BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1501

Length=273
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|167969311|ref|ZP_02551588.1|  hypothetical protein MtubH3_1530...   567    7e-160
gi|15608639|ref|NP_216017.1|  hypothetical protein Rv1501 [Mycoba...   566    1e-159
gi|148822723|ref|YP_001287477.1|  hypothetical protein TBFG_11532...   564    5e-159
gi|289574185|ref|ZP_06454412.1|  conserved hypothetical protein [...   563    7e-159
gi|289447107|ref|ZP_06436851.1|  phytanoyl-CoA dioxygenase [Mycob...   517    7e-145
gi|183982327|ref|YP_001850618.1|  hypothetical protein MMAR_2314 ...   470    9e-131
gi|330808193|ref|YP_004352655.1|  hypothetical protein PSEBR_a145...   134    2e-29 
gi|338782302|gb|EGP46677.1|  phytanoyl-CoA dioxygenase [Achromoba...   130    2e-28 
gi|154253753|ref|YP_001414577.1|  phytanoyl-CoA dioxygenase [Parv...   120    2e-25 
gi|149276450|ref|ZP_01882594.1|  Phytanoyl-CoA dioxygenase [Pedob...   119    5e-25 
gi|325103562|ref|YP_004273216.1|  Phytanoyl-CoA dioxygenase [Pedo...   117    2e-24 
gi|333894123|ref|YP_004467998.1|  Phytanoyl-CoA dioxygenase [Alte...   110    2e-22 
gi|254515912|ref|ZP_05127972.1|  Phytanoyl-CoA dioxygenase superf...   108    7e-22 
gi|218460590|ref|ZP_03500681.1|  phytanoyl-CoA dioxygenase [Rhizo...   107    1e-21 
gi|170722915|ref|YP_001750603.1|  phytanoyl-CoA dioxygenase [Pseu...   106    4e-21 
gi|94314158|ref|YP_587367.1|  putative dioxygenase [Cupriavidus m...   101    1e-19 
gi|323139989|ref|ZP_08075005.1|  Phytanoyl-CoA dioxygenase [Methy...   100    3e-19 
gi|307728819|ref|YP_003906043.1|  Phytanoyl-CoA dioxygenase [Burk...  99.4    5e-19 
gi|186477055|ref|YP_001858525.1|  phytanoyl-CoA dioxygenase [Burk...  90.5    3e-16 
gi|116250573|ref|YP_766411.1|  deoxygenase [Rhizobium leguminosar...  88.2    1e-15 
gi|340628598|ref|YP_004747050.1|  hypothetical protein MCAN_36451...  87.0    3e-15 
gi|15610769|ref|NP_218150.1|  hypothetical protein Rv3633 [Mycoba...  85.9    7e-15 
gi|152994862|ref|YP_001339697.1|  phytanoyl-CoA dioxygenase [Mari...  85.5    7e-15 
gi|306778517|ref|ZP_07416854.1|  hypothetical protein TMBG_02169 ...  85.1    1e-14 
gi|4895124|gb|AAD32731.1|  MmcH [Streptomyces lavendulae]             84.7    2e-14 
gi|154251308|ref|YP_001412132.1|  phytanoyl-CoA dioxygenase [Parv...  84.3    2e-14 
gi|316931574|ref|YP_004106556.1|  Phytanoyl-CoA dioxygenase [Rhod...  78.6    1e-12 
gi|339477006|gb|EGP92097.1|  hypothetical protein MYCGRDRAFT_3510...  77.4    2e-12 
gi|192288876|ref|YP_001989481.1|  Phytanoyl-CoA dioxygenase [Rhod...  77.0    3e-12 
gi|39933518|ref|NP_945794.1|  hypothetical protein RPA0441 [Rhodo...  77.0    3e-12 
gi|118618777|ref|YP_907109.1|  hypothetical protein MUL_3479 [Myc...  76.6    3e-12 
gi|41409258|ref|NP_962094.1|  hypothetical protein MAP3160 [Mycob...  76.6    4e-12 
gi|183981567|ref|YP_001849858.1|  hypothetical protein MMAR_1551 ...  76.3    4e-12 
gi|336459287|gb|EGO38231.1|  protein involved in biosynthesis of ...  76.3    4e-12 
gi|255625370|ref|XP_002540619.1|  conserved hypothetical protein ...  75.5    8e-12 
gi|118467270|ref|YP_883146.1|  phytanoyl-CoA dioxygenase (PhyH) f...  74.3    2e-11 
gi|254776406|ref|ZP_05217922.1|  phytanoyl-CoA dioxygenase (PhyH)...  73.6    3e-11 
gi|342860984|ref|ZP_08717633.1|  phytanoyl-CoA dioxygenase (PhyH)...  73.2    4e-11 
gi|296169237|ref|ZP_06850890.1|  phytanoyl-CoA dioxygenase [Mycob...  71.6    1e-10 
gi|340522233|gb|EGR52466.1|  predicted protein [Trichoderma reese...  70.5    2e-10 
gi|318075467|ref|ZP_07982799.1|  hypothetical protein SSA3_01792 ...  70.5    2e-10 
gi|302519381|ref|ZP_07271723.1|  phytanoyl-CoA dioxygenase [Strep...  70.5    3e-10 
gi|88706243|ref|ZP_01103950.1|  conserved hypothetical protein [C...  70.5    3e-10 
gi|154253118|ref|YP_001413942.1|  phytanoyl-CoA dioxygenase [Parv...  70.5    3e-10 
gi|212539396|ref|XP_002149853.1|  conserved hypothetical protein ...  70.1    4e-10 
gi|154250668|ref|YP_001411492.1|  phytanoyl-CoA dioxygenase [Parv...  69.7    4e-10 
gi|311104573|ref|YP_003977426.1|  phytanoyl-CoA dioxygenase [Achr...  69.7    4e-10 
gi|167578415|ref|ZP_02371289.1|  MmcH, putative [Burkholderia tha...  69.7    4e-10 
gi|254821154|ref|ZP_05226155.1|  phytanoyl-CoA dioxygenase (PhyH)...  69.7    5e-10 
gi|339296446|gb|AEJ48557.1|  hypothetical protein CCDC5079_3368 [...  69.3    6e-10 


>gi|167969311|ref|ZP_02551588.1| hypothetical protein MtubH3_15305 [Mycobacterium tuberculosis 
H37Ra]
Length=278

 Score =  567 bits (1461),  Expect = 7e-160, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60
            MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA
Sbjct  6    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  65

Query  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  120
            RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV
Sbjct  66   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  125

Query  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180
            FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP
Sbjct  126  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  185

Query  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240
            VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
Sbjct  186  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  245

Query  241  RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  273
            RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG
Sbjct  246  RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  278


>gi|15608639|ref|NP_216017.1| hypothetical protein Rv1501 [Mycobacterium tuberculosis H37Rv]
 gi|15840965|ref|NP_336002.1| hypothetical protein MT1550 [Mycobacterium tuberculosis CDC1551]
 gi|31792698|ref|NP_855191.1| hypothetical protein Mb1539 [Mycobacterium bovis AF2122/97]
 73 more sequence titles
 Length=273

 Score =  566 bits (1459),  Expect = 1e-159, Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)

Query  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60
            MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA
Sbjct  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60

Query  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  120
            RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV
Sbjct  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  120

Query  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180
            FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP
Sbjct  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180

Query  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240
            VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
Sbjct  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240

Query  241  RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  273
            RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG
Sbjct  241  RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  273


>gi|148822723|ref|YP_001287477.1| hypothetical protein TBFG_11532 [Mycobacterium tuberculosis F11]
 gi|148721250|gb|ABR05875.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
Length=273

 Score =  564 bits (1454),  Expect = 5e-159, Method: Compositional matrix adjust.
 Identities = 272/273 (99%), Positives = 272/273 (99%), Gaps = 0/273 (0%)

Query  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60
            MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA
Sbjct  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60

Query  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  120
            RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQN FILPSFPPFSTPDV
Sbjct  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNSFILPSFPPFSTPDV  120

Query  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180
            FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP
Sbjct  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180

Query  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240
            VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
Sbjct  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240

Query  241  RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  273
            RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG
Sbjct  241  RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  273


>gi|289574185|ref|ZP_06454412.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|339631571|ref|YP_004723213.1| hypothetical protein MAF_15260 [Mycobacterium africanum GM041182]
 gi|289538616|gb|EFD43194.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|339330927|emb|CCC26598.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=273

 Score =  563 bits (1452),  Expect = 7e-159, Method: Compositional matrix adjust.
 Identities = 272/273 (99%), Positives = 272/273 (99%), Gaps = 0/273 (0%)

Query  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60
            MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKE LA
Sbjct  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKEGLA  60

Query  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  120
            RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV
Sbjct  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  120

Query  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180
            FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP
Sbjct  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180

Query  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240
            VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
Sbjct  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240

Query  241  RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  273
            RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG
Sbjct  241  RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  273


>gi|289447107|ref|ZP_06436851.1| phytanoyl-CoA dioxygenase [Mycobacterium tuberculosis CPHL_A]
 gi|289420065|gb|EFD17266.1| phytanoyl-CoA dioxygenase [Mycobacterium tuberculosis CPHL_A]
Length=250

 Score =  517 bits (1332),  Expect = 7e-145, Method: Compositional matrix adjust.
 Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)

Query  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60
            MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA
Sbjct  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60

Query  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  120
            RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV
Sbjct  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  120

Query  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180
            FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP
Sbjct  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180

Query  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240
            VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
Sbjct  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240

Query  241  RTQQLLGWYS  250
            RTQQLLGWYS
Sbjct  241  RTQQLLGWYS  250


>gi|183982327|ref|YP_001850618.1| hypothetical protein MMAR_2314 [Mycobacterium marinum M]
 gi|183175653|gb|ACC40763.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=273

