BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1509
Length=293
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608647|ref|NP_216025.1| hypothetical protein Rv1509 [Mycoba... 601 4e-170
gi|340626528|ref|YP_004744980.1| hypothetical protein MCAN_15301... 600 9e-170
gi|254364382|ref|ZP_04980428.1| hypothetical protein TBHG_01490 ... 573 1e-161
gi|167969320|ref|ZP_02551597.1| hypothetical protein MtubH3_1536... 535 2e-150
gi|289753595|ref|ZP_06512973.1| conserved hypothetical protein [... 470 1e-130
gi|289750073|ref|ZP_06509451.1| LOW QUALITY PROTEIN: hypothetica... 466 2e-129
gi|254461880|ref|ZP_05075296.1| Methyltransferase domain family ... 114 2e-23
gi|254515908|ref|ZP_05127968.1| Methyltransferase domain family ... 112 5e-23
gi|110677957|ref|YP_680964.1| hypothetical protein RD1_0573 [Ros... 112 8e-23
gi|338782296|gb|EGP46671.1| hypothetical protein AXXA_09523 [Ach... 99.8 5e-19
gi|114776265|ref|ZP_01451310.1| hypothetical protein SPV1_01057 ... 98.2 1e-18
gi|83645190|ref|YP_433625.1| SAM-dependent methyltransferase [Ha... 57.4 3e-06
gi|256831039|ref|YP_003159767.1| type 11 methyltransferase [Desu... 57.0 3e-06
gi|302864792|ref|YP_003833429.1| glycoside hydrolase family 10 p... 51.2 2e-04
gi|315501084|ref|YP_004079971.1| type 11 methyltransferase [Micr... 51.2 2e-04
gi|300780307|ref|ZP_07090163.1| SAM-dependent methyltransferase ... 51.2 2e-04
gi|297563763|ref|YP_003682737.1| type 11 methyltransferase [Noca... 50.8 2e-04
gi|254420039|ref|ZP_05033763.1| 3-demethylubiquinone-9 3-methylt... 50.8 3e-04
gi|186684927|ref|YP_001868123.1| methyltransferase type 11 [Nost... 50.4 4e-04
gi|317491476|ref|ZP_07949912.1| methyltransferase domain-contain... 49.7 6e-04
gi|284990875|ref|YP_003409429.1| ubiquinone biosynthesis O-methy... 49.3 8e-04
gi|284030657|ref|YP_003380588.1| type 11 methyltransferase [Krib... 48.9 8e-04
gi|320159457|ref|YP_004172681.1| hypothetical protein ANT_00470 ... 48.9 0.001
gi|82701414|ref|YP_410980.1| hypothetical protein Nmul_A0280 [Ni... 48.9 0.001
gi|325002666|ref|ZP_08123778.1| Methyltransferase type 11 [Pseud... 47.8 0.002
gi|261854864|ref|YP_003262147.1| type 11 methyltransferase [Halo... 47.8 0.002
gi|111022065|ref|YP_705037.1| 3-demethylubiquinone-9 3-O-methylt... 47.0 0.004
gi|329888696|ref|ZP_08267294.1| 3-demethylubiquinone-9 3-O-methy... 47.0 0.004
gi|295688324|ref|YP_003592017.1| ubiquinone biosynthesis O-methy... 46.6 0.004
gi|240169321|ref|ZP_04747980.1| hypothetical protein MkanA1_0840... 46.2 0.006
gi|222054067|ref|YP_002536429.1| ubiquinone biosynthesis O-methy... 46.2 0.006
gi|16125093|ref|NP_419657.1| 3-demethylubiquinone-9 3-methyltran... 46.2 0.007
gi|315500228|ref|YP_004089031.1| ubiquinone biosynthesis o-methy... 45.8 0.007
gi|189424586|ref|YP_001951763.1| hypothetical protein Glov_1527 ... 45.8 0.007
gi|345138805|dbj|BAK68414.1| putative methyltransferase [Sphingo... 45.8 0.009
gi|84496192|ref|ZP_00995046.1| putative methyltransferase [Janib... 45.8 0.009
gi|321453645|gb|EFX64861.1| hypothetical protein DAPPUDRAFT_3042... 45.1 0.012
gi|325282833|ref|YP_004255374.1| Methyltransferase type 11 [Dein... 45.1 0.014
gi|225022402|ref|ZP_03711594.1| hypothetical protein CORMATOL_02... 44.7 0.015
gi|321453646|gb|EFX64862.1| hypothetical protein DAPPUDRAFT_2045... 44.7 0.015
gi|300949434|ref|ZP_07163438.1| methyltransferase domain protein... 44.7 0.015
gi|335430142|ref|ZP_08557037.1| methyltransferase type 11 [Halop... 44.7 0.016
gi|158334407|ref|YP_001515579.1| hypothetical protein AM1_1228 [... 44.7 0.017
gi|300115071|ref|YP_003761646.1| methyltransferase type 11 [Nitr... 44.7 0.019
gi|15894015|ref|NP_347364.1| SAM-dependent methyltransferase [Cl... 44.7 0.020
gi|221634564|ref|YP_002523252.1| Methyltransferase type 11 [Rhod... 44.3 0.021
gi|218510200|ref|ZP_03508078.1| hypothetical protein RetlB5_2367... 44.3 0.021
gi|305680305|ref|ZP_07403113.1| methyltransferase domain protein... 44.3 0.021
gi|190891229|ref|YP_001977771.1| 3-demethylubiquinone-9 3-methyl... 44.3 0.023
gi|239908568|ref|YP_002955310.1| putative 3-demethylubiquinone-9... 44.3 0.024
>gi|15608647|ref|NP_216025.1| hypothetical protein Rv1509 [Mycobacterium tuberculosis H37Rv]
gi|15840973|ref|NP_336010.1| hypothetical protein MT1557 [Mycobacterium tuberculosis CDC1551]
gi|148661305|ref|YP_001282828.1| hypothetical protein MRA_1521 [Mycobacterium tuberculosis H37Ra]
47 more sequence titles
Length=293
Score = 601 bits (1550), Expect = 4e-170, Method: Compositional matrix adjust.
Identities = 292/293 (99%), Positives = 293/293 (100%), Gaps = 0/293 (0%)
Query 1 VFALSNNLNRVNACMDGFLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPV 60
+FALSNNLNRVNACMDGFLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPV
Sbjct 1 MFALSNNLNRVNACMDGFLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPV 60
Query 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA 120
GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA
Sbjct 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA 120
Query 121 EDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPT 180
EDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPT
Sbjct 121 EDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPT 180
Query 181 FFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVW 240
FFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVW
Sbjct 181 FFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVW 240
Query 241 MLERALTDKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR 293
MLERALTDKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR
Sbjct 241 MLERALTDKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR 293
>gi|340626528|ref|YP_004744980.1| hypothetical protein MCAN_15301 [Mycobacterium canettii CIPT
140010059]
gi|340004718|emb|CCC43862.1| hypothetical protein MCAN_15301 [Mycobacterium canettii CIPT
140010059]
Length=293
Score = 600 bits (1547), Expect = 9e-170, Method: Compositional matrix adjust.
Identities = 291/293 (99%), Positives = 293/293 (100%), Gaps = 0/293 (0%)
Query 1 VFALSNNLNRVNACMDGFLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPV 60
+FALSNNLNRVNACMDGFLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPV
Sbjct 1 MFALSNNLNRVNACMDGFLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPV 60
Query 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA 120
GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA
Sbjct 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA 120
Query 121 EDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPT 180
EDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPT
Sbjct 121 EDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPT 180
Query 181 FFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVW 240
FFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVW
Sbjct 181 FFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVW 240
Query 241 MLERALTDKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR 293
MLERALTDKEFAGRRAQWMVAAIR+AVKLRVHHLAGYVPATLQPIMDVRLTKR
Sbjct 241 MLERALTDKEFAGRRAQWMVAAIRAAVKLRVHHLAGYVPATLQPIMDVRLTKR 293
>gi|254364382|ref|ZP_04980428.1| hypothetical protein TBHG_01490 [Mycobacterium tuberculosis str.
