BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1504c
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
gi|289442954|ref|ZP_06432698.1| TDP-4-oxo-6-deoxy-D-glucose tran... 411 4e-113
gi|31792701|ref|NP_855194.1| TDP-4-oxo-6-deoxy-D-glucose transam... 410 4e-113
gi|15608642|ref|NP_216020.1| hypothetical protein Rv1504c [Mycob... 410 7e-113
gi|339631574|ref|YP_004723216.1| hypothetical protein MAF_15290 ... 409 9e-113
gi|289574187|ref|ZP_06454414.1| TDP-4-oxo-6-deoxy-D-glucose tran... 384 3e-105
gi|183982333|ref|YP_001850624.1| pyridoxal phosphate-dependent e... 369 1e-100
gi|288941513|ref|YP_003443753.1| TDP-4-keto-6-deoxy-D-glucose tr... 309 1e-82
gi|104779538|ref|YP_606036.1| TDP-4-oxo-6-deoxy-D-glucose transa... 309 1e-82
gi|30250101|ref|NP_842171.1| TDP-4-oxo-6-deoxy-D-glucose transam... 309 1e-82
gi|344338823|ref|ZP_08769754.1| TDP-4-keto-6-deoxy-D-glucose tra... 307 5e-82
gi|82701422|ref|YP_410988.1| TDP-4-oxo-6-deoxy-D-glucose transam... 305 3e-81
gi|237653914|ref|YP_002890228.1| TDP-4-oxo-6-deoxy-D-glucose tra... 301 3e-80
gi|119898966|ref|YP_934179.1| TDP-4-oxo-6-deoxy-D-glucose transa... 300 6e-80
gi|330808316|ref|YP_004352778.1| dTDP-4-keto-6-deoxy-D-glucose a... 297 5e-79
gi|322419927|ref|YP_004199150.1| TDP-4-keto-6-deoxy-D-glucose tr... 295 2e-78
gi|333894120|ref|YP_004467995.1| TDP-4-oxo-6-deoxy-D-glucose tra... 290 1e-76
gi|116250565|ref|YP_766403.1| TDP-4-oxo-6-deoxy-D-glucose transa... 283 1e-74
gi|254283358|ref|ZP_04958326.1| DegT/DnrJ/EryC1/StrS aminotransf... 282 2e-74
gi|254515910|ref|ZP_05127970.1| aminotransferase [gamma proteoba... 280 1e-73
gi|288573525|ref|ZP_06391882.1| TDP-4-keto-6-deoxy-D-glucose tra... 277 6e-73
gi|300721434|ref|YP_003710705.1| TDP-4-oxo-6-deoxy-D-glucose tra... 277 7e-73
gi|237751030|ref|ZP_04581510.1| TDP-4-oxo-6-deoxy-D-glucose tran... 276 8e-73
gi|237727912|ref|ZP_04558393.1| lipopolysaccharide biosynthesis ... 275 2e-72
gi|53729207|ref|ZP_00348343.1| COG0399: Predicted pyridoxal phos... 275 3e-72
gi|238759804|ref|ZP_04620961.1| Lipopolysaccharide biosynthesis ... 274 4e-72
gi|329297887|ref|ZP_08255223.1| TDP-4-oxo-6-deoxy-D-glucose tran... 274 4e-72
gi|197287136|ref|YP_002153008.1| TDP-4-oxo-6-deoxy-D-glucose tra... 274 5e-72
gi|253690365|ref|YP_003019555.1| TDP-4-keto-6-deoxy-D-glucose tr... 274 6e-72
gi|152993136|ref|YP_001358857.1| TDP-4-oxo-6-deoxy-D-glucose tra... 273 1e-71
gi|162421595|ref|YP_001605116.1| TDP-4-oxo-6-deoxy-D-glucose tra... 273 1e-71
gi|336122975|ref|YP_004565023.1| dTDP-4-dehydro-6-deoxy-D-glucos... 273 1e-71
gi|21957054|gb|AAM83958.1|AE013637_8 putative regulator [Yersini... 273 1e-71
gi|190150880|ref|YP_001969405.1| TDP-4-keto-6-deoxy-D-glucose tr... 273 1e-71
gi|37197229|dbj|BAC93069.1| lipopolysaccharide biosynthesis prot... 273 1e-71
gi|50123124|ref|YP_052291.1| TDP-4-oxo-6-deoxy-D-glucose transam... 273 1e-71
gi|307246470|ref|ZP_07528542.1| Lipopolysaccharide biosynthesis ... 272 2e-71
gi|227114344|ref|ZP_03828000.1| TDP-4-oxo-6-deoxy-D-glucose tran... 272 2e-71
gi|114776260|ref|ZP_01451305.1| DegT/DnrJ/EryC1/StrS family prot... 272 2e-71
gi|238798903|ref|ZP_04642369.1| Lipopolysaccharide biosynthesis ... 272 2e-71
gi|283834559|ref|ZP_06354300.1| lipopolysaccharide biosynthesis ... 272 2e-71
gi|320088340|emb|CBY98100.1| UDP-4-amino-4-deoxy-L-arabinose-oxo... 272 2e-71
gi|227325826|ref|ZP_03829850.1| TDP-4-oxo-6-deoxy-D-glucose tran... 272 2e-71
gi|56459654|ref|YP_154935.1| TDP-4-oxo-6-deoxy-D-glucose transam... 272 2e-71
gi|261823421|ref|YP_003261527.1| TDP-4-oxo-6-deoxy-D-glucose tra... 272 2e-71
gi|296132030|ref|YP_003639277.1| TDP-4-keto-6-deoxy-D-glucose tr... 272 2e-71
gi|213615699|ref|ZP_03371525.1| TDP-4-oxo-6-deoxy-D-glucose tran... 271 3e-71
gi|297518744|ref|ZP_06937130.1| TDP-4-oxo-6-deoxy-D-glucose tran... 271 3e-71
gi|283787527|ref|YP_003367392.1| dTDP-4-oxo-6-deoxy-D-glucose tr... 271 3e-71
gi|334126161|ref|ZP_08500140.1| lipopolysaccharide biosynthesis ... 271 4e-71
gi|302671905|ref|YP_003831865.1| TDP-4-keto-6-deoxy-D-glucose tr... 271 4e-71
>gi|289442954|ref|ZP_06432698.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Mycobacterium tuberculosis
T46]
gi|289447109|ref|ZP_06436853.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Mycobacterium tuberculosis
CPHL_A]
gi|289569532|ref|ZP_06449759.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
7 more sequence titles
Length=382
Score = 411 bits (1056), Expect = 4e-113, Method: Compositional matrix adjust.
Identities = 198/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 1 VSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
+SDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT
Sbjct 1 MSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
Query 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI
Sbjct 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
Query 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS
Sbjct 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
Query 181 FHETKNVISGEGGALLVNS 199
FHETKNVISGEGGALLVNS
Sbjct 181 FHETKNVISGEGGALLVNS 199
>gi|31792701|ref|NP_855194.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Mycobacterium bovis
AF2122/97]
gi|121637436|ref|YP_977659.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224989911|ref|YP_002644598.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|31618291|emb|CAD96209.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493083|emb|CAL71554.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773024|dbj|BAH25830.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|341601455|emb|CCC64128.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=382
Score = 410 bits (1055), Expect = 4e-113, Method: Compositional matrix adjust.
Identities = 198/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 1 VSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
+SDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT
Sbjct 1 MSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
Query 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI
Sbjct 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
Query 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS
Sbjct 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
Query 181 FHETKNVISGEGGALLVNS 199
FHETKNVISGEGGALLVNS
Sbjct 181 FHETKNVISGEGGALLVNS 199
>gi|15608642|ref|NP_216020.1| hypothetical protein Rv1504c [Mycobacterium tuberculosis H37Rv]
gi|148661299|ref|YP_001282822.1| hypothetical protein MRA_1515 [Mycobacterium tuberculosis H37Ra]
gi|148822726|ref|YP_001287480.1| hypothetical protein TBFG_11535 [Mycobacterium tuberculosis F11]
29 more sequence titles
Length=199
Score = 410 bits (1053), Expect = 7e-113, Method: Compositional matrix adjust.