 Score =  470 bits (1210),  Expect = 9e-131, Method: Compositional matrix adjust.
 Identities = 220/273 (81%), Positives = 248/273 (91%), Gaps = 0/273 (0%)

Query  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60
            M  V+ + +  L Q+QDAL+CVGYAVVEDVLD   LA TRDRMY VQERIL+EIG+ERL+
Sbjct  1    MTAVECDASPWLVQLQDALHCVGYAVVEDVLDAGFLATTRDRMYLVQERILSEIGQERLS  60

Query  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV  120
             AGELGVLRLMMKYDPHFF FLEIPEVL++VDRVLS+TAILHLQNGFILPSFP  +TP+V
Sbjct  61   IAGELGVLRLMMKYDPHFFAFLEIPEVLNVVDRVLSDTAILHLQNGFILPSFPSVATPEV  120

Query  121  FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180
            FQNAFHQDFPRVLSGY+ASVN+MFAIDPFTRD GATLVVPG+HQR EKPD +YL RNAV 
Sbjct  121  FQNAFHQDFPRVLSGYVASVNVMFAIDPFTRDNGATLVVPGTHQRAEKPDASYLTRNAVA  180

Query  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA  240
            V+C AG++ VFDSTLWHAAG+N SGKDRLAINHQF+RSFFKQQIDYVRALGD V+L+QPA
Sbjct  181  VECPAGAMLVFDSTLWHAAGQNISGKDRLAINHQFSRSFFKQQIDYVRALGDTVILDQPA  240

Query  241  RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  273
            RTQQLLGWY+RVVT+LDEYYQPP++RLYRKGQG
Sbjct  241  RTQQLLGWYTRVVTSLDEYYQPPERRLYRKGQG  273


>gi|330808193|ref|YP_004352655.1| hypothetical protein PSEBR_a1456 [Pseudomonas brassicacearum 
subsp. brassicacearum NFM421]
 gi|327376301|gb|AEA67651.1| conserved hypothetical protein [Pseudomonas brassicacearum subsp. 
brassicacearum NFM421]
Length=259

 Score =  134 bits (336),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 86/264 (33%), Positives = 126/264 (48%), Gaps = 9/264 (3%)

Query  12   LDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLM  71
            ++ V  AL   GY  +  ++  + L   R+ +    +R      +  + +  E     ++
Sbjct  1    MNPVLQALQANGYVCLPSLITGSLLDQLREDLGHAIDRCRQVQLENGITQRTEQTAHHIL  60

Query  72   MKYDPHFFTFLEIPEVLSIVD---RVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQD  128
            M+ D  F   L       IVD    +L   AIL+   G         S+ D +    H+D
Sbjct  61   MQ-DSSFVELLNRFAEWGIVDILRHMLGGAAILNSFGGL-----NNLSSTDAYVRNVHRD  114

Query  129  FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSL  188
                 +  +     +  +D FT D GATL +PGSH   +KPD       A     +AGS+
Sbjct  115  VRSWSAESMQMAQALVLLDDFTVDNGATLFLPGSHAAPDKPDPQVFEEQARKALGSAGSI  174

Query  189  FVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
            ++FDS +WHAAG N +   R  +   FTRS+FK Q DY RALG+     Q    QQLLGW
Sbjct  175  YLFDSRIWHAAGVNRTDLPRRCLTLTFTRSYFKPQFDYCRALGEDFCRSQTPSMQQLLGW  234

Query  249  YSRVVTNLDEYYQPPDKRLYRKGQ  272
            Y+R  + L E+YQP ++R YRK Q
Sbjct  235  YARTPSTLHEWYQPEEQRFYRKSQ  258


>gi|338782302|gb|EGP46677.1| phytanoyl-CoA dioxygenase [Achromobacter xylosoxidans AXX-A]
Length=261

 Score =  130 bits (328),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 78/259 (31%), Positives = 136/259 (53%), Gaps = 8/259 (3%)

Query  12   LDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIG-KERLARAGELGVLRL  70
            +++  ++L   GYA+ +     + +AA R+R   V+E +  + G ++RL R  E   LR 
Sbjct  1    MERAIESLRTFGYAIYDAGFSPSEMAALRERFDAVREMVYQQGGGRDRLTRIDEQHTLRA  60

Query  71   MMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQDFP  130
            M+ +D  F      P++L+I  +++ +  +L+ QNG I P     +  +  Q  +H+D P
Sbjct  61   MLAHDASFLELARHPDILAIARQLVGDYIVLNQQNGVINPG----NGREYNQGKWHRDLP  116

Query  131  --RVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSL  188
                +S    ++N +F +D FT D GATLV P SH+    P   +L + A+     AG  
Sbjct  117  YQHFVSSRPLAINALFCVDEFTHDNGATLVAPASHKMEAFPSDEFLRQTALQAVAPAGHF  176

Query  189  FVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
             + D+  +H+   N S +DR A+NH +T    +QQID    LG A   ++ +  + LLG+
Sbjct  177  IILDAMTFHSGAVNRSPRDRRAVNHVYTIPMIRQQIDLPAVLG-ADYRKEDSSVRSLLGY  235

Query  249  YSRVVTNLDEYYQPPDKRL  267
               V  +++EYY   ++R+
Sbjct  236  GLEVPRSVEEYYLSREQRV  254


>gi|154253753|ref|YP_001414577.1| phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
 gi|154157703|gb|ABS64920.1| Phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
Length=274

 Score =  120 bits (302),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 77/260 (30%), Positives = 130/260 (50%), Gaps = 9/260 (3%)

Query  10   TSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIG-KERLARAGELGVL  68
            T++D+  + L  +GYAV++     A L   ++     + ++    G K+ L +  E   +
Sbjct  17   TAIDRAIEQLRLLGYAVLDGSYSRAELTQLQEAFCAARRKMEEHFGGKDSLEKIDEHNTI  76

Query  69   RLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQD  128
            R+ M Y+  F        ++ +  R++ +  IL+ QNG   P     ++    Q AFH+D
Sbjct  77   RIPMMYERVFLDLALNQAIIELCRRMIGDYFILNQQNGISNPG----NSTRYNQGAFHRD  132

Query  129  FP--RVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAG  186
             P    +S    ++N +F +D FT + GAT V+PGSH++   P    +    V +   AG
Sbjct  133  LPYQHFVSDRPLAINALFCLDDFTTENGATYVLPGSHKQSAYPSDATVDALKVQIPAPAG  192

Query  187  SLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLL  246
            S  + D  L+H+ G N + ++R A+NH ++    KQQID   ALGD    +   R  QLL
Sbjct  193  SFIILDCMLYHSGGVNRTDRERRAVNHVYSIPMLKQQIDLPAALGDTFSDDPGVR--QLL  250

Query  247  GWYSRVVTNLDEYYQPPDKR  266
            G+ S V  ++  YY+   K+
Sbjct  251  GYDSTVPLDVAAYYRSRTKK  270


>gi|149276450|ref|ZP_01882594.1| Phytanoyl-CoA dioxygenase [Pedobacter sp. BAL39]
 gi|149232970|gb|EDM38345.1| Phytanoyl-CoA dioxygenase [Pedobacter sp. BAL39]
Length=267

 Score =  119 bits (298),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 63/148 (43%), Positives = 83/148 (57%), Gaps = 0/148 (0%)

Query  126  HQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAA  185
            H+D           V ++ A+D FT D GAT  + GSH   EKPD  Y   +A       
Sbjct  120  HRDIRSFTGNMKLMVMMLVALDDFTIDNGATYFLSGSHHHEEKPDDEYFYAHADRALAKK  179

Query  186  GSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQL  245
            GS+ +FD+ LWHAAGRN +   R A+   FTR F KQQ+DY R LG     E     +Q+
Sbjct  180  GSVILFDANLWHAAGRNHTDLPRRALTMAFTRPFLKQQLDYPRFLGYEYGEELSGVLRQV  239

Query  246  LGWYSRVVTNLDEYYQPPDKRLYRKGQG  273
            LG+ +R+  +L EYYQP  KR+Y+ GQG
Sbjct  240  LGYNARIPADLQEYYQPVPKRMYQPGQG  267


>gi|325103562|ref|YP_004273216.1| Phytanoyl-CoA dioxygenase [Pedobacter saltans DSM 12145]
 gi|324972410|gb|ADY51394.1| Phytanoyl-CoA dioxygenase [Pedobacter saltans DSM 12145]
Length=267

 Score =  117 bits (292),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 74/270 (28%), Positives = 125/270 (47%), Gaps = 20/270 (7%)

Query  11   SLDQVQDALNCVGYAVVEDVLDEASLAATRDRM---YRVQERILTEIGKERLARAGELGV  67
            ++   + A++  G+ + E+ ++E  +    + +   Y ++  I  + G E        G 
Sbjct  11   TISDFESAMDQFGWVIYENAVEENFINEIINDLEPAYLLRRAIQIQNGIEENME----GT  66

Query  68   LRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNG-FILPSFP---PFSTPDVFQN  123
            L  +++ D     FLE         +   +  + H  NG +IL  F     F     + +
Sbjct  67   LHHLLEKDNFSMPFLE---------QKYCDKEMKHFLNGNYILNGFSGVLNFKNFKAYVH  117

Query  124  AFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQC  183
              H+D       +  ++ ++  +D +T + GAT  + GSH   +KPD  +   NA     
Sbjct  118  NIHRDIRSFTGNFKIAIQMIVPLDDYTLENGATYFLTGSHHIEDKPDEQFFYMNADRAVS  177

Query  184  AAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQ  243
              GS+ +FDS +WHA G N +   R A+   FTR FFK Q D+ R LG           +
Sbjct  178  KKGSIILFDSNIWHAVGNNNTDNPRRALTLTFTRPFFKPQFDFPRYLGYDFTDYLSPHLK  237