Haarlem]
gi|254550529|ref|ZP_05140976.1| hypothetical protein Mtube_08722 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|308231859|ref|ZP_07414037.2| hypothetical protein TMAG_02839 [Mycobacterium tuberculosis SUMu001]
15 more sequence titles
Length=279
Score = 573 bits (1477), Expect = 1e-161, Method: Compositional matrix adjust.
Identities = 279/279 (100%), Positives = 279/279 (100%), Gaps = 0/279 (0%)
Query 15 MDGFLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLL 74
MDGFLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLL
Sbjct 1 MDGFLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLL 60
Query 75 SCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFS 134
SCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFS
Sbjct 61 SCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFS 120
Query 135 LNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHR 194
LNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHR
Sbjct 121 LNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHR 180
Query 195 IEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALTDKEFAGR 254
IEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALTDKEFAGR
Sbjct 181 IEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALTDKEFAGR 240
Query 255 RAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR 293
RAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR
Sbjct 241 RAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR 279
>gi|167969320|ref|ZP_02551597.1| hypothetical protein MtubH3_15360 [Mycobacterium tuberculosis
H37Ra]
Length=261
Score = 535 bits (1379), Expect = 2e-150, Method: Compositional matrix adjust.
Identities = 260/261 (99%), Positives = 261/261 (100%), Gaps = 0/261 (0%)
Query 33 LRSLFDTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTG 92
+RSLFDTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTG
Sbjct 1 MRSLFDTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTG 60
Query 93 EGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVS 152
EGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVS
Sbjct 61 EGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVS 120
Query 153 EVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHRIEGNTGMDDPKGVWRSLN 212
EVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHRIEGNTGMDDPKGVWRSLN
Sbjct 121 EVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHRIEGNTGMDDPKGVWRSLN 180
Query 213 WITVPKVKRFAAKDATLTLRFHRAMLVWMLERALTDKEFAGRRAQWMVAAIRSAVKLRVH 272
WITVPKVKRFAAKDATLTLRFHRAMLVWMLERALTDKEFAGRRAQWMVAAIRSAVKLRVH
Sbjct 181 WITVPKVKRFAAKDATLTLRFHRAMLVWMLERALTDKEFAGRRAQWMVAAIRSAVKLRVH 240
Query 273 HLAGYVPATLQPIMDVRLTKR 293
HLAGYVPATLQPIMDVRLTKR
Sbjct 241 HLAGYVPATLQPIMDVRLTKR 261
>gi|289753595|ref|ZP_06512973.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289694182|gb|EFD61611.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=248
Score = 470 bits (1210), Expect = 1e-130, Method: Compositional matrix adjust.
Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)
Query 68 GGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEK 127
GGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEK
Sbjct 23 GGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEK 82
Query 128 RFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELT 187
RFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELT
Sbjct 83 RFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELT 142
Query 188 CRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALT 247
CRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALT
Sbjct 143 CRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALT 202
Query 248 DKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR 293
DKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR
Sbjct 203 DKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR 248
>gi|289750073|ref|ZP_06509451.1| LOW QUALITY PROTEIN: hypothetical protein TBDG_02799 [Mycobacterium
tuberculosis T92]
gi|289690660|gb|EFD58089.1| LOW QUALITY PROTEIN: hypothetical protein TBDG_02799 [Mycobacterium
tuberculosis T92]
Length=282
Score = 466 bits (1199), Expect = 2e-129, Method: Compositional matrix adjust.
Identities = 225/226 (99%), Positives = 225/226 (99%), Gaps = 0/226 (0%)
Query 68 GGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEK 127
GGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEK
Sbjct 57 AGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEK 116
Query 128 RFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELT 187
RFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELT
Sbjct 117 RFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELT 176
Query 188 CRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALT 247
CRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALT
Sbjct 177 CRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALT 236
Query 248 DKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR 293
DKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR
Sbjct 237 DKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIMDVRLTKR 282
>gi|254461880|ref|ZP_05075296.1| Methyltransferase domain family [Rhodobacterales bacterium HTCC2083]
gi|206678469|gb|EDZ42956.1| Methyltransferase domain family [Rhodobacteraceae bacterium HTCC2083]
Length=294
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/252 (34%), Positives = 116/252 (47%), Gaps = 11/252 (4%)
Query 38 DTMAAEARFARDWLSEDLARLPVGAALLEVG--GGVLLLSCQLAAEGFDITAIEPTGEGF 95
D AEA+F ++ E L +LP LEVG G+L+ + +I IEP G GF
Sbjct 32 DISIAEAQFGFRYVEEHLGKLPANGRALEVGCGSGILMGLLKERYPQLEIQGIEPLGSGF 91
Query 96 GKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVL 155
LG I + I E F E FD +++NV EH++ +R V L
Sbjct 92 AA---LGSINQYIRDQGIQILDIGYEYFQPEHHFDVIYAINVFEHLEDWRHFLRFVEAHL 148
Query 156 KPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWIT 215
