQTA--DGF 53 +SIDV E A +E+ R RWR AVAGVL+KS+R + A + G PERLLDT A DGF Sbjct 1 MSIDVSAEPAGMEEARARWRAAVAGVLAKSSRREPADIDSETGGEPERLLDTPVAGPDGF 60 Query 54 AIRALYTAFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGAT--ADTNAAVLA 111 AIRALYT FD LPE PLPG+WP+VRG D LRDV+SGWKVAE FP NG AD N VL Sbjct 61 AIRALYTGFDALPEQPLPGRWPYVRGADALRDVNSGWKVAERFPGNGPATGADVNGVVLG 120 Query 112 ALGEGVSALLIRVGESGVAPDRLTALLSGVYLNLAPVILD-AGA-DYRPACDVMLALVAQ 169 AL EGVSAL++RVG+ GV D L + VYL L PV+LD AGA DY A D MLALV Sbjct 121 ALTEGVSALVVRVGDGGVPADELRRVFDDVYLQLVPVLLDGAGAGDYTAAADTMLALVDG 180 Query 170 LDPGQRDTLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLG 229 LDP R LS+DLGADPL A+L PAP I+EVVAVA+R AG RG+RAI V+GPA HNLG Sbjct 181 LDPDNRANLSLDLGADPLIAALTGVPAPAIDEVVAVAARTAGNRGVRAIAVNGPAVHNLG 240 Query 230 ATAATELAATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWA 289 A AA ELAA +AAAVAYLR LT++GL ++DA+ QI FRLAADDDQFMT+AK+RA RQLWA Sbjct 241 AGAAGELAAGLAAAVAYLRALTDAGLPIADAIGQIGFRLAADDDQFMTIAKIRAARQLWA 300 Query 290 RVAEVVGDPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVA 349 RVAEV G P GAAVVHAETSL MMTQRDPWVNMLR TLAAFGAGVGGADTVLV PFD A Sbjct 301 RVAEVAGAPEAGAAVVHAETSLAMMTQRDPWVNMLRTTLAAFGAGVGGADTVLVWPFDSA 360 Query 350 IPGGFPGTAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQA 409 I GG PG +A F+RRIARNTQLLLLEESH+G+VLDPAGGSWFVE+LT++LA++AW++FQ Sbjct 361 INGGQPGASAAFSRRIARNTQLLLLEESHLGQVLDPAGGSWFVEDLTEQLAQQAWRQFQE 420 Query 410 IEARGGFVEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPG--DPTSP 467 IEA GGF A + +A +IA AA RA+DIAHRR AITGVNEYPNL EP LPP + T P Sbjct 421 IEALGGFEAAREHIAERIAGVAAARAEDIAHRRNAITGVNEYPNLAEPPLPPSATEATQP 480 Query 468 -VRRYAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAID 526 +RRYAA FEALRDRSD +LARTGARP+VLLLPLGP+AEHN+RTTFA NLLASGGI+ ++ Sbjct 481 GLRRYAAQFEALRDRSDAYLARTGARPQVLLLPLGPMAEHNVRTTFAANLLASGGIDVVN 540 Query 527 PGTVDAGTVGNAVA----DAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPE 582 PGTVDA + AV AGSP+VAV+CG+DARY E A I+ AAR+AG+ RVYLAGP Sbjct 541 PGTVDADGLAAAVERAGLPAGSPTVAVVCGSDARYGAEAAGIIAAARSAGIERVYLAGPA 600 Query 583 KAL---GDAAHRPDEFLTAKINVVQALSNLLTRLGA 615 KAL D +PD++LT KI+ VQALS+LLTRLGA Sbjct 601 KALAANADTDPKPDDYLTMKIDAVQALSDLLTRLGA 636 >gi|145224234|ref|YP_001134912.1| methylmalonyl-CoA mutase subunit beta [Mycobacterium gilvum PYR-GCK] gi|145216720|gb|ABP46124.1| methylmalonyl-CoA mutase, beta subunit [Mycobacterium gilvum PYR-GCK] Length=620 Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/602 (66%), Positives = 459/602 (77%), Gaps = 3/602 (0%) Query 17 RWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPF 76 RWR+AVA VL+K+ + DSA LG PERLLD+ T DGF IR LYT+ D++ E LPG WPF Sbjct 19 RWRSAVAAVLAKTTKKDSADLGPEPERLLDSDTYDGFPIRPLYTSRDDVGEAALPGSWPF 78 Query 77 VRGGDPLRDVHSGWKVAEAFPANGATAD-TNAAVLAALGEGVSALLIRVGESGVAPDRLT 135 VRGGD LRDV +GWKVA+ +P +GA D N ++L L EG+SAL++R G VAP L Sbjct 79 VRGGDALRDVKAGWKVADVYPVDGAATDEANGSILLGLTEGISALVLRTGADAVAPTELD 138 Query 136 ALLSGVYLNLAPVILDA-GADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDR 194 LL GVYL+L P++L+A G Y P+ +L L+ D QR +SIDLGADPL A L R Sbjct 139 RLLDGVYLDLVPIVLEADGPAYGPSTSALLGLLTDFDEDQRSRISIDLGADPLGAPLAGR 198 Query 195 PAPPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTES 253 PAP +EEVV A G +RAITVDGP FHNLGA A+ EL A VAA VAYLR L ++ Sbjct 199 PAPCLEEVVGTAKTLLDHDGHVRAITVDGPTFHNLGANASWELGAAVAAGVAYLRHLVDA 258 Query 254 GLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPM 313 GL + ALRQISFR A DDDQF ++AK+RA RQLWAR+AEVVG+P GAA VHA TSLPM Sbjct 259 GLPTAAALRQISFRFAVDDDQFSSIAKLRAARQLWARIAEVVGEPDAGAATVHATTSLPM 318 Query 314 MTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLL 373 MT+RDPWVNMLR T+AAF AGVGGAD V VHPFDVAI GGFPGTA FARRIARNTQLLL Sbjct 319 MTRRDPWVNMLRTTVAAFAAGVGGADIVSVHPFDVAIDGGFPGTARSFARRIARNTQLLL 378 Query 374 LEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAAR 433 LEESH+GRVLDPAGGSWFVE+LT LA +AW FQ IEA+GGF A + +A QIAE A R Sbjct 379 LEESHIGRVLDPAGGSWFVEDLTRELAGQAWGHFQEIEAKGGFEAAREHIAAQIAEVAQR 438 Query 434 RADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARP 493 RA DIAHRR A+TGVNE+PNL E LP GDP V RYA+ FEALRDRSD L R GARP Sbjct 439 RAADIAHRRTALTGVNEFPNLSEVPLPQGDPLPGVVRYASDFEALRDRSDVFLERNGARP 498 Query 494 RVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGT 553 + LLLPLGPLAEHNIRTTFA+NLLASGGIEA++PG +DA V AV++AG +AVICGT Sbjct 499 KALLLPLGPLAEHNIRTTFASNLLASGGIEAVNPGPLDASGVAAAVSEAGVAEIAVICGT 558 Query 554 DARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRL 613 D RY DEV+ +V+AARAAGV V LAGPEK++ A +PD LTAKI+ V+ALS+LLTRL Sbjct 559 DKRYADEVSAVVEAARAAGVRHVLLAGPEKSVPAAESKPDGHLTAKIDAVEALSDLLTRL 618 Query 614 GA 615 GA Sbjct 619 GA 620 >gi|315444569|ref|YP_004077448.1| methylmalonyl-CoA mutase, heterodimeric type, beta chain [Mycobacterium sp. Spyr1] gi|315262872|gb|ADT99613.1| methylmalonyl-CoA mutase, heterodimeric type, beta chain [Mycobacterium sp. Spyr1] Length=609 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/602 (66%), Positives = 457/602 (76%), Gaps = 3/602 (0%) Query 17 RWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPF 76 RWR+AVA VL+K+ + D A LG PERLLD+ T DGF IR LYT+ D++ E LPG WPF Sbjct 8 RWRSAVAAVLAKTTKKDPADLGPEPERLLDSDTYDGFPIRPLYTSRDDVGEAALPGSWPF 67 Query 77 VRGGDPLRDVHSGWKVAEAFPANGATAD-TNAAVLAALGEGVSALLIRVGESGVAPDRLT 135 VRGGD LRDV +GWKVA+ + A+GA D N ++L L EG+SAL++R G VAP L Sbjct 68 VRGGDALRDVKAGWKVADVYRADGAATDEANGSILLGLTEGISALVLRTGADAVAPTELD 127 Query 136 ALLSGVYLNLAPVILDA-GADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDR 194 LL GVYL+L P++L+A G Y PA +L L+ D QR +SIDLGADPL A L R Sbjct 128 RLLDGVYLDLVPIVLEADGPAYGPATSALLGLLTDFDEDQRSRISIDLGADPLGAPLAGR 187 Query 195 PAPPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTES 253 PAP +EEVV A G +RAITVDGP FHNLGA A+ EL A VAA VAYLR L ++ Sbjct 188 PAPCLEEVVGTAKTLLDHDGHVRAITVDGPTFHNLGANASWELGAAVAAGVAYLRHLVDA 247 Query 254 GLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPM 313 GL + ALRQISFR A DDDQF ++AK+RA RQLWAR+AEVVG+P GAA VHA TSLPM Sbjct 248 GLPTAAALRQISFRFAVDDDQFSSIAKLRAARQLWARIAEVVGEPDAGAATVHATTSLPM 307 Query 314 MTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLL 373 MT+RDPWVNMLR T+AAF AGVGGAD V VHPFDVAI GGFPGTA FARRIARNTQLLL Sbjct 308 MTRRDPWVNMLRTTVAAFAAGVGGADIVSVHPFDVAIDGGFPGTARSFARRIARNTQLLL 367 Query 374 LEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAAR 433 LEESH+GRVLDPAGGSWFVE+LT LA +AW FQ IEA GGF A + +A QIAE A R Sbjct 368 LEESHIGRVLDPAGGSWFVEDLTRELAGQAWGHFQEIEANGGFEAAREHIAAQIAEVAQR 427 Query 434 RADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARP 493 RA DIAHRR A+TGVNE+PNL E LP GDP V RYA+ FEALRDRSD L R GARP Sbjct 428 RAADIAHRRTALTGVNEFPNLSEVPLPQGDPLPGVVRYASDFEALRDRSDVFLERNGARP 487 Query 494 RVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGT 553 + LLLPLGPLAEHNIRTTFA+NLLASGGIEA++PG +DA V AV+D G+ VAVICGT Sbjct 488 KALLLPLGPLAEHNIRTTFASNLLASGGIEAVNPGPLDATGVAAAVSDEGAAEVAVICGT 547 Query 554 DARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRL 613 D RY DEV+++V AARAAGV + LAGPEKA+ A +PD LTAKI+ V+ALS+LLTRL Sbjct 548 DKRYADEVSEVVDAARAAGVKYILLAGPEKAVAAAVSKPDGHLTAKIDAVEALSDLLTRL 607 Query 614 GA 615 GA Sbjct 608 GA 609 >gi|169629796|ref|YP_001703445.1| methylmalonyl-CoA mutase small subunit MutA [Mycobacterium abscessus ATCC 19977] gi|169241763|emb|CAM62791.1| Probable methylmalonyl-CoA mutase small subunit MutA [Mycobacterium abscessus] Length=607 Score = 574 bits (1480), Expect = 1e-161, Method: Compositional matrix adjust. Identities = 369/620 (60%), Positives = 442/620 (72%), Gaps = 18/620 (2%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 ++++VPE +++ RW+ VAGVL+KS R L PERLLD+ T DG AIR LYT Sbjct 1 MTVEVPE---IQRDFARWQKGVAGVLAKSTRKAVEDLPADPERLLDSPTYDGIAIRPLYT 57 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 120 A DELPEP LPGQWPFVRGGDP RDV+SGWKVAEAF A N +L ALG+G SA+ Sbjct 58 ALDELPEPSLPGQWPFVRGGDPRRDVNSGWKVAEAFGGAADPALVNETILDALGQGASAI 117 Query 121 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 180 ++ +G+ P+ + L GVYL+LAPV L+AGA+ V AL+ LD + D ++ Sbjct 118 VL----AGLPPEAVARALQGVYLDLAPVQLEAGAE---LAAVAEALLTTLDAYEGDAAAV 170 Query 181 --DLGADPLTASLRDRPAPPIEEVVAVASRAAGE-RGLRAITVDGPAFHNLGATAATELA 237 DLGADPL + DR I+E VA+A RA +RAITVDG H GA+ + ELA Sbjct 171 VADLGADPLGNAFADRAGISIDETVALARRATARAEQVRAITVDGTVAHESGASDSQELA 230 Query 238 ATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGD 297 VAA VAYLR+L +GL V++AL QISFR+AA DDQF+++AK RA R LWARVAEV G Sbjct 231 VAVAAGVAYLRLLQRAGLTVAEALEQISFRIAATDDQFLSIAKFRAARVLWARVAEVAGA 290 Query 298 PGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGT 357 P G AV+HA TS PMM QRDPWVNMLR TLAAFGAGVGGAD+V V FD AIPGG Sbjct 291 PDAGGAVIHAVTSEPMMAQRDPWVNMLRTTLAAFGAGVGGADSVRVRRFDDAIPGGLSAV 350 Query 358 AAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFV 417 + FA RIARNTQLLL+EESHV RVLDP GGSWF+E+LT+ LA++AW F IEA GGF Sbjct 351 SPAFAARIARNTQLLLIEESHVARVLDPGGGSWFIEDLTESLAQQAWSLFTEIEAAGGFE 410 Query 418 EAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEA 477 A + + +IA A+RADDIAHRR ++TGVNE+PNL E LPP T RYAA FE Sbjct 411 AATELIRERIAATRAQRADDIAHRRTSVTGVNEFPNLAEEPLPPHPGTG--YRYAADFEE 468 Query 478 LRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGN 537 LRDRSD LA +GARP LLLPLGPLAEHN+RTTFA+NLLASGGIEAI+PG +DA V Sbjct 469 LRDRSDAFLASSGARPSALLLPLGPLAEHNVRTTFASNLLASGGIEAINPGVLDASAVAG 528 Query 538 AVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAH--RPDEF 595 AVADAG+ +AVICGTD RY E +V AA+AAG++ VYLAGPEKA+ + A RPD + Sbjct 529 AVADAGA-RIAVICGTDGRYAAEAGAVVDAAKAAGITDVYLAGPEKAVAEVAEASRPDGY 587 Query 596 LTAKINVVQALSNLLTRLGA 615 LT KIN V+ALS +LT LGA Sbjct 588 LTMKINAVEALSAMLTTLGA 607 >gi|325676891|ref|ZP_08156564.1| methylmalonyl-CoA mutase [Rhodococcus equi ATCC 33707] gi|325552439|gb|EGD22128.1| methylmalonyl-CoA mutase [Rhodococcus equi ATCC 33707] Length=637 Score = 549 bits (1414), Expect = 6e-154, Method: Compositional matrix adjust. Identities = 340/622 (55%), Positives = 415/622 (67%), Gaps = 22/622 (3%) Query 10 DLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPP 69 D + W+ AVAGVL+KS R D+A+LG P++LLDT T DG + LY+ DELPE P Sbjct 9 DAARAYSEWQQAVAGVLAKSRRVDAAELGPEPQKLLDTTTYDGVTVSPLYSGRDELPEAP 68 Query 70 LPGQWPFVRGGDPLRDVHSGWKVAEAFPANGA-TADTNAAVLAALGEGVSALLIRVGESG 128 LPGQ+PFVRG D RDV+SGW V F + A N VL L GVSAL + VG Sbjct 69 LPGQFPFVRGADASRDVNSGWLVNARFGQDTQDAAAVNRTVLDGLENGVSALTLSVGGKN 128 Query 129 VAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALV-AQLDPGQ----RDTLSIDLG 183 + L A L+GV L+LAPV LDAGAD A + +L+ A+ G R + I L Sbjct 129 LPVAELEAALAGVLLDLAPVTLDAGADVAAAAQQLYSLLDARAAAGDGVSDRAQVRIGLA 188 Query 184 ADPLTASLRDRPAPPIEEVVAVASRAAGE-RGLRAITVDGPAFHNLGATAATELAATVAA 242 A PLT + +++ VA+A+ AA +RA+ VDG AFHN GA A EL A +AA Sbjct 189 ASPLTDAFSGASGVELDDAVALATAAAARTETVRALMVDGTAFHNAGAGDAEELGAAIAA 248 Query 243 AVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGA 302 V YLRVLT GL +S+AL Q+ FRLAA DDQF TLAK RA RQ+WARVA+V G G Sbjct 249 GVEYLRVLTTQGLTISEALGQLEFRLAATDDQFQTLAKFRAGRQVWARVAQVCGASEFGG 308 Query 303 AVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFA 362 AV HA TS MM+QRDPWVNMLR TLAAFGAGVGGAD+V V PFDVA+P G G + F+ Sbjct 309 AVQHAVTSAAMMSQRDPWVNMLRTTLAAFGAGVGGADSVTVLPFDVALPAGAAGVSKSFS 368 Query 363 RRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGF--VEAH 420 RIARNTQLLLLEESH+GRVLDP GSW+VE+LT+ +A +AW+ FQ IEA GG+ A Sbjct 369 ERIARNTQLLLLEESHLGRVLDPGAGSWYVEQLTEEIAAKAWEFFQQIEAAGGYRAALAA 428 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPT-------SPVRRYAA 473 +A +IA A R DIAHRR A+TG+NE+PNL E LP G +PV RYA+ Sbjct 429 GVVADRIAATKAARDADIAHRRTAVTGINEFPNLSEAPLPAGAAEAGAAVSGTPVARYAS 488 Query 474 GFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDA- 532 FEALRDRSD +LA GARP+VLL PLG +AEHN+RTTFA NLLASGGIEA++PG +D Sbjct 489 AFEALRDRSDAYLAANGARPQVLLAPLGSVAEHNVRTTFAANLLASGGIEAVNPGPLDPA 548 Query 533 -GTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALG---DA 588 G + AV ++G+ +AV+CGTD RY ++ A V A R AG+ +V LAGPEK D Sbjct 549 DGGIATAVKESGT-KIAVLCGTDKRYGEQGAAAVTALREAGIEQVLLAGPEKIFADVEDG 607 Query 589 AHRPDEFLTAKINVVQALSNLL 610 A RPD FLTA+I+ V AL+ LL Sbjct 608 AARPDGFLTARIDAVAALTELL 629 >gi|312139662|ref|YP_004006998.1| methylmalonyl-CoA mutase muta [Rhodococcus equi 103S] gi|311889001|emb|CBH48314.1| putative methylmalonyl-CoA mutase MutA [Rhodococcus equi 103S] Length=637 Score = 546 bits (1406), Expect = 6e-153, Method: Compositional matrix adjust. Identities = 338/622 (55%), Positives = 414/622 (67%), Gaps = 22/622 (3%) Query 10 DLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPP 69 D + W+ AVAGVL+KS R D+A+LG P++LLDT T DG + LY+ DELPE P Sbjct 9 DAARAYSEWQQAVAGVLAKSRRVDAAELGPEPQKLLDTTTYDGVTVSPLYSGRDELPEAP 68 Query 70 LPGQWPFVRGGDPLRDVHSGWKVAEAFPANGA-TADTNAAVLAALGEGVSALLIRVGESG 128 LPGQ+PFVRG D RDV+SGW V F + A N VL L GVSAL + VG Sbjct 69 LPGQFPFVRGADASRDVNSGWLVNARFGQDTQDAAAVNRTVLDGLENGVSALTLSVGGKN 128 Query 129 VAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALV-AQLDPGQ----RDTLSIDLG 183 + L A L+GV L+LAP+ LDAGAD A + +L+ A+ G R + I L Sbjct 129 LPVAELEAALAGVLLDLAPLTLDAGADVAAAAQQLYSLLDARAAAGDGVSDRAQVHIGLA 188 Query 184 ADPLTASLRDRPAPPIEEVVAVASRAAGE-RGLRAITVDGPAFHNLGATAATELAATVAA 242 A PLT + +++ VA+A+ AA +RA+ VDG AFHN GA A EL A +AA Sbjct 189 ASPLTDAFSGASGVELDDAVALATAAAARTETVRALMVDGTAFHNAGAGDAEELGAAIAA 248 Query 243 AVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGA 302 V YLR LT GL +S+AL Q+ FRLAA DDQF TLAK RA RQ+WARVA+V G G Sbjct 249 GVEYLRALTTQGLTISEALGQLEFRLAATDDQFQTLAKFRAGRQVWARVAQVCGASEFGG 308 Query 303 AVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFA 362 AV HA TS MM+QRDPWVNMLR TLAAFGAGVGGAD+V V PFDVA+P G G + F+ Sbjct 309 AVQHAVTSAAMMSQRDPWVNMLRTTLAAFGAGVGGADSVTVLPFDVALPAGAAGVSKSFS 368 Query 363 RRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGF--VEAH 420 RIARNTQLLLLEESH+GRVLDP GSW+VE+LT+ +A +AW+ FQ IEA GG+ A Sbjct 369 ERIARNTQLLLLEESHLGRVLDPGAGSWYVEQLTEEIAAKAWEFFQQIEAAGGYRAALAA 428 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPT-------SPVRRYAA 473 +A +IA A R DIAHRR A+TG+NE+PNL E LP G +PV RYA+ Sbjct 429 GVVADRIATTKAARDADIAHRRTAVTGINEFPNLSEAPLPAGAAEAGAAVSGTPVARYAS 488 Query 474 GFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDA- 532 FEALRDRSD +LA GARP+VLL PLG +AEHN+RTTFA NLLASGGIEA++PG +D Sbjct 489 AFEALRDRSDAYLAANGARPQVLLAPLGSVAEHNVRTTFAANLLASGGIEAVNPGPLDPA 548 Query 533 -GTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALG---DA 588 G + AV ++G+ +AV+CGTD RY ++ A V A R AG+ +V LAGPEK D Sbjct 549 DGGIATAVKESGT-KIAVLCGTDKRYGEQGAAAVTALREAGIEQVLLAGPEKIFADVEDG 607 Query 589 AHRPDEFLTAKINVVQALSNLL 610 A RPD FLTA+I+ V AL+ LL Sbjct 608 AARPDGFLTARIDAVAALTELL 629 >gi|226306575|ref|YP_002766535.1| methylmalonyl-CoA mutase small subunit [Rhodococcus erythropolis PR4] gi|226185692|dbj|BAH33796.1| methylmalonyl-CoA mutase small subunit [Rhodococcus erythropolis PR4] Length=631 Score = 538 bits (1385), Expect = 1e-150, Method: Compositional matrix adjust. Identities = 329/616 (54%), Positives = 414/616 (68%), Gaps = 19/616 (3%) Query 11 LEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPL 70 +EQ W+ +VAGVL+KS R D+A+LG P++LL+T T DG + LY+ DE PE L Sbjct 10 VEQAYAEWQRSVAGVLAKSRRVDAAELGPEPQKLLETVTYDGVTVAPLYSPRDERPEQSL 69 Query 71 PGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVA 130 PG +P+VRG D RDV++GW V+ AF + A+TN A+L AL GVSAL ++VG GV Sbjct 70 PGTFPYVRGVDAHRDVNAGWLVSAAF-GTASAAETNRAILDALENGVSALWLKVGADGVP 128 Query 131 PDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALV-AQLDPGQ----RDTLSIDLGAD 185 L A L GV L+LAP+ LDAGA+ A + +L+ A+ + G R ++ + LGA Sbjct 129 VTDLAAALEGVLLDLAPLTLDAGAEVNDAARALFSLLDARGEAGDGVSDRSSIRVHLGAA 188 Query 186 PLTASLRDRPAPPIE---EVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAA 242 PLT+S A +E V A AA + AITVDG AFHN GA A EL A +AA Sbjct 189 PLTSSFSG--AADVEFAGAVELAALAAARAETVHAITVDGTAFHNAGAGDAEELGAAIAA 246 Query 243 AVAYLRVLT-ESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGG 301 + YLR LT ESGL + AL Q++FR +A DDQF T+AK RA R +WAR+A+V G G Sbjct 247 GLEYLRALTAESGLTIGAALSQLAFRYSATDDQFQTIAKFRAARLVWARIAQVCGASDFG 306 Query 302 AAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGF 361 A HA TS MM QRDPWVNMLR TLAAFGAGVGGAD V V PFDVA+ G G + F Sbjct 307 GAPQHAVTSAAMMAQRDPWVNMLRTTLAAFGAGVGGADAVTVLPFDVALADGTLGVSKSF 366 Query 362 ARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHD 421 + RIARNTQLLLLEESH+GRVLDP+ GSW+VE+LT ++A AW+ FQ IEA GG++ A + Sbjct 367 SSRIARNTQLLLLEESHLGRVLDPSAGSWYVEDLTQQIAATAWEFFQEIEAAGGYLAALE 426 Query 422 --FLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPG--DPTSPVRRYAAGFEA 477 ++G+IA A+R DIAHR+ +TGVNE+PNLGE L +P V RYAA FEA Sbjct 427 AGIVSGRIAATKAKRDSDIAHRKTTVTGVNEFPNLGETPLSAEAVEPGQSVARYAAAFEA 486 Query 478 LRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVG- 536 LRDRSD LA GARP LL PLG +AEHN+RTTFA+NLLASGGI+A++PG ++ G Sbjct 487 LRDRSDAFLAAGGARPTALLAPLGSVAEHNVRTTFASNLLASGGIDAVNPGPLEVGAEAI 546 Query 537 NAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAA--HRPDE 594 +A A +VAV+CGTD RY + A V RAAG+++V LAGPEKA+ DA RPD Sbjct 547 SAAVKASGVTVAVLCGTDKRYGESAAAAVAELRAAGITKVLLAGPEKAVADATGESRPDG 606 Query 595 FLTAKINVVQALSNLL 610 FLTA+I+ V AL+ LL Sbjct 607 FLTARIDAVSALTELL 622 >gi|226366426|ref|YP_002784209.1| methylmalonyl-CoA mutase small subunit [Rhodococcus opacus B4] gi|226244916|dbj|BAH55264.1| methylmalonyl-CoA mutase small subunit [Rhodococcus opacus B4] Length=638 Score = 537 bits (1384), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 328/606 (55%), Positives = 407/606 (68%), Gaps = 14/606 (2%) Query 18 WRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPFV 77 W+++VAGVL+KS R D+A+LG P++LL+T T DG + LY+ DE PE PLPG +P+V Sbjct 17 WQHSVAGVLAKSRRIDAAELGPEPQKLLETVTYDGVTVAPLYSPRDERPEQPLPGTFPYV 76 Query 78 RGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVAPDRLTAL 137 RG D RDV++GW V+ F AD N +VL +L GVSAL + VG + + L A Sbjct 77 RGADATRDVNAGWLVSARFGEGAEAADVNRSVLDSLENGVSALWLAVGGTDLPVRSLEAA 136 Query 138 LSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPG-----QRDTLSIDLGADPLTASLR 192 L GV L+LAP+ LDAG D A + AL+ R + +DLGA PLT++ Sbjct 137 LDGVLLDLAPLTLDAGTDAPLAARALFALLDARAAAGDGVTDRTAVRVDLGAAPLTSAFA 196 Query 193 DRPAPPIEEVVAVASRAAG-ERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLT 251 + + V +A+ +A +RAI VDG AFH+ GA+ A EL A++AA + YLRVLT Sbjct 197 GTADVELGDAVTLATESAARSESVRAIAVDGTAFHDAGASDAEELGASIAAGLEYLRVLT 256 Query 252 ESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSL 311 SGL + AL Q+ FR +A DDQF T+AK RA R +WAR+A+V G G A HA TS Sbjct 257 ASGLTIGQALGQLGFRFSATDDQFQTIAKFRAARLVWARIAQVCGASDFGGAPQHAVTSA 316 Query 312 PMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQL 371 MM QRDPWVNMLR TLAAFGAGVGGAD V V PFD A+P G G + FA RIARNTQL Sbjct 317 AMMAQRDPWVNMLRTTLAAFGAGVGGADAVTVLPFDSALPAGALGVSKTFAARIARNTQL 376 Query 372 LLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHD--FLAGQIAE 429 LLLEESH+GRVLDPA GSW+VE+LT ++A RAW+ FQ IEA GG++ A D + +IA Sbjct 377 LLLEESHLGRVLDPAAGSWYVEDLTQQVAARAWEFFQQIEAAGGYLAALDAGLIGERIAS 436 Query 430 CAARRADDIAHRRLAITGVNEYPNLGEPALPPG-DPTSPVRRYAAGFEALRDRSDHHLAR 488 A+R DIAHR+ +TGVNE+PNLGE LP G T V RYAA FEALRDRSD +LA Sbjct 437 TRAQRDSDIAHRKTTVTGVNEFPNLGEAPLPAGAAETGRVARYAAAFEALRDRSDAYLAA 496 Query 489 TGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPG--TVDAGTVGNAVADAGSPS 546 GARP V L PLGP+AEHN+RTTF+ NLLASGGIEA +PG V G++ A D+G+ Sbjct 497 HGARPAVFLAPLGPVAEHNVRTTFSANLLASGGIEARNPGPLAVGDGSIAAAAKDSGA-G 555 Query 547 VAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDA--AHRPDEFLTAKINVVQ 604 +AVICGTD RY E A V+ RAAG+ V LAGPEKA+ DA A RPD F+TA+I+ V Sbjct 556 IAVICGTDKRYAAEAAAAVEELRAAGIGTVLLAGPEKAVADADGAARPDGFVTARIDAVS 615 Query 605 ALSNLL 610 LS LL Sbjct 616 VLSGLL 621 >gi|229493523|ref|ZP_04387308.1| methylmalonyl-CoA mutase, small subunit [Rhodococcus erythropolis SK121] gi|229319484|gb|EEN85320.1| methylmalonyl-CoA mutase, small subunit [Rhodococcus erythropolis SK121] Length=631 Score = 536 bits (1380), Expect = 6e-150, Method: Compositional matrix adjust. Identities = 327/616 (54%), Positives = 411/616 (67%), Gaps = 19/616 (3%) Query 11 LEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPL 70 +EQ W+ +VAGVL+KS R D+A+LG P++LL+T T DG + LY+ DE PE L Sbjct 10 VEQAYAEWQRSVAGVLAKSRRVDAAELGPEPQKLLETVTYDGVTVAPLYSPRDERPEQSL 69 Query 71 PGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVA 130 PG +P+VRG D RDV++GW V+ AF + A+TN A+L AL GVSAL ++VG GV Sbjct 70 PGTFPYVRGVDAHRDVNAGWLVSAAF-GTASAAETNRAILDALENGVSALWLKVGADGVP 128 Query 131 PDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALV-AQLDPGQ----RDTLSIDLGAD 185 L A L GV L+LAP+ DAGA A + +L+ A+ + G R ++ + LGA Sbjct 129 VTDLAAALEGVLLDLAPLTFDAGAATNDAARALFSLLDARGEAGDGVSDRSSIRVHLGAA 188 Query 186 PLTASLRDRPAPPIEEVVAVASRAAGE---RGLRAITVDGPAFHNLGATAATELAATVAA 242 PLT+S A +E AV A + AITVDG AFHN GA A EL A +AA Sbjct 189 PLTSSFSG--AADVELAGAVELAALAAARAETVHAITVDGTAFHNAGAGDAEELGAAIAA 246 Query 243 AVAYLRVLT-ESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGG 301 + YLR LT +SGL + AL Q++FR AA DDQF T+AK RA R +WAR+A+V G G Sbjct 247 GLEYLRALTAQSGLTIGAALSQLAFRYAATDDQFQTIAKFRAARLVWARIAQVCGASDFG 306 Query 302 AAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGF 361 A HA TS MM QRDPWVNMLR TLAAFGAGVGGAD V V PFDVA+ G G + F Sbjct 307 GAPQHAVTSAAMMAQRDPWVNMLRTTLAAFGAGVGGADAVTVLPFDVALADGTLGVSKSF 366 Query 362 ARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHD 421 + RIARNTQLLLLEESH+GRVLDP+ GSW+VE+LT ++A AW+ FQ IEA GG++ A + Sbjct 367 SSRIARNTQLLLLEESHLGRVLDPSAGSWYVEDLTQQIAATAWEFFQEIEAAGGYLAALE 426 Query 422 --FLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPG--DPTSPVRRYAAGFEA 477 ++G+IA A+R DIAHR+ +TGVNE+PNLGE L +P V RYAA FEA Sbjct 427 AGIVSGRIAATKAKRDSDIAHRKTTVTGVNEFPNLGETPLSAEAVEPGQSVARYAAAFEA 486 Query 478 LRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVG- 536 LRDRSD LA GARP LL PLG +AEHN+RTTFA+NLLASGGI+A++PG ++ G Sbjct 487 LRDRSDAFLAAGGARPTALLAPLGSVAEHNVRTTFASNLLASGGIDAVNPGPLEVGAEAI 546 Query 537 NAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAA--HRPDE 594 +A A +VAV+CGTD RY + A V RAAG+++V LAGPEKA+ DA RPD Sbjct 547 SAAVKASGATVAVLCGTDKRYGESAAAAVAELRAAGIAKVLLAGPEKAVADATGDSRPDG 606 Query 595 FLTAKINVVQALSNLL 610 FLTA+I+ V AL+ LL Sbjct 607 FLTARIDAVSALTELL 622 >gi|111024183|ref|YP_707155.1| methylmalonyl-CoA mutase small subunit [Rhodococcus jostii RHA1] gi|110823713|gb|ABG98997.1| methylmalonyl-CoA mutase small subunit [Rhodococcus jostii RHA1] Length=638 Score = 529 bits (1362), Expect = 7e-148, Method: Compositional matrix adjust. Identities = 325/606 (54%), Positives = 400/606 (67%), Gaps = 14/606 (2%) Query 18 WRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPFV 77 W+++VAGVL+KS R D+A+LG P++LL+T T DG + LY+ DE PE PLPG +P+V Sbjct 17 WQHSVAGVLAKSRRIDAAELGPEPQKLLETVTYDGVTVAPLYSPRDERPEQPLPGTFPYV 76 Query 78 RGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVAPDRLTAL 137 RG D RDV++GW V+ F AD N AVL +L GVSAL + VG + + L Sbjct 77 RGADATRDVNAGWLVSARFGEGAEAADVNRAVLDSLENGVSALWLAVGGADLPVRSLETA 136 Query 138 LSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPG-----QRDTLSIDLGADPLTASLR 192 L GV L+LAP+ LDAG D A + AL+ R + + LG PLT++ Sbjct 137 LDGVLLDLAPLTLDAGTDAPLAARALFALLDARAAAGDGVTDRTAVRVGLGTAPLTSAFS 196 Query 193 DRPAPPI-EEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLT 251 + + V A A+ +RAITVDG AFHN GA+ A EL A +AA + YLR LT Sbjct 197 GTADVALGDAVALAAEAASRAESVRAITVDGTAFHNAGASDAEELGAAIAAGLEYLRALT 256 Query 252 ESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSL 311 ESGL + AL Q+ FR +A DDQF T+AK RA R +WAR+A+V G G A HA TS Sbjct 257 ESGLTIGQALGQLGFRFSATDDQFQTIAKFRAARLVWARIAQVCGASDFGGAPQHAVTSA 316 Query 312 PMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQL 371 MM QRDPWVNMLR TLAAFGAGVGGAD V V PFD A+P G G + FA RIARNTQL Sbjct 317 AMMAQRDPWVNMLRTTLAAFGAGVGGADAVTVLPFDAALPAGALGVSKTFAARIARNTQL 376 Query 372 LLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHD--FLAGQIAE 429 LLLEESH+GRVLDPA GSW+VE+LT ++A +AW+ FQ IEA GG++ A D ++ +IA Sbjct 377 LLLEESHLGRVLDPASGSWYVEDLTQQVAAKAWEFFQQIEAAGGYLAALDAGLISERIAA 436 Query 430 CAARRADDIAHRRLAITGVNEYPNLGEPALPPG-DPTSPVRRYAAGFEALRDRSDHHLAR 488 A+R DIAHR+ +TGVNE+PNL E LP G T V RYAA FEALRDRSD +LA Sbjct 437 TRAQRDSDIAHRKTTVTGVNEFPNLAEAPLPAGAAETGSVARYAAAFEALRDRSDAYLAA 496 Query 489 TGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPG--TVDAGTVGNAVADAGSPS 546 GARP V L PLGP+AEHN+RTTFA NLLASGGIEA +PG V G++ A D+G+ Sbjct 497 HGARPAVFLAPLGPVAEHNVRTTFAANLLASGGIEARNPGPLAVGDGSIAAAAKDSGA-G 555 Query 547 VAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDA--AHRPDEFLTAKINVVQ 604 +AVICGTD RY E V+ RAAGV V LAGPEK + DA + RPD F+TA+I+ V Sbjct 556 IAVICGTDKRYAAEATAAVEELRAAGVGTVLLAGPEKVVADADGSARPDGFVTARIDAVS 615 Query 605 ALSNLL 610 LS LL Sbjct 616 VLSGLL 621 >gi|54025437|ref|YP_119679.1| putative methylmalonyl-CoA mutase subunit beta [Nocardia farcinica IFM 10152] gi|54016945|dbj|BAD58315.1| putative methylmalonyl-CoA mutase beta subunit [Nocardia farcinica IFM 10152] Length=621 Score = 508 bits (1309), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 318/608 (53%), Positives = 390/608 (65%), Gaps = 16/608 (2%) Query 18 WRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPFV 77 WR VAGVL+K+ + D A L D PE+LL T DG A+ LYT DE PEPPLPG +PFV Sbjct 20 WRKGVAGVLAKARKVDVADLPDEPEQLLTQTTYDGLAVAPLYTRRDERPEPPLPGVFPFV 79 Query 78 RGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVAPDRLTAL 137 RG D RDVH GW V A A N +LA L G+SA+ + VGE GV L Sbjct 80 RGRDATRDVHRGWDVCADITETDAAA-ANRELLAGLENGLSAVRVGVGEHGVPVAELPTA 138 Query 138 LSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDRPAP 197 L G+ LAP+ L AGA A + A++ R + I LGA PLT+ Sbjct 139 LRGLLFELAPLSLAAGAALPEAAAQLYAVLDDYRVDDRAAIRIGLGAAPLTSRFAGAADV 198 Query 198 PIEEVVAVASRA-AGERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTESGLV 256 + V +A +A A +RAITVDG FHN GA+ A EL A VAA + YLR LT +G+ Sbjct 199 DSDRAVELAKQAVARTETVRAITVDGTVFHNAGASDAQELGAAVAAGLEYLRALTGAGVD 258 Query 257 VSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQ 316 ++DAL Q+ FRLAA DDQF T+AK RA R +WARVA V G P G A HA TS MM++ Sbjct 259 IADALGQLEFRLAATDDQFATIAKFRAARTVWARVAHVCGAPDFGGAPQHAVTSAAMMSK 318 Query 317 RDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEE 376 RDPWVNMLR TLAAFGAGVGGAD++ V PFD A+P G G + F+ R+ARNTQLLLLEE Sbjct 319 RDPWVNMLRTTLAAFGAGVGGADSLTVLPFDCALPPGELGVSKSFSDRMARNTQLLLLEE 378 Query 377 SHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHD--FLAGQIAECAARR 434 SH+G V DP GSW++E+ T +LA +AW+ Q +E GG+ A D LA +IAE R Sbjct 379 SHLGHVQDPGAGSWYIEDYTAKLAAKAWEFMQELEKAGGYRAALDAGLLARRIAETKTTR 438 Query 435 ADDIAHRRLAITGVNEYPNLGEPALP-----PGDPTSPVRRYAAGFEALRDRSDHHLART 489 D+AHRR A+TGVNE+PNL E L PG+ + RY A FEALRDRSD +L Sbjct 439 DADVAHRRTAVTGVNEFPNLAEKPLSAQARTPGE----IARYGAAFEALRDRSDAYLEAN 494 Query 490 GARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAV 549 GARP+ LL+PLG +AEHN+R TF NLLASGGIE+++PG ++ V A +AG+P +AV Sbjct 495 GARPKALLVPLGTVAEHNVRVTFIANLLASGGIESVNPGPLEVSAVEAAAKEAGAP-IAV 553 Query 550 ICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALG--DAAHRPDEFLTAKINVVQALS 607 +CG+DARY E V A RAAGV V LAG EKA+ DAA RPD FLTAKI+ V LS Sbjct 554 LCGSDARYGAEAGAAVAALRAAGVETVLLAGAEKAVADLDAAQRPDGFLTAKIDAVAQLS 613 Query 608 NLLTRLGA 615 LL ++GA Sbjct 614 GLLEKVGA 621 >gi|333919600|ref|YP_004493181.1| methylmalonyl-CoA mutase [Amycolicicoccus subflavus DQS3-9A1] gi|333481821|gb|AEF40381.1| Methylmalonyl-CoA mutase [Amycolicicoccus subflavus DQS3-9A1] Length=654 Score = 500 bits (1288), Expect = 3e-139, Method: Compositional matrix adjust. Identities = 319/627 (51%), Positives = 400/627 (64%), Gaps = 32/627 (5%) Query 18 WRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPFV 77 WR +VAGVL+KS R +LG+ PE LL +T DG IR LYT+ D++PE PLPGQ+PF Sbjct 28 WRRSVAGVLAKSRRVSPDELGERPEDLLAIRTEDGVTIRPLYTSADDVPEQPLPGQFPFT 87 Query 78 RGGDPLRDVHSGWKVAEAFPANGATAD-TNAAVLAALGEGVSALLIRVGESGVAPDRLTA 136 RGGDPLRDV+ GW V F N + N ++LAAL G SAL + VG + + + Sbjct 88 RGGDPLRDVNRGWSVMARFGVNERDPEAVNESILAALESGTSALWLAVGGDNLPVEAIDR 147 Query 137 LLSGVYLNLAPVILDAGADYRPACDVMLALV---AQLDPG--QRDTLSIDLGADPLTASL 191 L GV L+LAP+ LDAG A + +LAL+ A+ G R +SI LGA PLT Sbjct 148 ALKGVLLDLAPLTLDAGDQAGAAANAVLALLDARAREGDGVTDRSRVSIGLGAAPLTTLF 207 Query 192 RDRPAP----------PIEEVVAVASRAAG-ERGLRAITVDGPAFHNLGATAATELAATV 240 + +P + V +A+ A E +RA+ VD FH+ G++ A E+ A Sbjct 208 ANNYSPLGDTAKLRSVDLPGAVRLAATAVNREETIRALMVDATVFHDAGSSDAQEIGAAC 267 Query 241 AAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGG 300 AA V Y+ + E+GL + AL QI FR AA DDQF + AK RA RQ+WARVA+V+G Sbjct 268 AAGVEYVEAMLEAGLSIDHALGQIEFRFAATDDQFQSTAKFRAARQVWARVADVLGARDA 327 Query 301 GAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 360 GAA HA TS MMTQRDPWVNMLR T+AAFGAGVGGADTV V PFD A+P G G A Sbjct 328 GAAPQHAVTSSAMMTQRDPWVNMLRTTVAAFGAGVGGADTVTVLPFDAALPAGALGVADS 387 Query 361 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGF---V 417 F++RIARNTQLLL+EES++GRVLDPAGGSW+VE+LT LA AW Q+I+ GGF V Sbjct 388 FSQRIARNTQLLLIEESNLGRVLDPAGGSWYVEKLTSDLAHAAWAVLQSIDGAGGFSATV 447 Query 418 EAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPG-DPTSPVR------- 469 E+ +L G+I E A R +I+ R++ +TGVNE+P+ E LP G D T P R Sbjct 448 ESG-WLCGKIEEVRAHRETEISRRKIKLTGVNEFPDSAEKPLPVGPDGTVPDRLAAGRVF 506 Query 470 RYAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGT 529 RYA FE LR+RSD HLA G+RP V L PLGPLAEHNIRTTF NLL SGGIEA++PG Sbjct 507 RYAEPFEKLRNRSDLHLADNGSRPTVFLAPLGPLAEHNIRTTFIANLLGSGGIEAVNPGA 566 Query 530 VDAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAA 589 V++ + +A +G+ VAVICGTD RY E D V+A R AG++ V LAGP+ A D Sbjct 567 VESSGLADAARQSGT-RVAVICGTDKRYAQEAPDAVRALREAGMTSVMLAGPQSAYPDEN 625 Query 590 H--RPDEFLTAKINVVQALSNLLTRLG 614 PD +L A I+ V AL+ LL LG Sbjct 626 TDVSPDAYLGAGIDAVAALAELLDTLG 652 >gi|213965564|ref|ZP_03393758.1| methylmalonyl-CoA mutase, small subunit [Corynebacterium amycolatum SK46] gi|213951723|gb|EEB63111.1| methylmalonyl-CoA mutase, small subunit [Corynebacterium amycolatum SK46] Length=630 Score = 482 bits (1240), Expect = 9e-134, Method: Compositional matrix adjust. Identities = 294/622 (48%), Positives = 379/622 (61%), Gaps = 23/622 (3%) Query 10 DLEQVRGRWRNAVAGVLSKSNRTDSAQLG-DHPERLLDTQTADGFAIRALYTAFDELPEP 68 + E+++ W VA V ++ ++ D A + D +RL+ T T DG +R LYT DEL E Sbjct 16 NFEELQNSWYQGVAKVFARVHKQDVADVPLDIWKRLIQT-TYDGVDVRPLYTRADELAES 74 Query 69 PLPGQWPFVRGGDPLRDVHSGWKVAEAF----PANGAT--ADTNAAVLAALGEGVSALLI 122 P PGQ+PFVRG D +GW V E F P A N +L AL G + + + Sbjct 75 PAPGQFPFVRGAKVTSDNTNGWGVRETFGRQYPGEDALDPKTVNETLLTALENGTTDIRL 134 Query 123 RVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDL 182 S A D + ALL+ VY++LAP+ + AG + + + + Q +P D ++++L Sbjct 135 DFTGSLEAAD-VAALLNNVYVDLAPIAVHAGKKTAQVAEALTSYIEQANPANPDNVAVEL 193 Query 183 GADPLTASLRDRPAPPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVA 241 A PLT++ ++E +A +AA + G +RA+ VDG F NLGA E+ ++A Sbjct 194 SAAPLTSAFAGIDDVSLDEATQLAVKAAKQPGDVRALLVDGVVFSNLGANNIQEIGYSLA 253 Query 242 AAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGG 301 VAYLR LTE+GL +AL QI+FR AA DDQF T+AK RA R LWARVAEVVG P G Sbjct 254 VGVAYLRALTEAGLSAEEALGQIAFRFAATDDQFDTIAKFRAARVLWARVAEVVGAPEAG 313 Query 302 AAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGF 361 A +HA T+ M +QRDPWVNMLR T+A+F AGVGGA +V V PFD A+ GG P + F Sbjct 314 RAPMHAVTAPVMFSQRDPWVNMLRVTVASFAAGVGGASSVEVLPFDYAVVGGMPNVSKTF 373 Query 362 ARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH- 420 RIARNT LLLLEESH+G V DPAGGS+FVE+LT+ +A +AW+ F EA GGF A Sbjct 374 KARIARNTNLLLLEESHLGYVADPAGGSYFVEDLTEEMADKAWEIFTGTEAAGGFTSAEA 433 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPAL-----PPGDPTSPVRRYAAGF 475 D A A RRA DIAHRR +T +NE+PNL E L P GD P+RR+A+ F Sbjct 434 DVRAALDATWEKRRA-DIAHRRTKVTAINEFPNLAEAPLAPEARPEGD---PIRRWASDF 489 Query 476 EALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTV 535 EALR+RSD LA G RP + +LPLGPLA+HNIRT F +NLLASGGI +PG V G Sbjct 490 EALRNRSDDFLAEKGNRPLIAMLPLGPLAKHNIRTGFTSNLLASGGIAVANPGQVVPGEA 549 Query 536 GNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAH--RPD 593 G A SP + V+C D+ Y D V+AARAAG V +AG EK+ +AA RPD Sbjct 550 GFEEAVKASP-IVVLCAADSEYEASGQDAVKAARAAGAKEVLVAGSEKSFANAAEDARPD 608 Query 594 EFLTAKINVVQALSNLLTRLGA 615 +L I+ V LS LL LGA Sbjct 609 GYLNMTIDAVAELSRLLNELGA 630 >gi|167968015|ref|ZP_02550292.1| methylmalonyl-CoA mutase small subunit mutA [Mycobacterium tuberculosis H37Ra] Length=253 Score = 479 bits (1234), Expect = 5e-133, Method: Compositional matrix adjust. Identities = 245/245 (100%), Positives = 245/245 (100%), Gaps = 0/245 (0%) Query 1 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 60 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT Sbjct 9 VSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYT 68 Query 61 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 120 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL Sbjct 69 AFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSAL 128 Query 121 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 180 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI Sbjct 129 LIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI 188 Query 181 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 240 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV Sbjct 189 DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATV 248 Query 241 AAAVA 245 AAAVA Sbjct 249 AAAVA 253 >gi|343927976|ref|ZP_08767442.1| methylmalonyl-CoA mutase small subunit [Gordonia alkanivorans NBRC 16433] gi|343762199|dbj|GAA14368.1| methylmalonyl-CoA mutase small subunit [Gordonia alkanivorans NBRC 16433] Length=644 Score = 478 bits (1231), Expect = 9e-133, Method: Compositional matrix adjust. Identities = 315/630 (50%), Positives = 391/630 (63%), Gaps = 25/630 (3%) Query 6 PERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDEL 65 PE +DL+ W A A VL+KS R D +L D PE LL T TADG IR LYT DE Sbjct 10 PE-SDLDGAYQAWSKAAAAVLAKSRRVDVDELPDTPEALLSTDTADGLTIRPLYTRRDET 68 Query 66 PEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATA-DTNAAVLAALGEGVSALLIRV 124 EP LPG++PFVRG DP RDV +GW+V E F + A D N VL A+ G S L + V Sbjct 69 TEPGLPGRFPFVRGADPARDVTTGWRVTERFGDDETPAEDVNELVLEAMTNGTSGLWLSV 128 Query 125 GE--SGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSI-- 180 G+ G+ L A+L GVYL+L PV LDAG + A +LAL + Sbjct 129 GKPGGGLGVTDLAAVLRGVYLDLVPVTLDAGTEGIAAARELLALKEKAQAAPVAAAPTAA 188 Query 181 ---DLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELA 237 G PLTA+ R +E A+A+ G+R VDG F GA ELA Sbjct 189 TTHSFGLSPLTAAFSGRATVDADEATALAASNL-PVGVRTFRVDGSDFATAGADNGLELA 247 Query 238 ATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGD 297 VAAAVA+LR LT +GL AL QI+F ++ADDDQF T+AK RALR++WARVAEVVG Sbjct 248 LVVAAAVAHLRDLTAAGLTAEAALNQITFGVSADDDQFATIAKFRALRKIWARVAEVVGA 307 Query 298 PGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGT 357 P G A+ H T L M +QRDPWVNMLR T+AAFGAGVGGAD + V +D IP + Sbjct 308 PDAGGAITHGVTDLSMYSQRDPWVNMLRSTIAAFGAGVGGADQLTVLAYDATIPADKRTS 367 Query 358 AAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFV 417 +A F+RRIARNTQLLLLEES++GRVLDPAGGSWFVE LTD LA AW F +EA GG+ Sbjct 368 SASFSRRIARNTQLLLLEESNIGRVLDPAGGSWFVESLTDDLAANAWAVFTEVEAAGGYR 427 Query 418 EAHD--FLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALP--PGDPTSPVRRYAA 473 A D ++A ++ ARR ++AHRR+++TGVNE+PN+ E AL G P S V Sbjct 428 AALDNGWIAEKVEASLARRDAEVAHRRISVTGVNEFPNIDERALSDAQGVPASNVTDVVT 487 Query 474 G----------FEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIE 523 G FEALRDRSD LA GARP +LL+PLG +AEHN RTTF NLL +GGI Sbjct 488 GTPKLARVGRAFEALRDRSDVVLAEQGARPSILLIPLGSVAEHNGRTTFVANLLGAGGIT 547 Query 524 AIDPGTVDAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEK 583 ++PG + A +G+A A A +P +AVICGT ARY +E + AARAAG+++V LAGP++ Sbjct 548 VVNPGPLTADQIGDAFAGANTP-IAVICGTKARYAEEGPAALAAARAAGLAKVLLAGPDR 606 Query 584 ALGDAAHRPDEFLTAKINVVQALSNLLTRL 613 ++ RPD L I+ V LS LL +L Sbjct 607 EWPESGDRPDGSLRVGIDAVSTLSELLDQL 636 >gi|227542094|ref|ZP_03972143.1| methylmalonyl-CoA mutase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182145|gb|EEI63117.1| methylmalonyl-CoA mutase [Corynebacterium glucuronolyticum ATCC 51866] Length=619 Score = 467 bits (1201), Expect = 3e-129, Method: Compositional matrix adjust. Identities = 269/617 (44%), Positives = 368/617 (60%), Gaps = 11/617 (1%) Query 5 VPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLG-DHPERLLDTQTADGFAIRALYTAFD 63 P AD E+ + W A A V ++ ++ D A + D +RL+ T T D I+ L+T D Sbjct 8 TPLPADFEETQQEWCKAAAKVFARVHKKDVADVPLDIWKRLIRT-TYDDIKIKPLFTRAD 66 Query 64 ELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIR 123 EL E P PG++P++RG + GW + E F A G TN VL AL G +++++ Sbjct 67 ELAEAPEPGKFPYLRGAKGPSEKAEGWGITERFGAEGDAKTTNEKVLHALNYGTNSIVVD 126 Query 124 V-GESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDL 182 + G+ +AP L L V APV L+AG D A V+L L + + + + + I+ Sbjct 127 LRGDDHIAPADLKQALDKVLFAYAPVRLEAGKDAVEAAKVLLELASGQE--KEEEIHIEF 184 Query 183 GADPLTASLRDRPAPPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVA 241 GA PLTAS D + I++ V +A + RAI VDG +F N GA+ E+ +A Sbjct 185 GASPLTASYDDSESVSIDDAVELAKLGNEAKADARAILVDGVSFSNQGASDGEEIGFVLA 244 Query 242 AAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGG 301 AAV YLR L ++GL DA Q+SFR AA D+QF + K RA R LWARVAEV+G P Sbjct 245 AAVEYLRKLVDAGLSAEDAFNQLSFRFAATDEQFNEITKFRAARILWARVAEVLGVPELA 304 Query 302 AAV-VHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAG 360 A HA T+ M TQRDPWVNMLR T+AAF AGVGG+ + V PFD AI GG P T+ Sbjct 305 AHTPQHAITAPVMFTQRDPWVNMLRSTVAAFSAGVGGSTDMEVLPFDFAIKGGLPNTSRD 364 Query 361 FARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAH 420 F RIARNT LLL+EESH+G V+DPAGG+++ E+LT +A AW+ F +E++GGF A Sbjct 365 FVHRIARNTNLLLIEESHLGYVIDPAGGAYYAEKLTQEVAETAWKLFTEVESKGGFTAAA 424 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP--VRRYAAGFEAL 478 DF+ + + R +DI+ R+ ++T +NE+PNL E L T P VRR+AA FEA+ Sbjct 425 DFIRETLDATSKARYEDISRRKKSVTAINEFPNLAEKPLSKESRTEPKGVRRWAAEFEAM 484 Query 479 RDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNA 538 R+RSD +L G RP V L+PLGPLA+HNIRT + TNL+ +GGI +PG V G G Sbjct 485 RNRSDDYLEEHGVRPTVGLIPLGPLAKHNIRTGWITNLVGTGGIAVNNPGQVVPGEDGFK 544 Query 539 VADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTA 598 A A + + +ICG D Y + ++A R G + + LAG EK+ PD +L Sbjct 545 EA-ADAADILIICGNDKEYEASGLEALKALRETGKT-ILLAGSEKSFEGKEDAPDGYLNV 602 Query 599 KINVVQALSNLLTRLGA 615 KIN + LS++LT+LGA Sbjct 603 KINAGETLSDMLTKLGA 619 >gi|227488912|ref|ZP_03919228.1| methylmalonyl-CoA mutase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091096|gb|EEI26408.1| methylmalonyl-CoA mutase [Corynebacterium glucuronolyticum ATCC 51867] Length=610 Score = 467 bits (1201), Expect = 3e-129, Method: Compositional matrix adjust. Identities = 268/613 (44%), Positives = 367/613 (60%), Gaps = 11/613 (1%) Query 9 ADLEQVRGRWRNAVAGVLSKSNRTDSAQLG-DHPERLLDTQTADGFAIRALYTAFDELPE 67 AD E+ + W A A V ++ ++ D A + D +RL+ T T D I+ L+T DEL E Sbjct 3 ADFEETQQEWCKAAAKVFARVHKKDVADVPLDIWKRLIRT-TYDDIKIKPLFTRADELAE 61 Query 68 PPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRV-GE 126 P PG++P++RG + GW + E F A G TN VL AL G +++++ + G+ Sbjct 62 APEPGKFPYLRGAKGPSEKAEGWGITERFGAEGDAKTTNEKVLHALNYGTNSIVVDLRGD 121 Query 127 SGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADP 186 +AP L L V APV L+AG D A V+L L + + + + + I+ GA P Sbjct 122 DHIAPADLKQALDKVLFAYAPVRLEAGKDAVEAAKVLLELASGQE--KEEEIHIEFGASP 179 Query 187 LTASLRDRPAPPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVAAAVA 245 LTAS D + I++ V +A + RAI VDG +F N GA+ E+ +AAAV Sbjct 180 LTASYDDSESVSIDDAVELAKLGNEAKADARAILVDGVSFSNQGASDGEEIGFVLAAAVE 239 Query 246 YLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAV- 304 YLR L ++GL DA Q+SFR AA D+QF + K RA R LWARVAEV+G P A Sbjct 240 YLRKLVDAGLSAEDAFNQLSFRFAATDEQFNEITKFRAARILWARVAEVLGVPELAAHTP 299 Query 305 VHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARR 364 HA T+ M TQRDPWVNMLR T+AAF AGVGG+ + V PFD AI GG P T+ F R Sbjct 300 QHAITAPVMFTQRDPWVNMLRSTVAAFSAGVGGSTDMEVLPFDFAIKGGLPNTSRDFVHR 359 Query 365 IARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLA 424 IARNT LLL+EESH+G V+DPAGG+++ E+LT +A AW+ F +E++GGF A DF+ Sbjct 360 IARNTNLLLIEESHLGYVIDPAGGAYYAEKLTQEVAETAWKLFTEVESKGGFTAAADFIR 419 Query 425 GQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP--VRRYAAGFEALRDRS 482 + + R +DI+ R+ ++T +NE+PNL E L T P VRR+AA FEA+R+RS Sbjct 420 ETLDATSKARYEDISRRKKSVTAINEFPNLAEKPLSKESRTEPKGVRRWAAEFEAMRNRS 479 Query 483 DHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADA 542 D +L G RP V L+PLGPLA+HNIRT + TNL+ +GGI +PG V G G A A Sbjct 480 DDYLEEHGVRPTVGLIPLGPLAKHNIRTGWITNLVGTGGIAVNNPGQVVPGEDGFKEA-A 538 Query 543 GSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINV 602 + + +ICG D Y + ++A R G + + LAG EK+ PD +L KIN Sbjct 539 DAADILIICGNDKEYEASGLEALKALRETGKT-ILLAGSEKSFEGKEDAPDGYLNVKINA 597 Query 603 VQALSNLLTRLGA 615 + LS++LT+LGA Sbjct 598 GETLSDMLTKLGA 610 >gi|319949213|ref|ZP_08023300.1| methylmalonyl-CoA mutase, beta subunit [Dietzia cinnamea P4] gi|319437127|gb|EFV92160.1| methylmalonyl-CoA mutase, beta subunit [Dietzia cinnamea P4] Length=596 Score = 464 bits (1194), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 299/601 (50%), Positives = 362/601 (61%), Gaps = 21/601 (3%) Query 25 VLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPFVRGGDPLR 84 VL+K+ R D A + + R L T DG I LYT DE+ E P PGQ+PFVRGGD Sbjct 4 VLAKAARKDPADMPEDAWRALVATTRDGIEINPLYTRVDEIAERPAPGQFPFVRGGDRSG 63 Query 85 DVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVAPDRLTALLSGVYLN 144 SGW V+ A G ++ N VL L +GVSAL + V + +A +L VYL+ Sbjct 64 LPESGWHVSARVEATGDASELNTEVLDLLNQGVSALWLSVPAADLA-----GVLKDVYLD 118 Query 145 LAPVILDAGADYRPACDVMLALVAQLDPG-----QRDTLSIDLGADPLTASLRDRPAPPI 199 LAPV DAGAD L L+ Q R + DLGA P+TA + + Sbjct 119 LAPVTFDAGADLDEVAGAFLDLLDQRRSAGDGVADRAAVIADLGAAPVTAGYAGADSIGL 178 Query 200 EEVVAVASRAAG-ERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTESGLVVS 258 E VA+A+R + E +RA DG FH+ GA A ELA VAA + Y+R + +G+ + Sbjct 179 EAAVALAARMSEREETIRAFVADGTVFHDDGAGDAQELAYAVAAGLEYVRAMVSAGVPAA 238 Query 259 DALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQRD 318 ALRQ+SFRLAA DDQF ++AK RA R +WARVAE++ P G A HA TS MM++RD Sbjct 239 AALRQVSFRLAATDDQFASIAKFRAGRLMWARVAELLDAPEAGGAPQHAVTSAAMMSRRD 298 Query 319 PWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEESH 378 PWVNMLR TLAAFGAGVGGA +V V PFD ++PGG T+ FA R+ARNTQLLLLEESH Sbjct 299 PWVNMLRTTLAAFGAGVGGATSVTVLPFDASVPGGLESTSRSFAERMARNTQLLLLEESH 358 Query 379 VGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAAR----R 434 +G V+DPAGGSW+VE LTD LA AW Q IEA GG V A + +G + E AR R Sbjct 359 LGHVVDPAGGSWYVESLTDSLADAAWSALQTIEAEGGLVAAIE--SGTVREAIARVREAR 416 Query 435 ADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPR 494 DIAHR ITGV+E+PNL E L RY FE LRDRSD HL TG+RP Sbjct 417 DTDIAHRTAPITGVSEFPNLAEQPLDASRRGGDAYRYGRAFEDLRDRSDAHLEATGSRPT 476 Query 495 VLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTD 554 VLL LGP AE R TF NLLA+GGIEA +PG +AG A A G +AV+CG D Sbjct 477 VLLAGLGPQAETTPRVTFVANLLAAGGIEARNPGVTEAGQY--AAAREGE-DIAVLCGAD 533 Query 555 ARYRDEVADIVQAARAAGVSRVYLAGPEKAL-GDAAHRPDEFLTAKINVVQALSNLLTRL 613 RY E V+A R AGVS VYLAG EK DA RPD +L I+ V AL+ LL +L Sbjct 534 KRYATEGEGAVRALRDAGVSTVYLAGAEKGFPADATDRPDGYLALGIDAVAALTTLLDQL 593 Query 614 G 614 G Sbjct 594 G 594 >gi|237785521|ref|YP_002906226.1| methylmalonyl-CoA mutase small subunit [Corynebacterium kroppenstedtii DSM 44385] gi|237758433|gb|ACR17683.1| methylmalonyl-CoA mutase, small subunit [Corynebacterium kroppenstedtii DSM 44385] Length=620 Score = 456 bits (1173), Expect = 5e-126, Method: Compositional matrix adjust. Identities = 268/619 (44%), Positives = 365/619 (59%), Gaps = 28/619 (4%) Query 14 VRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQ 73 ++ W AVA V +++ + D + + D + L T DG ++ LY D+ PEP PG+ Sbjct 13 LQHEWYRAVAKVFARTRKQDPSDVPDDVWKKLIKPTYDGIDVKPLYMRTDQGPEPSAPGE 72 Query 74 WPFVRGGDPLRDVHSGWKVAEAF--------PANGATA-DTNAAVLAALGEGVSALLIRV 124 +P+ RG L ++GW + E F A G +A D N +L AL G + L ++ Sbjct 73 FPYTRGAKLLEADNAGWGIREVFGPAVEVNATAGGQSAKDINKRILHALNVGTTVLELK- 131 Query 125 GESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGA 184 G+ P + +L+ VYL+LAP+ L P+ ++ A + L+ D + DLGA Sbjct 132 ---GIQPTDIPGVLNDVYLDLAPIAL-----ATPSKELGDAFLDFLETNGDDKTTADLGA 183 Query 185 DPLTASLRDRPAPPIEEVVAVASRAAGERG-LRAITVDGPAFHNLGATAATELAATVAAA 243 PLT+ + ++ +A A +A+ G + AITV+G + N GAT + E+ +AA Sbjct 184 SPLTSGFDSSQSVDLDTAIAWAKKASELPGAVHAITVNGVSLSNQGATDSQEIGLVLAAT 243 Query 244 VAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAA 303 + YLR LT++GL V DA+ QIS RLAA DD F T+ K RALR L ARV EV+G Sbjct 244 LEYLRKLTDAGLSVEDAVDQISIRLAATDDFFSTICKFRALRSLLARVWEVLGIVDHPLP 303 Query 304 VVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFAR 363 +HAET+ M QRDP+ N+LRCT+A+F AGVGGA +VLVHPFD AI G PG FA Sbjct 304 AIHAETAPVMFAQRDPYTNILRCTIASFAAGVGGATSVLVHPFDYAIKNGLPGARRSFAH 363 Query 364 RIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDF- 422 RIARN LLLLEESH+G V DPAGGS++ E TD+L +AW +E++ GF+ D Sbjct 364 RIARNINLLLLEESHLGFVADPAGGSYYAEFFTDQLEEKAWGVLTDVESKDGFIAETDNG 423 Query 423 -LAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPG---DPTSPVRRYAAGFEAL 478 + + E +R DDIAHRR +T +NE+PNL E L +PT VRR+ A FEAL Sbjct 424 DIQKLLDESYEKRRDDIAHRRTKVTAINEFPNLAEKPLAADLRIEPTG-VRRWGADFEAL 482 Query 479 RDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNA 538 R+RSD + + RP + L PLGPLA+HNIRT F TNLLASGGI+A +PG V A Sbjct 483 RNRSDAYFEKEEKRPVIKLAPLGPLAKHNIRTGFTTNLLASGGIQADNPGQVTPDDENFA 542 Query 539 VADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALG--DAAHRPDEFL 596 +P + V+CGTDA Y + + A RAAGV +V LAG KA+ D + +PD++L Sbjct 543 TQFKDAP-IVVVCGTDAEYAENAGSAIDALRAAGVKKVLLAGAPKAVENLDDSSKPDDYL 601 Query 597 TAKINVVQALSNLLTRLGA 615 KI+ V LS LL LGA Sbjct 602 NMKIDAVSTLSGLLDELGA 620 >gi|262202346|ref|YP_003273554.1| methylmalonyl-CoA mutase [Gordonia bronchialis DSM 43247] gi|262085693|gb|ACY21661.1| Methylmalonyl-CoA mutase [Gordonia bronchialis DSM 43247] Length=652 Score = 449 bits (1156), Expect = 6e-124, Method: Compositional matrix adjust. Identities = 307/630 (49%), Positives = 386/630 (62%), Gaps = 36/630 (5%) Query 11 LEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPL 70 L++ W A A VL+KS R +L + LL T T DG IR LYT DE EP L Sbjct 18 LDEAYQAWSQAAAAVLAKSRRVAVEELPADADTLLSTTTPDGLTIRPLYTRRDETAEPGL 77 Query 71 PGQWPFVRGGDPLRDVHSGWKVAEAF-----PANGATADTNAAVLAALGEGVSALLIRVG 125 PG++PFVRG DP RDV GW+V E F PA G N ++L A+ G S L + V Sbjct 78 PGRFPFVRGSDPRRDVTVGWRVTERFGDDDTPAKG----VNESILEAMANGTSGLWLSVR 133 Query 126 E---SGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLAL------VAQLDPGQRD 176 + SG++ L L+GVYL+L PV LDAG A +L L Q P Sbjct 134 DGDGSGLSTADLGTALAGVYLDLVPVTLDAGEYAVEAARELLRLRTEAAKAPQAAPVTAG 193 Query 177 TLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGE--RGLRAITVDGPAFHNLGATAAT 234 T + G PLTA+ R + VA+A+ G+ G+R V+G F GA Sbjct 194 T-THSFGLSPLTAAFSGRATVDADAAVALAT---GDLPAGVRTFRVEGGDFATAGADNGL 249 Query 235 ELAATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEV 294 ELA VAAAV +LR LT +GL + AL QI+F ++ADDDQF T+AK+RALR+LW+RVA+V Sbjct 250 ELALVVAAAVTHLRDLTAAGLSAAAALEQITFGVSADDDQFATIAKLRALRKLWSRVADV 309 Query 295 VGDPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGF 354 +G G A+ HA T L M +QRDPWVNMLR T+AAFGAGVGGAD V V +D A+P Sbjct 310 LGARESGGALTHAVTDLSMFSQRDPWVNMLRSTIAAFGAGVGGADQVTVLGYDAALPADL 369 Query 355 PGTAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARG 414 ++A F+RRIARNTQLLLLEES++GRVLDP GGSWF+E LTD LA AW F IEA G Sbjct 370 RTSSATFSRRIARNTQLLLLEESNLGRVLDPGGGSWFIESLTDDLAANAWTVFTQIEAAG 429 Query 415 GFVEAHD--FLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDP-------- 464 G+ A + ++A ++ A R ++AHRR ++TGVNE+PNL E +L G Sbjct 430 GYRSALESGWIADRVGASLATRDVEVAHRRTSVTGVNEFPNLTERSLGAGASEAADGLVT 489 Query 465 -TSPVRRYAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIE 523 T + R FEALRDRSD LA GARP +LLLPLG +AEHN RTTF NLLASGGIE Sbjct 490 GTPRLARVGRAFEALRDRSDVSLAERGARPSILLLPLGSVAEHNARTTFVANLLASGGIE 549 Query 524 AIDPGTVDAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEK 583 A++PG + A T+ AV A + S+AV+CGT RY D+ + AARAAG+ RV LAGP+K Sbjct 550 AVNPGPLTADTIAEAVGGAAT-SIAVLCGTKQRYADDGPAALAAARAAGLDRVLLAGPDK 608 Query 584 ALGDAAHRPDEFLTAKINVVQALSNLLTRL 613 D A RPD L I+ V L++LL +L Sbjct 609 EWPDGADRPDGSLRVGIDAVATLTDLLDQL 638 >gi|25028207|ref|NP_738261.1| putative methylmalonyl-CoA mutase small subunit [Corynebacterium efficiens YS-314] gi|23493491|dbj|BAC18461.1| putative methylmalonyl-CoA mutase small subunit [Corynebacterium efficiens YS-314] Length=624 Score = 444 bits (1141), Expect = 3e-122, Method: Compositional matrix adjust. Identities = 279/606 (47%), Positives = 361/606 (60%), Gaps = 15/606 (2%) Query 18 WRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDE--LPEPPLPGQWP 75 WR AV GV ++ ++ D + + R L T DG I LYT DE P LPG++P Sbjct 26 WRKAVVGVFARVSKKDVSDVPSDVWRRLIVTTNDGLDISPLYTRADENGAPIDELPGEFP 85 Query 76 FVRGGDPLRDVHSGWKVAEAFPA-NGATADTNAAVLAALGEGVSAL-LIRVGESGVAPDR 133 F RG D +GW V E F + + A ++ N +L AL G + L L G+ G P+ Sbjct 86 FTRGAAIDAD-RAGWGVTETFGSYDDAVSEVNRQILHALNSGTTTLRLDLTGQLG--PED 142 Query 134 LTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRD 193 L A L GVYLN+AP+IL AGA A D + ALV D T ++ LGA PLT+++ Sbjct 143 LKAALEGVYLNMAPIILSAGARTTEAADALYALV---DAAGTGTAAVTLGASPLTSAVDG 199 Query 194 RPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTES 253 + ++ V +A A+ +RA+ VD +F N A+ A E+A +AA + Y+R L ++ Sbjct 200 SGSVDLDATVELARAASARENVRAVLVDAVSFSNQDASDAQEIALALAAGIDYVRALVDA 259 Query 254 GLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPM 313 GL AL QI+FR A DDQF + K+R R+LWARVAEV+G P GAA H T+ M Sbjct 260 GLSTGQALDQIAFRFAVTDDQFGQIVKLRTARRLWARVAEVLGHPDLGAAPQHTVTAPVM 319 Query 314 MTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLL 373 +QRDPWVNMLR T+AAF AGVGGA V V FD AI GG PGT FA RIARNT LLL Sbjct 320 FSQRDPWVNMLRSTVAAFAAGVGGATDVEVLTFDAAIDGGNPGTTRNFAHRIARNTNLLL 379 Query 374 LEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDF--LAGQIAECA 431 LEESH+G V+DPAGGS++VE LT+ L+ +AW F IEA+GG+ D +A + E Sbjct 380 LEESHLGHVIDPAGGSYYVESLTNDLSGKAWALFADIEAKGGYRAQLDNGAIAAALDEMH 439 Query 432 ARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP--VRRYAAGFEALRDRSDHHLART 489 IA R+ +TG+NE+PNL E LP P +RR+AA FEALR+RSD L Sbjct 440 ETTRQQIAKRQKQLTGINEFPNLAEAPLPAEKRQEPAGIRRWAAEFEALRNRSDAFLEAN 499 Query 490 GARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAV 549 GARP + L+P+GPLA+HNIRT F TNLLASGGI +PG + GT A GS + V Sbjct 500 GARPTIGLIPVGPLAKHNIRTGFTTNLLASGGIAVTNPGELTPGTPEFDEAATGS-DIVV 558 Query 550 ICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNL 609 ICGTD Y +V+ RAAG ++ LAG + +A H PD +L KI+ L+ L Sbjct 559 ICGTDQEYAATGEQVVEKLRAAGAKQILLAGAPASFENAQHAPDGYLNMKIDAASTLATL 618 Query 610 LTRLGA 615 L LGA Sbjct 619 LDGLGA 624 >gi|145295661|ref|YP_001138482.1| hypothetical protein cgR_1588 [Corynebacterium glutamicum R] gi|140845581|dbj|BAF54580.1| hypothetical protein [Corynebacterium glutamicum R] Length=616 Score = 443 bits (1140), Expect = 4e-122, Method: Compositional matrix adjust. Identities = 277/617 (45%), Positives = 367/617 (60%), Gaps = 15/617 (2%) Query 5 VPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDE 64 VPE +L + W AVAGV +++ + D + + L T DG I LYT DE Sbjct 9 VPE--ELSENLETWYKAVAGVFARTQKKDIGDIAVDVWKKLIVTTPDGVDINPLYTRADE 66 Query 65 LPEP--PLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLI 122 +PG++PF RG + GW V E F + + + NAAVL AL G + L Sbjct 67 SQRKFTEVPGEFPFTRG-TTVDGERVGWGVTETF-GHDSPKNINAAVLHALNSGTTTLGF 124 Query 123 RVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDL 182 E A D L L GVYLN+AP+++ AG +V AL A + ++ L Sbjct 125 EFSEEFTAAD-LKVALEGVYLNMAPLLIHAGGS---TSEVAAALYALAEEAGTPFAALTL 180 Query 183 GADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAA 242 G+ PLTA + + IEE V +A A+ +RAI VDG +F N GA+ A E+ ++AA Sbjct 181 GSRPLTAQVDGSHSDTIEEAVQLAVNASKRANVRAILVDGSSFSNQGASDAQEIGLSIAA 240 Query 243 AVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGA 302 V Y+R L ++GL + AL+Q++FR A D+QF ++K+R R+LWARV EV+G P Sbjct 241 GVDYVRRLVDAGLSMEAALKQVAFRFAVTDEQFAQISKLRVARRLWARVCEVLGFPELAV 300 Query 303 AVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFA 362 A HA T+ M +QRDPWVNMLR T+AAF AGVGGA V V FD AIPGG PG + FA Sbjct 301 APQHAVTARAMFSQRDPWVNMLRSTVAAFAAGVGGATDVEVRTFDDAIPGGVPGVSRNFA 360 Query 363 RRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVE--AH 420 RIARNT LLLLEESH+G V+DPAGGS+FVE TD LA +AW F IEA GG+ A Sbjct 