Query  244  QLLGWYSRVVTNLDEYYQPPDKRLYRKGQG  273
            Q++G+ SR+  N  E+YQPP  R+Y+ GQG
Sbjct  238  QVIGYNSRISANFQEFYQPPHLRMYQPGQG  267


>gi|333894123|ref|YP_004467998.1| Phytanoyl-CoA dioxygenase [Alteromonas sp. SN2]
 gi|332994141|gb|AEF04196.1| Phytanoyl-CoA dioxygenase [Alteromonas sp. SN2]
Length=255

 Score =  110 bits (276),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 67/265 (26%), Positives = 132/265 (50%), Gaps = 16/265 (6%)

Query  11   SLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAG--ELGVL  68
            +L  +++ +   G  V++D++D  +++  R         +   I ++ L R    + G++
Sbjct  3    NLHHLKEEMVDTGVVVIDDIVDTDTVSILR-------AELEAAIEEDSLVRDSVFDAGMV  55

Query  69   RLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVFQNAFHQ  127
               M       + ++  ++  ++D + +  AI++  Q+  + P    + +        H 
Sbjct  56   HNCMLRGEAMCSLIQNKKINDVIDALFTPYAIIYAYQSSSLYPGRGNYGS------RIHV  109

Query  128  DFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGS  187
            D PR +  YI ++  + A++ FT+D G T  +PGSH+    PD ++   NA  + C  G+
Sbjct  110  DCPRFIPNYITNLGAIIALNDFTQDNGGTYYLPGSHKSESLPDQSFFYENAKQLSCNRGA  169

Query  188  LFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLG  247
            L +F+  L HAAG N +   R A+   + R + +Q+ D+ R +    + +     ++ +G
Sbjct  170  LILFNGRLVHAAGVNRTDTARHALTINYCRPYMRQRFDFPRLISTEQLRQFNDIGKRRIG  229

Query  248  WYSRVVTNLDEYYQPPDKRLYRKGQ  272
               R+ T+LDE+Y P DKRLY+ GQ
Sbjct  230  MDVRMPTSLDEFYLPADKRLYKPGQ  254


>gi|254515912|ref|ZP_05127972.1| Phytanoyl-CoA dioxygenase superfamily protein [gamma proteobacterium 
NOR5-3]
 gi|219675634|gb|EED32000.1| Phytanoyl-CoA dioxygenase superfamily protein [gamma proteobacterium 
NOR5-3]
Length=256

 Score =  108 bits (271),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 62/184 (34%), Positives = 98/184 (54%), Gaps = 9/184 (4%)

Query  93   RVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQDFPRVLSGYIASVNIMFAIDPFTRD  152
            R+LS T+I++    +   S PP ++   +    H D PR + GY  ++ ++F +D FT +
Sbjct  79   RLLSPTSIIY---AYQSSSAPPGASN--YGGRIHVDSPRFIRGYRTNLGVIFPLDDFTEE  133

Query  153  TGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAIN  212
             G TL   GSH+R E P           + C+AG + VFD+ L HA G N + + R A+ 
Sbjct  134  NGGTLYCKGSHKREELPQEEEFYERVSVITCSAGDMIVFDARLAHATGVNRTSEARHALT  193

Query  213  HQFTRSFFKQQIDYVRALGDAVVLEQPART---QQLLGWYSRVVTNLDEYYQPPDKRLYR  269
              F RS+ +Q+ D+ R + +A      A     ++LLG   R+  +L E+Y P  +RLY+
Sbjct  194  INFCRSYMRQRFDFCR-MAEAQQEHIKALNLDGKRLLGMNVRMPVSLSEFYLPESERLYK  252

Query  270  KGQG  273
             GQG
Sbjct  253  PGQG  256


>gi|218460590|ref|ZP_03500681.1| phytanoyl-CoA dioxygenase [Rhizobium etli Kim 5]
Length=211

 Score =  107 bits (268),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 67/209 (33%), Positives = 103/209 (50%), Gaps = 8/209 (3%)

Query  55   GKERLARAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPP  114
            G+ RL    E   +RL M Y+  F        +  +  R+LS+  +L+ QNG   P    
Sbjct  4    GRARLEAIDEHNTIRLPMLYNKLFLQLAMNDNITELCGRLLSDYFVLNQQNGISNPG---  60

Query  115  FSTPDVFQNAFHQDFP--RVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHT  172
             S     Q A+H+D P     S    ++N ++ ID FT + GAT V+P SH++   P   
Sbjct  61   -SAARYNQGAYHRDLPFQHFTSSRPLAINALYCIDDFTTENGATFVIPASHKQEPFPSDA  119

Query  173  YLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGD  232
             +    + V   AGS  V D   +H  G N + ++R A+NH +T    KQQID+  AL +
Sbjct  120  MVNALQLQVPARAGSFIVLDCMTYHTGGVNHTQRERRAVNHVYTIPLLKQQIDFPAALKE  179

Query  233  AVVLEQPARTQQLLGWYSRVVTNLDEYYQ  261
                +Q AR  +LLG+   + T++  YY+
Sbjct  180  DFTNDQKAR--RLLGYGLSIPTDVQSYYR  206


>gi|170722915|ref|YP_001750603.1| phytanoyl-CoA dioxygenase [Pseudomonas putida W619]
 gi|169760918|gb|ACA74234.1| Phytanoyl-CoA dioxygenase [Pseudomonas putida W619]
Length=259

 Score =  106 bits (264),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 75/252 (30%), Positives = 122/252 (49%), Gaps = 21/252 (8%)

Query  25   AVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLMMKYDPHFFTFLEI  84
            A+VE + ++   A    R Y+++  I  +             V  L+ ++D  F   L+ 
Sbjct  26   AIVEQMREDIHKAYAICRDYQIKNGIDQDTSNT---------VHHLIGQFDS-FLDCLKA  75

Query  85   PEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV--FQNAFHQDFPRVLSGYIASV-N  141
              + + ++R      IL+   G I       +T D   +    H+D  R  SG +  + N
Sbjct  76   YPIYAFIERYFGGQFILNSYGGAI-------NTRDSQSYAQRVHRDI-RSFSGDMPLLLN  127

Query  142  IMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHAAGR  201
             +  +D FT   GAT ++ GSH+   KP   Y   +A      AGS+ +F+S +WHA G 
Sbjct  128  TLVMLDDFTAANGATWMLSGSHKAEAKPTDDYFMAHAEQAIAPAGSILMFNSNVWHAGGS  187

Query  202  NTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGWYSRVVTNLDEYYQ  261
            N + + R ++   F++ F KQQ DY RALG  +        +Q++G+ +RV   LDE+YQ
Sbjct  188  NVTDQVRRSVTPMFSKPFIKQQFDYPRALGYDLGPNLDPMMRQVIGYNARVPATLDEWYQ  247

Query  262  PPDKRLYRKGQG  273
            PP +R+Y   QG
Sbjct  248  PPARRMYHSNQG  259


>gi|94314158|ref|YP_587367.1| putative dioxygenase [Cupriavidus metallidurans CH34]
 gi|93358010|gb|ABF12098.1| hypothetical protein (putative dioxygenase) [Cupriavidus metallidurans 
CH34]
Length=259

 Score =  101 bits (251),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 75/271 (28%), Positives = 124/271 (46%), Gaps = 21/271 (7%)

Query  9    NTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGE----  64
            NT+L + +  L   G+ VV  ++ E  + A       +   ++  + K    R       
Sbjct  2    NTNLARHEAELESQGWTVVPRLIHEELVGA-------LNHALVPSLNKRDAIRTANGLME  54

Query  65   --LGVLRLMMKYDPHFFTFLEIPEVLS-IVDRVLSETAILHLQNGFILPSFPPFSTPDVF  121
               G    ++  D  +   L   E L  IV        IL+   GFI       +    +
Sbjct  55   NCQGTAHHVLSDDRCYVELLAKFEALDPIVKWFFGGNYILNSYGGFI-------NDGKTY  107

Query  122  QNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPV  181
             +  H+D     +     +N +  +D FT   GAT ++ GS  + E+P +    R+A  V
Sbjct  108  AHDVHRDIRFHSNAKRFMLNTLVMLDEFTEPNGATHILSGSQHQPERPSNDTFFRDAARV  167

Query  182  QCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPAR  241
                GS+ +FDS +WHAAG NT+   R A+   FT  FFK Q+DY R +  + V      
Sbjct  168  TGERGSVLLFDSRIWHAAGENTTNLPRRALTLTFTCPFFKPQLDYPRLMASSGVSTLTPF  227

Query  242  TQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQ  272
             +Q++G+ +RV  +L+E+Y P ++R Y++GQ
Sbjct  228  LRQVIGFNARVPASLEEFYVPVEQRFYQRGQ  258


>gi|323139989|ref|ZP_08075005.1| Phytanoyl-CoA dioxygenase [Methylocystis sp. ATCC 49242]
 gi|322394755|gb|EFX97340.1| Phytanoyl-CoA dioxygenase [Methylocystis sp. ATCC 49242]
Length=274

 Score =  100 bits (249),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 69/231 (30%), Positives = 117/231 (51%), Gaps = 16/231 (6%)

Query  8    NNTSLDQVQDALNCVGYAVVEDVL--DEASLAATR-DRMYRVQERILTEIGKERLARAGE  64
            NN+  D++ + L   G+++V   L  +E   A+ R D +Y  Q   + E G++ +    +
Sbjct  16   NNSEQDRIIEELTRDGFSLVRGCLLKEEVDYASRRLDEIYGAQ---VQEFGEDNIGLIHD  72

Query  65   LGVLRLMMKYDPHFFTFLEIPE-VLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQN  123
              ++R M+ +D  F   +   E +L IV RV+     L  Q G + P      + +++Q 
Sbjct  73   RHIVRSMLAFDDFFLHRIACNECLLEIVKRVIGNNLSLSSQVGILNPP-----SGELYQT  127

