BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1495
Length=105
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608633|ref|NP_216011.1| hypothetical protein Rv1495 [Mycoba... 212 2e-53
gi|289753579|ref|ZP_06512957.1| conserved hypothetical protein [... 211 3e-53
gi|344219327|gb|AEM99957.1| hypothetical protein MTCTRI2_1534 [M... 209 1e-52
gi|94962360|gb|ABF48487.1| PemK-like protein [Rhodococcus erythr... 98.2 4e-19
gi|311898238|dbj|BAJ30646.1| hypothetical protein KSE_48680 [Kit... 84.0 7e-15
gi|297561017|ref|YP_003679991.1| transcriptional modulator of Ma... 71.6 4e-11
gi|268610923|ref|ZP_06144650.1| transcriptional modulator of Maz... 59.7 1e-07
gi|332654152|ref|ZP_08419896.1| toxin-antitoxin system, toxin co... 56.2 2e-06
gi|167750636|ref|ZP_02422763.1| hypothetical protein EUBSIR_0161... 55.1 3e-06
gi|266622458|ref|ZP_06115393.1| toxin-antitoxin system, toxin co... 55.1 3e-06
gi|336428257|ref|ZP_08608241.1| hypothetical protein HMPREF0994_... 55.1 3e-06
gi|158321295|ref|YP_001513802.1| transcriptional modulator of Ma... 54.7 5e-06
gi|291557223|emb|CBL34340.1| Growth inhibitor [Eubacterium sirae... 54.3 5e-06
gi|325678361|ref|ZP_08157981.1| toxin-antitoxin system, toxin co... 53.9 7e-06
gi|169335269|ref|ZP_02862462.1| hypothetical protein ANASTE_0167... 53.9 7e-06
gi|225017211|ref|ZP_03706403.1| hypothetical protein CLOSTMETH_0... 53.9 9e-06
gi|194467668|ref|ZP_03073655.1| transcriptional modulator of Maz... 53.5 9e-06
gi|291543394|emb|CBL16503.1| Growth inhibitor [Ruminococcus sp. ... 53.1 1e-05
gi|291542825|emb|CBL15935.1| Growth inhibitor [Ruminococcus brom... 53.1 1e-05
gi|283795170|ref|ZP_06344323.1| toxin-antitoxin system, toxin co... 53.1 1e-05
gi|332800305|ref|YP_004461804.1| transcriptional modulator of Ma... 53.1 1e-05
gi|257440874|ref|ZP_05616629.1| toxin-antitoxin system, toxin co... 53.1 1e-05
gi|154500509|ref|ZP_02038547.1| hypothetical protein BACCAP_0418... 52.8 2e-05
gi|238922798|ref|YP_002936311.1| putative DNA-binding protein, P... 52.4 2e-05
gi|197303365|ref|ZP_03168404.1| hypothetical protein RUMLAC_0208... 52.0 3e-05
gi|295090171|emb|CBK76278.1| Growth inhibitor [Clostridium cf. s... 52.0 3e-05
gi|313114316|ref|ZP_07799851.1| toxin-antitoxin system, toxin co... 52.0 3e-05
gi|148543493|ref|YP_001270863.1| transcriptional modulator of Ma... 52.0 3e-05
gi|283797063|ref|ZP_06346216.1| toxin-antitoxin system, toxin co... 51.6 4e-05
gi|160933249|ref|ZP_02080638.1| hypothetical protein CLOLEP_0209... 51.2 5e-05
gi|317057317|ref|YP_004105784.1| transcriptional modulator of Ma... 51.2 5e-05
gi|160942568|ref|ZP_02089815.1| hypothetical protein FAEPRAM212_... 50.8 6e-05
gi|331085750|ref|ZP_08334833.1| hypothetical protein HMPREF0987_... 50.4 8e-05
gi|238924409|ref|YP_002937925.1| hypothetical protein EUBREC_205... 50.4 8e-05
gi|291541360|emb|CBL14471.1| Growth inhibitor [Roseburia intesti... 50.4 1e-04
gi|218133423|ref|ZP_03462227.1| hypothetical protein BACPEC_0128... 50.1 1e-04
gi|153814247|ref|ZP_01966915.1| hypothetical protein RUMTOR_0045... 50.1 1e-04
gi|291544268|emb|CBL17377.1| Growth inhibitor [Ruminococcus sp. ... 49.7 1e-04
gi|225405815|ref|ZP_03761004.1| hypothetical protein CLOSTASPAR_... 49.7 1e-04
gi|239628395|ref|ZP_04671426.1| growth inhibitor [Clostridiales ... 49.7 1e-04
gi|154504833|ref|ZP_02041571.1| hypothetical protein RUMGNA_0234... 49.3 2e-04
gi|302387502|ref|YP_003823324.1| transcriptional modulator of Ma... 49.3 2e-04
gi|339443703|ref|YP_004709707.1| hypothetical protein EGYY_00230... 48.9 2e-04
gi|125975181|ref|YP_001039091.1| transcriptional modulator of Ma... 48.5 3e-04
gi|153956427|ref|YP_001397192.1| transcriptional regulator [Clos... 48.5 3e-04
gi|295102084|emb|CBK99629.1| Growth inhibitor [Faecalibacterium ... 48.5 4e-04
gi|303242260|ref|ZP_07328747.1| transcriptional modulator of Maz... 48.1 4e-04
gi|160937462|ref|ZP_02084823.1| hypothetical protein CLOBOL_0235... 48.1 4e-04
gi|304385538|ref|ZP_07367882.1| PemK family transcriptional regu... 48.1 4e-04
gi|223986462|ref|ZP_03636464.1| hypothetical protein HOLDEFILI_0... 48.1 4e-04
>gi|15608633|ref|NP_216011.1| hypothetical protein Rv1495 [Mycobacterium tuberculosis H37Rv]
gi|15840958|ref|NP_335995.1| hypothetical protein MT1542 [Mycobacterium tuberculosis CDC1551]
gi|31792691|ref|NP_855184.1| hypothetical protein Mb1532 [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=105
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)
Query 1 VNAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPL 60
+NAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPL
Sbjct 1 MNAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPL 60
Query 61 TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGLPWP 105
TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGLPWP
Sbjct 61 TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGLPWP 105
>gi|289753579|ref|ZP_06512957.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289694166|gb|EFD61595.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=105
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/105 (99%), Positives = 104/105 (99%), Gaps = 0/105 (0%)
Query 1 VNAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPL 60
+NAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPL
Sbjct 1 MNAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPL 60
Query 61 TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGLPWP 105
TGYVNADNIET GKDELGDYLGEVTPATMNKINTALATALGLPWP
Sbjct 61 TGYVNADNIETFGKDELGDYLGEVTPATMNKINTALATALGLPWP 105
>gi|344219327|gb|AEM99957.1| hypothetical protein MTCTRI2_1534 [Mycobacterium tuberculosis
CTRI-2]
Length=105
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/105 (99%), Positives = 104/105 (99%), Gaps = 0/105 (0%)
Query 1 VNAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPL 60
+NAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPL
Sbjct 1 MNAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPL 60
Query 61 TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGLPWP 105
T YVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGLPWP
Sbjct 61 TRYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGLPWP 105
>gi|94962360|gb|ABF48487.1| PemK-like protein [Rhodococcus erythropolis]
Length=106
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 73/106 (69%), Gaps = 3/106 (2%)
Query 1 VNAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRT-IPTWVAMGPSDP 59
+ A LRGQ+Y D+G G KPW++VSNN RNR+ V+A R+TTT +T +PT V +G +DP
Sbjct 1 MTAALRGQIYWADIGKGEKPWVVVSNNVRNRNLNTVLAARVTTTPKTGVPTAVPLGAADP 60
Query 60 LTGYVNADNIETLGKDELGDY--LGEVTPATMNKINTALATALGLP 103
L G + AD++ L DE+ G ++PAT+ K+N ALA ALGLP
Sbjct 61 LVGSILADDLIQLFDDEIAASRPAGALSPATVVKLNKALAIALGLP 106
>gi|311898238|dbj|BAJ30646.1| hypothetical protein KSE_48680 [Kitasatospora setae KM-6054]
Length=106
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/92 (48%), Positives = 62/92 (68%), Gaps = 2/92 (2%)
Query 3 APLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTT-RRTIPTWVAMGPSD-PL 60
P+RG VYR D GYG KP+L+VSNNARN+ +AVRLTTT + +P+ V +GP++ L
Sbjct 5 VPVRGVVYRADAGYGLKPFLVVSNNARNQKLDSCLAVRLTTTPKPELPSIVKLGPAEGTL 64
Query 61 TGYVNADNIETLGKDELGDYLGEVTPATMNKI 92
G + D+I L +DEL + LG ++ TM K+
Sbjct 65 VGSILCDDIVVLYRDELRESLGALSTTTMVKV 96
>gi|297561017|ref|YP_003679991.1| transcriptional modulator of MazE/toxin, MazF [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296845465|gb|ADH67485.1| transcriptional modulator of MazE/toxin, MazF [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=106
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/101 (49%), Positives = 65/101 (65%), Gaps = 2/101 (1%)
Query 4 PLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTW-VAMGPSD-PLT 61
P+RG+VY D+G+G K W++VSNN RNR D +AVRLTTT RT T VA+GP+D P
Sbjct 6 PVRGRVYAADIGFGRKSWVVVSNNHRNRALGDCLAVRLTTTLRTPTTTVVALGPADRPFV 65
Query 62 GYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
G V D+I L ++L + G ++ ATM + L ALGL
Sbjct 66 GRVMCDDITLLDGEDLIEDQGALSFATMTCVANGLRAALGL 106
>gi|268610923|ref|ZP_06144650.1| transcriptional modulator of MazE/toxin, MazF [Ruminococcus flavefaciens
FD-1]
Length=115
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/109 (34%), Positives = 56/109 (52%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTTRRT--IPTWVAMGP 56
RG++Y DL G +P LIV N+ NRH+ V+A +T+ + +PT + +
Sbjct 5 RGEIYYADLSPVVGSEQGGVRPVLIVQNDVGNRHSPTVIAAAITSQKDKTHLPTHIEVEA 64
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
V + I TL K L D +GE+ +MNK+NTAL+ + GL
Sbjct 65 EKCGLAKDSIVLLEQIRTLDKRRLKDKMGELDLRSMNKVNTALSISFGL 113
>gi|332654152|ref|ZP_08419896.1| toxin-antitoxin system, toxin component, MazF family [Ruminococcaceae
bacterium D16]
gi|332517238|gb|EGJ46843.1| toxin-antitoxin system, toxin component, MazF family [Ruminococcaceae
bacterium D16]
Length=121
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (32%), Positives = 57/113 (51%), Gaps = 12/113 (10%)
Query 2 NAPLRGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLT--TTRRTIPTWV 52
N+ RG ++ DL G +P LIV N+ NRH+ V+A +T T + +PT +
Sbjct 3 NSVKRGDIFYADLSPVVGSEQGGVRPVLIVQNDTGNRHSPTVIAAAITSQTGKAKLPTHI 62
Query 53 ---AMGPSDPLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
A+ P V + I TL K L +++G+V M K++ A+A + GL
Sbjct 63 PLSALSCGLPKDSIVLLEQIRTLDKRRLREHMGKVDEKAMKKVDNAIAVSFGL 115
>gi|167750636|ref|ZP_02422763.1| hypothetical protein EUBSIR_01613 [Eubacterium siraeum DSM 15702]
gi|167656315|gb|EDS00445.1| hypothetical protein EUBSIR_01613 [Eubacterium siraeum DSM 15702]
gi|291558278|emb|CBL35395.1| Growth inhibitor [Eubacterium siraeum V10Sc8a]
Length=117