361 HRIARNTNLLLLEESHLGHVVDPAGGSYFVESFTDDLAEKAWAVFSGIEAEGGYSAACAS 420 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP--VRRYAAGFEAL 478 + + + + D+A R+ +TG+NE+PNL E LP P VRR+AA FEAL Sbjct 421 GTVTAMLDQTWEQTRADVASRKKKLTGINEFPNLAESPLPADRRVEPAGVRRWAADFEAL 480 Query 479 RDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNA 538 R+RSD L + GARP++ ++PLGPL++HNIRT F +NLLASGGIEAI+PG + GT A Sbjct 481 RNRSDAFLEKNGARPQITMIPLGPLSKHNIRTGFTSNLLASGGIEAINPGQLVPGTDSFA 540 Query 539 VADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTA 598 A A + + V+CGTD Y + V+ R AGV R+ LAG K+ +AH PD +L Sbjct 541 EA-AQAAGIVVVCGTDQEYAETGEGAVEKLREAGVERILLAGAPKSFEGSAHAPDGYLNM 599 Query 599 KINVVQALSNLLTRLGA 615 I+ L++LL LGA Sbjct 600 TIDAAATLADLLDALGA 616 >gi|344045015|gb|EGV40689.1| hypothetical protein CgS9114_06815 [Corynebacterium glutamicum S9114] Length=616 Score = 441 bits (1134), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 276/617 (45%), Positives = 365/617 (60%), Gaps = 15/617 (2%) Query 5 VPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDE 64 VPE +L + W AVAGV +++ + D + + L T DG I LYT DE Sbjct 9 VPE--ELSENLETWYKAVAGVFARTQKKDIGDIAVDVWKKLIITTPDGVDINPLYTRADE 66 Query 65 LPEP--PLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLI 122 +PG++PF RG + GW V E F + + + NAAVL AL G + L Sbjct 67 SQRKFTEVPGEFPFTRG-TTVDGERVGWGVTETF-GHDSPKNINAAVLHALNSGTTTLGF 124 Query 123 RVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDL 182 E A D L L GVYLN+AP+++ AG +V AL A + ++ L Sbjct 125 EFSEEFTAAD-LKVALEGVYLNMAPLLIHAGGS---TSEVAAALYALAEETGTPFAALTL 180 Query 183 GADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAA 242 G+ PLTA + + IEE V +A A+ +RAI VDG +F N GA+ A E+ ++AA Sbjct 181 GSRPLTAQVDGSHSDTIEEAVQLAVNASKRANVRAILVDGSSFSNQGASDAQEIGLSIAA 240 Query 243 AVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGA 302 V Y+R L ++GL AL+Q++FR A D+QF ++K+R R+LWARV EV+G P Sbjct 241 GVDYVRRLVDAGLSTEAALKQVAFRFAVTDEQFAQISKLRVARRLWARVCEVLGFPELAV 300 Query 303 AVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFA 362 A HA T+ M +QRDPWVNMLR T+AAF AGVGGA V V FD AIPGG PG + F Sbjct 301 APQHAVTARAMFSQRDPWVNMLRSTVAAFAAGVGGATDVEVRTFDDAIPGGVPGVSRNFT 360 Query 363 RRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVE--AH 420 RIARNT LLLLEESH+G V+DPAGGS+FVE TD LA +AW F IEA GG+ A Sbjct 361 HRIARNTNLLLLEESHLGHVVDPAGGSYFVESFTDDLAEKAWAVFSGIEAEGGYSAACAS 420 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP--VRRYAAGFEAL 478 + + + + D+A R+ +TG+NE+PNL E LP P VRR+AA FEAL Sbjct 421 GTVTAMLDQTWEQTRADVASRKKKLTGINEFPNLAESPLPADRRVEPAGVRRWAADFEAL 480 Query 479 RDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNA 538 R+RSD L + GARP++ ++PLGPL++HNIRT F +NLLASGGIEAI+PG + GT A Sbjct 481 RNRSDAFLEKNGARPQITMIPLGPLSKHNIRTGFTSNLLASGGIEAINPGQLVPGTDSFA 540 Query 539 VADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTA 598 A A + + V+CGTD Y + V+ R AGV R+ LAG K+ +AH PD +L Sbjct 541 EA-AQAAGIVVVCGTDQEYAETGEGAVEKLREAGVERILLAGAPKSFEGSAHAPDGYLNM 599 Query 599 KINVVQALSNLLTRLGA 615 I+ L++LL LGA Sbjct 600 TIDAAATLADLLDALGA 616 >gi|19552743|ref|NP_600745.1| methylmalonyl-CoA mutase N-terminal domain-containing protein [Corynebacterium glutamicum ATCC 13032] gi|62390412|ref|YP_225814.1| methylmalonyl-COA mutase small subunit [Corynebacterium glutamicum ATCC 13032] gi|21324298|dbj|BAB98923.1| Methylmalonyl-CoA mutase, N-terminal domain/subunit [Corynebacterium glutamicum ATCC 13032] gi|41325749|emb|CAF21538.1| METHYLMALONYL-COA MUTASE SMALL SUBUNIT [Corynebacterium glutamicum ATCC 13032] Length=616 Score = 441 bits (1133), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 273/617 (45%), Positives = 362/617 (59%), Gaps = 15/617 (2%) Query 5 VPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDE 64 VPE +L + W AVAGV +++ + D + + L T DG I LYT DE Sbjct 9 VPE--ELSENLETWYKAVAGVFARTQKKDIGDIAVDVWKKLIVTTPDGVDINPLYTRADE 66 Query 65 LPEP--PLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLI 122 +PG++PF RG + GW V E F + + + NAAVL AL G + L Sbjct 67 SQRKFTEVPGEFPFTRG-TTVDGERVGWGVTETF-GHDSPKNINAAVLNALNSGTTTLGF 124 Query 123 RVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDL 182 E A D L L GVYLN+AP+++ AG +V AL + ++ L Sbjct 125 EFSEEFTAAD-LKVALEGVYLNMAPLLIHAGGS---TSEVAAALYTLAEEAGTFFAALTL 180 Query 183 GADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAA 242 G+ PLTA + + IEE V +A A+ +RAI VDG +F N GA+ A E+ ++AA Sbjct 181 GSRPLTAQVDGSHSDTIEEAVQLAVNASKRANVRAILVDGSSFSNQGASDAQEIGLSIAA 240 Query 243 AVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGA 302 V Y+R L ++GL AL+Q++FR A D+QF ++K+R R+LWARV EV+G P Sbjct 241 GVDYVRRLVDAGLSTEAALKQVAFRFAVTDEQFAQISKLRVARRLWARVCEVLGFPELAV 300 Query 303 AVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFA 362 A HA T+ M +QRDPWVNMLR T+AAF AGVGGA V V FD AIP G PG + FA Sbjct 301 APQHAVTARAMFSQRDPWVNMLRSTVAAFAAGVGGATDVEVRTFDDAIPDGVPGVSRNFA 360 Query 363 RRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVE--AH 420 RIARNT LLLLEESH+G V+DPAGGS+FVE TD LA +AW F IEA GG+ A Sbjct 361 HRIARNTNLLLLEESHLGHVVDPAGGSYFVESFTDDLAEKAWAVFSGIEAEGGYSAACAS 420 Query 421 DFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP--VRRYAAGFEAL 478 + + + + D+A R+ +TG+NE+PNL E LP P VRR+AA FEAL Sbjct 421 GTVTAMLDQTWEQTRADVASRKKKLTGINEFPNLAESPLPADRRVEPAGVRRWAADFEAL 480 Query 479 RDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNA 538 R+RSD L + GARP++ ++PLGPL++HNIRT F +NLLASGGIEAI+PG + GT Sbjct 481 RNRSDAFLEKNGARPQITMIPLGPLSKHNIRTGFTSNLLASGGIEAINPGQLVPGT-DAF 539 Query 539 VADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTA 598 A + + V+CGTD Y + V+ R AGV R+ LAG K+ +AH PD +L Sbjct 540 AEAAQAAGIVVVCGTDQEYAETGEGAVEKLREAGVERILLAGAPKSFEGSAHAPDGYLNM 599 Query 599 KINVVQALSNLLTRLGA 615 I+ L++LL LGA Sbjct 600 TIDAAATLADLLDALGA 616 >gi|307084071|ref|ZP_07493184.1| hypothetical protein TMLG_00478 [Mycobacterium tuberculosis SUMu012] gi|308366260|gb|EFP55111.1| hypothetical protein TMLG_00478 [Mycobacterium tuberculosis SUMu012] Length=221 Score = 438 bits (1127), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 221/221 (100%), Positives = 221/221 (100%), Gaps = 0/221 (0%) Query 395 LTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNL 454 LTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNL Sbjct 1 LTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNL 60 Query 455 GEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFAT 514 GEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFAT Sbjct 61 GEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFAT 120 Query 515 NLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVS 574 NLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVS Sbjct 121 NLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVS 180 Query 575 RVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLGA 615 RVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLGA Sbjct 181 RVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLGA 221 >gi|225021418|ref|ZP_03710610.1| hypothetical protein CORMATOL_01437 [Corynebacterium matruchotii ATCC 33806] gi|224945800|gb|EEG27009.1| hypothetical protein CORMATOL_01437 [Corynebacterium matruchotii ATCC 33806] Length=598 Score = 435 bits (1119), Expect = 1e-119, Method: Compositional matrix adjust. Identities = 292/606 (49%), Positives = 363/606 (60%), Gaps = 30/606 (4%) Query 18 WRNAVAGVLSKSNRTDSAQLG-DHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPF 76 W AVAGV ++ + D A + D ++L+ T T DG I LY DEL E LPG +P+ Sbjct 15 WYKAVAGVFARVQKKDVADIPLDIWQKLIKT-TYDGIPINPLYNRADELEEAALPGVFPY 73 Query 77 VRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVAPDRLTA 136 RG + + GW VAE+F TN VL +L G + L+I+ G + +A Sbjct 74 RRGAAGVGQENQGWGVAESFDEKS----TNQQVLDSLYNGTTNLVIQ-GSADIA-----T 123 Query 137 LLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDRPA 196 LLSGVYL+L PV L AG + AL A D Q I+LGA PLT+ + Sbjct 124 LLSGVYLSLCPVRLFAGVR---TVEQAKALFAVADSQQETPQLIELGATPLTSMVNGGAT 180 Query 197 PPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTESGLV 256 +++ + +A +AA RAI VD F N GAT A E+ +AA V YLR LT++G Sbjct 181 ISLDDTIELAKQAAQRDNTRAILVDAVTFSNQGATDAEEIGLALAAGVEYLRALTDAGFT 240 Query 257 VSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQ 316 V AL QISFR A D+QF +AK RA RQLWARVAE+VG P G HA T+ M TQ Sbjct 241 VEQALDQISFRFATTDEQFAQIAKFRAARQLWARVAEIVGAPEHGTCPQHALTAPVMFTQ 300 Query 317 RDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEE 376 RDPWVNMLR T+AAF AGVGGA V V PFD AIPGG P T+ FARRIARNT LLLLEE Sbjct 301 RDPWVNMLRSTVAAFAAGVGGATDVEVLPFDWAIPGGLPKTSRSFARRIARNTNLLLLEE 360 Query 377 SHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAEC-----A 431 SH+ V+DP GGS+F+E T +LA +AW+ F ++EA GG +A AG +A+ Sbjct 361 SHLSHVIDPGGGSYFIEAFTTQLADKAWEVFTSVEAEGGLQQA--IAAGTVAKLLDDAHE 