Query  124  AFHQDFPR---VLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP  180
            A+H++       +S  IA +  +FAI+PF   TG T  +PGSH     P   Y+ ++ V 
Sbjct  128  AWHRELQYQHFTISRPIA-LQTLFAIEPFNEVTGGTFFIPGSHLHEMFPSEEYVHKHEVQ  186

Query  181  VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALG  231
            + C  G   +FD+  +H AG N S   R AIN+ +T    +QQI++ R +G
Sbjct  187  IICEPGDTVIFDALAYHRAGVNRSNSIRRAINNLYTVPLIQQQINFSRMMG  237


>gi|307728819|ref|YP_003906043.1| Phytanoyl-CoA dioxygenase [Burkholderia sp. CCGE1003]
 gi|307583354|gb|ADN56752.1| Phytanoyl-CoA dioxygenase [Burkholderia sp. CCGE1003]
Length=272

 Score = 99.4 bits (246),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 66/237 (28%), Positives = 110/237 (47%), Gaps = 18/237 (7%)

Query  5    KVENNTSLDQVQDALNCVGYAVVEDVLDEA---SLAATRDRMYRVQERILTEIGKER-LA  60
            ++ +  ++D+    L   GY ++E  L       L +  DR+Y+ Q   + E G E+ LA
Sbjct  11   RLASEDAIDEAVAELRVNGYTIIESGLPAGLIDRLKSGIDRIYQTQ---IDEFGDEQALA  67

Query  61   RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPD-  119
               +  + R  + YDP F +    P ++++  R+L    +L  QNG I       + PD 
Sbjct  68   SISDTDIARCTLAYDPDFLSVATAPNLMNLAARLLGNEFVLMQQNGII-------NRPDR  120

Query  120  -VFQNAFHQD--FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLAR  176
              +Q  +H+D  +    S    + N +  +D FT + GA+ V+P +H     P   +  R
Sbjct  121  QNYQVKWHRDLSYQHWTSSKTIAFNALLCVDEFTHENGASFVLPATHHIEAFPTDQFATR  180

Query  177  NAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDA  233
            +   +   AGS  V D+ L+H  G N S   R A+NH     F  QQ+++  AL  A
Sbjct  181  HEKQIAAPAGSFIVLDAMLYHRGGINVSNGVRRAVNHLIGLPFLAQQVNFESALESA  237


>gi|186477055|ref|YP_001858525.1| phytanoyl-CoA dioxygenase [Burkholderia phymatum STM815]
 gi|184193514|gb|ACC71479.1| Phytanoyl-CoA dioxygenase [Burkholderia phymatum STM815]
Length=277

 Score = 90.5 bits (223),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 58/220 (27%), Positives = 100/220 (46%), Gaps = 12/220 (5%)

Query  12   LDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKER-LARAGELGVLRL  70
             D+    L   GY V++  L    +   +  + R+ +  + E+G E+ LA   +  + R 
Sbjct  23   FDEAVAELRINGYTVIDSGLPAGLIEKLKSGIDRIYQTQIHELGDEQALASINDTDIARC  82

Query  71   MMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV--FQNAFHQD  128
            ++ YD  F T    P ++ +  R+L    +L  QNG I       + PD   +Q  +H+D
Sbjct  83   VLTYDADFLTVATAPNLMKLATRLLGTEFVLMQQNGII-------NRPDRQNYQVKWHRD  135

Query  129  --FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAG  186
              +    S    + N +  +D FT   GA+ V+P +H     P   ++ ++   +   AG
Sbjct  136  LSYQHWTSSKTIAFNALLCVDEFTLKNGASFVLPATHHIEAFPTDRFVRQHERQIAAPAG  195

Query  187  SLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDY  226
            S  V D+ L+H  G N S   R A+NH     F  QQ+++
Sbjct  196  SFIVLDAMLYHRGGINVSNDVRRAVNHLIGLPFLAQQVNF  235


>gi|116250573|ref|YP_766411.1| deoxygenase [Rhizobium leguminosarum bv. viciae 3841]
 gi|32261043|emb|CAE00194.1| hypothetical protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255221|emb|CAK06296.1| putative deoxygenase [Rhizobium leguminosarum bv. viciae 3841]
Length=273

 Score = 88.2 bits (217),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 65/232 (29%), Positives = 103/232 (45%), Gaps = 8/232 (3%)

Query  6    VENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKE--RLARAG  63
             E N   D + + +  +GY  ++  L  A L        R +    TE       L++  
Sbjct  13   TEANDIYDILAEEVRLLGYTTLDSGLAGAQLDELSQFFNRAELEYDTEATDRGYDLSKIN  72

Query  64   ELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQN  123
            E   +RL+    P+F+  +    + +++ R+L    IL+  NG I             Q 
Sbjct  73   ERDTIRLLPMLCPNFWEVVFNGPLHALLSRLLGGYFILNQVNGLINRG----HQSKYHQA  128

Query  124  AFHQDFP--RVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPV  181
             +H+D P     S    ++N +FA+D FT + G+T V+PG+H R   P    + R    V
Sbjct  129  QYHRDLPYQHFTSSRPLAINALFALDDFTIENGSTRVIPGTHHREAFPPDEVVRRLETHV  188

Query  182  QCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDA  233
                G+  V D  ++HA G N + K+R AINH FT    +QQ      LG+A
Sbjct  189  TVKRGTFIVLDCMVYHAGGTNKTDKNRRAINHVFTIPMLRQQFHIPSVLGEA  240


>gi|340628598|ref|YP_004747050.1| hypothetical protein MCAN_36451 [Mycobacterium canettii CIPT 
140010059]
 gi|340006788|emb|CCC45976.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=291

 Score = 87.0 bits (214),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 73/274 (27%), Positives = 126/274 (46%), Gaps = 30/274 (10%)

Query  9    NTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGK-----ERLARAG  63
            ++S++++   ++  GY VVEDVLD  S+AA      R++  + T I       + LAR G
Sbjct  4    SSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPG  63

Query  64   ELGVLRL---------MMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPP  114
             + V R+         ++ +   +      P++L +++ VL    +L     + + S   
Sbjct  64   HVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLL----SWCMTSN--  117

Query  115  FSTPDVFQNAFHQD---FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDH  171
               P       H D   +P          N + A+  FT D GAT VVPGSH+  E+P  
Sbjct  118  -QLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSP  176

Query  172  TYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALG  231
             Y      PV+  AG   +++ +LWH A  N +   R A+   F   F +QQ++   ++ 
Sbjct  177  PY--PEGKPVEIKAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIP  234

Query  232  DAVVLEQPARTQQLLGW--YSRVVTNLDEYYQPP  263
              +V     R Q+L+G+  Y+  +  +D  ++PP
Sbjct  235  RELVRRFEPRLQELIGYGLYAGKMGRID--WRPP  266


>gi|15610769|ref|NP_218150.1| hypothetical protein Rv3633 [Mycobacterium tuberculosis H37Rv]
 gi|15843245|ref|NP_338282.1| hypothetical protein MT3735 [Mycobacterium tuberculosis CDC1551]
 gi|31794803|ref|NP_857296.1| hypothetical protein Mb3657 [Mycobacterium bovis AF2122/97]
 63 more sequence titles
 Length=291

 Score = 85.9 bits (211),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 73/274 (27%), Positives = 126/274 (46%), Gaps = 30/274 (10%)

Query  9    NTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGK-----ERLARAG  63
            ++S++++   ++  GY VVEDVLD  S+AA      R++  + T I       + LAR G
Sbjct  4    SSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPG  63

Query  64   ELGVLRL---------MMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPP  114
             + V R+         ++ +   +      P++L +++ VL    +L     + + S   
Sbjct  64   HVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLL----SWCMTSN--  117

Query  115  FSTPDVFQNAFHQD---FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDH  171
               P       H D   +P          N + A+  FT D GAT VVPGSH+  E+P  
Sbjct  118  -QLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSP  176

Query  172  TYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALG  231
             Y      PV+  AG   +++ +LWH A  N +   R A+   F   F +QQ++   ++ 
Sbjct  177  PY--PEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIP  234

Query  232  DAVVLEQPARTQQLLGW--YSRVVTNLDEYYQPP  263
              +V     R Q+L+G+  Y+  +  +D  ++PP
Sbjct  235  RELVRCFEPRLQELIGYGLYAGKMGRID--WRPP  266


>gi|152994862|ref|YP_001339697.1| phytanoyl-CoA dioxygenase [Marinomonas sp. MWYL1]
 gi|150835786|gb|ABR69762.1| Phytanoyl-CoA dioxygenase [Marinomonas sp. MWYL1]
Length=267

 Score = 85.5 bits (210),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 62/249 (25%), Positives = 117/249 (47%), Gaps = 14/249 (5%)

Query  23   GYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLMMKYDPHFFTFL  82
            G+ +++    ++ + A    + +     L   G+E L    E   +R    YDP +    
Sbjct  27   GFTILKSNFSDSDIKAISTMVEKTHVEYLDLYGEEYLISIDEHNTVRAPFLYDPIYLKVS  86

Query  83   EIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAF-HQDFP--RVLSGYIAS  139
               +V+ +V+ +L    IL+ QN  I P        D +   F H+D P    ++    +
Sbjct  87   FNEKVMEVVEHILKSNFILNQQNIIINPG-----GGDKYNQLFWHRDLPYQHFVTSRPIA  141

Query  140  VNIMFAIDPFTRDTGATLVVPGSHQRIEK-PDHTYLARNAVPVQCAAGSLFVFDSTLWHA  198
            +N ++ +  FT D G+T V+PGSH +IEK P + +L  N +    ++G   + DS L+H+
Sbjct  142  LNALYCVCDFTFDNGSTQVLPGSH-KIEKFPGNKFLEENKMQFYVSSGDYLLIDSMLYHS  200