Identities = 198/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 1 VSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
+SDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT
Sbjct 1 MSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
Query 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI
Sbjct 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
Query 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS
Sbjct 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
Query 181 FHETKNVISGEGGALLVNS 199
FHETKNVISGEGGALLVNS
Sbjct 181 FHETKNVISGEGGALLVNS 199
>gi|339631574|ref|YP_004723216.1| hypothetical protein MAF_15290 [Mycobacterium africanum GM041182]
gi|340626521|ref|YP_004744973.1| hypothetical protein MCAN_15231 [Mycobacterium canettii CIPT
140010059]
gi|339330930|emb|CCC26601.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
gi|340004711|emb|CCC43855.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=200
Score = 409 bits (1052), Expect = 9e-113, Method: Compositional matrix adjust.
Identities = 198/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 1 VSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
+SDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT
Sbjct 1 MSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
Query 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI
Sbjct 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
Query 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS
Sbjct 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
Query 181 FHETKNVISGEGGALLVNS 199
FHETKNVISGEGGALLVNS
Sbjct 181 FHETKNVISGEGGALLVNS 199
>gi|289574187|ref|ZP_06454414.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Mycobacterium tuberculosis
K85]
gi|289538618|gb|EFD43196.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Mycobacterium tuberculosis
K85]
Length=370
Score = 384 bits (987), Expect = 3e-105, Method: Compositional matrix adjust.
Identities = 187/187 (100%), Positives = 187/187 (100%), Gaps = 0/187 (0%)
Query 13 MTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEMMALLLDI 72
MTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEMMALLLDI
Sbjct 1 MTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEMMALLLDI 60
Query 73 EEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTKAIVPVHY 132
EEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTKAIVPVHY
Sbjct 61 EEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTKAIVPVHY 120
Query 133 AGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETKNVISGEG 192
AGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETKNVISGEG
Sbjct 121 AGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETKNVISGEG 180
Query 193 GALLVNS 199
GALLVNS
Sbjct 181 GALLVNS 187
>gi|183982333|ref|YP_001850624.1| pyridoxal phosphate-dependent enzyme, WecE [Mycobacterium marinum
M]
gi|183175659|gb|ACC40769.1| pyridoxal phosphate-dependent enzyme, WecE [Mycobacterium marinum
M]
Length=382
Score = 369 bits (947), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 177/197 (90%), Positives = 184/197 (94%), Gaps = 0/197 (0%)
Query 3 DHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAA 62
+HK+PFNRPYMTG+EL YIAEAHSCGHLAGDGPFT R HAWLEQQTGCRKALLTPSCTAA
Sbjct 3 EHKIPFNRPYMTGQELNYIAEAHSCGHLAGDGPFTYRCHAWLEQQTGCRKALLTPSCTAA 62
Query 63 LEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITP 122
LEMMALLL+IEEGDEVILPS+TFVSTANAFVLRGGVPVFVDIRPDTLN+DET I AITP
Sbjct 63 LEMMALLLEIEEGDEVILPSFTFVSTANAFVLRGGVPVFVDIRPDTLNVDETLIEAAITP 122
Query 123 RTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFH 182
RT+AIVPVHYAGVACEMD IM IA H LAVVEDAAQG MA YRGRALGSIGDLGALSFH
Sbjct 123 RTRAIVPVHYAGVACEMDTIMSIARRHKLAVVEDAAQGTMAYYRGRALGSIGDLGALSFH 182
Query 183 ETKNVISGEGGALLVNS 199
ETKNVISGEGGALLVNS
Sbjct 183 ETKNVISGEGGALLVNS 199
>gi|288941513|ref|YP_003443753.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Allochromatium vinosum
DSM 180]
gi|288896885|gb|ADC62721.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Allochromatium vinosum
DSM 180]
Length=381
Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/195 (77%), Positives = 167/195 (86%), Gaps = 0/195 (0%)
Query 5 KVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALE 64
+PFN+PYMTG+EL YIA+AH+ GHLAGDG FT++ WLE +TG KALLT SCTAALE
Sbjct 2 NIPFNKPYMTGKELWYIAQAHANGHLAGDGQFTKQCSIWLEARTGASKALLTHSCTAALE 61
Query 65 MMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRT 124
M A+L D++ GDEVI+PSYTFVSTANAFVLRG VPVFVDIRPDTLNIDET I AIT RT
Sbjct 62 MAAILADLQPGDEVIMPSYTFVSTANAFVLRGAVPVFVDIRPDTLNIDETLIEAAITERT 121
Query 125 KAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHET 184
KAIVPVHYAGV CEMD IM+IA H L V+EDAAQG MASY+GRALGSIG LG LSFHET
Sbjct 122 KAIVPVHYAGVGCEMDTIMEIARRHGLLVIEDAAQGVMASYKGRALGSIGHLGCLSFHET 181
Query 185 KNVISGEGGALLVNS 199
KN+ISGEGGALL+N+
Sbjct 182 KNIISGEGGALLINA 196
>gi|104779538|ref|YP_606036.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Pseudomonas entomophila
L48]
gi|95108525|emb|CAK13219.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Pseudomonas entomophila
L48]
Length=381
Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/198 (77%), Positives = 169/198 (86%), Gaps = 0/198 (0%)
Query 1 VSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
+S ++PFNRP+MTG+E YIAEA+ LAGDGPFT+R H WLE++TGC KALLT SCT
Sbjct 1 MSFDQIPFNRPHMTGKEFHYIAEANFGHMLAGDGPFTKRCHTWLEERTGCGKALLTHSCT 60
Query 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
AALEM ALLLD++ GDEVI+PSYTFVSTANAFVLRG +PVFVDIR DTLN+DET I AI
Sbjct 61 AALEMSALLLDLQPGDEVIMPSYTFVSTANAFVLRGAIPVFVDIREDTLNLDETLIEAAI 120
Query 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
TPRTKAI VHYAGV+CEMD IM IA H L VVEDAAQG M++Y+GRALGSIGDLGA S
Sbjct 121 TPRTKAIAVVHYAGVSCEMDTIMAIARKHGLRVVEDAAQGVMSTYKGRALGSIGDLGAFS 180
Query 181 FHETKNVISGEGGALLVN 198
FHETKNVISGEGGALLVN
Sbjct 181 FHETKNVISGEGGALLVN 198
>gi|30250101|ref|NP_842171.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Nitrosomonas europaea
ATCC 19718]
gi|30139208|emb|CAD86078.1| DegT/DnrJ/EryC1/StrS family [Nitrosomonas europaea ATCC 19718]
Length=381
Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/198 (79%), Positives = 173/198 (88%), Gaps = 0/198 (0%)
Query 2 SDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTA 61
++H++PFN P+MTG+EL YIAEAH G LAGDGPFT+R HAWLE++TGC K LLT SCTA
Sbjct 4 TNHRIPFNWPHMTGKELYYIAEAHFNGSLAGDGPFTKRCHAWLEERTGCNKGLLTHSCTA 63
Query 62 ALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAIT 121
ALEM ALLLDI+ GDEVI+PSYTFVSTANAFVLRGGVPVFVDIR DTLN+DE I AIT
Sbjct 64 ALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGGVPVFVDIREDTLNLDERLIESAIT 123
Query 122 PRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSF 181