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (31%), Positives = 55/109 (51%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTTR--RTIPTWVAMGP 56
RG++Y DL G +P LIV N+ NRH+ V+A +T+ + +PT +++
Sbjct 5 RGEIYYADLSPVVGSEQGGMRPVLIVQNDVGNRHSPTVIAAAITSQKDKSRLPTHISINA 64
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
V + + TL K L + +GE+ MNK++ AL+ + GL
Sbjct 65 DRCGLAKDSIVLLEQVRTLDKQRLKERMGELDEGAMNKVDNALSVSFGL 113
>gi|266622458|ref|ZP_06115393.1| toxin-antitoxin system, toxin component, MazF family [Clostridium
hathewayi DSM 13479]
gi|288865812|gb|EFC98110.1| toxin-antitoxin system, toxin component, MazF family [Clostridium
hathewayi DSM 13479]
Length=150
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (32%), Positives = 56/110 (51%), Gaps = 12/110 (10%)
Query 5 LRGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLT--TTRRTIPTWVAMG 55
LRG +Y DL G +P LIV NN NRH+ V+ +T TT+ +PT V +
Sbjct 14 LRGDLYYADLSPVIGSEQGGLRPVLIVQNNTGNRHSPTVIVAAITSRTTKAKLPTHVPVT 73
Query 56 PSD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ + + + T+ + L +Y+G+++P M +TAL T+ GL
Sbjct 74 REESGLKCDSTILLEQVRTIDRCRLKEYIGQLSPGQMELADTALLTSFGL 123
>gi|336428257|ref|ZP_08608241.1| hypothetical protein HMPREF0994_04247 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336006493|gb|EGN36527.1| hypothetical protein HMPREF0994_04247 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length=212
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/110 (31%), Positives = 57/110 (52%), Gaps = 13/110 (11%)
Query 6 RGQVYRCDLGYG-------AKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAM---- 54
RGQVYRC+ G G +P +I+ N+ N+ + +V+ +T T +P V +
Sbjct 35 RGQVYRCNFGVGIGSEECKERPCVILQYNSANKTSPNVLVAPITHTASKLPVVVPIENKK 94
Query 55 --GPSDPLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ L G V NI + K LGDY+ E+T A M +++ A++ +L +
Sbjct 95 DSASNTLLDGNVLLGNITCVSKARLGDYITELTAAEMKEVDKAISLSLDV 144
>gi|158321295|ref|YP_001513802.1| transcriptional modulator of MazE/toxin, MazF [Alkaliphilus oremlandii
OhILAs]
gi|158141494|gb|ABW19806.1| transcriptional modulator of MazE/toxin, MazF [Alkaliphilus oremlandii
OhILAs]
Length=116
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/109 (32%), Positives = 55/109 (51%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTT--RRTIPTWVAMGP 56
RG ++ DL G +P LI+ N+ NR++ ++ V +T+ + +PT V +
Sbjct 5 RGDIFYADLSPVIGSEQGGVRPVLIIQNDIGNRYSPTIIVVAITSQINKAKLPTHVEIKS 64
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
SD P + + I T+ K L + +G VT M K+N AL +LGL
Sbjct 65 SDYGLPKDSVLLLEQIRTIDKRRLEEKVGHVTDDIMEKVNEALLISLGL 113
>gi|291557223|emb|CBL34340.1| Growth inhibitor [Eubacterium siraeum V10Sc8a]
Length=121
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/109 (34%), Positives = 52/109 (48%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDL-------GYGAKPWLIVSNNARNRHTADVVAVRLTTTR--RTIPTWV---A 53
RG++Y DL G +P LI+ NN N+H+ +A +TT R +P V A
Sbjct 8 RGEIYLADLEPIIGSEQGGIRPVLIIQNNKGNKHSGTTIAAPITTKRIPNRLPVHVFTFA 67
Query 54 MGPSDPLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
P V + I L K L DY+G + TM +I+ AL ++GL
Sbjct 68 GSSGLPQNSSVMLEQIRVLDKSRLTDYVGRINDFTMEEIDRALKISVGL 116
>gi|325678361|ref|ZP_08157981.1| toxin-antitoxin system, toxin component, MazF family [Ruminococcus
albus 8]
gi|324109862|gb|EGC04058.1| toxin-antitoxin system, toxin component, MazF family [Ruminococcus
albus 8]
Length=114
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/108 (32%), Positives = 57/108 (53%), Gaps = 11/108 (10%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTT--TRRTIPTWVAMGP 56
RG +Y DL G +P LIV N+ NRH+ V+A +T+ + +PT +++G
Sbjct 5 RGDIYYADLSPVVGSEQGGLRPVLIVQNDIGNRHSPTVIAAAITSRQDKARLPTHISVGA 64
Query 57 SDPLT--GYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
L+ V + I TL K L + +G++ +MN ++ AL+ + GL
Sbjct 65 GCGLSRDSVVLLEQIRTLDKRRLREKMGQLDKGSMNAVDNALSVSFGL 112
>gi|169335269|ref|ZP_02862462.1| hypothetical protein ANASTE_01677 [Anaerofustis stercorihominis
DSM 17244]
gi|169258007|gb|EDS71973.1| hypothetical protein ANASTE_01677 [Anaerofustis stercorihominis
DSM 17244]
Length=115
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/109 (28%), Positives = 56/109 (52%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTT--RRTIPTWVAMGP 56
RG +Y DL G +P LI+ N+ N+H+ V+ +T++ + +PT +++
Sbjct 5 RGDIYYADLSPIVGSEQGGLRPVLIIQNDVGNKHSPTVIVSAITSSMDKAKLPTHISLSA 64
Query 57 SDPL---TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ L + + I T+ K L + +G V +TMNK+N L+ + G+
Sbjct 65 NSELLNKDSVILLEQIRTIDKQRLREKIGHVDMSTMNKVNEGLSISFGM 113
>gi|225017211|ref|ZP_03706403.1| hypothetical protein CLOSTMETH_01137 [Clostridium methylpentosum
DSM 5476]
gi|224949986|gb|EEG31195.1| hypothetical protein CLOSTMETH_01137 [Clostridium methylpentosum
DSM 5476]
Length=119