Query  199  AGRNTSGKDRLAINHQFTRSFFKQQIDYVRA--LGDAVVLEQPARTQQLLGWYSRVVTNL  256
               N +   R+ IN+ ++    ++QID+  +  L D   +E   R ++ LG      +++
Sbjct  201  GSINKTSDRRIGINNVYSTPIIRRQIDFNSSDFLYDISSIEN--RFKKYLGLQYTTCSSV  258

Query  257  DEYYQPPDK  265
             +Y    +K
Sbjct  259  SDYLTSREK  267


>gi|306778517|ref|ZP_07416854.1| hypothetical protein TMBG_02169 [Mycobacterium tuberculosis SUMu002]
 gi|306786539|ref|ZP_07424861.1| hypothetical protein TMCG_01132 [Mycobacterium tuberculosis SUMu003]
 gi|306790906|ref|ZP_07429228.1| hypothetical protein TMDG_01365 [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 Length=291

 Score = 85.1 bits (209),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 73/274 (27%), Positives = 126/274 (46%), Gaps = 30/274 (10%)

Query  9    NTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGK-----ERLARAG  63
            ++S++++   ++  GY VVEDVLD  S+AA      R++  + T I       + LAR G
Sbjct  4    SSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPG  63

Query  64   ELGVLRL---------MMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPP  114
             + V R+         ++ +   +      P++L +++ VL    +L     + + S   
Sbjct  64   HVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLL----SWCMTSN--  117

Query  115  FSTPDVFQNAFHQD---FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDH  171
               P       H D   +P          N + A+  FT D GAT VVPGSH+  E+P  
Sbjct  118  -QLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPAP  176

Query  172  TYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALG  231
             Y      PV+  AG   +++ +LWH A  N +   R A+   F   F +QQ++   ++ 
Sbjct  177  PY--PEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIP  234

Query  232  DAVVLEQPARTQQLLGW--YSRVVTNLDEYYQPP  263
              +V     R Q+L+G+  Y+  +  +D  ++PP
Sbjct  235  RELVRCFEPRLQELIGYGLYAGKMGRID--WRPP  266


>gi|4895124|gb|AAD32731.1| MmcH [Streptomyces lavendulae]
Length=254

 Score = 84.7 bits (208),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 71/233 (31%), Positives = 105/233 (46%), Gaps = 16/233 (6%)

Query  22   VGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLMMKYDPHFFTF  81
             GY ++E  L  A     R R+  V E+   E G   L   G   V  L+ K +  F   
Sbjct  19   AGYCLIECPLPAAVFEKLRGRLLEVAEQE-RENGSAFLYDGGNQRVFSLLNKGE-EFEQN  76

Query  82   LEIPEVLSIVDRVLSETAILHLQNGFILPS-FPPFSTPDVFQNAFHQD--FPRV-LSGYI  137
            ++ P V+ +++ +L          GF+L S     + P   +   H D  F R     Y 
Sbjct  77   VQDPTVMLLMEEILG--------FGFLLSSTHANIAGPGGSRMHLHADQTFARPPWPPYP  128

Query  138  ASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNA--VPVQCAAGSLFVFDSTL  195
               N M+ +D FT D GAT +VPGSH    +PD+     N   V V   AGS+ VFD  L
Sbjct  129  LVANSMWMLDDFTEDNGATRLVPGSHLLGRQPDYDRGEGNTETVAVCAPAGSVMVFDGRL  188

Query  196  WHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
            WH  G NT+ + R  I + + R + +QQ ++   L + V        ++LLG+
Sbjct  189  WHQTGANTTDRPRHGILNYYCRGYVRQQQNFFSGLREDVATRATPELRRLLGY  241


>gi|154251308|ref|YP_001412132.1| phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
 gi|154155258|gb|ABS62475.1| Phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
Length=265

 Score = 84.3 bits (207),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 70/256 (28%), Positives = 108/256 (43%), Gaps = 24/256 (9%)

Query  5    KVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGE  64
            K+    S+ + +  L   G  ++EDVLD   +A  R  + R  E                
Sbjct  7    KLPRARSVAEAKQQLTEHGLTIMEDVLDAEGIARVRAALKRGIEADNAN-----------  55

Query  65   LGVLRLMMKYDP-----HFFTFLEIPEVL-SIVDRVLSETAILHLQNG-FILPSFPP-FS  116
             GV      +DP       F  +   +V   +V    +   + +L +G F+L +F    +
Sbjct  56   -GVQLHGFSFDPDTLNTRVFNLIGKDQVFRDLVQHPAAVELVRYLLDGPFLLSNFSANVT  114

Query  117  TPDVFQNAFHQD---FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTY  173
             P       H D    P     Y  ++N+ +A+D FT + GAT  VPGSH +   P    
Sbjct  115  APGSGAMGMHADQGYVPAPWPSYPLAINVAWALDDFTVENGATRFVPGSHLKDHGPGKAS  174

Query  174  LARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKD-RLAINHQFTRSFFKQQIDYVRALGD  232
                 VP+ C AGS+FV D  +WH  G NTSG D R  +   + R F + Q ++   L  
Sbjct  175  ERAQTVPIICKAGSIFVMDGRVWHQTGPNTSGGDTRAGLFAYYVRPFIRPQWNWYLTLAP  234

Query  233  AVVLEQPARTQQLLGW  248
             VV       +++LG+
Sbjct  235  EVVRGASPLLREMLGY  250


>gi|316931574|ref|YP_004106556.1| Phytanoyl-CoA dioxygenase [Rhodopseudomonas palustris DX-1]
 gi|315599288|gb|ADU41823.1| Phytanoyl-CoA dioxygenase [Rhodopseudomonas palustris DX-1]
Length=282

 Score = 78.6 bits (192),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 63/229 (28%), Positives = 99/229 (44%), Gaps = 12/229 (5%)

Query  23   GYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLMMKYDPHFFTFL  82
            GY V+E   D A +AA  + + R++     +  K        L V  L+  YD  F+   
Sbjct  18   GYTVIERAADPALVAALIEAVERIERDHQLDCAKTSFEGFKTLRVNNLLT-YDEVFWQVP  76

Query  83   EIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQD---FPRVLSGYIAS  139
                VL IV+ VL +  +L      +L        P       H+D    P        +
Sbjct  77   LHGSVLPIVEAVLDKECLLSSFCSLVL-------GPGQEAQPIHEDTQLIPLPRPHIPIT  129

Query  140  VNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHAA  199
            +N ++A+  FT   GAT ++PGSH+    P +     +A+     AGS+ +FDS LWH  
Sbjct  130  LNAIWALSDFTATNGATRIIPGSHKNETSPVYGQ-DYDAITATMPAGSVMLFDSALWHGG  188

Query  200  GRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
            G NTS   R A +  +   + +QQ +    +   +    P R Q+L G+
Sbjct  189  GPNTSEARRFAFSCAYCWGWMRQQENLQLGIPREIAQRFPRRLQELCGY  237


>gi|339477006|gb|EGP92097.1| hypothetical protein MYCGRDRAFT_35104 [Mycosphaerella graminicola 
IPO323]
Length=281

 Score = 77.4 bits (189),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 67/254 (27%), Positives = 115/254 (46%), Gaps = 21/254 (8%)

Query  1    MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA  60
            +I     + + LD+ +  L   G+AVV DVL     A    R+++ +E       + R+A
Sbjct  4    LITDTAADASKLDEAKQRLLTEGWAVVPDVLTRDQSAEVLSRLWQAKEASEARGDRTRMA  63

Query  61   R--AGELGV-LRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPP-FS  116
                 E  + +  +M+ D  F   +  P  + +V  VL E         FI+ +F    +
Sbjct  64   HLDPNESNIRIFYLMELDKIFRDLISHPTAVEMVKAVLGE--------DFIISNFTANIA  115

Query  117  TPDVFQNAFHQDFPRVLSGYIAS---VNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTY  173
             P     A H D   V+     S   +N ++ +    ++ GATL +PGS++ + + D   
Sbjct  116  RPGSSSMALHSDQSIVMPAPWQSTWALNCIWCLTDVYKENGATLYIPGSNKWMNREDIPG  175

Query  174  LA-RNAVPVQCAAGSLFVFDSTLWHAAGRN-TSGKDRLAINHQFTRSFFKQQIDYVRALG  231
             A R   P +  AGS+ + D  +WH +G N T  +DR  +   +T SF +QQ+++   L 
Sbjct  176  DAPRLLRPFEAKAGSIILMDGRVWHTSGSNVTRDQDRALLFGYYTASFLRQQVNWTAKLS  235

Query  232  ----DAVVLEQPAR  241
                D++  E  AR
Sbjct  236  QDIQDSLSEEMKAR  249


>gi|192288876|ref|YP_001989481.1| Phytanoyl-CoA dioxygenase [Rhodopseudomonas palustris TIE-1]
 gi|192282625|gb|ACE99005.1| Phytanoyl-CoA dioxygenase [Rhodopseudomonas palustris TIE-1]
Length=282

 Score = 77.0 bits (188),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 63/231 (28%), Positives = 103/231 (45%), Gaps = 16/231 (6%)

Query  23   GYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRL--MMKYDPHFFT  80
            GY V+E   D A +AA    + R++     ++G  + +  G    LR+  ++ YD  F+ 
Sbjct  18   GYTVIERAADPALVAALIGAVERIERD--HQLGCAKTSFEG-FKTLRVNNLLTYDEVFWD  74

Query  81   FLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQD---FPRVLSGYI  137
                  VL IV+ VL +  +L      +L        P       H+D    P       
Sbjct  75   VPLHSSVLPIVEAVLDKECLLSSFCSLVL-------GPGQEAQPIHEDTQLIPLPRPHIP  127