PRT+AI PVHYAGVACEMD IM IA H L VVEDAAQG M++Y+GRALGSIGDLGA SF
Sbjct 124 PRTRAIAPVHYAGVACEMDTIMAIAQKHELKVVEDAAQGVMSTYKGRALGSIGDLGAYSF 183
Query 182 HETKNVISGEGGALLVNS 199
HETKNVISGEGGALLVN+
Sbjct 184 HETKNVISGEGGALLVNT 201
>gi|344338823|ref|ZP_08769754.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Thiocapsa marina 5811]
gi|343801405|gb|EGV19348.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Thiocapsa marina 5811]
Length=377
Score = 307 bits (787), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 144/193 (75%), Positives = 165/193 (86%), Gaps = 0/193 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFNRP++ G+EL YIA+AH+ G +AGDG FT++S AWLEQ+TGCRKALLT SCTAALEM
Sbjct 2 IPFNRPHLVGKELWYIAQAHAKGQMAGDGSFTKQSQAWLEQRTGCRKALLTHSCTAALEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+L DI+ GDEVILPSYTFVSTANAFVLRG VPVFVDIRPDTLN+DE I AITPRT+
Sbjct 62 AAILADIQPGDEVILPSYTFVSTANAFVLRGAVPVFVDIRPDTLNLDERLIESAITPRTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
A+VPVHY GV C MD I+ +A H L V+EDAAQG MASY+GR LGSIG LG LSFHETK
Sbjct 122 AVVPVHYGGVGCAMDVILNLAERHGLLVIEDAAQGVMASYQGRPLGSIGHLGTLSFHETK 181
Query 186 NVISGEGGALLVN 198
N+ISGEGGALL+N
Sbjct 182 NIISGEGGALLIN 194
>gi|82701422|ref|YP_410988.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Nitrosospira multiformis
ATCC 25196]
gi|82409487|gb|ABB73596.1| DegT/DnrJ/EryC1/StrS aminotransferase [Nitrosospira multiformis
ATCC 25196]
Length=374
Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/194 (75%), Positives = 167/194 (87%), Gaps = 0/194 (0%)
Query 5 KVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALE 64
++PFN+PYMTG+EL Y+++AH+ GHLAGDG FT++ +AWLE++ GC+KALLT SCTAALE
Sbjct 2 QIPFNKPYMTGKELWYVSQAHANGHLAGDGVFTKKCNAWLERRIGCKKALLTHSCTAALE 61
Query 65 MMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRT 124
M A+L I GDEVI+PSYTFVSTANAF LRGGVPVFVDIRPDT NIDET I AITP+T
Sbjct 62 MAAILAQIGPGDEVIMPSYTFVSTANAFALRGGVPVFVDIRPDTFNIDETLIEAAITPKT 121
Query 125 KAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHET 184
KAIV VHYAGV CEMDAIM IA + L V+EDAAQG M++Y+GR LGSIG L ALSFHET
Sbjct 122 KAIVAVHYAGVGCEMDAIMSIAERYGLFVIEDAAQGLMSTYKGRPLGSIGHLAALSFHET 181
Query 185 KNVISGEGGALLVN 198
KN+ISGEGGALLVN
Sbjct 182 KNIISGEGGALLVN 195
>gi|237653914|ref|YP_002890228.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Thauera sp. MZ1T]
gi|237625161|gb|ACR01851.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Thauera sp. MZ1T]
Length=374
Score = 301 bits (772), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/195 (75%), Positives = 166/195 (86%), Gaps = 0/195 (0%)
Query 5 KVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALE 64
+PFN+P+MTG+EL YIA+AH+ GHLAGDG FTR+ WLE +TG KALLT SCTAALE
Sbjct 2 NIPFNKPHMTGKELWYIAQAHANGHLAGDGNFTRQCSRWLEARTGASKALLTHSCTAALE 61
Query 65 MMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRT 124
M A+L D+E GDEVI+P+YTFVSTANAFVLRG VPVFVD+RPDTLNIDE I AIT RT
Sbjct 62 MAAILADLEPGDEVIMPAYTFVSTANAFVLRGAVPVFVDVRPDTLNIDERLIEAAITART 121
Query 125 KAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHET 184
+AIVPVHYAGVACEMD IM IA H+L VVEDAAQ MASY+GR LG+IG +GALSFHET
Sbjct 122 RAIVPVHYAGVACEMDTIMDIARRHDLLVVEDAAQAVMASYKGRPLGAIGHMGALSFHET 181
Query 185 KNVISGEGGALLVNS 199
KN+ISGEGGALLVN+
Sbjct 182 KNIISGEGGALLVNA 196
>gi|119898966|ref|YP_934179.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Azoarcus sp. BH72]
gi|119671379|emb|CAL95292.1| aminotransferase [Azoarcus sp. BH72]
Length=380
Score = 300 bits (769), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 151/199 (76%), Positives = 169/199 (85%), Gaps = 0/199 (0%)
Query 1 VSDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCT 60
+ + K+PFN PYMTG+EL YIAEAH G LAGDGPFT+R H WLE++TGC K LLT SCT
Sbjct 2 LEEKKIPFNWPYMTGKELYYIAEAHFNGRLAGDGPFTKRCHRWLEERTGCNKGLLTHSCT 61
Query 61 AALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAI 120
AALEM ALLLDI+ GDE+I+PSYTFVSTANAFVLRGGVPVFVDIR D+LN+DE I AI
Sbjct 62 AALEMAALLLDIQPGDEIIMPSYTFVSTANAFVLRGGVPVFVDIREDSLNLDERLIESAI 121
Query 121 TPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALS 180
TPRT+AI PVHYAGVACEMD IM +A H L VVEDAAQG M++Y+GR LGSIGDLG S
Sbjct 122 TPRTRAIAPVHYAGVACEMDTIMIMAREHGLKVVEDAAQGVMSTYKGRPLGSIGDLGVYS 181
Query 181 FHETKNVISGEGGALLVNS 199
FHETKN+ISGEGGALLVNS
Sbjct 182 FHETKNLISGEGGALLVNS 200
>gi|330808316|ref|YP_004352778.1| dTDP-4-keto-6-deoxy-D-glucose aminotransferase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327376424|gb|AEA67774.1| putative dTDP-4-keto-6-deoxy-D-glucose aminotransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length=378
Score = 297 bits (761), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/196 (79%), Positives = 168/196 (86%), Gaps = 0/196 (0%)
Query 4 HKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAAL 63
K+ FNRP+MTG+EL YIAEA S LAGDGPFT+R H WLE ++GC ALLT SCTAAL
Sbjct 3 QKIQFNRPFMTGKELHYIAEAKSGNMLAGDGPFTKRCHEWLESRSGCDTALLTHSCTAAL 62
Query 64 EMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPR 123
EM ALLL+IE GDEVI+PSYTFVSTANAFVLRGGVPVF+DIR DTLN+DE+ I AIT R
Sbjct 63 EMAALLLNIEPGDEVIMPSYTFVSTANAFVLRGGVPVFIDIREDTLNLDESLIESAITAR 122
Query 124 TKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHE 183
T+AIVPVHYAGVACEMD IM IA H+L VVEDAAQG MA+Y+GRALGSIGDLGA SFHE
Sbjct 123 TRAIVPVHYAGVACEMDTIMDIAKRHDLRVVEDAAQGVMATYKGRALGSIGDLGAYSFHE 182
Query 184 TKNVISGEGGALLVNS 199
TKNVISGEGGALLVN
Sbjct 183 TKNVISGEGGALLVNE 198
>gi|322419927|ref|YP_004199150.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Geobacter sp. M18]
gi|320126314|gb|ADW13874.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Geobacter sp. M18]
Length=378
Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/193 (73%), Positives = 163/193 (85%), Gaps = 0/193 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN+P+MTG+EL I++AH G L+GDGPFT++ H W E++ GCRKALLT SCTAALEM
Sbjct 2 IPFNKPHMTGKELWNISQAHHYGQLSGDGPFTQKCHKWFERELGCRKALLTHSCTAALEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+L DI+ GDEVI+PSYTFVSTA+AFVLRGGVPVFVDIR DTLN+DE +I AIT RT
Sbjct 62 AAILADIKPGDEVIMPSYTFVSTADAFVLRGGVPVFVDIREDTLNLDERKIEAAITDRTV 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGV CEMD IM+IA +NL V+EDAAQG MA Y+GR LG+IG LG LSFHETK
Sbjct 122 AIVPVHYAGVGCEMDVIMEIAGRYNLLVIEDAAQGLMARYKGRHLGTIGHLGTLSFHETK 181
Query 186 NVISGEGGALLVN 198
N+ SGEGGALL+N
Sbjct 182 NITSGEGGALLIN 194
>gi|333894120|ref|YP_004467995.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Alteromonas sp. SN2]
gi|332994138|gb|AEF04193.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Alteromonas sp. SN2]
Length=381
Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/194 (70%), Positives = 161/194 (83%), Gaps = 0/194 (0%)