LCPNY FPYE HF IP K +T V R I + D G+W SLN++
Sbjct 149 ASDGVCVILCPNYGFPYESHFKIPVIINKSITASVFRKSITQHEERKDSHGLWHSLNFVK 208
Query 216 VPKVKRFAAKDATLTLRFHRAMLVWMLERALTDKEFAGRRAQWMVAAI-RSAVKLRVHHL 274
+ +V R A K L L ++ M+ R D EF R+ Q +V ++ R A KL + L
Sbjct 209 LQQV-RNALKACPLRLTVRHRIIEDMISRIGNDAEF--RKRQKVVGSLGRVAYKLGLTKL 265
Query 275 AGYVPATLQPIM 286
Y + Q +M
Sbjct 266 FRY--SIFQNVM 275
>gi|254515908|ref|ZP_05127968.1| Methyltransferase domain family protein [gamma proteobacterium
NOR5-3]
gi|219675630|gb|EED31996.1| Methyltransferase domain family protein [gamma proteobacterium
NOR5-3]
Length=300
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/273 (31%), Positives = 128/273 (47%), Gaps = 21/273 (7%)
Query 29 HAPELRSLFDTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAI 88
++ +L L ++EAR + L + +LEVG G+ LLS L ++ ++I A+
Sbjct 33 NSTDLLKLVKVYSSEARVTLPVIEPYLGK---NKRILEVGAGLCLLSLFLRSQDYNIIAL 89
Query 89 EPTGEGFGKFRQLGDIVLE------LAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHID 142
EP GF F L + +LE LA T + D FD FS NV+EHI
Sbjct 90 EPAQGGFDHFNDLKNSILESSQNMDLAVLDIT---AQELDPAENGHFDLIFSNNVLEHIP 146
Query 143 LPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTF-FTKELTCRVMRHRIEGNTGM 201
+EA ++ VL P CPNYV PYEPHF +P F +T V I G +
Sbjct 147 DINEAFLALANVLAPDGQMIHTCPNYVVPYEPHFGLPVVKFWPRITSLVWPEEINGQLDL 206
Query 202 DDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALTDKEFAGRRAQWMVA 261
W SLN+++ ++++ A + L +RF + ++ R D EFA R +
Sbjct 207 ------WESLNFLSYFQLRKIATR-YKLKIRFSKHVMYNAFLRIGHDSEFAKRHSSSTAG 259
Query 262 AI-RSAVKLRVHHLAGYVPATLQPIMDVRLTKR 293
I R+ VKLR+ +L +P L M ++ +
Sbjct 260 RIYRALVKLRLLNLIKVIPPALSTPMIFEISHK 292
>gi|110677957|ref|YP_680964.1| hypothetical protein RD1_0573 [Roseobacter denitrificans OCh
114]
gi|109454073|gb|ABG30278.1| conserved hypothetical protein [Roseobacter denitrificans OCh
114]
Length=291
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/258 (32%), Positives = 127/258 (50%), Gaps = 12/258 (4%)
Query 38 DTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAE--GFDITAIEPTGEGF 95
D AEA+F +++E L LP +LEVG G +L L + ++ +EP G+GF
Sbjct 29 DISIAEAQFGFRYVAEYLGELPENGKVLEVGCGSGILMGLLKEQYPTLNVEGVEPLGDGF 88
Query 96 GKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVL 155
LG I + I E ++ R+D + +NV EH++ + + V L
Sbjct 89 AV---LGSINRYIRNQGIEIQKIGYEQIETQNRYDVIYCINVFEHLNDWRDFLHFVENHL 145
Query 156 KPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWIT 215
P LCPNY FPYE HF IP K +T V R I+ + + G+WRSLN++
Sbjct 146 TPTGVCLILCPNYGFPYESHFKIPVIVNKPITASVFRKTIDRHEERKESHGLWRSLNFVK 205
Query 216 VPKVKRFAAKDAT-LTLRFHRAMLVWMLERALTDKEFAGRRAQWMVAAI-RSAVKLRVHH 273
+ +V++ A+ + LT+R HR ++ M+ R D EF R+ Q ++ + R A K +
Sbjct 206 LRQVRQALARTSLRLTVR-HR-IIEDMIARTGNDAEF--RKRQKVIGTLGRVAYKAGITK 261
Query 274 LAGY-VPATLQPIMDVRL 290
L Y + + P M + L
Sbjct 262 LFRYPLFQNVMPYMQLEL 279
>gi|338782296|gb|EGP46671.1| hypothetical protein AXXA_09523 [Achromobacter xylosoxidans AXX-A]
Length=292
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/235 (34%), Positives = 106/235 (46%), Gaps = 11/235 (4%)
Query 55 LARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLE-LAAARP 113
L +P GA +LEVG G LLS L + G DI IEP GFG G ++ E + AA
Sbjct 58 LREIPPGARVLEVGAGTGLLSLILRSAGVDIVPIEPGSGGFGFNATAGRLLRERVDAADL 117
Query 114 TIAPCKAEDF--ISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFP 171
+ +D +FD FS+NV+EHI A + VL G C NY+ P
Sbjct 118 KVLDIGVQDLDPAVHGKFDLIFSVNVLEHIPDLTSAFAGMRSVLASGGKMRHTCANYLLP 177
Query 172 YEPHFNIPTFFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTL 231
Y+PH+ I F L R + + + VW SLN++TV +VKR K LT
Sbjct 178 YDPHYGI--FLVPFLP----RATAWFKPSLRNDE-VWESLNFVTVGQVKRL-CKQHGLTC 229
Query 232 RFHRAMLVWMLERALTDKEFAGRRAQWMVAAIRSAVKLRVHHLAGYVPATLQPIM 286
F L +R TD F R+ W+ A R L ++PA++ M
Sbjct 230 SFESGALYEAFQRLGTDDAFRARQPGWLSAVKRVLEVTGGLKLIKHMPASISTPM 284
>gi|114776265|ref|ZP_01451310.1| hypothetical protein SPV1_01057 [Mariprofundus ferrooxydans PV-1]
gi|114553095|gb|EAU55493.1| hypothetical protein SPV1_01057 [Mariprofundus ferrooxydans PV-1]
Length=254
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/264 (30%), Positives = 118/264 (45%), Gaps = 19/264 (7%)
Query 36 LFDTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGF 95
+ +T A E+R + ++ L +LEVG G+ L S L +G+ ITA+EP GF
Sbjct 1 MLETYANESRVTIELIA---GHLQPDMRILEVGAGLCLTSLFLRQQGYHITALEPAIGGF 57
Query 96 GKFRQLGDIVLELAAARPTI------APCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVR 149
F ++ +LE P I P + + + FD FS NVMEHI A+
Sbjct 58 DLFARIKQAMLE---HYPGIDLQVMEKPSQQLNPTEDGCFDLIFSNNVMEHIPDWPAALD 114
Query 150 RVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHRIEGNTGMDDPKGVWR 209
++ VL CPNY PYEPH+ +P F R++ R + +G+W
Sbjct 115 AMATVLAEDGVMLHACPNYTVPYEPHYGVPVFRHFVTLSRLLFLRKTHD------QGIWN 168
Query 210 SLNWITVPKVKRFAAKDATLTLRFHRAMLVWMLERALTDKEFAGRRAQWMVAAIRSAVKL 269
SLN+IT + + L F +A+L L+R D F R + + R ++
Sbjct 169 SLNFITC-RALSAHCNNHDLNCHFEKALLYKALKRIDDDPLFEERHKGAVASIARLIMRS 227
Query 270 RVHHLAGYVPATLQPIMDVRLTKR 293
+ L ++P L M V + KR
Sbjct 228 GLGRLIRHIPPCLATPMVVEINKR 251
>gi|83645190|ref|YP_433625.1| SAM-dependent methyltransferase [Hahella chejuensis KCTC 2396]
gi|83633233|gb|ABC29200.1| SAM-dependent methyltransferase [Hahella chejuensis KCTC 2396]
Length=286
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (27%), Positives = 69/162 (43%), Gaps = 19/162 (11%)
Query 27 DAHAPELRSLFDTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFD-- 84
+ L+ ++ + +R W+S+ R V ++LEVG + + LA E +
Sbjct 28 NLQGENLQRHYEACSQSSRGVVRWVSQFADRNHV-KSILEVGSSIGMNCIALAEEYPEAR 86
Query 85 ITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCK-----AEDF-ISEKRFDFAFSLNVM 138
+T IEP GE V A +A C+ E+ + FD V+
Sbjct 87 VTGIEPEGEA----------VKVAEALSKDVASCRFIQGFGENMPFEDGEFDLILCSTVI 136