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (32%), Positives = 55/109 (51%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTTR--RTIPTWVAMGP 56
RG++Y DL G +P LIV NN N+++ V+A +T+ R +PT + +
Sbjct 5 RGEIYYADLSPVVGSEQGGVRPVLIVQNNVGNKYSPTVIAAAITSQRDKSKLPTHIEIDA 64
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ V + I T+ K L + +GE+ MN IN+AL+ + GL
Sbjct 65 ATCGLSKNSVVLLEQIRTIDKRRLKEKMGELDNGAMNNINSALSVSFGL 113
>gi|194467668|ref|ZP_03073655.1| transcriptional modulator of MazE/toxin, MazF [Lactobacillus
reuteri 100-23]
gi|194454704|gb|EDX43601.1| transcriptional modulator of MazE/toxin, MazF [Lactobacillus
reuteri 100-23]
Length=124
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (32%), Positives = 56/109 (52%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVV--AVRLTTTRRTIPTWVAM-G 55
RG +Y DL G +P LI+ N+ N ++ V+ A+ ++ +PT V + G
Sbjct 8 RGDIYYADLSPVIGSEQGGVRPVLILQNDVGNHYSPTVIIAAITAQMQKKKMPTHVQLRG 67
Query 56 PSDPLT--GYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
S PLT + + + T+ K L D + ++P TM K+N AL ++GL
Sbjct 68 KSLPLTHDSVILLEQLRTIDKQRLKDRIAHLSPETMAKVNKALTISVGL 116
>gi|291543394|emb|CBL16503.1| Growth inhibitor [Ruminococcus sp. 18P13]
Length=113
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (30%), Positives = 55/109 (51%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTTRR--TIPTWVAMGP 56
RG++Y DL G +P LIV N+ N+H+ V+A +T+ R +PT + +
Sbjct 4 RGEIYYADLSPVVGSEQGGVRPVLIVQNDVGNKHSPTVIAAAITSQREKAKLPTHIELRA 63
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ V + I T+ K L + +GE+ +M+++N AL + GL
Sbjct 64 ASCGLSRDSVVLLEQIRTIDKRRLKERMGELDAPSMSQVNNALEISFGL 112
>gi|291542825|emb|CBL15935.1| Growth inhibitor [Ruminococcus bromii L2-63]
Length=174
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/117 (28%), Positives = 58/117 (50%), Gaps = 26/117 (22%)
Query 5 LRGQVYRCDLGYGA-------KPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPS 57
LRG +Y DLG+G +P +I+ N+ N+H+ V+ +T+ + P
Sbjct 6 LRGDMYYADLGHGIGSEQEGYRPVVIIQNDVGNKHSPTVIIASITSKKDAKPKL------ 59
Query 58 DPLTGYVNADN------------IETLGKDELGDYLGEVTPATMNKINTALATALGL 102
P Y++A+N + T+ K LG+++G ++ ++ IN ALA ++GL
Sbjct 60 -PTHYYIDAENGLELPSIVLLEQLRTVDKRRLGNFIGHLSEKHIHGINHALAVSIGL 115
>gi|283795170|ref|ZP_06344323.1| toxin-antitoxin system, toxin component, MazF family [Clostridium
sp. M62/1]
gi|291076816|gb|EFE14180.1| toxin-antitoxin system, toxin component, MazF family [Clostridium
sp. M62/1]
Length=130
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/108 (31%), Positives = 60/108 (56%), Gaps = 10/108 (9%)
Query 5 LRGQVYRCDL-------GYGAKPWLIVSNNARNRHTADVVAVRLTT-TRRTIPT--WVAM 54
LRG++Y +L G +P LI+ N+ NR++ V+ +TT T+ +PT ++
Sbjct 5 LRGEMYYANLDPVFGSEQSGFRPVLIIQNDIGNRYSPTVIVAPITTGTKTKLPTHCYLYE 64
Query 55 GPSDPLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
G + V + + TL K L Y+G++ ++MN+++ ALA ++GL
Sbjct 65 GGEKTASSIVLLEQLRTLDKRRLKRYIGKLKKSSMNEVDRALAISVGL 112
>gi|332800305|ref|YP_004461804.1| transcriptional modulator of MazE/toxin, MazF [Tepidanaerobacter
sp. Re1]
gi|332698040|gb|AEE92497.1| transcriptional modulator of MazE/toxin, MazF [Tepidanaerobacter
sp. Re1]
Length=185
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/110 (28%), Positives = 54/110 (50%), Gaps = 13/110 (11%)
Query 6 RGQVYRCDLGYG-------AKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSD 58
RG+VY+C LG G +P +++ + N + + + +T T T+P + + P
Sbjct 37 RGEVYKCYLGIGIGSEESKERPCVVLQRDRANLESPNTIVAPITHTSSTLPVVIPISPKH 96
Query 59 PLTGYVNAD------NIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+G V D NI + K LGDY+ + P+ M ++ A+A +L +
Sbjct 97 DSSGGVVLDGNVLLGNIVCVSKARLGDYVARLEPSEMKAVDEAIAISLDI 146
>gi|257440874|ref|ZP_05616629.1| toxin-antitoxin system, toxin component, MazF family [Faecalibacterium
prausnitzii A2-165]
gi|257196654|gb|EEU94938.1| toxin-antitoxin system, toxin component, MazF family [Faecalibacterium
prausnitzii A2-165]
Length=116
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (33%), Positives = 54/109 (50%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTT--RRTIPTWVAMGP 56
RG+V+ DL G +P LIV N NRH+ V+A +T+ + +PT + +
Sbjct 5 RGEVFYADLSPVVGSEQGGIRPVLIVQNEIGNRHSPTVIAAAITSRLDKARLPTHINIRA 64
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+D V + I TL K L + G++TP ++N AL +LGL
Sbjct 65 ADTGLAKDSVVLLEQIRTLDKHRLRERAGQITPEDQRRVNQALDVSLGL 113
>gi|154500509|ref|ZP_02038547.1| hypothetical protein BACCAP_04182 [Bacteroides capillosus ATCC
29799]
gi|150270740|gb|EDM98036.1| hypothetical protein BACCAP_04182 [Bacteroides capillosus ATCC
29799]
Length=121
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (30%), Positives = 55/113 (49%), Gaps = 12/113 (10%)
Query 2 NAPLRGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLT--TTRRTIPTWV 52
N+ RG ++ DL G +P LIV N+ NRH+ V+A +T T + +PT +
Sbjct 3 NSVKRGDIFYADLSPVVGSEQGGVRPVLIVQNDTGNRHSPTVIAAAITSQTGKARLPTHI 62