Query 5 KVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALE 64
K+PFN P+MTG+EL IAE+H G LAGDGPFT++ H WLE +ALLT SCTA+LE
Sbjct 2 KIPFNWPHMTGKELYNIAESHFNGRLAGDGPFTKKCHDWLEVNGHTHRALLTNSCTASLE 61
Query 65 MMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRT 124
M ALLLD++ GDE+I+PSYTFVSTANAFVLRG PVFVDIR DTLN+DET+I AIT +T
Sbjct 62 MSALLLDVKAGDEIIMPSYTFVSTANAFVLRGATPVFVDIRQDTLNLDETKIERAITNKT 121
Query 125 KAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHET 184
+AIVPVHYAGV CEMD+I+ A H+ L+V+EDAAQG MA+Y+G+ LGS+G LGA SFHET
Sbjct 122 RAIVPVHYAGVGCEMDSILDTAGHYGLSVIEDAAQGLMATYKGKPLGSLGKLGAFSFHET 181
Query 185 KNVISGEGGALLVN 198
KN+ISGEGGAL VN
Sbjct 182 KNIISGEGGALFVN 195
>gi|116250565|ref|YP_766403.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Rhizobium leguminosarum
bv. viciae 3841]
gi|115255213|emb|CAK06288.1| putative lipopolysaccharide biosynthesis protein [Rhizobium leguminosarum
bv. viciae 3841]
Length=371
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/186 (79%), Positives = 160/186 (87%), Gaps = 0/186 (0%)
Query 13 MTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEMMALLLDI 72
MTG+EL YIAEA LAGDGPFT+R H WLEQ +GC K+LLT SCTAALEM ALLLDI
Sbjct 1 MTGKELYYIAEAKFGNMLAGDGPFTKRCHEWLEQTSGCNKSLLTHSCTAALEMAALLLDI 60
Query 73 EEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTKAIVPVHY 132
+ GDE+I+PSYTFVSTANAFVLRGGVPVFVDIR DTLN+DE+ I AITPRT+AIVPVHY
Sbjct 61 QPGDEIIMPSYTFVSTANAFVLRGGVPVFVDIREDTLNLDESLIEAAITPRTRAIVPVHY 120
Query 133 AGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETKNVISGEG 192
AGVACEMD IM+IA H L VVEDAAQG MA+Y+GR +GSIGDL A SFHETKNVISGEG
Sbjct 121 AGVACEMDTIMRIAKQHGLKVVEDAAQGVMAAYKGRPIGSIGDLAAYSFHETKNVISGEG 180
Query 193 GALLVN 198
GALLVN
Sbjct 181 GALLVN 186
>gi|254283358|ref|ZP_04958326.1| DegT/DnrJ/EryC1/StrS aminotransferase [gamma proteobacterium
NOR51-B]
gi|219679561|gb|EED35910.1| DegT/DnrJ/EryC1/StrS aminotransferase [gamma proteobacterium
NOR51-B]
Length=375
Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/191 (71%), Positives = 156/191 (82%), Gaps = 0/191 (0%)
Query 8 FNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEMMA 67
FN+PY+ G EL IA+AH+ G +AGDGPFT++ WLEQ TGC+KALLT SCTAALEM A
Sbjct 5 FNKPYLCGEELRNIAQAHANGQIAGDGPFTKKCQTWLEQVTGCKKALLTHSCTAALEMAA 64
Query 68 LLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTKAI 127
+L DI+ GDEVI+PSYTFVSTANAFV+RG VPVFVD+R +T N+DE I +ITPRT+AI
Sbjct 65 ILADIKPGDEVIMPSYTFVSTANAFVIRGAVPVFVDVRAETFNLDERLIEPSITPRTRAI 124
Query 128 VPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETKNV 187
VPVHYAGV C M+ IM IA H L V+EDAAQG MASY R LG+IG LGA SFHETKN+
Sbjct 125 VPVHYAGVGCNMNVIMAIAERHGLLVIEDAAQGVMASYVDRPLGAIGHLGAFSFHETKNI 184
Query 188 ISGEGGALLVN 198
I+GEGGALLVN
Sbjct 185 IAGEGGALLVN 195
>gi|254515910|ref|ZP_05127970.1| aminotransferase [gamma proteobacterium NOR5-3]
gi|219675632|gb|EED31998.1| aminotransferase [gamma proteobacterium NOR5-3]
Length=378
Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/193 (75%), Positives = 163/193 (85%), Gaps = 0/193 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN+PYMTG+EL+YIA+AH G LAGDGP+TRR H W+E+Q+ C KALLT SCTAALEM
Sbjct 3 LPFNKPYMTGKELSYIADAHFNGQLAGDGPYTRRCHQWIEEQSLCEKALLTHSCTAALEM 62
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALLL++E GDEVI+PSYTFVSTANAF LR VPVFVDIR DTLNIDE +I AIT +TK
Sbjct 63 AALLLNLEPGDEVIMPSYTFVSTANAFALRKAVPVFVDIRLDTLNIDEQKIEAAITEKTK 122
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGV CEMD IM A + VVEDAAQG ++SY+GRALGSIG LGA SFHETK
Sbjct 123 AIVPVHYAGVGCEMDTIMSTAERLGIKVVEDAAQGVLSSYKGRALGSIGHLGAYSFHETK 182
Query 186 NVISGEGGALLVN 198
N+ISGEGGALL+N
Sbjct 183 NIISGEGGALLIN 195
>gi|288573525|ref|ZP_06391882.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569266|gb|EFC90823.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Dethiosulfovibrio
peptidovorans DSM 11002]
Length=376
Score = 277 bits (709), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 131/193 (68%), Positives = 153/193 (80%), Gaps = 0/193 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN+PY TG+EL YI + AG+G F+++ WLE++TGC KA+LTPS TAALEM
Sbjct 3 IPFNKPYTTGKELGYIQQVIESERFAGNGTFSKKCAKWLEEKTGCLKAILTPSGTAALEM 62
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
M +L DI GDEVI+PS+TF STANA VLRG PVFVDIRPDTLNIDET I AITPRTK
Sbjct 63 MMILADIGPGDEVIMPSFTFSSTANAVVLRGATPVFVDIRPDTLNIDETLIESAITPRTK 122
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AI PVHYAGV CEMD I++IA H L V+EDAAQG +ASY+ R LGSIG +GALSFHETK
Sbjct 123 AIAPVHYAGVGCEMDVILEIAERHGLLVLEDAAQGILASYKNRPLGSIGQMGALSFHETK 182
Query 186 NVISGEGGALLVN 198
N+ GEGGALL+N
Sbjct 183 NIHCGEGGALLIN 195
>gi|300721434|ref|YP_003710705.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Xenorhabdus nematophila
ATCC 19061]
gi|297627922|emb|CBJ88468.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Xenorhabdus nematophila
ATCC 19061]
Length=376
Score = 277 bits (708), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 130/194 (68%), Positives = 157/194 (81%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN+P + G EL Y+ +A + G L GDG FT+R W+EQ+ GC K LLTPSCTA+LEM
Sbjct 2 IPFNKPPVVGTELEYMKQAMASGKLCGDGEFTKRCETWMEQRFGCPKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+LLDI+ GDE+I+PSYTFVST+NAFVLRG VFVDIRPDT+NIDETRI AIT +T+
Sbjct 62 AAILLDIQPGDEIIMPSYTFVSTSNAFVLRGATIVFVDIRPDTMNIDETRIEAAITEKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGVACEMD IM +A +NL VVEDAAQG M++Y+GRALG+IG +G SFHETK
Sbjct 122 AIVPVHYAGVACEMDTIMALAEKYNLYVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYSAGGEGGATLIN 195
>gi|237751030|ref|ZP_04581510.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Helicobacter bilis
ATCC 43879]
gi|229373475|gb|EEO23866.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Helicobacter bilis
ATCC 43879]
Length=343
Score = 276 bits (707), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/196 (68%), Positives = 156/196 (80%), Gaps = 0/196 (0%)
Query 4 HKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAAL 63
+ + FN+P+M EL YI +A G L GDG +T++ H LE + GC+K LLT SCTAAL
Sbjct 4 YMIAFNKPFMIENELKYIQDAIRRGALCGDGFYTKQCHKLLESKIGCKKVLLTHSCTAAL 63
Query 64 EMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPR 123
EM A+LLD++ GDEVI+PSYTFVSTANAFVLRG VPVFVDIR DTLNIDE I AIT +
Sbjct 64 EMAAILLDLQAGDEVIMPSYTFVSTANAFVLRGAVPVFVDIREDTLNIDENLIESAITQK 123
Query 124 TKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHE 183
TKAIV VHYAGVACEMD I++IA HNL VVEDAAQG + Y+GR LGSIGDLG SFHE
Sbjct 124 TKAIVCVHYAGVACEMDKILEIAKRHNLFVVEDAAQGVGSFYKGRPLGSIGDLGCFSFHE 183
Query 184 TKNVISGEGGALLVNS 199
TKN+ISGEGGAL++N+
Sbjct 184 TKNIISGEGGALVINN 199
>gi|237727912|ref|ZP_04558393.1| lipopolysaccharide biosynthesis protein RffA [Citrobacter sp.