Query 139 EHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPT 180
EH+ D+ + +S VL + PNY++PYEPH I T
Sbjct 137 EHVKDVDKVISEMSRVLSKNGVIYIEAPNYIWPYEPHLQIWT 178
>gi|256831039|ref|YP_003159767.1| type 11 methyltransferase [Desulfomicrobium baculatum DSM 4028]
gi|256580215|gb|ACU91351.1| Methyltransferase type 11 [Desulfomicrobium baculatum DSM 4028]
Length=260
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/199 (28%), Positives = 83/199 (42%), Gaps = 11/199 (5%)
Query 51 LSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAA 110
LS ++P G +L VGGG + GF+ IEP E RQ V+ A
Sbjct 45 LSFICGQIPSGGKVLIVGGGTGAELVAFHSLGFEAWMIEPDKEAVKVARQKS--VVNNIA 102
Query 111 ARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVF 170
+ I FD +S V+EH+ D ++R + V++PGA P+Y
Sbjct 103 DKYVIDGVAELIPFKNSYFDLIWSFTVLEHVQDYDLSLREICRVMRPGAWGCLFFPDYRC 162
Query 171 PYEPHFN--IPTFFTKELTCRVMRHRIEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDAT 228
YE H+ +P F K + + R++G DPK ++ N I K R A
Sbjct 163 IYESHYKMYMPLFLPKWVAGLFL--RLKGR----DPKFFLKNTNKINHQKFIRTAMDLPI 216
Query 229 LTLRFHRAMLV-WMLERAL 246
T R ++ + + W R L
Sbjct 217 DTFRHYQPVGIEWKSGRTL 235
>gi|302864792|ref|YP_003833429.1| glycoside hydrolase family 10 protein [Micromonospora aurantiaca
ATCC 27029]
gi|302567651|gb|ADL43853.1| glycoside hydrolase family 10 [Micromonospora aurantiaca ATCC
27029]
Length=536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/118 (32%), Positives = 56/118 (48%), Gaps = 4/118 (3%)
Query 60 VGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQ-LGDIVLELAAARPTIAPC 118
G LLE+G G + +L I A++ + FR+ L D AA + +
Sbjct 35 TGRRLLEIGCGDGTYTMRLVGAFEQIEAVDIQQDRLALFRERLAD--YPAAAQKINVREL 92
Query 119 KAEDF-ISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPH 175
A + ++ FD ++ V+EHID D A+R+V VL PG + PN FP+E H
Sbjct 93 SATELDYPDESFDLVTAIEVVEHIDDLDAALRQVRRVLVPGGCFALTTPNRWFPFETH 150
>gi|315501084|ref|YP_004079971.1| type 11 methyltransferase [Micromonospora sp. L5]
gi|315407703|gb|ADU05820.1| Methyltransferase type 11 [Micromonospora sp. L5]
Length=245
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/119 (32%), Positives = 56/119 (48%), Gaps = 6/119 (5%)
Query 60 VGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQ--LGDIVLELAAARPTIAP 117
G LLE+G G + +L I A++ + FR+ GD AA + +
Sbjct 35 TGRRLLEIGCGDGTYTMRLVGAFEQIEAVDIQQDRLELFRERLAGDPA---AAQKINVRE 91
Query 118 CKAEDF-ISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPH 175
A + ++ FD ++ V+EHID D A+R+V VL PG + PN FP+E H
Sbjct 92 LSATELDYPDESFDLVTAIEVVEHIDDLDAALRQVRRVLVPGGCFALTTPNRWFPFETH 150
>gi|300780307|ref|ZP_07090163.1| SAM-dependent methyltransferase [Corynebacterium genitalium ATCC
33030]
gi|300534417|gb|EFK55476.1| SAM-dependent methyltransferase [Corynebacterium genitalium ATCC
33030]
Length=256
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/230 (26%), Positives = 87/230 (38%), Gaps = 29/230 (12%)
Query 36 LFDTMAAEARFARDWLSEDLARLPV-GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEG 94
+ +A + R D LS DL P+ G ++L+VGGG + + G +EP+
Sbjct 32 FYGGLARDTRLLIDALSHDLTNRPLHGQSVLDVGGGPGYFATEFEQAGAWYVGLEPS--- 88
Query 95 FGKFRQLGDIVLELAAARPTIAPCKAEDFIS----EKRFDFAFSLNVMEHIDLPDEAVRR 150
V E++AA T D + + FD +S NV+EHI PD
Sbjct 89 ----------VSEMSAAGLTGHGAVRGDGTALPFHDGSFDIVYSSNVVEHIPDPDAMCDE 138
Query 151 VSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELTCRVMRHRIEGNTGMDDPKGVWRS 210
+ V KPG ++ P+ H + + R R E G PK VW +
Sbjct 139 MLRVTKPGGLTIISYTVWLGPFGGHET--GLWQHYVGGEFARRRYEKKHG-HPPKNVWGT 195
Query 211 ------LNWITVPKVKRFAAKDATLTLRFHR--AMLVWMLERALTDKEFA 252
W ++ A A L L F R W + + +EFA
Sbjct 196 SLFDVPTTWGLTWSHQKTEAGVADLLLAFPRYHPSWAWWVTKVPGLREFA 245
>gi|297563763|ref|YP_003682737.1| type 11 methyltransferase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296848211|gb|ADH70231.1| Methyltransferase type 11 [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length=241
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/121 (34%), Positives = 55/121 (46%), Gaps = 4/121 (3%)
Query 57 RLPV-GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTI 115
+LPV G LL+VG G + +LA + AI+ E F G I R I
Sbjct 29 QLPVRGDRLLDVGCGDGTYTVELAGGYVRVDAIDLEPERLNAF--AGRIAGTGLEDRIGI 86
Query 116 APCKAEDF-ISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEP 174
A+ FD + V+EH+D + A+R V VLKPG ++ PN FP+E
Sbjct 87 HKMSADALAFDANTFDRVTAFEVVEHVDDLEGALREVRRVLKPGGAFSLTTPNRWFPFET 146
Query 175 H 175
H
Sbjct 147 H 147
>gi|254420039|ref|ZP_05033763.1| 3-demethylubiquinone-9 3-methyltransferase [Brevundimonas sp.
BAL3]
gi|196186216|gb|EDX81192.1| 3-demethylubiquinone-9 3-methyltransferase [Brevundimonas sp.
BAL3]
Length=272
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/149 (31%), Positives = 67/149 (45%), Gaps = 11/149 (7%)
Query 18 FLARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDLARLPV------GAALLEVGGGV 71
F A+ DAH P L A R+ L L R P G LL+VG G
Sbjct 40 FSAQAAEWWDAHGP-FAPLHRFNPARLALIREQLCARLGRDPKARRPFEGLTLLDVGCGG 98
Query 72 LLLSCQLAAEGFDITAIEPTGEGFGKFR-QLGDIVLELAAARPTIAPCKAEDFISEKRFD 130
L++ + GF +TAI+ + E G R G + L++A T+ +AE FD
Sbjct 99 GLIAEPMRRMGFSVTAIDASSENIGTARAHAGMVGLDIAYRAATVEQIEAE---GAGPFD 155
Query 131 FAFSLNVMEHIDLPDEAVRRVSEVLKPGA 159
++ V+EH+ P+ VR S +++PG
Sbjct 156 VVLTMEVIEHVADPEAFVRACSRLVRPGG 184
>gi|186684927|ref|YP_001868123.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
gi|186467379|gb|ACC83180.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
Length=227
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/63 (39%), Positives = 34/63 (54%), Gaps = 0/63 (0%)
Query 128 RFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTFFTKELT 187
FD FS +V+EH+ D+ + +EV++ G Y PN FP EPHF P F ++
Sbjct 102 EFDIVFSNSVIEHVGDYDQQYQMATEVMRVGKRYFVQTPNVFFPIEPHFVFPLFQFLPVS 161
Query 188 CRV 190
RV
Sbjct 162 SRV 164