Query 53 AMGPSD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ P V + I TL K L +++G + M +++ A+A + GL
Sbjct 63 DISARSYGLPKDSVVLLEQIRTLDKKRLREHMGRLDETQMQRVDNAIAVSFGL 115
>gi|238922798|ref|YP_002936311.1| putative DNA-binding protein, PemK family [Eubacterium rectale
ATCC 33656]
gi|238874470|gb|ACR74177.1| putative DNA-binding protein, PemK family [Eubacterium rectale
ATCC 33656]
Length=212
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (31%), Positives = 53/108 (50%), Gaps = 13/108 (12%)
Query 6 RGQVYRCDLGYGA-------KPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSD 58
RGQVYRC+LG G +P +I+ N+ NR + + V +T T +P V +
Sbjct 35 RGQVYRCNLGIGVGSEECKERPCVILQYNSANRTSPNTVVAPITHTTSALPIVVPIAEKK 94
Query 59 PLTGYVNAD------NIETLGKDELGDYLGEVTPATMNKINTALATAL 100
+G + D NI + K LGDY+ ++T M ++ A+ +L
Sbjct 95 DSSGKLILDGNVLLGNITCVSKARLGDYITDLTADEMRAVDKAIFISL 142
>gi|197303365|ref|ZP_03168404.1| hypothetical protein RUMLAC_02087 [Ruminococcus lactaris ATCC
29176]
gi|197297363|gb|EDY31924.1| hypothetical protein RUMLAC_02087 [Ruminococcus lactaris ATCC
29176]
Length=114
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/110 (27%), Positives = 52/110 (48%), Gaps = 12/110 (10%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTT--RRTIPTWVAMGP 56
RG +Y DL G +P L++ NN NRH+ ++ +T+ + +PT + +
Sbjct 4 RGDIYYADLSPVVGSEQGGIRPVLVIQNNIGNRHSPTIICAAITSKMNKAKLPTHIEIST 63
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGLP 103
D + + I T+ K L +Y+ + A M K++ A+ +L LP
Sbjct 64 RDYNIVKNSVILLEQIRTIDKQRLKEYVCHIDSAMMKKVDEAICVSLNLP 113
>gi|295090171|emb|CBK76278.1| Growth inhibitor [Clostridium cf. saccharolyticum K10]
Length=138
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/110 (30%), Positives = 58/110 (53%), Gaps = 12/110 (10%)
Query 5 LRGQVYRCDL-------GYGAKPWLIVSNNARNRHTADVVAVRLTT---TRRTIPTWVAM 54
LRG++Y +L G +P LI+ N+ NR++ V+ +T+ + +PT +
Sbjct 5 LRGEIYYANLDPVFGSEQSGFRPVLIIQNDIGNRYSPTVIVAPITSKPDVKAKLPTHCRL 64
Query 55 GPSDPLT--GYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ L V + + TL K L Y+G++ ++MN++N ALA ++GL
Sbjct 65 DLKNCLNEPSVVLLEQLRTLDKRRLKKYIGKLKKSSMNEVNRALAVSVGL 114
>gi|313114316|ref|ZP_07799851.1| toxin-antitoxin system, toxin component, MazF family [Faecalibacterium
cf. prausnitzii KLE1255]
gi|310623371|gb|EFQ06791.1| toxin-antitoxin system, toxin component, MazF family [Faecalibacterium
cf. prausnitzii KLE1255]
Length=116
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/111 (33%), Positives = 56/111 (51%), Gaps = 16/111 (14%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTT--RRTIPTWVAMGP 56
RG+V+ DL G +P LIV N NRH+ V+A +T+ + +PT + +
Sbjct 5 RGEVFYADLSPVVGSEQGGVRPVLIVQNEIGNRHSPTVIAAAITSRLDKARLPTHINIRA 64
Query 57 SDPLTGY-----VNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+D TG V + I TL K L + G++TP +++ AL +LGL
Sbjct 65 AD--TGLAKDSVVLLEQIRTLDKHRLRERAGQITPEDQKRVDQALDVSLGL 113
>gi|148543493|ref|YP_001270863.1| transcriptional modulator of MazE/toxin, MazF [Lactobacillus
reuteri DSM 20016]
gi|184152901|ref|YP_001841242.1| hypothetical protein LAR_0246 [Lactobacillus reuteri JCM 1112]
gi|227363642|ref|ZP_03847756.1| PemK family growth inhibitor [Lactobacillus reuteri MM2-3]
10 more sequence titles
Length=124
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/109 (31%), Positives = 56/109 (52%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVV--AVRLTTTRRTIPTWVAM-G 55
RG +Y DL G +P LI+ N+ N ++ V+ A+ ++ +PT V + G
Sbjct 8 RGDIYYADLSPVIGSEQGGVRPVLILQNDVGNHYSPTVIIAAITAQMQKKKMPTHVQLKG 67
Query 56 PSDPLT--GYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
S PLT + + + T+ K L D + ++P TM K++ AL ++GL
Sbjct 68 KSLPLTHDSVILLEQLRTIDKQRLKDRIAHLSPETMAKVDKALTISVGL 116
>gi|283797063|ref|ZP_06346216.1| toxin-antitoxin system, toxin component, MazF family [Clostridium
sp. M62/1]
gi|291075478|gb|EFE12842.1| toxin-antitoxin system, toxin component, MazF family [Clostridium
sp. M62/1]
Length=133
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/111 (30%), Positives = 58/111 (53%), Gaps = 16/111 (14%)
Query 6 RGQVYRCDL-------GYGAKPWLIVSNNARNRHTADVVAVRLTTT--RRTIPTWVAMGP 56
+G +Y DL G +P LI+ N+ NR + V+A +T+ +R +PT + +
Sbjct 5 KGDIYYADLTPVVGSEQGGVRPVLIIQNDVGNRFSPTVIAAAITSRQGKRILPTHIRL-- 62
Query 57 SDPLTGYVN-----ADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
D L G N + I T+ + L +Y+G + +TM++I+ A+A + GL
Sbjct 63 EDDLQGLHNNSMVLLEQIRTIDRTRLREYIGRLNVSTMHEIDHAIAVSFGL 113
>gi|160933249|ref|ZP_02080638.1| hypothetical protein CLOLEP_02095 [Clostridium leptum DSM 753]
gi|156868323|gb|EDO61695.1| hypothetical protein CLOLEP_02095 [Clostridium leptum DSM 753]
Length=125
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/109 (30%), Positives = 56/109 (52%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTT--TRRTIPTWVAMGP 56
RG ++ DL G +P LIV NN NR + V+A +T+ ++ +PT + +