30_2]
gi|226910361|gb|EEH96279.1| lipopolysaccharide biosynthesis protein RffA [Citrobacter sp.
30_2]
Length=376
Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/194 (70%), Positives = 153/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A + G L GDG FTRR WLEQ G K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQSAMNSGKLCGDGGFTRRCQQWLEQHFGSEKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALLLDI+ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET I AIT +T+
Sbjct 62 AALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGVACEMD IM +AT HNL VVEDAAQG M++Y+GRALG+IG +G SFHETK
Sbjct 122 AIVPVHYAGVACEMDTIMALATKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYTAGGEGGATLIN 195
>gi|53729207|ref|ZP_00348343.1| COG0399: Predicted pyridoxal phosphate-dependent enzyme apparently
involved in regulation of cell wall biogenesis [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209013|ref|YP_001054238.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165976980|ref|YP_001652573.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
14 more sequence titles
Length=381
Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/195 (68%), Positives = 157/195 (81%), Gaps = 1/195 (0%)
Query 5 KVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALE 64
++PFN+P + G EL Y+ +A + G L+GDG ++RR WLE Q G KALLTPSCTAALE
Sbjct 2 QIPFNKPPIVGTELGYMQQAMASGKLSGDGFYSRRCERWLENQFGTAKALLTPSCTAALE 61
Query 65 MMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRT 124
M A+L+DI+ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET+I AITP+T
Sbjct 62 MAAILIDIQAGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITPKT 121
Query 125 KAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHET 184
KAIVPVHYAG+ACEMD IM IA + L V+EDAAQ M+SY+G+ALG+IG G SFHET
Sbjct 122 KAIVPVHYAGIACEMDTIMAIAEKYRLYVIEDAAQAVMSSYKGKALGTIGHFGCYSFHET 181
Query 185 KNVIS-GEGGALLVN 198
KN + GEGGALL+N
Sbjct 182 KNYSAGGEGGALLIN 196
>gi|238759804|ref|ZP_04620961.1| Lipopolysaccharide biosynthesis protein rffA [Yersinia aldovae
ATCC 35236]
gi|238701947|gb|EEP94507.1| Lipopolysaccharide biosynthesis protein rffA [Yersinia aldovae
ATCC 35236]
Length=376
Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/194 (69%), Positives = 154/194 (80%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A + G L GDG FTRR W+EQ+ C KALLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELGYMQAAMTSGKLCGDGGFTRRCQQWMEQRFNCPKALLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALLLDI+ GDEVI+PS+TFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT +TK
Sbjct 62 AALLLDIKPGDEVIMPSFTFVSTANAFVLRGAKMVFVDIRPDTMNIDETKIEAAITDKTK 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
IVPVHYAGVACEMD IM +A HNL VVEDAAQG M++Y+G+ALG+IG +G SFHETK
Sbjct 122 VIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGKALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYTAGGEGGATLIN 195
>gi|329297887|ref|ZP_08255223.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Plautia stali symbiont]
Length=376
Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 130/194 (68%), Positives = 153/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G E+ Y+ A + G L GDG FTRR W+EQ G +K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTEVDYMQSAMASGKLCGDGGFTRRCQQWMEQHFGSKKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALL+DI+ GDEVI+PSYTFVSTANAFVLRG VFVD+RPDTLNIDET+I AITP+T+
Sbjct 62 AALLIDIQPGDEVIMPSYTFVSTANAFVLRGATIVFVDVRPDTLNIDETQIEAAITPKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGVACEMD IM +A H L V+EDAAQG M+ Y+GRALG+IG +G SFHETK
Sbjct 122 AIVPVHYAGVACEMDTIMALAAKHQLYVIEDAAQGVMSQYKGRALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYTAGGEGGATLIN 195
>gi|197287136|ref|YP_002153008.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Proteus mirabilis HI4320]
gi|227357172|ref|ZP_03841541.1| lipopolysaccharide biosynthesis aminotransferase [Proteus mirabilis
ATCC 29906]
gi|194684623|emb|CAR46519.1| lipopolysaccharide biosynthesis aminotransferase [Proteus mirabilis
HI4320]
gi|227162704|gb|EEI47671.1| lipopolysaccharide biosynthesis aminotransferase [Proteus mirabilis
ATCC 29906]
Length=376
Score = 274 bits (700), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 129/194 (67%), Positives = 155/194 (80%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN+P + G EL Y+ +A G L GDG FT++ WLE+Q C K LLTPSCTA+LEM
Sbjct 2 IPFNKPPVVGTELEYMKQAMESGKLCGDGNFTKKCEKWLEEQFHCHKTLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+LLDI+ GDEVI+PS+TFVST+NAFVLRG VFVDIRPDT+N+DET+I AIT +T+
Sbjct 62 AAILLDIKPGDEVIMPSFTFVSTSNAFVLRGATIVFVDIRPDTMNLDETKIEAAITEKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGVACEMD IM IA HNL VVEDAAQG M++Y+G+ALG+IG +G SFHETK
Sbjct 122 AIVPVHYAGVACEMDTIMAIAKKHNLFVVEDAAQGVMSTYKGKALGTIGHIGCYSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N S GEGGA L+N
Sbjct 182 NYSSGGEGGATLIN 195
>gi|253690365|ref|YP_003019555.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251756943|gb|ACT15019.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length=376
Score = 274 bits (700), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/194 (69%), Positives = 153/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A S G L GDG FTRR WLE +G +K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQAAMSSGKLCGDGGFTRRCQQWLEHYSGSKKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+LLD++ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT +T+
Sbjct 62 AAILLDVKPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITEKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
IVPVHYAGVACEMDAIM +A +NL VVEDAAQG M+SY+GR LGSIG +G SFHETK
Sbjct 122 IIVPVHYAGVACEMDAIMALAKKYNLYVVEDAAQGVMSSYKGRVLGSIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N S GEGGA L+N
Sbjct 182 NYTSGGEGGATLIN 195
>gi|152993136|ref|YP_001358857.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Sulfurovum sp. NBC37-1]
gi|151424997|dbj|BAF72500.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length=567
Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/194 (66%), Positives = 153/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN+P TG E Y+ E+ ++GDG FT+R W E++ C+KALLT SCT ALEM
Sbjct 190 IPFNKPPFTGNEEKYVLESMRSSKISGDGAFTKRCTQWFEEKLACKKALLTTSCTHALEM 249
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+LLDI+EGDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDE +I AIT +TK
Sbjct 250 AAMLLDIQEGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDEMKIEQAITEKTK 309
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGV CEMDAIM +A ++L VVEDAAQG M+SY+G+ALG+IG LG SFHETK
Sbjct 310 AIVPVHYAGVGCEMDAIMVLADKYDLFVVEDAAQGMMSSYKGKALGTIGHLGTFSFHETK 369
Query 186 NVIS-GEGGALLVN 198
N S GEGG L++N
Sbjct 370 NYTSAGEGGLLIIN 383
>gi|162421595|ref|YP_001605116.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Yersinia pestis Angola]