>gi|317491476|ref|ZP_07949912.1| methyltransferase domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316921023|gb|EFV42346.1| methyltransferase domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length=265
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/138 (28%), Positives = 63/138 (46%), Gaps = 3/138 (2%)
Query 34 RSLFDTMAAEARFARDW--LSEDLARLPVGA-ALLEVGGGVLLLSCQLAAEGFDITAIEP 90
R+++ T + R A W L + L +LP +L+ GGG+ +SC+LAA G IT +
Sbjct 19 RNIYGTTKGKIRQAVLWQDLEQLLTQLPNRPLHILDAGGGLGQVSCELAARGHHITLCDI 78
Query 91 TGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRR 150
+GE + + D R +P + E+ D V+E + P EA+
Sbjct 79 SGEMLKRAQDYADEKGVSQHMRFVQSPAQEMHQYLEQPVDLILFHAVLEWVAEPQEALAS 138
Query 151 VSEVLKPGASYHFLCPNY 168
+ + L PG + + NY
Sbjct 139 LMKCLNPGGALSLMFYNY 156
>gi|284990875|ref|YP_003409429.1| ubiquinone biosynthesis O-methyltransferase [Geodermatophilus
obscurus DSM 43160]
gi|284064120|gb|ADB75058.1| ubiquinone biosynthesis O-methyltransferase [Geodermatophilus
obscurus DSM 43160]
Length=258
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/116 (29%), Positives = 52/116 (45%), Gaps = 5/116 (4%)
Query 53 EDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQ-LGDIVLELAAA 111
E L R P G L++G G L+ + A G + ++P+ R+ D LE+
Sbjct 42 ERLGRRPSGLRALDIGCGGGFLAEEFARLGCRVVGVDPSAPSIETARRHAADRGLEIDYR 101
Query 112 RPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPN 167
+ ED FD A+ +V+EH+D D+ + + LKPG +Y F N
Sbjct 102 VGSGEHLPVED----GEFDLAYCCDVLEHVDDLDQVIHETARALKPGGTYMFDTVN 153
>gi|284030657|ref|YP_003380588.1| type 11 methyltransferase [Kribbella flavida DSM 17836]
gi|283809950|gb|ADB31789.1| Methyltransferase type 11 [Kribbella flavida DSM 17836]
Length=241
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/117 (32%), Positives = 57/117 (49%), Gaps = 5/117 (4%)
Query 61 GAALLEVGGGVLLLSCQLAAEGFD-ITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCK 119
G LL+VG G + +LAA GFD +TA++ E FR ++ A + I
Sbjct 34 GGRLLDVGCGDGTYTRRLAA-GFDHVTAVDVEPERLAVFRS--EVAGTELAGKLVIRQMP 90
Query 120 AEDF-ISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPH 175
AE + + FD ++ V+EH+ D ++ + VL PG + PN FP+E H
Sbjct 91 AEQLDLPDASFDVVTTIEVLEHVRDLDASLAEIHRVLVPGGRFLITSPNRWFPFETH 147
>gi|320159457|ref|YP_004172681.1| hypothetical protein ANT_00470 [Anaerolinea thermophila UNI-1]
gi|319993310|dbj|BAJ62081.1| hypothetical protein ANT_00470 [Anaerolinea thermophila UNI-1]
Length=245
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 0/50 (0%)
Query 126 EKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPH 175
E FDF S V+EH+ A+R + VLKPG CPN +P+E H
Sbjct 95 ENHFDFLLSHEVLEHVQDDARAIREMVRVLKPGGRIALFCPNRGYPFETH 144
>gi|82701414|ref|YP_410980.1| hypothetical protein Nmul_A0280 [Nitrosospira multiformis ATCC
25196]
gi|82409479|gb|ABB73588.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length=238
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/130 (29%), Positives = 58/130 (45%), Gaps = 8/130 (6%)
Query 39 TMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFD-ITAIEPTGEGFGK 97
T + R W + + + ++LE+G G S + A+ F IE + E +
Sbjct 15 TYVLDNRLTLQWYPQRVVAMAQTGSMLELGLG-HGYSTEYFAKTFQRYQVIEGSQEMIDR 73
Query 98 FRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKP 157
FR+ A IA EDF +++RFD V+EH+D P +RR ++ L P
Sbjct 74 FRE------HFAIEGVDIAQGYFEDFETDERFDAIGMGFVLEHVDNPAAIIRRYAQFLSP 127
Query 158 GASYHFLCPN 167
G S + PN
Sbjct 128 GGSIYIAVPN 137
>gi|325002666|ref|ZP_08123778.1| Methyltransferase type 11 [Pseudonocardia sp. P1]
Length=259
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (40%), Positives = 32/51 (63%), Gaps = 0/51 (0%)
Query 129 FDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIP 179
FD A NV+EH+D +A+ R++ L+PG + L PN +P E H+++P
Sbjct 114 FDVAVLDNVLEHLDDQPDALERIASCLRPGGVAYILVPNRWWPIEAHYSLP 164
>gi|261854864|ref|YP_003262147.1| type 11 methyltransferase [Halothiobacillus neapolitanus c2]
gi|261835333|gb|ACX95100.1| Methyltransferase type 11 [Halothiobacillus neapolitanus c2]
Length=248
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/143 (25%), Positives = 67/143 (47%), Gaps = 9/143 (6%)
Query 53 EDLARLPVGAA-LLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAA 111
E+L R+ + + +L++G G ++ LA +T ++P E + ++ DI LE
Sbjct 30 ENLGRVKLEQSNVLDIGCGSGGIAAHLAPRVQSMTGMDP--EPWPRW----DIWLEAHPN 83
Query 112 RPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFP 171
+ + + FD V EH+ P ++ ++ ++KP +F PN +FP
Sbjct 84 LKFMQGSVESNSLEPHSFDVIICNQVYEHVPDPQALIQLIARLIKPEGIVYFAGPNLLFP 143
Query 172 YEPHFNIP--TFFTKELTCRVMR 192
EPH P + +EL ++M+
Sbjct 144 IEPHVFWPFVHWIPRELAIKIMK 166
>gi|111022065|ref|YP_705037.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodococcus jostii
RHA1]
gi|110821595|gb|ABG96879.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodococcus jostii
RHA1]
Length=279
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (30%), Positives = 55/134 (42%), Gaps = 15/134 (11%)
Query 44 ARFA--RDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQL 101
RFA R L E + R G L+VG G L+ + GF +T I+P+ R+
Sbjct 35 GRFAYFRKVLGETVGRDHRGLRALDVGSGGGFLAEEFTRIGFRVTGIDPSPVSVDTARRH 94
Query 102 G-----DIVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLK 156
DI + + P + FD A+ +V+EH+ D + S VLK
Sbjct 95 AAGSALDIEYRIGSGEHLPVP--------DATFDVAYCCDVLEHVSDLDGVIAETSRVLK 146
Query 157 PGASYHFLCPNYVF 170
PG Y F N F
Sbjct 147 PGGLYLFDTINRTF 160
>gi|329888696|ref|ZP_08267294.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brevundimonas diminuta
ATCC 11568]
gi|328847252|gb|EGF96814.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brevundimonas diminuta
ATCC 11568]
Length=272
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/108 (31%), Positives = 57/108 (53%), Gaps = 9/108 (8%)
Query 56 ARLPV-GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIV-LELAAARP 113
AR P G +L+++G G L++ + GF++TAI+ + E G R D V L++A