Query  138  ASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWH  197
             ++N ++A+  FT   GAT ++PGSH+    P +     +AV     AGS+ +FDS LWH
Sbjct  128  ITLNAIWALSDFTATNGATRIIPGSHKYATSPVYGQ-DYDAVTATMPAGSVMLFDSALWH  186

Query  198  AAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
              G N+S   R A +  +   + +QQ +    +   +    P R Q+L G+
Sbjct  187  GGGPNSSDARRFAFSCAYCWGWMRQQENLQLGIPREIAQRFPRRLQELCGY  237


>gi|39933518|ref|NP_945794.1| hypothetical protein RPA0441 [Rhodopseudomonas palustris CGA009]
 gi|39647364|emb|CAE25885.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length=282

 Score = 77.0 bits (188),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 63/231 (28%), Positives = 103/231 (45%), Gaps = 16/231 (6%)

Query  23   GYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRL--MMKYDPHFFT  80
            GY V+E   D A +AA    + R++     ++G  + +  G    LR+  ++ YD  F+ 
Sbjct  18   GYTVIERAADPALVAALIGAVERIERD--HQLGCAKTSFEG-FKTLRVNNLLTYDEVFWE  74

Query  81   FLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQD---FPRVLSGYI  137
                  VL +V+ VL +  +L      +L        P       H+D    P       
Sbjct  75   VPLHSSVLPVVEAVLDKECLLSSFCSLVL-------GPGQEAQPIHEDTQLIPLPRPHIP  127

Query  138  ASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWH  197
             ++N ++A+  FT   GAT ++PGSH+    P +     +AV     AGS+ +FDS LWH
Sbjct  128  ITLNAIWALSDFTATNGATRIIPGSHKYETSPVYGQ-DYDAVTATMPAGSVMLFDSALWH  186

Query  198  AAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
              G NTS   R A +  +   + +QQ +    +   +    P R Q+L G+
Sbjct  187  GGGPNTSEARRFAFSCAYCWGWMRQQENLQLGIPREIAQRFPRRLQELCGY  237


>gi|118618777|ref|YP_907109.1| hypothetical protein MUL_3479 [Mycobacterium ulcerans Agy99]
 gi|118570887|gb|ABL05638.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=282

 Score = 76.6 bits (187),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 57/172 (34%), Positives = 83/172 (49%), Gaps = 22/172 (12%)

Query  85   PEVLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVFQNAFHQD----FPRVLSGYIAS  139
            P VL+++DR+L    +L  LQ   ILP        +  Q   H D     PR  +   A+
Sbjct  103  PRVLAVLDRILMPNYLLSALQAINILPG-------EDAQLPHHDDGFYPIPRPRAPLAAA  155

Query  140  VNIMFAIDPFTRDTGATLVVPGSHQ---RIEKPDHTYLARNAVPVQCAAGSLFVFDSTLW  196
               ++AID FT D GAT+V+PGSH+   R   PD   L     PV   AGS   F  TLW
Sbjct  156  T--IWAIDDFTADNGATVVIPGSHRWGRRPPGPDDQVL-----PVVMPAGSCVFFVGTLW  208

Query  197  HAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
            H  G NTS  +RLA+  Q+   + +    Y+ ++   +        +++LG+
Sbjct  209  HGGGANTSTSERLAVTAQYCEPWLRPMEAYILSISREIARAVSDDIRRMLGY  260


>gi|41409258|ref|NP_962094.1| hypothetical protein MAP3160 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398078|gb|AAS05708.1| hypothetical protein MAP_3160 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=277

 Score = 76.6 bits (187),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 53/149 (36%), Positives = 77/149 (52%), Gaps = 22/149 (14%)

Query  81   FLEIPEVLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVFQNAFHQD----FPRVLSG  135
             ++ P VL+++DR+L    +L  LQ   I P        +  Q A H D     PR  + 
Sbjct  91   LVDHPRVLAVLDRLLMPNYLLSALQAINIQPG-------EAAQLAHHDDGFYPVPRPRAP  143

Query  136  YIASVNIMFAIDPFTRDTGATLVVPGSH---QRIEKPDHTYLARNAVPVQCAAGSLFVFD  192
              A+   ++AID FT D GAT++ PGSH   +R   PD       A+PV   AGS  +F 
Sbjct  144  LAAAT--IWAIDDFTADNGATVLYPGSHRWGKRRPGPDD-----EAIPVVMPAGSCVLFV  196

Query  193  STLWHAAGRNTSGKDRLAINHQFTRSFFK  221
             TLWH  G NT+ +DRLA+  Q+ + + +
Sbjct  197  GTLWHGGGANTTDRDRLAVTAQYCQPWLR  225


>gi|183981567|ref|YP_001849858.1| hypothetical protein MMAR_1551 [Mycobacterium marinum M]
 gi|183174893|gb|ACC40003.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=287

 Score = 76.3 bits (186),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 57/172 (34%), Positives = 83/172 (49%), Gaps = 22/172 (12%)

Query  85   PEVLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVFQNAFHQD----FPRVLSGYIAS  139
            P VL+++DR+L    +L  LQ   ILP        +  Q   H D     PR  +   A+
Sbjct  105  PRVLAVLDRILMPNYLLSALQAINILPG-------EDAQLPHHDDGFYPIPRPRAPLAAA  157

Query  140  VNIMFAIDPFTRDTGATLVVPGSHQ---RIEKPDHTYLARNAVPVQCAAGSLFVFDSTLW  196
               ++AID FT D GAT+V+PGSH+   R   PD   L     PV  +AGS   F  TLW
Sbjct  158  T--IWAIDDFTADNGATVVIPGSHRWGRRPPGPDDQVL-----PVVMSAGSCVFFVGTLW  210

Query  197  HAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
            H  G NTS  +RLA+  Q+   + +    Y  ++   +        +++LG+
Sbjct  211  HGGGANTSTSERLAVTAQYCEPWLRPMEAYTLSISREIARAVSDDIRRMLGY  262


>gi|336459287|gb|EGO38231.1| protein involved in biosynthesis of mitomycin antibiotics/polyketide 
fumonisin [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=287

 Score = 76.3 bits (186),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 53/149 (36%), Positives = 77/149 (52%), Gaps = 22/149 (14%)

Query  81   FLEIPEVLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVFQNAFHQD----FPRVLSG  135
             ++ P VL+++DR+L    +L  LQ   I P        +  Q A H D     PR  + 
Sbjct  101  LVDHPRVLAVLDRLLMPNYLLSALQAINIQPG-------EAAQLAHHDDGFYAVPRPRAP  153

Query  136  YIASVNIMFAIDPFTRDTGATLVVPGSH---QRIEKPDHTYLARNAVPVQCAAGSLFVFD  192
              A+   ++AID FT D GAT++ PGSH   +R   PD       A+PV   AGS  +F 
Sbjct  154  LAAAT--IWAIDDFTADNGATVLYPGSHRWGKRRPGPDD-----EAIPVVMPAGSCVLFV  206

Query  193  STLWHAAGRNTSGKDRLAINHQFTRSFFK  221
             TLWH  G NT+ +DRLA+  Q+ + + +
Sbjct  207  GTLWHGGGANTTDRDRLAVTAQYCQPWLR  235


>gi|255625370|ref|XP_002540619.1| conserved hypothetical protein [Ricinus communis]
 gi|223494675|gb|EEF21764.1| conserved hypothetical protein [Ricinus communis]
Length=97

 Score = 75.5 bits (184),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 34/86 (40%), Positives = 51/86 (60%), Gaps = 0/86 (0%)

Query  146  IDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSG  205
            +D FT   G+T ++ GSH+  EKP   Y  ++A      AGS+ +F+S +WHA G N + 
Sbjct  2    LDDFTPHNGSTWMLSGSHKYAEKPSDDYFKQHAEQAIGPAGSILLFNSNVWHAGGNNETD  61

Query  206  KDRLAINHQFTRSFFKQQIDYVRALG  231
              R ++   F++ F KQQ DY RA+G
Sbjct  62   LQRRSVTPMFSKPFMKQQFDYPRAMG  87


>gi|118467270|ref|YP_883146.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium 
avium 104]
 gi|118168557|gb|ABK69454.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium 
avium 104]
Length=287

 Score = 74.3 bits (181),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 52/149 (35%), Positives = 76/149 (52%), Gaps = 22/149 (14%)

Query  81   FLEIPEVLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVFQNAFHQD----FPRVLSG  135
             ++ P VL+++DR+L    +L  LQ   I P        +  Q A H D     PR  + 
Sbjct  101  LVDHPRVLAVLDRLLMPNYLLSALQAINIQPG-------EAAQLAHHDDGFYPVPRPRAP  153

Query  136  YIASVNIMFAIDPFTRDTGATLVVPGSH---QRIEKPDHTYLARNAVPVQCAAGSLFVFD  192
              A+   ++AID FT D GAT++ PGSH   +R   PD       A+PV    GS  +F 
Sbjct  154  LAAAT--IWAIDDFTADNGATVLYPGSHRWGKRRPGPDD-----EAIPVVMPVGSCVLFV  206

Query  193  STLWHAAGRNTSGKDRLAINHQFTRSFFK  221
             TLWH  G NT+ +DRLA+  Q+ + + +
Sbjct  207  GTLWHGGGANTTDRDRLAVTAQYCQPWLR  235


>gi|254776406|ref|ZP_05217922.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium 
avium subsp. avium ATCC 25291]
Length=287

 Score = 73.6 bits (179),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 52/143 (37%), Positives = 74/143 (52%), Gaps = 22/143 (15%)