gi|167402049|ref|ZP_02307528.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167421086|ref|ZP_02312839.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Yersinia pestis biovar
Orientalis str. MG05-1020]
6 more sequence titles
Length=388
Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/197 (67%), Positives = 154/197 (79%), Gaps = 1/197 (0%)
Query 3 DHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAA 62
D +PFN P + G EL Y+ A S G L GDG FTRR W+E++ C K LLTPSCTA+
Sbjct 11 DEMIPFNTPPIVGTELGYMQAAMSSGKLCGDGGFTRRCQQWMEKRFNCPKVLLTPSCTAS 70
Query 63 LEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITP 122
LEM ALLLDI+ GDEVI+PS+TFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT
Sbjct 71 LEMAALLLDIKPGDEVIMPSFTFVSTANAFVLRGAKMVFVDIRPDTMNIDETKIEAAITD 130
Query 123 RTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFH 182
+T+ IVPVHYAGVACEMD IM +A HNL VVEDAAQG M++Y+G+ALG+IG +G SFH
Sbjct 131 KTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGKALGTIGHIGCFSFH 190
Query 183 ETKNVIS-GEGGALLVN 198
ETKN + GEGGA L+N
Sbjct 191 ETKNYTAGGEGGATLIN 207
>gi|336122975|ref|YP_004565023.1| dTDP-4-dehydro-6-deoxy-D-glucose 4-aminotransferase [Vibrio anguillarum
775]
gi|335340698|gb|AEH31981.1| dTDP-4-dehydro-6-deoxy-D-glucose 4-aminotransferase [Vibrio anguillarum
775]
Length=381
Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 129/194 (67%), Positives = 157/194 (81%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN+P +TG EL YIA+A S L+GDGPF ++ WLE+ T +KALLTPSCT ALE+
Sbjct 4 IPFNKPPVTGNELTYIAQAISSPKLSGDGPFAKQCEQWLEEHTHSKKALLTPSCTHALEL 63
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALL+DI+ GDEVI+PS+TFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT TK
Sbjct 64 AALLIDIQPGDEVIMPSFTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITTNTK 123
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGV+CEMD IM +A + L V+EDAAQG M++Y+G++LG+IG + LSFHETK
Sbjct 124 AIVPVHYAGVSCEMDTIMAVANKYKLFVIEDAAQGMMSTYKGQSLGAIGHMATLSFHETK 183
Query 186 NVIS-GEGGALLVN 198
N S GEGGALL+N
Sbjct 184 NYTSGGEGGALLIN 197
>gi|21957054|gb|AAM83958.1|AE013637_8 putative regulator [Yersinia pestis KIM 10]
gi|45437805|gb|AAS63354.1| putative lipopolysaccharide biosynthesis protein [Yersinia pestis
biovar Microtus str. 91001]
Length=401
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/197 (67%), Positives = 154/197 (79%), Gaps = 1/197 (0%)
Query 3 DHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAA 62
D +PFN P + G EL Y+ A S G L GDG FTRR W+E++ C K LLTPSCTA+
Sbjct 24 DEMIPFNTPPIVGTELGYMQAAMSSGKLCGDGGFTRRCQQWMEKRFNCPKVLLTPSCTAS 83
Query 63 LEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITP 122
LEM ALLLDI+ GDEVI+PS+TFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT
Sbjct 84 LEMAALLLDIKPGDEVIMPSFTFVSTANAFVLRGAKMVFVDIRPDTMNIDETKIEAAITD 143
Query 123 RTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFH 182
+T+ IVPVHYAGVACEMD IM +A HNL VVEDAAQG M++Y+G+ALG+IG +G SFH
Sbjct 144 KTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGKALGTIGHIGCFSFH 203
Query 183 ETKNVIS-GEGGALLVN 198
ETKN + GEGGA L+N
Sbjct 204 ETKNYTAGGEGGATLIN 220
>gi|190150880|ref|YP_001969405.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307264233|ref|ZP_07545823.1| Lipopolysaccharide biosynthesis protein rffA [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189916011|gb|ACE62263.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306870404|gb|EFN02158.1| Lipopolysaccharide biosynthesis protein rffA [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length=381
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/195 (67%), Positives = 156/195 (80%), Gaps = 1/195 (0%)
Query 5 KVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALE 64
++PFN+P + G EL Y+ +A + G L+GDG ++RR WLE Q G KALLTPSCTAALE
Sbjct 2 QIPFNKPPIVGTELGYMQQAMASGKLSGDGFYSRRCERWLENQFGTAKALLTPSCTAALE 61
Query 65 MMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRT 124
M A+L+DI+ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET+I AITP+T
Sbjct 62 MAAILIDIQAGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITPKT 121
Query 125 KAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHET 184
KAIVPVHYAG+ACEMD IM IA + L V+EDAAQ M+ Y+G+ALG+IG G SFHET
Sbjct 122 KAIVPVHYAGIACEMDTIMAIAEKYRLYVIEDAAQAVMSFYKGKALGTIGHFGCYSFHET 181
Query 185 KNVIS-GEGGALLVN 198
KN + GEGGALL+N
Sbjct 182 KNYSAGGEGGALLIN 196
>gi|37197229|dbj|BAC93069.1| lipopolysaccharide biosynthesis protein [Vibrio vulnificus YJ016]
Length=383
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/198 (67%), Positives = 157/198 (80%), Gaps = 1/198 (0%)
Query 2 SDHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTA 61
+++ +PFN+P +TG EL +I EA SCG L+GDG F+R+ W TG KALLTPSCT
Sbjct 4 TNYMIPFNKPPVTGEELQFIQEAISCGKLSGDGEFSRKCENWFVSHTGTTKALLTPSCTH 63
Query 62 ALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAIT 121
ALEM A+L+DI+ GDEVI+PSYTFVSTANAFVLRG VFVDIR DT+NIDE++I AIT
Sbjct 64 ALEMAAMLIDIQPGDEVIMPSYTFVSTANAFVLRGAKVVFVDIRADTMNIDESKIEVAIT 123
Query 122 PRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSF 181
RTKAIVPVHYAGVAC+MD IM ++ + L V+EDAAQG M++Y+GRALGSIG +G SF
Sbjct 124 ERTKAIVPVHYAGVACDMDTIMGLSDKYGLYVIEDAAQGMMSTYKGRALGSIGHIGTYSF 183
Query 182 HETKNVIS-GEGGALLVN 198
HETKN S GEGG LLVN
Sbjct 184 HETKNYTSGGEGGLLLVN 201
>gi|50123124|ref|YP_052291.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Pectobacterium atrosepticum
SCRI1043]
gi|49613650|emb|CAG77101.1| lipopolysaccharide biosynthesis protein [Pectobacterium atrosepticum
SCRI1043]
Length=376
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/194 (69%), Positives = 153/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A S G L GDG FTRR WLE +G +K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQAAMSSGKLCGDGGFTRRCQQWLEHYSGSKKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+LLDI+ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT +T+
Sbjct 62 AAILLDIKPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITEKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
IVPVHYAGVACEMDAIM +A ++L VVEDAAQG M+SY+GR LGSIG +G SFHETK
Sbjct 122 IIVPVHYAGVACEMDAIMALAKKYDLYVVEDAAQGVMSSYKGRVLGSIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N S GEGGA L+N
Sbjct 182 NYTSGGEGGATLIN 195
>gi|307246470|ref|ZP_07528542.1| Lipopolysaccharide biosynthesis protein rffA [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255453|ref|ZP_07537259.1| Lipopolysaccharide biosynthesis protein rffA [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259905|ref|ZP_07541618.1| Lipopolysaccharide biosynthesis protein rffA [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852533|gb|EFM84766.1| Lipopolysaccharide biosynthesis protein rffA [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306861495|gb|EFM93483.1| Lipopolysaccharide biosynthesis protein rffA [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865933|gb|EFM97808.1| Lipopolysaccharide biosynthesis protein rffA [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length=381