Sbjct 82 ARAPFSGLSLIDIGCGGGLIAEPMRRMGFEVTAIDASSENIGTARAHADQVGLDIAYRAA 141
Query 114 TIAPCKAEDFI--SEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGA 159
T+ E + FD ++ V+EH+ P+ +R S+++KPG
Sbjct 142 TV-----EQMVEAGAGPFDVVLTMEVIEHVADPESFIRACSKLIKPGG 184
>gi|295688324|ref|YP_003592017.1| ubiquinone biosynthesis O-methyltransferase [Caulobacter segnis
ATCC 21756]
gi|295430227|gb|ADG09399.1| ubiquinone biosynthesis O-methyltransferase [Caulobacter segnis
ATCC 21756]
Length=252
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/123 (34%), Positives = 61/123 (50%), Gaps = 15/123 (12%)
Query 42 AEARFARDWLSEDLARLPV-GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQ 100
A ARF RD DL R+P G +LL++G G LLS +A GF +TAI+ + +
Sbjct 53 ALARFGRD---GDL-RMPFEGLSLLDIGCGGGLLSEPMARLGFSVTAIDASE------KN 102
Query 101 LGDIVLELAAARPTIA--PCKAEDFISEKR--FDFAFSLNVMEHIDLPDEAVRRVSEVLK 156
+ A I P AE ++E FD ++ V+EH+ P +R +++LK
Sbjct 103 IKTAATHAAEQELKIGYRPATAEQLLAEGAGPFDVVLTMEVIEHVADPGAFLRTCAKLLK 162
Query 157 PGA 159
PG
Sbjct 163 PGG 165
>gi|240169321|ref|ZP_04747980.1| hypothetical protein MkanA1_08406 [Mycobacterium kansasii ATCC
12478]
Length=316
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/231 (27%), Positives = 90/231 (39%), Gaps = 40/231 (17%)
Query 38 DTMAAEARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGK 97
D + +F R WL E + P ++ E+G G L LAA G+D E T
Sbjct 77 DPQSPHQKFGR-WL-ELIGEPP--KSIYEIGSGQGGLISFLAARGYDCRGTEIT------ 126
Query 98 FRQLGDIVLELAAARPTIAPCKA---EDFISEKRFDFAFSLNVMEHI--DLPDEAVRRVS 152
R+ G ++ + A P+ A + F + +D S V+EHI D D +R V
Sbjct 127 -RERGQKLMPESRANPSWAISDGVHLDAFEPPETYDIVVSDQVIEHIHPDDLDSHLRSVR 185
Query 153 EVLKPGASYHFLCPN-YVFPYEPH-----FNIPTFFTKELTCRVMRHRIEGNTGMDDPKG 206
+LK G Y F P+ Y P++ KE TCR + + +
Sbjct 186 TILKGGGKYIFNTPHRYTGPHDVSRVFKCGEAAGMHLKEYTCRELVDAAQ--------RA 237
Query 207 VWRSLNWITVPK----------VKRFAAKDATLTLRFHRAMLVWMLERALT 247
+RS+ + VP+ V RFA DA L L R L+
Sbjct 238 GYRSIRYGFVPRRFRLMLTASGVNRFAGPDAAGILFLRAEFLAERFLRVLS 288
>gi|222054067|ref|YP_002536429.1| ubiquinone biosynthesis O-methyltransferase [Geobacter sp. FRC-32]
gi|221563356|gb|ACM19328.1| ubiquinone biosynthesis O-methyltransferase [Geobacter sp. FRC-32]
Length=258
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/106 (30%), Positives = 47/106 (45%), Gaps = 9/106 (8%)
Query 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGF---GKFRQLGDIVLELAAARPTIAP 117
G LEVG G +LS ++AA GF T I+P+ + G + + A P
Sbjct 40 GGTALEVGCGGGILSEEIAALGFTTTGIDPSAAALQVAADHAKAGGLSIGYLQAVGENLP 99
Query 118 CKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHF 163
+ FD AF +V+EH+ V ++ VLKPG + +
Sbjct 100 ------FPDNSFDVAFCCDVLEHVQDQTRTVAEIARVLKPGGIFCY 139
>gi|16125093|ref|NP_419657.1| 3-demethylubiquinone-9 3-methyltransferase [Caulobacter crescentus
CB15]
gi|221233820|ref|YP_002516256.1| 3-demethylubiquinone-9 3-methyltransferase [Caulobacter crescentus
NA1000]
gi|17368664|sp|Q9A9X1.1|UBIG_CAUCR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase;
Short=DHHB methyltransferase
gi|254789986|sp|B8H209.1|UBIG_CAUCN RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase;
Short=DHHB methyltransferase
gi|13422093|gb|AAK22825.1| 3-demethylubiquinone-9 3-methyltransferase [Caulobacter crescentus
CB15]
gi|220962992|gb|ACL94348.1| 3-demethylubiquinone 3-methyltransferase [Caulobacter crescentus
NA1000]
Length=252
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/123 (34%), Positives = 59/123 (48%), Gaps = 15/123 (12%)
Query 42 AEARFARDWLSEDLARLPV-GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQ 100
A ARF RD AR P G LL++G G LLS +A GF +TAI+ + +
Sbjct 53 ALARFDRD----GAARAPFEGLTLLDIGCGGGLLSEPMARLGFAVTAIDASE------KN 102
Query 101 LGDIVLELAAARPTIA--PCKAEDFISEKR--FDFAFSLNVMEHIDLPDEAVRRVSEVLK 156
+ A I P AE ++E FD ++ V+EH+ P E +R +++LK
Sbjct 103 IKTAATHAAEQGLDIGYRPATAEQLLAEGAGPFDVVLTMEVIEHVADPGEFLRTCAKLLK 162
Query 157 PGA 159
PG
Sbjct 163 PGG 165
>gi|315500228|ref|YP_004089031.1| ubiquinone biosynthesis o-methyltransferase [Asticcacaulis excentricus
CB 48]
gi|315418240|gb|ADU14880.1| ubiquinone biosynthesis O-methyltransferase [Asticcacaulis excentricus
CB 48]
Length=269
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/122 (27%), Positives = 58/122 (48%), Gaps = 10/122 (8%)
Query 45 RFARDWLSEDLARLPVGAA------LLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKF 98
RF RD + R P A L+++G G LLS + GFD+T I+ + + G
Sbjct 62 RFIRDTCVDHFLRDPRAVAPFGDLRLIDIGCGGGLLSEPMKRMGFDVTGIDASEKNIGTA 121
Query 99 R-QLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKP 157
+ ++ L++ T+ A E FD ++ V+EH++ P+ ++ + ++KP
Sbjct 122 KAHAAEVGLDIRYLAQTVEQVVAS---KEPGFDVVLTMEVIEHVNDPESFLKTCASLVKP 178
Query 158 GA 159
G
Sbjct 179 GG 180
>gi|189424586|ref|YP_001951763.1| hypothetical protein Glov_1527 [Geobacter lovleyi SZ]
gi|189420845|gb|ACD95243.1| hypothetical protein Glov_1527 [Geobacter lovleyi SZ]
Length=244
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/159 (25%), Positives = 72/159 (46%), Gaps = 13/159 (8%)
Query 20 ARIRSHVDAHAPELRSLFDTMAAEARFARDWLSEDL-ARLPVGAALLEVGGGVLLLSCQL 78
A +R + D+ L L T R W+ + + +++P G+ LLEVG G L++ L
Sbjct 18 ATVRDYCDSFD-NLNYLATTNCDLKDVQRPWVVKSIISKMPPGSRLLEVGAGQPLVADVL 76
Query 79 AAEGFDITAIEP---TGEGFGKFRQLGDIVLELAAARPTIAPCKAEDFISEKRFDFAFSL 135
G+ +T ++P +G G ++ ++ R + E + + FD +S+
Sbjct 77 VKLGYQVTVVDPYDGSGNGPSEYEDFKSRYPDITIIRKRFSDDLQE--LETESFDCIYSI 134
Query 136 NVMEHIDLPDEAVRRVS----EVLKPGASYHFLCPNYVF 170
+V+EH+ P A+ + + LK G H +YV
Sbjct 135 SVIEHV--PISAIPNICNGIRKFLKRGTGRHIHAIDYVL 171
>gi|345138805|dbj|BAK68414.1| putative methyltransferase [Sphingobium sp. SYK-6]
Length=260
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/109 (36%), Positives = 54/109 (50%), Gaps = 9/109 (8%)
Query 51 LSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAA 110