Query  87   VLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVFQNAFHQD----FPRVLSGYIASVN  141
            VL+++DR+L    +L  LQ   I P        +  Q A H D     PR  +   A+  
Sbjct  107  VLAVLDRLLMPNYLLSALQAINIQPG-------EAAQLAHHDDGFYPVPRPRAPLAAAT-  158

Query  142  IMFAIDPFTRDTGATLVVPGSH---QRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHA  198
             ++AID FT D GAT++ PGSH   +R   PD       A+PV   AGS  +F  TLWH 
Sbjct  159  -IWAIDEFTADNGATVLYPGSHRWGKRRPGPDD-----EAIPVVMPAGSCVLFVGTLWHG  212

Query  199  AGRNTSGKDRLAINHQFTRSFFK  221
             G NT+ +DRLA+  Q+ + + +
Sbjct  213  GGANTTDRDRLAVTAQYCQPWLR  235


>gi|342860984|ref|ZP_08717633.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium 
colombiense CECT 3035]
 gi|342131428|gb|EGT84698.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium 
colombiense CECT 3035]
Length=289

 Score = 73.2 bits (178),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 72/262 (28%), Positives = 113/262 (44%), Gaps = 41/262 (15%)

Query  22   VGYAVVEDVLDEASLAATRDRMYRVQERILT--------EIGKERLARAGE---------  64
             G + V+  + EA +AA     Y + E +L+        E+ +  L   G          
Sbjct  27   TGGSAVDSAIAEADMAALDRDGYVIWENLLSAEQCSQIREVVRPWLGHTGRNSFEGLRTQ  86

Query  65   --LGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVF  121
                VL      DP     ++ P VL+ +DR+L    +L  LQ   I P        +  
Sbjct  87   RIYSVLSRTRVCDP----LVDDPRVLAALDRLLMPNYLLSALQAINIQPG-------EAA  135

Query  122  QNAFHQD----FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARN  177
            Q A H D     PR      A+   ++AID FT D GAT+V PGSH+  ++      A  
Sbjct  136  QLAHHDDGFYPIPRPREPLAAAT--IWAIDDFTADNGATVVYPGSHRWGKR--RPGPADQ  191

Query  178  AVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLE  237
            A+PV   AGS   F  TLWH  G N + ++RLA+  Q+ + + +    Y  ++   +   
Sbjct  192  ALPVVMPAGSCVFFVGTLWHGGGANNTDRERLAVTAQYCQPWLRPMEAYTLSISRDIARA  251

Query  238  QPARTQQLLGW--YSRVVTNLD  257
                 +++LG+  +   V N+D
Sbjct  252  VSDDMRRMLGYSIHPPFVGNVD  273


>gi|296169237|ref|ZP_06850890.1| phytanoyl-CoA dioxygenase [Mycobacterium parascrofulaceum ATCC 
BAA-614]
 gi|295896135|gb|EFG75802.1| phytanoyl-CoA dioxygenase [Mycobacterium parascrofulaceum ATCC 
BAA-614]
Length=287

 Score = 71.6 bits (174),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 67/219 (31%), Positives = 99/219 (46%), Gaps = 31/219 (14%)

Query  23   GYAVVEDVLDEASLAATRDRMYRVQERILT--------EIGKERLARAG--ELGVLRLMM  72
            G + V+  + EA +AA     Y + E +LT        E+ +  L   G      LR   
Sbjct  28   GGSAVDGAIVEADMAALDRDGYVIWEGLLTPEECDQIREVVRPWLGHTGRNSFEGLRTQR  87

Query  73   KYDPHFFT-----FLEIPEVLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVFQNAFH  126
             Y     T      ++ P VL+++DR+L    +L  LQ   I P        +  Q A H
Sbjct  88   IYSLLSRTRVCDGIVDNPRVLAVLDRLLMPNYLLSALQAINIQPG-------EAAQLAHH  140

Query  127  QD----FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQ  182
             D     PR      A+   ++AID FT D GAT++ PGSH+  ++         A+PV 
Sbjct  141  DDGFYPVPRPRDPLAAAT--IWAIDDFTADNGATVLYPGSHRWGKR--RPGPGDQAMPVV  196

Query  183  CAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFK  221
              AGS   F  TLWH  G N++ +DRLAI  Q+ + + +
Sbjct  197  MPAGSCVFFVGTLWHGGGANSTDRDRLAITAQYCQPWLR  235


>gi|340522233|gb|EGR52466.1| predicted protein [Trichoderma reesei QM6a]
Length=312

 Score = 70.5 bits (171),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 39/111 (36%), Positives = 59/111 (54%), Gaps = 10/111 (9%)

Query  141  NIMFAIDPFTRDTGATLVVPGSH----QRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLW  196
             +M A+D +T   GAT++VP SH    +R+ KP+       A+PV   AGS+  F S LW
Sbjct  168  GVMIALDDYTATNGATVIVPDSHLWDSRRVPKPEE------AIPVIMPAGSILYFVSLLW  221

Query  197  HAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLG  247
            H  G N S K RLA+  Q+ + + +   + + A+    + E P R   +LG
Sbjct  222  HGGGANRSDKSRLALTAQYCQPWIRPMENLILAVDWEKLDEMPPRLVDMLG  272


>gi|318075467|ref|ZP_07982799.1| hypothetical protein SSA3_01792 [Streptomyces sp. SA3_actF]
Length=296

 Score = 70.5 bits (171),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 68/258 (27%), Positives = 112/258 (44%), Gaps = 23/258 (8%)

Query  6    VENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRM-YRVQERILTEIGKERLARAGE  64
            V  +T LD+V   L   G  +VE+ +D A+LA  R+ +   ++    +E G +      +
Sbjct  10   VTPDTPLDEVVGILERQGAVIVEEFVDPATLAGLREDLGLGLETAGYSESGYD----GKK  65

Query  65   LGVLRLMMKYDPHFFTFLEI-PEVLSIVDRVLSETAILHLQNGFILPSFPP-----FST-  117
               L  +    P   T + + P+ L    R+L +    H+  G I     P     F+  
Sbjct  66   TKRLSSLFHRSPRHMTEVVLQPQFLGAARRLLQQPT--HMWIGKIRMEVTPSVQVSFTQA  123

Query  118  ----PDVFQNAFHQDFPRVL---SGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPD  170
                P   +   H+D    L    G    + +M A++ FT   GATLV+PGSH   ++  
Sbjct  124  IRIDPGQGRQPLHRDDAMHLWRHPGPPCRLQLMLALNDFTSANGATLVIPGSHHWDDERA  183

Query  171  HTYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRAL  230
             TY    AVP    AGS  ++   ++H  G NT+   R +++        +Q+ +   A+
Sbjct  184  PTYA--EAVPAVMPAGSALLWPGGVYHGGGANTTDSPRYSLSVALDLGNLRQEENQYLAV  241

Query  231  GDAVVLEQPARTQQLLGW  248
                V+  P   Q+LLGW
Sbjct  242  PRETVMTLPEEVQRLLGW  259


>gi|302519381|ref|ZP_07271723.1| phytanoyl-CoA dioxygenase [Streptomyces sp. SPB78]
 gi|318056442|ref|ZP_07975165.1| hypothetical protein SSA3_00762 [Streptomyces sp. SA3_actG]
 gi|333026791|ref|ZP_08454855.1| putative phytanoyl-CoA dioxygenase [Streptomyces sp. Tu6071]
 gi|302428276|gb|EFL00092.1| phytanoyl-CoA dioxygenase [Streptomyces sp. SPB78]
 gi|332746643|gb|EGJ77084.1| putative phytanoyl-CoA dioxygenase [Streptomyces sp. Tu6071]
Length=293

 Score = 70.5 bits (171),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 68/258 (27%), Positives = 112/258 (44%), Gaps = 23/258 (8%)

Query  6    VENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRM-YRVQERILTEIGKERLARAGE  64
            V  +T LD+V   L   G  +VE+ +D A+LA  R+ +   ++    +E G +      +
Sbjct  7    VTPDTPLDEVVGILERQGAVIVEEFVDPATLAGLREDLGLGLETAGYSESGYD----GKK  62

Query  65   LGVLRLMMKYDPHFFTFLEI-PEVLSIVDRVLSETAILHLQNGFILPSFPP-----FST-  117
               L  +    P   T + + P+ L    R+L +    H+  G I     P     F+  
Sbjct  63   TKRLSSLFHRSPRHMTEVVLQPQFLGAARRLLQQPT--HMWIGKIRMEVTPSVQVSFTQA  120

Query  118  ----PDVFQNAFHQDFPRVL---SGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPD  170
                P   +   H+D    L    G    + +M A++ FT   GATLV+PGSH   ++  
Sbjct  121  IRIDPGQGRQPLHRDDAMHLWRHPGPPCRLQLMLALNDFTSANGATLVIPGSHHWDDERA  180

Query  171  HTYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRAL  230
             TY    AVP    AGS  ++   ++H  G NT+   R +++        +Q+ +   A+
Sbjct  181  PTYA--EAVPAVMPAGSALLWPGGVYHGGGANTTDSPRYSLSVALDLGNLRQEENQYLAV  238

Query  231  GDAVVLEQPARTQQLLGW  248
                V+  P   Q+LLGW
Sbjct  239  PRETVMTLPEEVQRLLGW  256


>gi|88706243|ref|ZP_01103950.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88699637|gb|EAQ96749.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length=315

 Score = 70.5 bits (171),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 54/174 (32%), Positives = 79/174 (46%), Gaps = 17/174 (9%)

Query  81   FLEIPEVLSIVDRVLSETAIL-HLQNGFILPSFP--PFSTPDVFQNAFHQDFPRVLSGYI  137
            F+  P +L+ +DR+L    +L   Q   IL   P  P  T D F       +P      +
Sbjct  122  FIVHPLILAHLDRLLKPNYLLSQAQVINILSGSPAQPLHTDDGF-------YPWPSPRPV  174