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/195 (67%), Positives = 156/195 (80%), Gaps = 1/195 (0%)
Query 5 KVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALE 64
++PFN+P + G EL Y+ +A + G L+GDG ++RR WLE Q G KALLTPSCTAALE
Sbjct 2 QIPFNKPPIVGTELGYMQQAMASGKLSGDGFYSRRCERWLENQFGTAKALLTPSCTAALE 61
Query 65 MMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRT 124
M A+L+DI+ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET+I AITP+T
Sbjct 62 MAAILIDIQAGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITPKT 121
Query 125 KAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHET 184
KAIVPVHYAG+ACEMD IM IA + L V+EDAAQ M+ Y+G+ALG+IG G SFHET
Sbjct 122 KAIVPVHYAGIACEMDTIMAIAEKYRLYVIEDAAQAVMSFYKGKALGTIGHFGCYSFHET 181
Query 185 KNVIS-GEGGALLVN 198
KN + GEGGALL+N
Sbjct 182 KNYSAGGEGGALLIN 196
>gi|227114344|ref|ZP_03828000.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length=376
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/194 (69%), Positives = 153/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A S G L GDG FTRR WLE +G +K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQAAMSSGKLCGDGGFTRRCQQWLEHYSGSKKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+LLD++ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT +T+
Sbjct 62 AAILLDVKPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITEKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
IVPVHYAGVACEMDAIM +A ++L VVEDAAQG M+SY+GR LGSIG +G SFHETK
Sbjct 122 IIVPVHYAGVACEMDAIMALAKKYDLYVVEDAAQGVMSSYKGRVLGSIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N S GEGGA L+N
Sbjct 182 NYTSGGEGGATLIN 195
>gi|114776260|ref|ZP_01451305.1| DegT/DnrJ/EryC1/StrS family protein [Mariprofundus ferrooxydans
PV-1]
gi|114553090|gb|EAU55488.1| DegT/DnrJ/EryC1/StrS family protein [Mariprofundus ferrooxydans
PV-1]
Length=367
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/186 (73%), Positives = 151/186 (82%), Gaps = 0/186 (0%)
Query 13 MTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEMMALLLDI 72
MTG E +I EAH+ G LAG+GPFTR WL +TGC+KALLT SCT+ALEM ALL+DI
Sbjct 1 MTGEETVHILEAHANGQLAGNGPFTRACQQWLVDKTGCKKALLTHSCTSALEMAALLIDI 60
Query 73 EEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTKAIVPVHY 132
+ GDEVI+PSYTFVSTANAFVLRG VPVFVDIR DTLNIDE+ I AIT +T+AI VHY
Sbjct 61 KPGDEVIMPSYTFVSTANAFVLRGAVPVFVDIRADTLNIDESLIEAAITAKTRAICVVHY 120
Query 133 AGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETKNVISGEG 192
AGV CEMD+IM IA H L V+EDAAQG M+ Y GRALGSIG L A SFHETKNVISGEG
Sbjct 121 AGVGCEMDSIMAIAERHGLYVIEDAAQGIMSDYHGRALGSIGHLAAFSFHETKNVISGEG 180
Query 193 GALLVN 198
GALL+N
Sbjct 181 GALLIN 186
>gi|238798903|ref|ZP_04642369.1| Lipopolysaccharide biosynthesis protein rffA [Yersinia mollaretii
ATCC 43969]
gi|238717257|gb|EEQ09107.1| Lipopolysaccharide biosynthesis protein rffA [Yersinia mollaretii
ATCC 43969]
Length=376
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/194 (68%), Positives = 153/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A + G L GDG FTRR W+EQ GC K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELGYMQAAMASGKLCGDGGFTRRCQQWMEQHFGCPKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALLLDI+ GDE+I+PS+TFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT +T+
Sbjct 62 AALLLDIKPGDEIIMPSFTFVSTANAFVLRGAKMVFVDIRPDTMNIDETKIEAAITDKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
IVPVHYAGVACEMD IM +A HNL VVEDAAQG M++Y+G+ALG+IG +G SFHETK
Sbjct 122 VIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGKALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYTAGGEGGATLIN 195
>gi|283834559|ref|ZP_06354300.1| lipopolysaccharide biosynthesis protein RffA [Citrobacter youngae
ATCC 29220]
gi|291069689|gb|EFE07798.1| lipopolysaccharide biosynthesis protein RffA [Citrobacter youngae
ATCC 29220]
Length=376
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/194 (69%), Positives = 152/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A + G L GDG +TRR WLEQ G K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQSAMNSGKLCGDGGYTRRCQQWLEQHFGSEKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALLLDI+ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET I AIT +T+
Sbjct 62 AALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGVACEMD IM +A HNL VVEDAAQG M++Y+GRALG+IG +G SFHETK
Sbjct 122 AIVPVHYAGVACEMDTIMALAAKHNLYVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYTAGGEGGATLIN 195
>gi|320088340|emb|CBY98100.1| UDP-4-amino-4-deoxy-L-arabinose-oxoglutarateaminotransferase
UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase;
UDP-Ara4O aminotransferase [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length=444
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/197 (69%), Positives = 154/197 (79%), Gaps = 1/197 (0%)
Query 3 DHKVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAA 62
D+ +PFN P + G EL Y+ A S G L GDG FTRR WLEQ G K LLTPSCTA+
Sbjct 67 DNMIPFNAPPVVGTELEYMQSAMSSGKLCGDGGFTRRCQQWLEQHFGSAKVLLTPSCTAS 126
Query 63 LEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITP 122
LEM ALLLDI+ GDEVI+PS+TFVSTANAFVLRG VFVDIRPDT+NIDET I AIT
Sbjct 127 LEMAALLLDIQPGDEVIMPSFTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITD 186
Query 123 RTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFH 182
+T+AIVPVHYAGVACEMD IM +A +NL VVEDAAQG M++Y+GRALG+IG +G SFH
Sbjct 187 KTRAIVPVHYAGVACEMDVIMALADKYNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFH 246
Query 183 ETKNVIS-GEGGALLVN 198
ETKN + GEGGA L+N
Sbjct 247 ETKNYTAGGEGGATLIN 263
>gi|227325826|ref|ZP_03829850.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length=376
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/194 (69%), Positives = 153/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A S G L GDG FTRR WLE +G +K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQAAMSSGKLCGDGGFTRRCQQWLEHYSGSKKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+LLD++ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT +T+
Sbjct 62 AAILLDVKPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITEKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
IVPVHYAGVACEMDAIM +A ++L VVEDAAQG M+SY+GR LGSIG +G SFHETK
Sbjct 122 IIVPVHYAGVACEMDAIMALAKKYDLYVVEDAAQGVMSSYKGRVLGSIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N S GEGGA L+N
Sbjct 182 NYTSGGEGGATLIN 195
>gi|56459654|ref|YP_154935.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Idiomarina loihiensis
L2TR]
gi|56178664|gb|AAV81386.1| Predicted pyridoxal phosphate-dependent enzyme [Idiomarina loihiensis
L2TR]
Length=380
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/194 (66%), Positives = 155/194 (80%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN+P +TG E+ YI EA ++GDGPF +R W E+ +KALLTPSCTAALE+