Sbjct 8 RGDIFYADLSPVVGSEQGGIRPVLIVQNNVGNRFSPTVIAAAITSQKSKANLPTHIQLRA 67
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+D V + I TL K L + +G + P +M++++ AL+ + GL
Sbjct 68 NDSGLSRDSVVLLEQIRTLDKRRLKEKMGTLNPYSMHQVDEALSISFGL 116
>gi|317057317|ref|YP_004105784.1| transcriptional modulator of MazE/toxin, MazF [Ruminococcus albus
7]
gi|315449586|gb|ADU23150.1| transcriptional modulator of MazE/toxin, MazF [Ruminococcus albus
7]
Length=113
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/108 (31%), Positives = 56/108 (52%), Gaps = 11/108 (10%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTT--TRRTIPTWVAMGP 56
RG +Y DL G +P LIV N+ NRH+ V+A +T+ + +PT + +G
Sbjct 5 RGDIYYADLSPVVGSEQGGLRPVLIVQNDIGNRHSPTVIAAAITSRQDKARLPTHITVGT 64
Query 57 SDPLT--GYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
L+ V + I TL K L + +G++ M+ +++AL+ + GL
Sbjct 65 GCGLSRDSVVLLEQIRTLDKRRLREKMGQLDKGAMSAVDSALSVSFGL 112
>gi|160942568|ref|ZP_02089815.1| hypothetical protein FAEPRAM212_00043 [Faecalibacterium prausnitzii
M21/2]
gi|158446152|gb|EDP23155.1| hypothetical protein FAEPRAM212_00043 [Faecalibacterium prausnitzii
M21/2]
gi|295103973|emb|CBL01517.1| Growth inhibitor [Faecalibacterium prausnitzii SL3/3]
Length=116
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (34%), Positives = 54/111 (49%), Gaps = 16/111 (14%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAV----RLTTTRRTIPTWVAM 54
RG+V+ DL G +P LIV N NRH+ V+A RL TR +PT + +
Sbjct 5 RGEVFYADLSPVVGSEQGGVRPVLIVQNEIGNRHSPTVIAAAITSRLDKTR--LPTHINI 62
Query 55 GPSD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+D V + I TL K L + G++T A +++ AL +LGL
Sbjct 63 RAADTGLAKDSVVLLEQIRTLDKHRLRERAGQITAADQKRVDQALDVSLGL 113
>gi|331085750|ref|ZP_08334833.1| hypothetical protein HMPREF0987_01136 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|336435256|ref|ZP_08614973.1| hypothetical protein HMPREF0988_00558 [Lachnospiraceae bacterium
1_4_56FAA]
gi|330406673|gb|EGG86178.1| hypothetical protein HMPREF0987_01136 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|336001647|gb|EGN31783.1| hypothetical protein HMPREF0988_00558 [Lachnospiraceae bacterium
1_4_56FAA]
Length=121
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/115 (34%), Positives = 54/115 (47%), Gaps = 20/115 (17%)
Query 6 RGQVYRCDLG--------YGAKPWLIVSNNARNRHTADVVAVRLTT---------TRRTI 48
RG++Y D G G +P L+VSNN N ++ V V LT T I
Sbjct 4 RGEIYNVDFGNNENSYKQCGVRPALVVSNNRANENSPVVTVVPLTARVWKKKYLPTHVQI 63
Query 49 PTWVAMGPSDPLTGYVNADNIETLGKDELGDYLGEV-TPATMNKINTALATALGL 102
P ++G S P A+ +ETL K++L + LGEV M +I AL +G+
Sbjct 64 PLKASVGLSKPSMAL--AEQVETLDKNQLLEKLGEVYDEMVMQQITIALQIQIGV 116
>gi|238924409|ref|YP_002937925.1| hypothetical protein EUBREC_2050 [Eubacterium rectale ATCC 33656]
gi|238876084|gb|ACR75791.1| hypothetical protein EUBREC_2050 [Eubacterium rectale ATCC 33656]
Length=159
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/110 (32%), Positives = 60/110 (55%), Gaps = 18/110 (16%)
Query 6 RGQVYRCDLGY--------GAKPWLIVSNNARNRHTADVVAVRLTTTRRT-IPTWV---- 52
RGQ+Y Y G +P +IVSN+ N ++ V V +TT +T +PT V
Sbjct 3 RGQIYYVRSNYREEGSEQRGGRPAVIVSNDKNNANSNTVEVVYMTTKPKTDLPTHVYIES 62
Query 53 AMGPSDPLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
A+ PS L + I T+ ++ +G+++GE+T + + ++ ALA +LG+
Sbjct 63 ALRPSTLL-----CEQISTVSEERIGEWIGELTESEVQDLDIALAVSLGM 107
>gi|291541360|emb|CBL14471.1| Growth inhibitor [Roseburia intestinalis XB6B4]
Length=122
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (29%), Positives = 57/109 (53%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTT---TRRTIPTWVAMG 55
RG +Y +L G +P LI+SN+ NRH+ V+ +T+ T+ +PT A+
Sbjct 7 RGDIYYAELNPVIGSEQGGTRPVLIISNDIGNRHSPTVIVAAITSRVHTKAKLPTHTAIR 66
Query 56 PSDPLT--GYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ L + + I T+ K L +Y+G ++ + M +++ ALA ++ L
Sbjct 67 DFEGLNKDSIILLEQIRTIDKKRLQEYIGMLSESEMARVDKALAISVSL 115
>gi|218133423|ref|ZP_03462227.1| hypothetical protein BACPEC_01288 [Bacteroides pectinophilus
ATCC 43243]
gi|217990798|gb|EEC56804.1| hypothetical protein BACPEC_01288 [Bacteroides pectinophilus
ATCC 43243]
Length=120
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (32%), Positives = 54/113 (48%), Gaps = 19/113 (16%)
Query 6 RGQVYRCDLGY-------GAKPWLIVSNNARNRHTADVVAVRLTT---TRRTIPTWVAM- 54
RG +Y D G G +P L+VSNN N+H+ V + L+ ++ +PT V +
Sbjct 4 RGDIYYVDFGEKAGSEQGGVRPALVVSNNKANKHSPVVTVIPLSARVWKKKYLPTHVQIP 63
Query 55 -----GPSDPLTGYVNADNIETLGKDELGDYLGEV-TPATMNKINTALATALG 101
G + P A+ +ETL K LG+ +GEV M +I AL +G
Sbjct 64 LKKSSGLNKPSMAL--AEQVETLDKTRLGERIGEVLDDVVMEQITVALQIQIG 114
>gi|153814247|ref|ZP_01966915.1| hypothetical protein RUMTOR_00456 [Ruminococcus torques ATCC
27756]
gi|145848643|gb|EDK25561.1| hypothetical protein RUMTOR_00456 [Ruminococcus torques ATCC
27756]
Length=120