+ E + LP G ++EVG G L + AA GFD+T +E + EG R L D+
Sbjct 26 IMEAMRDLPPGN-IIEVGCGAGALLSEFAALGFDVTGLEMSVEG----RALSDVFAN-GQ 79
Query 111 ARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGA 159
AR T+ ED+ F + FS V+EHI+ A+R LKPG
Sbjct 80 ARMTVRETP-EDW--HAHFSYLFSFEVLEHIEDDLAALREWVGWLKPGG 125
>gi|84496192|ref|ZP_00995046.1| putative methyltransferase [Janibacter sp. HTCC2649]
gi|84382960|gb|EAP98841.1| putative methyltransferase [Janibacter sp. HTCC2649]
Length=258
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/184 (21%), Positives = 73/184 (40%), Gaps = 35/184 (19%)
Query 64 LLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA--- 120
++++GGG L+ LA G D+T ++P+ + R+ A++R + A
Sbjct 43 VIDLGGGTGGLAVPLAVAGHDVTVVDPSPDALASLRRRA--AEAQASSRVSAVQGDADTL 100
Query 121 EDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPT 180
E + R D +E++D P + +++ VL PG + P
Sbjct 101 ESLVGRDRPDLVLCHGTLEYVDDPQATLAQIAGVLAPGGILSLVVPQR------------ 148
Query 181 FFTKELTCRVMRHR-IEGNTGMDDPKGVWRSLNWITVPKVKRFAAKDATLTLRFHRAMLV 239
+ + R + + ++ +D P G W + VP+ RF RA +V
Sbjct 149 --SAAVIARALAGQFVQALAALDRPDGRWGDAD--PVPR-------------RFDRAGVV 191
Query 240 WMLE 243
++E
Sbjct 192 GLIE 195
>gi|321453645|gb|EFX64861.1| hypothetical protein DAPPUDRAFT_304225 [Daphnia pulex]
Length=283
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/107 (30%), Positives = 52/107 (49%), Gaps = 12/107 (11%)
Query 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGF-------GKFRQLGDIVLELAAARP 113
G ++L+VG G +LS L G +T I+P+ E K R L ++ E+
Sbjct 83 GCSILDVGCGGGILSTSLGRLGASVTGIDPSEENITAASLHANKMR-LQNVTFEVN---- 137
Query 114 TIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGAS 160
TI +A + FD + V+EH++ P ++ +E+LKPG S
Sbjct 138 TIEHFQALNTSLSTTFDAVVASEVIEHVENPKFFIQTCTELLKPGGS 184
>gi|325282833|ref|YP_004255374.1| Methyltransferase type 11 [Deinococcus proteolyticus MRP]
gi|324314642|gb|ADY25757.1| Methyltransferase type 11 [Deinococcus proteolyticus MRP]
Length=247
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/111 (32%), Positives = 49/111 (45%), Gaps = 10/111 (9%)
Query 64 LLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKAEDF 123
+LEVG G +SC LA G D+T +EP+ K R E + T A
Sbjct 35 VLEVGAGTGRVSCFLARRGVDVTGLEPSARMLAKARARA----EESRVDVTWIQGDAAGL 90
Query 124 ISEKRFDFAFS-LNVMEHIDLPDEAVRRVSEV---LKPGASYHF--LCPNY 168
SE+RFD + N + H+ P E + + + L PG + F PNY
Sbjct 91 RSEERFDLIIAPFNALMHLYTPAEQLTSLENLRRHLAPGGRFAFDLYVPNY 141
>gi|225022402|ref|ZP_03711594.1| hypothetical protein CORMATOL_02441 [Corynebacterium matruchotii
ATCC 33806]
gi|224944833|gb|EEG26042.1| hypothetical protein CORMATOL_02441 [Corynebacterium matruchotii
ATCC 33806]
Length=241
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/192 (28%), Positives = 75/192 (40%), Gaps = 25/192 (13%)
Query 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA 120
G +L+VGGG + + AA+G D +EP V E++AA T+A
Sbjct 41 GTRVLDVGGGPGYFAAEFAAQGADYIGLEPD-------------VGEMSAAGITVANSVR 87
Query 121 EDFIS----EKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHF 176
D ++ FD +S NV EHI P + V KPG ++ P+ H
Sbjct 88 GDGMALPFRNNSFDVVYSSNVAEHIPHPWVMGEEMLRVCKPGGLVILSYTVWLGPFGGHE 147
Query 177 NIPTFFTKELTCRVMRHRIEGNTGMDDPKGVWR-SLNWITVPKVKRFA----AKDATLTL 231
F+ L R G PK V+ SL ++ R+A AK TL
Sbjct 148 T--GFWAHYLGGNFARDNYTKKHG-HKPKNVFGISLFDVSCSSGIRWASQTNAKVVTLFP 204
Query 232 RFHRAMLVWMLE 243
R+H W +
Sbjct 205 RYHPKWAWWFVS 216
>gi|321453646|gb|EFX64862.1| hypothetical protein DAPPUDRAFT_204530 [Daphnia pulex]
Length=266
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/109 (31%), Positives = 51/109 (47%), Gaps = 5/109 (4%)
Query 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFG-KFRQLGDIVL-ELAAARPTIAPC 118
G +L+VG G +L+ L G ++T I+P+ E +R I L +A TI
Sbjct 81 GFKVLDVGCGAGILTESLGRLGAEVTGIDPSEENIEVAYRHAKRINLRNVAYEANTIEHF 140
Query 119 KAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPN 167
+ + FD + V+EH+D P+ + + SE LKPG S N
Sbjct 141 QT---CNSTLFDAVIASEVVEHVDNPELFIEKCSESLKPGGSLFITTQN 186
>gi|300949434|ref|ZP_07163438.1| methyltransferase domain protein [Escherichia coli MS 116-1]
gi|300954141|ref|ZP_07166608.1| methyltransferase domain protein [Escherichia coli MS 175-1]
gi|301646947|ref|ZP_07246790.1| methyltransferase domain protein [Escherichia coli MS 146-1]
gi|300318866|gb|EFJ68650.1| methyltransferase domain protein [Escherichia coli MS 175-1]
gi|300451155|gb|EFK14775.1| methyltransferase domain protein [Escherichia coli MS 116-1]
gi|301074872|gb|EFK89678.1| methyltransferase domain protein [Escherichia coli MS 146-1]
gi|345380832|gb|EGX12724.1| methyltransferase domain protein [Escherichia coli G58-1]
Length=396
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/112 (28%), Positives = 51/112 (46%), Gaps = 15/112 (13%)
Query 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA 120
G+ALL G ++ ++ E +IE + FGK+ V + + TI+
Sbjct 46 GSALLMKAGAKRVVGVDISEE-----SIERAKKLFGKYD-----VEYIVSDANTISERYG 95
Query 121 EDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPY 172
EDF FD S+ +EHI+ PD + + + K A ++ CPN + Y
Sbjct 96 EDF-----FDIVVSIETIEHINTPDVFLSSIKKTAKENAIFYITCPNDYWYY 142
>gi|335430142|ref|ZP_08557037.1| methyltransferase type 11 [Haloplasma contractile SSD-17B]
gi|334888558|gb|EGM26855.1| methyltransferase type 11 [Haloplasma contractile SSD-17B]
Length=254
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/123 (25%), Positives = 52/123 (43%), Gaps = 13/123 (10%)
Query 44 ARFARDWLSEDLARLPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGD 103
++ D+LSE GA +L++G G + S LA +G+D+T++EP L
Sbjct 31 TKYITDFLSE-------GAKILDIGAGTGVYSIYLADKGYDVTSVEPVKRN---LECLKS 80
Query 104 IVLELAAARPTIAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSE---VLKPGAS 160
+ E P I + +D ++ + H+ +E +R + E V K G
Sbjct 81 KIKENMTINPFQGNALDLSMIKDDSYDLVLNMGPLYHLKSEEERIRAIQESVRVCKKGGK 140