Sbjct 2 IPFNKPPLTGNEVQYITEALKGNKISGDGPFGKRCQQWFEENLPTQKALLTPSCTAALEL 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+L+D++ GDE+I+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT RTK
Sbjct 62 AAILIDVQSGDEIIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITDRTK 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGV+CEMDAIM IA ++L V+EDAAQG M+SY+ R LG+IG LGA SFHETK
Sbjct 122 AIVPVHYAGVSCEMDAIMDIAGRYSLYVIEDAAQGVMSSYKERPLGTIGHLGAFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N S GEGG L++N
Sbjct 182 NYTSGGEGGLLIIN 195
>gi|261823421|ref|YP_003261527.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Pectobacterium wasabiae
WPP163]
gi|261607434|gb|ACX89920.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Pectobacterium wasabiae
WPP163]
Length=376
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/194 (69%), Positives = 153/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A S G L GDG FTRR WLE +G +K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQAAMSSGKLCGDGGFTRRCQQWLEHYSGSKKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
A+LLD++ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET+I AIT +T+
Sbjct 62 AAILLDVKPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITEKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
IVPVHYAGVACEMDAIM +A ++L VVEDAAQG M+SY+GR LGSIG +G SFHETK
Sbjct 122 IIVPVHYAGVACEMDAIMALAKKYDLYVVEDAAQGVMSSYKGRVLGSIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N S GEGGA L+N
Sbjct 182 NYTSGGEGGATLIN 195
>gi|296132030|ref|YP_003639277.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Thermincola sp. JR]
gi|296030608|gb|ADG81376.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Thermincola potens
JR]
Length=377
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/194 (68%), Positives = 153/194 (79%), Gaps = 0/194 (0%)
Query 5 KVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALE 64
KVPFN P +TG+E YIAEA + L+GDG F+R+ HAWL + GC KALLT SCT ALE
Sbjct 2 KVPFNIPAVTGKETYYIAEAIANNKLSGDGEFSRKCHAWLTENCGCLKALLTTSCTHALE 61
Query 65 MMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRT 124
M A+L I+ GDEVI+PSYTFVSTANAFVLRG VF DIRPDT+N+DE I A+T RT
Sbjct 62 MSAILAGIQPGDEVIMPSYTFVSTANAFVLRGAKIVFTDIRPDTMNMDEKLIERAVTERT 121
Query 125 KAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHET 184
KAIVPVHYAGVAC+MD IMKIA HNL V+EDAAQ M++Y+G+ALG+IG LG SFH+T
Sbjct 122 KAIVPVHYAGVACDMDTIMKIAGKHNLLVIEDAAQAVMSTYKGKALGTIGHLGCYSFHDT 181
Query 185 KNVISGEGGALLVN 198
KN GEGGALL+N
Sbjct 182 KNYTCGEGGALLIN 195
>gi|213615699|ref|ZP_03371525.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
Length=259
Score = 271 bits (694), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/194 (69%), Positives = 152/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A S G L GDG FTRR WLEQ G K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELEYMQSAMSSGKLCGDGGFTRRCQQWLEQHFGSAKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALLLDI+ GDEVI+PS+TFVSTANAFVLRG VFVDIRPDT+NIDET I AIT +T+
Sbjct 62 AALLLDIQPGDEVIMPSFTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGVACEMD IM +A +NL VVEDAAQG M++Y+GRALG+IG +G SFHETK
Sbjct 122 AIVPVHYAGVACEMDVIMALADKYNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYTAGGEGGATLIN 195
>gi|297518744|ref|ZP_06937130.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Escherichia coli OP50]
Length=317
Score = 271 bits (694), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/194 (69%), Positives = 151/194 (78%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A G L GDG FTRR WLEQ+ G K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALLLDI+ GDEVI+PSYTFVSTANAFVLRG VFVD+RPDT+NIDET I AIT +T+
Sbjct 62 AALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
IVPVHYAGVACEMD IM +A HNL VVEDAAQG M++Y+GRALG+IG +G SFHETK
Sbjct 122 VIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYTAGGEGGATLIN 195
>gi|283787527|ref|YP_003367392.1| dTDP-4-oxo-6-deoxy-D-glucose transaminase [Citrobacter rodentium
ICC168]
gi|282950981|emb|CBG90658.1| dTDP-4-oxo-6-deoxy-D-glucose transaminase [Citrobacter rodentium
ICC168]
Length=376
Score = 271 bits (693), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/194 (69%), Positives = 152/194 (79%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A G L GDG FTRR WLEQ+ G K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALLLDI+ GDEVI+PSYTFVSTANAFVLRG +FVDIRPDT+NIDETRI AIT +T+
Sbjct 62 AALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIIFVDIRPDTMNIDETRIEAAITDKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
IVPVHYAGVACEMD IM +A +NL VVEDAAQG M++Y+GRALG+IG +G SFHETK
Sbjct 122 VIVPVHYAGVACEMDTIMALAEKYNLYVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYTAGGEGGATLIN 195
>gi|334126161|ref|ZP_08500140.1| lipopolysaccharide biosynthesis protein RffA [Enterobacter hormaechei
ATCC 49162]
gi|333385821|gb|EGK57047.1| lipopolysaccharide biosynthesis protein RffA [Enterobacter hormaechei
ATCC 49162]
Length=376
Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/194 (69%), Positives = 151/194 (78%), Gaps = 1/194 (0%)
Query 6 VPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEM 65
+PFN P + G EL Y+ A G L GDG FTRR W+EQ+ K LLTPSCTA+LEM
Sbjct 2 IPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWMEQRFNSAKVLLTPSCTASLEM 61
Query 66 MALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTK 125
ALLLDI+ GDEVI+PSYTFVSTANAFVLRG VFVDIRPDT+NIDET I AIT +T+
Sbjct 62 AALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKTR 121
Query 126 AIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETK 185
AIVPVHYAGVACEMD IM IA HNL VVEDAAQG M++Y+GRALG+IG +G SFHETK
Sbjct 122 AIVPVHYAGVACEMDTIMAIANKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181
Query 186 NVIS-GEGGALLVN 198
N + GEGGA L+N
Sbjct 182 NYTAGGEGGATLIN 195
>gi|302671905|ref|YP_003831865.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Butyrivibrio proteoclasticus
B316]
gi|302396378|gb|ADL35283.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Butyrivibrio proteoclasticus
B316]
Length=378
Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/193 (68%), Positives = 150/193 (78%), Gaps = 0/193 (0%)
Query 5 KVPFNRPYMTGRELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALE 64
++ FN P TG+E YI E + GDGP+T +++ W+E++TG KALLT SCT A E
Sbjct 2 RINFNVPPFTGKEFEYIKECVENQKICGDGPYTAKANEWIEKKTGVTKALLTTSCTHATE 61
Query 65 MMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRT 124
M A+L I+EGDEVILPSYTFVSTANAFVLRG VFVDIRPDT+NIDE I AITP+T
Sbjct 62 MSAILAGIKEGDEVILPSYTFVSTANAFVLRGAKVVFVDIRPDTMNIDENLIEQAITPKT 121
Query 125 KAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHET 184
KAIVPVHYAGVACEMD IM IA HNL V+EDAAQG M++Y+GRALGSIGD G SFHET
Sbjct 122 KAIVPVHYAGVACEMDTIMDIAKRHNLIVIEDAAQGVMSTYKGRALGSIGDFGNFSFHET 181
Query 185 KNVISGEGGALLV 197
KN GEGGALL+
Sbjct 182 KNYSMGEGGALLL 194
Lambda K H
0.320 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 215040480604
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40