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (33%), Positives = 54/112 (49%), Gaps = 17/112 (15%)
Query 6 RGQVYRCDLGY-------GAKPWLIVSNNARNRHTADVVAVRLTT---TRRTIPTWVAMG 55
RG +Y D G G +P L+VSNN N+H+ V + L+ ++ +PT V +
Sbjct 4 RGDIYYVDFGEKAGSEQGGVRPALVVSNNKANKHSPVVTVIPLSARVWKKKYLPTHVQI- 62
Query 56 PSDPLTGYVN-----ADNIETLGKDELGDYLGEVT-PATMNKINTALATALG 101
P +G A+ +ETL K LG+ +GEV M +I AL +G
Sbjct 63 PLKKSSGLNKPSMALAEQVETLDKTRLGERIGEVLDDMVMEQITVALQIQIG 114
>gi|291544268|emb|CBL17377.1| Growth inhibitor [Ruminococcus sp. 18P13]
Length=174
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (29%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query 5 LRGQVYRCDLGYGA-------KPWLIVSNNARNRHTADVVAVRL---TTTRRTIPTWVAM 54
LRG ++ DLG G +P +I+ NN NRH+ V+ + T T+ +PT +
Sbjct 6 LRGDIFYADLGKGVGSEQEGYRPVVIIQNNVGNRHSPTVIVAAISSRTATKSKLPTHYYI 65
Query 55 GPSDPLT--GYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
G L V + + T+ K L +++G ++ + ++N ALA ++ L
Sbjct 66 GTECGLEQPSIVLLEQLRTIDKRRLNNFVGRLSAGQITEMNHALAISIDL 115
>gi|225405815|ref|ZP_03761004.1| hypothetical protein CLOSTASPAR_05036 [Clostridium asparagiforme
DSM 15981]
gi|225042655|gb|EEG52901.1| hypothetical protein CLOSTASPAR_05036 [Clostridium asparagiforme
DSM 15981]
Length=332
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/90 (35%), Positives = 50/90 (56%), Gaps = 2/90 (2%)
Query 17 GAKPWLIVSNNARNRHTADVVAVRLTTTRRT-IPTWVAMGPSDPLTGYVNADNIETLGKD 75
G +P +IV N+ N H+ V+ V TT +T +PT V + S P + I T+ K+
Sbjct 43 GTRPAIIVGNDVGNLHSPVVIVVYTTTQPKTELPTHVVVN-SLPQRSTALCEQIYTVSKE 101
Query 76 ELGDYLGEVTPATMNKINTALATALGLPWP 105
+ +Y+G VT + M +I+ ALA ++ L P
Sbjct 102 RVQEYIGRVTESEMEQIDKALAISISLDSP 131
>gi|239628395|ref|ZP_04671426.1| growth inhibitor [Clostridiales bacterium 1_7_47_FAA]
gi|239518541|gb|EEQ58407.1| growth inhibitor [Clostridiales bacterium 1_7_47FAA]
Length=138
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (50%), Gaps = 12/110 (10%)
Query 5 LRGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTT--TRRTIPTWVA-- 53
LRG +Y DL G +P L++ N+ N+++ V+ +T+ T+ IPT V
Sbjct 13 LRGDLYYADLSPVVGSEQGGVRPVLVIQNDVGNKYSPTVIVAAITSRSTKAAIPTHVCIR 72
Query 54 -MGPSDPLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
M V A+ I T+ ++ L +Y+G + M I A+ T+LGL
Sbjct 73 RMRGGLKQDSTVLAEQIRTIDRNRLKEYIGHLDSCQMEGIEQAMVTSLGL 122
>gi|154504833|ref|ZP_02041571.1| hypothetical protein RUMGNA_02343 [Ruminococcus gnavus ATCC 29149]
gi|153794716|gb|EDN77136.1| hypothetical protein RUMGNA_02343 [Ruminococcus gnavus ATCC 29149]
Length=118
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/109 (33%), Positives = 52/109 (48%), Gaps = 13/109 (11%)
Query 6 RGQVYRCDLGY-------GAKPWLIVSNNARNRHTADVVAVRLTT---TRRTIPTWVAMG 55
RG +Y D G G +P L+VSNN N+H+ V V L+ ++ +PT V +
Sbjct 4 RGDIYYVDFGEKDGSKQGGVRPALVVSNNKANKHSPVVTVVPLSARVWKKKYLPTHVQIP 63
Query 56 PSDPLT--GYVNADNIETLGKDELGDYLGEV-TPATMNKINTALATALG 101
L A+ +ETL K LG+ +G+V M +I AL +G
Sbjct 64 KGSGLNKPSMALAEQVETLDKTRLGERIGKVLDDMVMEQITVALQIQIG 112
>gi|302387502|ref|YP_003823324.1| transcriptional modulator of MazE/toxin, MazF [Clostridium saccharolyticum
WM1]
gi|302198130|gb|ADL05701.1| transcriptional modulator of MazE/toxin, MazF [Clostridium saccharolyticum
WM1]
Length=126
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (28%), Positives = 50/96 (53%), Gaps = 6/96 (6%)
Query 12 CDLGYGAKPWLIVSNNARNRHTADVVAVRLT--TTRRTIPTWVAMGPSD---PLTGYVNA 66
C+ G G +P LI+ N+ NR++ V+ +T T + +PT + + V
Sbjct 19 CEQG-GIRPVLIIQNDIGNRYSPTVIVAAITSRTEKSHLPTHIKLCSQQYGLRENSLVLL 77
Query 67 DNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ + T+ + L +Y+G ++ + M ++N ALA + GL
Sbjct 78 EQVRTIDRSRLHEYIGHLSDSQMQQVNEALAVSFGL 113
>gi|339443703|ref|YP_004709707.1| hypothetical protein EGYY_00230 [Eggerthella sp. YY7918]
gi|338903455|dbj|BAK43306.1| hypothetical protein EGYY_00230 [Eggerthella sp. YY7918]
Length=170
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (31%), Positives = 58/110 (53%), Gaps = 12/110 (10%)
Query 4 PLRGQVYR--------CDLGYGAKPWLIVSNNARNRHTADVVAVRLTTT-RRTIPTWVAM 54
P RG V+ C+ G G +P LIV N+A N+ + V+ +T+ +R +PT V +
Sbjct 5 PRRGDVFLAFLDPVIGCEQG-GTRPVLIVQNDAGNKRSRTVIVAAITSKPKRGLPTHVPV 63
Query 55 GPSDPL--TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
L V + ++T+ K L Y+G + + M K+++ALA +LG+
Sbjct 64 PAVAGLREKSVVLLEQLKTIDKARLRAYIGHMGQSQMEKVDSALAVSLGI 113
>gi|125975181|ref|YP_001039091.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum
ATCC 27405]
gi|256003155|ref|ZP_05428147.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum
DSM 2360]
gi|281418397|ref|ZP_06249416.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum
JW20]
gi|125715406|gb|ABN53898.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum
ATCC 27405]
gi|255992846|gb|EEU02936.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum
DSM 2360]