Query 161 YHF 163
F
Sbjct 141 IFF 143
>gi|158334407|ref|YP_001515579.1| hypothetical protein AM1_1228 [Acaryochloris marina MBIC11017]
gi|158304648|gb|ABW26265.1| hypothetical protein AM1_1228 [Acaryochloris marina MBIC11017]
Length=240
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/57 (37%), Positives = 30/57 (53%), Gaps = 0/57 (0%)
Query 125 SEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYEPHFNIPTF 181
++++ D FS + +EH+ D+ R EV + G Y PN FP EPHF P F
Sbjct 101 ADQQSDIVFSNSTIEHVGDYDDQHRMAQEVKRLGKRYFIQTPNKFFPIEPHFAFPLF 157
>gi|300115071|ref|YP_003761646.1| methyltransferase type 11 [Nitrosococcus watsonii C-113]
gi|299541008|gb|ADJ29325.1| Methyltransferase type 11 [Nitrosococcus watsonii C-113]
Length=255
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/150 (25%), Positives = 61/150 (41%), Gaps = 20/150 (13%)
Query 58 LPVGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAP 117
LP GA +LE+G G + L+ G+ + AI+ V E + P
Sbjct 24 LPEGARILEIGAGAGWQAKLLSEHGYHVNAID---------------VEESRYLSQAVFP 68
Query 118 CKAEDF----ISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNYVFPYE 173
K D ++ FD FS NV+EHI D+ + VLK G S + P + +
Sbjct 69 VKIYDGYKIPFADNTFDIVFSSNVLEHIPHLDKFQDEIKRVLKSGGSAIHIVPTSTWRFW 128
Query 174 PHFNIPTFFTKELTCRVMRHRIEGNTGMDD 203
+ K L+ R +++ + + M +
Sbjct 129 TFLTHHVYIAK-LSFRALKYSVFKFSTMKN 157
>gi|15894015|ref|NP_347364.1| SAM-dependent methyltransferase [Clostridium acetobutylicum ATCC
824]
gi|337735944|ref|YP_004635391.1| SAM-dependent methyltransferase [Clostridium acetobutylicum DSM
1731]
gi|15023609|gb|AAK78704.1|AE007588_2 SAM-dependent methyltransferase [Clostridium acetobutylicum ATCC
824]
gi|325508142|gb|ADZ19778.1| SAM-dependent methyltransferase [Clostridium acetobutylicum EA
2018]
gi|336290264|gb|AEI31398.1| SAM-dependent methyltransferase [Clostridium acetobutylicum DSM
1731]
Length=272
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/93 (31%), Positives = 40/93 (44%), Gaps = 6/93 (6%)
Query 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA 120
A +L+VG G S QLA EG+D+TAIE G R G V + ++
Sbjct 57 NAKILDVGAGTGRYSVQLANEGYDVTAIELVKHNLGVLRSKGSTVKAMQGTALDLSR--- 113
Query 121 EDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSE 153
SE FD M H+ ++ V+ + E
Sbjct 114 ---FSENTFDITLVFGPMYHLYTFEDKVKALKE 143
>gi|221634564|ref|YP_002523252.1| Methyltransferase type 11 [Rhodobacter sphaeroides KD131]
gi|221163437|gb|ACM04399.1| Methyltransferase type 11 [Rhodobacter sphaeroides KD131]
Length=250
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/45 (43%), Positives = 26/45 (58%), Gaps = 0/45 (0%)
Query 124 ISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASYHFLCPNY 168
+ RFD +L+VMEH++ PD+ R V L PG +Y F P Y
Sbjct 122 FEDGRFDLVVTLDVMEHVNEPDKVFREVFRTLVPGGAYLFSVPTY 166
>gi|218510200|ref|ZP_03508078.1| hypothetical protein RetlB5_23674 [Rhizobium etli Brasil 5]
Length=280
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/154 (30%), Positives = 67/154 (44%), Gaps = 24/154 (15%)
Query 22 IRSHVDAHAPELRSLFD--TMAAEARFAR--DW--LSEDLARLPVGAALLEVGGGVLLLS 75
+R D L + +D + A R+ R +W + E L R P A +++G G + S
Sbjct 16 LRQQPDQQKLVLDAYYDDPILQAAERYWRSGEWGAIREFLPRAPGTA--VDIGAGRGIAS 73
Query 76 CQLAAEGFDITAIEPTGE---GFGKFRQLGDIVLELAAARPTIAPCKAEDF-----ISEK 127
LA EGF++TA+EP G G R L + V + AE+F S+
Sbjct 74 YALAKEGFEVTALEPDASDLVGAGAIRALFNEV--------HLPISIAEEFSEKLPFSDN 125
Query 128 RFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGASY 161
FD F+ V+ H A R VLKPG +
Sbjct 126 AFDVVFARAVLHHTSDLSAACREFFRVLKPGGRF 159
>gi|305680305|ref|ZP_07403113.1| methyltransferase domain protein [Corynebacterium matruchotii
ATCC 14266]
gi|305659836|gb|EFM49335.1| methyltransferase domain protein [Corynebacterium matruchotii
ATCC 14266]
Length=260
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/103 (32%), Positives = 45/103 (44%), Gaps = 17/103 (16%)
Query 61 GAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLGDIVLELAAARPTIAPCKA 120
G +L+VGGG + + AA+G D +EP V E++AA T+A
Sbjct 60 GTRVLDVGGGPGYFAAEFAAQGADYIGLEPD-------------VGEMSAAGITVANSVR 106
Query 121 EDFIS----EKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGA 159
D ++ FD +S NV EHI P + V KPG
Sbjct 107 GDGMALPFRNNSFDVVYSSNVAEHIPHPWVMGEEMLRVCKPGG 149
>gi|190891229|ref|YP_001977771.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli CIAT
652]
gi|190696508|gb|ACE90593.1| probable 3-demethylubiquinone-9 3-methyltransferase protein [Rhizobium
etli CIAT 652]
Length=210
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/99 (30%), Positives = 50/99 (51%), Gaps = 10/99 (10%)
Query 63 ALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLG-DIVLELAAARPTIAPCKAE 121
A+ ++G G + LAA+G+D+ ++P+ +G K R + D+ LE+ + E
Sbjct 41 AVFDLGCGTGGAASVLAAKGYDVVGVDPSEDGIAKARAVHPDLPLEIGSGY--------E 92
Query 122 DFISE-KRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGA 159
D S FD SL V+EH+ P + +++KPG
Sbjct 93 DLSSRYGTFDAVISLEVVEHVYDPKAFTATMYDLVKPGG 131
>gi|239908568|ref|YP_002955310.1| putative 3-demethylubiquinone-9 3-methyltransferase [Desulfovibrio
magneticus RS-1]
gi|239798435|dbj|BAH77424.1| putative 3-demethylubiquinone-9 3-methyltransferase [Desulfovibrio
magneticus RS-1]
Length=264
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/105 (31%), Positives = 48/105 (46%), Gaps = 13/105 (12%)
Query 60 VGAALLEVGGGVLLLSCQLAAEGFDITAIEPTGEGFGKFRQLG-----DIVLELAAARPT 114
GA +L+VG G LL+ + A G +T ++P E R DIV +
Sbjct 52 TGATMLDVGCGGGLLAEEFARMGLRVTGVDPAPESVATARTHAAEAGFDIVYRVGRG--- 108
Query 115 IAPCKAEDFISEKRFDFAFSLNVMEHIDLPDEAVRRVSEVLKPGA 159
+A F+ E FD +V+EH+D P + ++ VLKPG
Sbjct 109 ----EALPFVDEA-FDAVACCDVLEHVDEPAAVIAEMARVLKPGG 148
Lambda K H
0.326 0.139 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 483318443120
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40