418 Query 432 ARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP--VRRYAAGFEALRDRSDHHLART 489 A+R DIA R IT +NE+PNL E LP P VRR+AA FEALR+RSD ++ Sbjct 419 AQR-KDIARRIKKITAINEFPNLAEAPLPADLRVEPSRVRRWAAEFEALRNRSDAYMEVR 477 Query 490 GARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAV 549 G RP +L+PLGPLA+HNIRT FATNLLASGGIEA++PG V GT A +P +AV Sbjct 478 GTRPTAVLIPLGPLAKHNIRTGFATNLLASGGIEALNPGQVTPGTEEFTTAAKSAP-IAV 536 Query 550 ICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNL 609 ICGTD Y D +A RAAGV + LAG PD +L KI+ L+ L Sbjct 537 ICGTDQEYDATGKDAYEALRAAGVDTILLAGSP----GHEFEPDGYLNMKIDAAATLAEL 592 Query 610 LTRLGA 615 LT+LGA Sbjct 593 LTKLGA 598 >gi|305681235|ref|ZP_07404042.1| putative methylmalonyl-CoA mutase, small subunit [Corynebacterium matruchotii ATCC 14266] gi|305659440|gb|EFM48940.1| putative methylmalonyl-CoA mutase, small subunit [Corynebacterium matruchotii ATCC 14266] Length=598 Score = 433 bits (1113), Expect = 6e-119, Method: Compositional matrix adjust. Identities = 290/606 (48%), Positives = 363/606 (60%), Gaps = 30/606 (4%) Query 18 WRNAVAGVLSKSNRTDSAQLG-DHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPF 76 W AVAGV ++ + D A + D ++L+ T T DG I LY DEL E LPG +P+ Sbjct 15 WYKAVAGVFARVQKKDVADIPLDIWQKLIKT-TYDGIPINPLYNRADELEEAALPGVFPY 73 Query 77 VRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVAPDRLTA 136 RG + + GW VAE+F TN VL +L G + L+I+ G + +A Sbjct 74 RRGAAGVGQENQGWGVAESFDEKS----TNQQVLDSLYNGTTNLVIQ-GSADIA-----T 123 Query 137 LLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDRPA 196 LL+GVYL+L PV L AG + AL A D Q I+LGA PLT+ + Sbjct 124 LLNGVYLSLCPVRLFAGVR---TVEQAKALFAVADSQQETPQLIELGATPLTSMVNGGAT 180 Query 197 PPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTESGLV 256 +++ + +A +AA RAI VD F N GAT A E+ +AA V YLR LT++G Sbjct 181 ISLDDTIELAKQAAQRDNTRAILVDAVTFSNQGATDAEEIGLALAAGVEYLRALTDAGFT 240 Query 257 VSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQ 316 + AL QISFR A D+QF +AK RA RQLWARVAE+VG P G HA T+ M TQ Sbjct 241 IEQALDQISFRFATTDEQFAQIAKFRAARQLWARVAEIVGAPEHGTCPQHALTAPVMFTQ 300 Query 317 RDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEE 376 RDPWVNMLR T+AAF AGVGGA V V PFD AIPGG P T+ FARRIARNT LLLLEE Sbjct 301 RDPWVNMLRSTVAAFAAGVGGATDVEVLPFDWAIPGGLPKTSRSFARRIARNTNLLLLEE 360 Query 377 SHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAEC-----A 431 SH+ V+DP GGS+F+E T +LA +AW+ F ++EA GG +A AG +A+ Sbjct 361 SHLSHVIDPGGGSYFIEAFTTQLADKAWEVFTSVEAEGGLQQA--IAAGTVAKLLDDAHE 418 Query 432 ARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP--VRRYAAGFEALRDRSDHHLART 489 A+R DIA R IT +NE+PNL E LP P VRR+AA FEALR+RSD ++ Sbjct 419 AQR-KDIARRIKKITAINEFPNLAEAPLPADLRVEPSRVRRWAAEFEALRNRSDAYMEVR 477 Query 490 GARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAV 549 G RP +L+PLGPLA+HNIRT FATNLLASGGIEA++PG V GT A +P +AV Sbjct 478 GTRPAAVLIPLGPLAKHNIRTGFATNLLASGGIEALNPGQVTPGTEEFTTAAKSAP-IAV 536 Query 550 ICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNL 609 ICGTD Y D +A RAAGV + LAG PD +L KI+ L+ L Sbjct 537 ICGTDQEYDATGKDAYEALRAAGVDTILLAGSP----GHEFEPDGYLNMKIDAAATLAEL 592 Query 610 LTRLGA 615 LT+LGA Sbjct 593 LTKLGA 598 >gi|296139812|ref|YP_003647055.1| methylmalonyl-CoA mutase [Tsukamurella paurometabola DSM 20162] gi|296027946|gb|ADG78716.1| Methylmalonyl-CoA mutase [Tsukamurella paurometabola DSM 20162] Length=597 Score = 425 bits (1093), Expect = 1e-116, Method: Compositional matrix adjust. Identities = 289/612 (48%), Positives = 368/612 (61%), Gaps = 37/612 (6%) Query 18 WRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTA----DGFAIRALYTAFDELPEPPLPGQ 73 WR +V VL+KS + G PE + T T DG I LY+ DE PE LPG Sbjct 9 WRASVGAVLAKS------RGGTPPEDPIATLTTPTEDDGVLIAPLYSRRDERPEALLPGV 62 Query 74 WPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVAPDR 133 +P+ RGG P DV GW+VAE F AD VL AL G SAL + + G Sbjct 63 YPYTRGGSPTPDVRLGWRVAEVFGPETDAAD----VLGALESGASALWLTRPDPG----- 113 Query 134 LTALLSGVYLNLAPVILDAGADYRPACDVMLALV---AQLDPGQRDTLSIDLGADPLTAS 190 LL GVY ++AP+++ AG+ R A + +LA + AQ D + D + + LGA PLT++ Sbjct 114 --PLLEGVYPDMAPILVTAGSQARRAAEQVLAKLDAAAQSDQYRPDLVRVSLGAAPLTSA 171 Query 191 LRDRPAPPIEEVVAVASRAA-GERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRV 249 + R +E + +A A +RA+ VDG HN GAT A EL AA + ++R Sbjct 172 VVGRSDVSDDEAIELARIAVIRTEDVRALVVDGADLHNAGATCAQELGLAAAAGLDHVRA 231 Query 250 LTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAET 309 L +G + +L Q++FRLAA DDQF+TLAK+RA R +WARVAE +G PG G A VHA T Sbjct 232 LVAAGFDTASSLDQLTFRLAATDDQFLTLAKIRAWRTVWARVAECLGHPGAGNAPVHAVT 291 Query 310 SLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNT 369 SL TQRDPWVNMLR T+AAFGAGVGGAD V +D A+PGG G +AGF+RRIARNT Sbjct 292 SLAATTQRDPWVNMLRGTVAAFGAGVGGADYVTTLGYDAALPGGVEGYSAGFSRRIARNT 351 Query 370 QLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVE--AHDFLAGQI 427 QLLLLEES++GRV DP GSW VE LTD +AR AW QA+E GGF + + +AG+I Sbjct 352 QLLLLEESNLGRVADPGAGSWHVESLTDDVARAAWAELQAVERAGGFTAGVSDESIAGRI 411 Query 428 AECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTS-PV-RRYAAGFEALRDRSDHH 485 E A RR ++ R ITGVNE+PNL E + P T+ PV R YAA F+ALR RSD Sbjct 412 GEAAERRDAAVSRRARKITGVNEFPNLAEAPIAPSAATNGPVLRSYAAPFDALRTRSDSF 471 Query 486 LARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSP 545 L G RPR+ ++ +G +A HN R+TF TNLLASGGIEA+ D G A D GSP Sbjct 472 LREHGVRPRIRMVTIGSVAAHNARSTFVTNLLASGGIEAVL--DADEQRAGTATVD-GSP 528 Query 546 --SVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVV 603 + V+ G+DA Y +E + ++ R G V LAG +GD D +L AKI+ Sbjct 529 GAQIVVLAGSDAGYAEEGETLARSLREQGY-LVLLAGAPGTVGDGLI--DFYLHAKIDAA 585 Query 604 QALSNLLTRLGA 615 L +LLTRLGA Sbjct 586 AVLDDLLTRLGA 597 >gi|300858488|ref|YP_003783471.1| methylmalonyl-CoA mutase small subunit [Corynebacterium pseudotuberculosis FRC41] gi|300685942|gb|ADK28864.1| methylmalonyl-CoA mutase small subunit [Corynebacterium pseudotuberculosis FRC41] gi|302206197|gb|ADL10539.1| Methylmalonyl-CoA mutase small subunit [Corynebacterium pseudotuberculosis C231] gi|302330756|gb|ADL20950.1| Methylmalonyl-CoA mutase small subunit [Corynebacterium pseudotuberculosis 1002] gi|308276439|gb|ADO26338.1| Methylmalonyl-CoA mutase small subunit [Corynebacterium pseudotuberculosis I19] gi|341824880|gb|AEK92401.1| Methylmalonyl-CoA mutase small subunit [Corynebacterium pseudotuberculosis PAT10] Length=603 Score = 425 bits (1093), Expect = 1e-116, Method: Compositional matrix adjust. Identities = 272/613 (45%), Positives = 355/613 (58%), Gaps = 27/613 (4%) Query 10 DLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPP 69 + E + W AVA V ++ + D + + R L T DG + LY DEL E Sbjct 11 EFEAQQQAWYKAVAKVFARVRKQDVSDIPLDIWRKLIRTTYDGINVNPLYNRVDELAEVA 70 Query 70 LPGQWPFVRGG-DPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESG 128 LPG +PF RG + GW V E+F G +A +N +L+AL G + ++I Sbjct 71 LPGVFPFTRGACGAGTEEGVGWGVTESF---GPSA-SNEQLLSALDNGTTDIVI------ 120 Query 129 VAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLT 188 D + LL GV APV L++G + + L+ D D I+LGA PL+ Sbjct 121 YGADNVEKLLKGVLFQYAPVRLNSGESTASVAEELYKLI---DAQDADPKLIELGASPLS 177 Query 189 ASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLR 248 + + + + V++A A + RAI VD +F N AT A E+ T+AA YLR Sbjct 178 SWVDGSASVDLSTAVSLAVDATKHKNTRAILVDAVSFSNQSATDAQEIGLTLAAGAQYLR 237 Query 249 VLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAE 308 LT +GL + DAL Q+SFR A DDQF ++K+RA R LWARVAE+VG G+A +HA Sbjct 238 ELTAAGLSIPDALDQLSFRYAVTDDQFAQISKLRAARTLWARVAEIVGAADHGSAPLHAL 297 Query 309 TSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARN 368 T+ M +QRDPWVNMLR T+AAF GVGGA V V FD AIPGG P + FA RIARN Sbjct 298 TAPVMFSQRDPWVNMLRSTVAAFAGGVGGAHDVEVLCFDWAIPGGLPKISRPFAHRIARN 357 Query 369 TQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDF--LAGQ 426 T LLLLEESH+G V+DPAGGS++VE+LT +A +AW+ F IEA+GGF A + + Sbjct 358 TNLLLLEESHLGHVIDPAGGSYYVEKLTSEIAEKAWKVFTEIEAQGGFTAAFESGAITSM 417 Query 427 IAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSP--VRRYAAGFEALRDRSDH 484 + E + +DIAHR +T +NE+PNL E LP P VRR+ A FEALR+RSD Sbjct 418 LDESHEKIRNDIAHRTKKVTAINEFPNLAEAPLPADLRVEPTHVRRWGAQFEALRNRSDA 477 Query 485 HLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGS 544 + G RP L+PLGPLA+HNIRT F TNLL +GGIEA++PG V GT A A S Sbjct 478 FMEVHGKRPAAALIPLGPLAKHNIRTGFITNLLGAGGIEALNPGQVTPGTPEFEQA-ARS 536 Query 545 PSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAH--RPDEFLTAKINV 602 S+AVICGTDA Y A+ A R AGV + LA G H PD++L KI+ Sbjct 537 ASIAVICGTDAEYDASGAEAFDALRKAGVETILLA------GSPGHDFEPDDYLNLKIDA 590 Query 603 VQALSNLLTRLGA 615 L++LL +LGA Sbjct 591 GATLTDLLDKLGA 603 Lambda K H 0.319 0.135 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1405287662240 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40