gi|281407481|gb|EFB37740.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum
JW20]
gi|316939347|gb|ADU73381.1| transcriptional modulator of MazE/toxin, MazF [Clostridium thermocellum
DSM 1313]
Length=116
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (28%), Positives = 53/109 (49%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTT--RRTIPTWVAMGP 56
RG ++ DL G +P LIV N+ N+++ V+A +T+ + +PT + +
Sbjct 5 RGDIFYADLSPVIGSEQGGIRPVLIVQNDIGNKYSPTVIASAITSQINKAKLPTHIELSA 64
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ P V + I T+ K L + +G + M K+N AL+ + GL
Sbjct 65 KEYGLPKDSVVLLEQIRTIDKKRLREKIGHLDDELMEKVNEALSISFGL 113
>gi|153956427|ref|YP_001397192.1| transcriptional regulator [Clostridium kluyveri DSM 555]
gi|219856736|ref|YP_002473858.1| hypothetical protein CKR_3393 [Clostridium kluyveri NBRC 12016]
gi|146349285|gb|EDK35821.1| Predicted transcriptional regulator [Clostridium kluyveri DSM
555]
gi|219570460|dbj|BAH08444.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length=126
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (29%), Positives = 49/96 (52%), Gaps = 6/96 (6%)
Query 12 CDLGYGAKPWLIVSNNARNRHTADVVAVRLT--TTRRTIPTWVAMGPSD---PLTGYVNA 66
C+ G G +P LI+ N+ NR++ V+ +T T + +PT + + V
Sbjct 19 CEQG-GIRPVLIIQNDIGNRYSPTVIVAAITSRTEKSHLPTHIRLCSQQYGLRQNSLVLL 77
Query 67 DNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ + T+ + L +Y+G ++ M +IN ALA + GL
Sbjct 78 EQVRTIDRSRLREYIGHLSDLQMQQINEALAVSFGL 113
>gi|295102084|emb|CBK99629.1| Growth inhibitor [Faecalibacterium prausnitzii L2-6]
Length=116
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/109 (31%), Positives = 52/109 (48%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTT--RRTIPTWVAMGP 56
RG+V+ DL G +P LIV N NRH+ V+A +T+ + +PT + +
Sbjct 5 RGEVFYADLSPVVGSEQGGVRPVLIVQNEIGNRHSPTVIAAAITSRLDKARLPTHINIRA 64
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
D V + I TL K L + G++T +++ AL +LGL
Sbjct 65 EDTGLAKDSVVLLEQIRTLDKHRLRERAGQITAEDQRRVDQALDVSLGL 113
>gi|303242260|ref|ZP_07328747.1| transcriptional modulator of MazE/toxin, MazF [Acetivibrio cellulolyticus
CD2]
gi|302590170|gb|EFL59931.1| transcriptional modulator of MazE/toxin, MazF [Acetivibrio cellulolyticus
CD2]
Length=116
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/109 (27%), Positives = 53/109 (49%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTTT--RRTIPTWVAMGP 56
RG ++ DL G +P LIV N+ N+++ V+A +T+ + +PT + +
Sbjct 5 RGDIFYADLSPVIGSEQGGIRPVLIVQNDIGNKYSPTVIASAITSQINKAKLPTHIELSA 64
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
D P + + I T+ K L + +G + M ++N AL+ + GL
Sbjct 65 KDYGLPKDSVILLEQIRTIDKKRLREKIGHLDDELMERVNDALSVSFGL 113
>gi|160937462|ref|ZP_02084823.1| hypothetical protein CLOBOL_02353 [Clostridium bolteae ATCC BAA-613]
gi|158439531|gb|EDP17281.1| hypothetical protein CLOBOL_02353 [Clostridium bolteae ATCC BAA-613]
Length=142
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (50%), Gaps = 12/110 (10%)
Query 5 LRGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTT--TRRTIPTWVA-- 53
LRG +Y DL G +P L++ N+ N+++ V+ +T+ T+ IPT V
Sbjct 17 LRGDLYYADLSPVVGSEQGGIRPVLVIQNDVGNKYSPTVIVAAITSRSTKAAIPTHVCIR 76
Query 54 -MGPSDPLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
M V A+ I T+ ++ L +Y+G + M I A+ T+LGL
Sbjct 77 RMRGGLKQDSTVLAEQIRTIDRNRLKEYIGHLDSGQMAGIEQAMVTSLGL 126
>gi|304385538|ref|ZP_07367882.1| PemK family transcriptional regulator [Pediococcus acidilactici
DSM 20284]
gi|304328042|gb|EFL95264.1| PemK family transcriptional regulator [Pediococcus acidilactici
DSM 20284]
Length=120
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (30%), Positives = 52/109 (48%), Gaps = 12/109 (11%)
Query 6 RGQVYRCDLG-------YGAKPWLIVSNNARNRHTADVVAVRLTT--TRRTIPTWVAMGP 56
RG ++ DL G +P L++ NN N ++ V+ +TT T+ +PT VA+
Sbjct 8 RGDLFYADLSPVVGSEQGGMRPVLVIQNNVGNHYSPTVIIAAITTRITKPKMPTHVAIRA 67
Query 57 SD---PLTGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGL 102
+ P + + I T+ K L D +G + M +N AL +LGL
Sbjct 68 GEAGNPRASVILMEQIRTIDKQRLHDRIGRLDGQKMKLVNEALKVSLGL 116
>gi|223986462|ref|ZP_03636464.1| hypothetical protein HOLDEFILI_03779 [Holdemania filiformis DSM
12042]
gi|223961563|gb|EEF66073.1| hypothetical protein HOLDEFILI_03779 [Holdemania filiformis DSM
12042]
Length=114
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query 6 RGQVYRCDLGY-------GAKPWLIVSNNARNRHTADVVAVRLTT--TRRTIPTWVAMGP 56
RG VY DL G +P +++ N+ NR + ++ +++ T+ IPT V + P
Sbjct 5 RGDVYYADLAGSVGSEQGGLRPVVVIQNDKGNRFSPTLIVAPISSRLTKPPIPTHVIL-P 63
Query 57 SDPL--TGYVNADNIETLGKDELGDYLGEVTPATMNKINTALATALGLPW 104
+D L V + I T+ K LG ++ + T+ I+ AL +LGL W
Sbjct 64 ADSLEKASIVLLEQIRTIDKQRLGQWVCSLDRKTLQAIDEALCVSLGLEW 113
Lambda K H
0.317 0.134 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131458853568
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40