Query  138  ASVNIMFAIDPFTRDTGATLVVPGSHQRIEK---PDHTYLARNAVPVQCAAGSLFVFDST  194
             SV  +FAID FT D GAT+ +PGSH   E     D     +  +P    AGS  +F   
Sbjct  175  LSVATVFAIDDFTEDNGATVAIPGSHLWGEGRFPTDSDPRVKAVMP----AGSCILFLGN  230

Query  195  LWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
            LWH  G N SG+ R+A   Q+   + + Q +Y  ++            ++LLG+
Sbjct  231  LWHGGGENYSGESRMAFTGQYCEPYLRTQENYFLSVSKDTAAGVSEDMRRLLGY  284


>gi|154253118|ref|YP_001413942.1| phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
 gi|154157068|gb|ABS64285.1| Phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
Length=269

 Score = 70.5 bits (171),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 38/130 (30%), Positives = 69/130 (54%), Gaps = 5/130 (3%)

Query  140  VNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHAA  199
             N M+A+  FT + GAT ++PG+H+    P++     +++P +   GS+ ++  +LWH  
Sbjct  129  CNSMWALTDFTEENGATRIIPGTHKWDRSPEYG-THYDSIPAEMPKGSVLIWHGSLWHGG  187

Query  200  GRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW--YSRVVTNLD  257
            G N SG  R+ I   +   F +QQ +    L   +V     R Q+L G+  Y  ++ ++D
Sbjct  188  GANKSGARRVGIAMNYCAGFIRQQENQQLGLPLDLVKTFEPRLQELCGFGTYMNLIGHID  247

Query  258  EYYQPPDKRL  267
            +  + P +RL
Sbjct  248  K--KTPAQRL  255


>gi|212539396|ref|XP_002149853.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210067152|gb|EEA21244.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
Length=303

 Score = 70.1 bits (170),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 47/177 (27%), Positives = 87/177 (50%), Gaps = 18/177 (10%)

Query  78   FFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFS--TPDVFQNAFHQD----FPR  131
            F  F+  P+VL++ D  L          G+++ +F   S  + +  Q   H D     PR
Sbjct  102  FDKFVSHPDVLALNDYFLDP--------GYLINAFHSISIQSGEKHQILHHDDGHVTVPR  153

Query  132  VLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVF  191
              + +     +M A+D FT   G+T+VVP SH  +   +       A P+   +GS+  F
Sbjct  154  PHAPF--GTGVMVALDAFTETNGSTVVVPKSH--LWNSNRWPAQNEAFPIVMESGSMVYF  209

Query  192  DSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
             STLWH  G N SG++R+++N Q+ + + +   +++ A+    + + P +   ++G+
Sbjct  210  LSTLWHGGGENNSGEERISLNMQYCQPWIRPFENHILAVSWEKLSQIPPKIVDMMGY  266


>gi|154250668|ref|YP_001411492.1| phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
 gi|154154618|gb|ABS61835.1| Phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
Length=315

 Score = 69.7 bits (169),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 57/232 (25%), Positives = 98/232 (43%), Gaps = 18/232 (7%)

Query  23   GYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLMMKYDPHFFTFL  82
            GY + E+V++   ++  R+ + RV+                 + +  L+     H  TF 
Sbjct  51   GYVIFENVIEPELVSEIREELLRVERDNNMGFRDTDFEGKQTVRIYNLLA----HGPTFW  106

Query  83   EIP---EVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQD---FPRVLSGY  136
            +IP     L   ++VL E   +   +   L        P       H D    P      
Sbjct  107  KIPIHEATLPFAEKVLDEELQVSSVSSITL-------CPGQGAQPLHADDQLIPVPKPHQ  159

Query  137  IASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLW  196
              ++N ++AI  FT + GAT +VPGSH+    PD+  +  + V  +  AGS+  +  +LW
Sbjct  160  PFTLNCVWAISDFTEENGATRLVPGSHKASGMPDYD-MEMDTVAGEMPAGSVLFWHGSLW  218

Query  197  HAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW  248
            HA G N S + R  + + +   F +QQ +    +      + P R Q+L G+
Sbjct  219  HAGGNNRSKERRFCVANYYCAGFIRQQENQQLGIPLEEARKFPRRLQELCGY  270


>gi|311104573|ref|YP_003977426.1| phytanoyl-CoA dioxygenase [Achromobacter xylosoxidans A8]
 gi|310759262|gb|ADP14711.1| phytanoyl-CoA dioxygenase PhyH family protein 3 [Achromobacter 
xylosoxidans A8]
Length=282

 Score = 69.7 bits (169),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 61/243 (26%), Positives = 106/243 (44%), Gaps = 17/243 (6%)

Query  12   LDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGV-LRL  70
            LD+   A    G+ V+  ++    ++  ++ + R++      +G  + +  G   V +  
Sbjct  7    LDERIAAFERDGFVVLPGIIPPEQVSQLQEALIRIEAE--HNLGYAQTSFEGRKTVRINN  64

Query  71   MMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQD--  128
            ++ YDP F+     PEVL++ +R+L    +L                P       H+D  
Sbjct  65   LLVYDPCFWDVPLQPEVLALAERLLDRELLLSSLCSLT-------LAPGQGAQPLHEDTQ  117

Query  129  ---FPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAA  185
                PR       +VN ++A+  FT + GAT +VPGSH+    P +             A
Sbjct  118  QLALPRPRPPL--AVNAIWALSDFTAENGATHIVPGSHRYDSSPPYGAQDIETAQATMKA  175

Query  186  GSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQL  245
            GS+ +FDS LWH  G N S   R A++  +   + +QQ +    +   +V   P R Q+L
Sbjct  176  GSVMLFDSALWHKGGANNSNARRYALSCYYCAGWIRQQENLQLGIPADMVRRFPRRLQEL  235

Query  246  LGW  248
             G+
Sbjct  236  CGY  238


>gi|167578415|ref|ZP_02371289.1| MmcH, putative [Burkholderia thailandensis TXDOH]
Length=256

 Score = 69.7 bits (169),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 69/246 (29%), Positives = 108/246 (44%), Gaps = 28/246 (11%)

Query  12   LDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGK-ER---LARAGELGV  67
            +D V + +   G+ V+E +L        R+  YRV+  ILT++ + ER   L  +G   +
Sbjct  17   IDNVLEQVRETGFCVIESLL-------PREFTYRVRG-ILTKLQRIERHRNLQPSGHQRI  68

Query  68   LRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQ  127
            L L++K D  F   L  P VL+I  R L +  +        L        P   +  +H 
Sbjct  69   LHLLIK-DAIFSELLCHPLVLAIWRRQLGDDMVCSTMTANAL-------LPGSTEQYWHA  120

Query  128  DFP-----RVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTY-LARNAVPV  181
            D+P     +    +  S  +++ ID FT + G T  + GSH+R   PD       +A  +
Sbjct  121  DYPYWTMQQPYPVFPLSGQVIWMIDAFTEENGGTAGIAGSHRRGHLPDMGRDWCDDATIL  180

Query  182  QCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPAR  241
              + GS  + D   WH +  N S + R A+   + RS+   Q D    L  A + E    
Sbjct  181  TGSPGSAVIADGAWWHTSRPNRSRRTRYAVLASYIRSYCVTQEDMSMQL--AAIPEPSPL  238

Query  242  TQQLLG  247
             QQLLG
Sbjct  239  VQQLLG  244


>gi|254821154|ref|ZP_05226155.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium 
intracellulare ATCC 13950]
Length=287

 Score = 69.7 bits (169),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 57/185 (31%), Positives = 88/185 (48%), Gaps = 20/185 (10%)

Query  81   FLEIPEVLSIVDRVLSETAILH-LQNGFILPSFPPFSTPDVFQNAFHQD----FPRVLSG  135
             ++ P VL+ +DR+L    +L  LQ   I P        +  Q A H D     PR  + 
Sbjct  101  LVDHPRVLAALDRLLMPNYLLSALQAINIQPG-------EAAQLAHHDDGFYPIPRPRAP  153

Query  136  YIASVNIMFAIDPFTRDTGATLVVPGSHQRIEK-PDHTYLARNAVPVQCAAGSLFVFDST  194
              A+   ++AID FT D GAT++ PGSH+  ++ PD       A+PV   AGS   F  T
Sbjct  154  LAAAT--IWAIDDFTADNGATVLYPGSHRWGKRRPDSD---DEALPVVMPAGSCVFFVGT  208

Query  195  LWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW--YSRV  252
            LWH  G N +  +RLAI  Q+   + +    Y  ++   +        +++LG+  +   
Sbjct  209  LWHGGGANNTAHERLAITAQYCEPWLRPMEAYTLSVSRDIARTVSDDIRRMLGYSIHPPF  268

Query  253  VTNLD  257
            V N+D
Sbjct  269  VGNVD  273


>gi|339296446|gb|AEJ48557.1| hypothetical protein CCDC5079_3368 [Mycobacterium tuberculosis 
CCDC5079]
Length=217

 Score = 69.3 bits (168),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 41/126 (33%), Positives = 66/126 (53%), Gaps = 6/126 (4%)

Query  140  VNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHAA  199
             N + A+  FT D GAT VVPGSH+  E+P   Y      PV+  AG   +++ +LWH A
Sbjct  71   CNALIALCDFTADNGATQVVPGSHRWPERPSPPY--PEGKPVEINAGDALIWNGSLWHTA  128

Query  200  GRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPARTQQLLGW--YSRVVTNLD  257
              N +   R A+   F   F +QQ++   ++   +V     R Q+L+G+  Y+  +  +D
Sbjct  129  AANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRID  188

Query  258  EYYQPP  263
              ++PP
Sbjct  189  --WRPP  192



Lambda     K      H
   0.323    0.138    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 426144143792


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40