BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1513
Length=243
Score E
Sequences producing significant alignments: (Bits) Value
gi|308231860|ref|ZP_07414041.2| hypothetical protein TMAG_02843 ... 493 1e-137
gi|15608651|ref|NP_216029.1| hypothetical protein Rv1513 [Mycoba... 492 2e-137
gi|289447123|ref|ZP_06436867.1| conserved hypothetical protein [... 490 6e-137
gi|340626532|ref|YP_004744984.1| hypothetical protein MCAN_15341... 477 5e-133
gi|323719960|gb|EGB29072.1| hypothetical protein TMMG_00773 [Myc... 473 1e-131
gi|240171779|ref|ZP_04750438.1| hypothetical protein MkanA1_2086... 346 1e-93
gi|15610093|ref|NP_217472.1| hypothetical protein Rv2956 [Mycoba... 340 8e-92
gi|31794132|ref|NP_856625.1| hypothetical protein Mb2980 [Mycoba... 339 3e-91
gi|289755071|ref|ZP_06514449.1| conserved hypothetical protein [... 338 4e-91
gi|289448624|ref|ZP_06438368.1| conserved hypothetical protein [... 338 5e-91
gi|294996482|ref|ZP_06802173.1| hypothetical protein Mtub2_18756... 337 7e-91
gi|289571150|ref|ZP_06451377.1| conserved hypothetical protein [... 337 7e-91
gi|41407331|ref|NP_960167.1| hypothetical protein MAP1233 [Mycob... 325 3e-87
gi|3550480|emb|CAA11577.1| gsc [Mycobacterium avium subsp. parat... 325 4e-87
gi|336457967|gb|EGO36955.1| methyltransferase, FkbM family [Myco... 325 4e-87
gi|254775704|ref|ZP_05217220.1| hypothetical protein MaviaA2_137... 324 8e-87
gi|289746755|ref|ZP_06506133.1| conserved hypothetical protein [... 305 4e-81
gi|159028936|emb|CAO87397.1| unnamed protein product [Microcysti... 208 7e-52
gi|333982907|ref|YP_004512117.1| methyltransferase FkbM family [... 196 2e-48
gi|296170617|ref|ZP_06852193.1| conserved hypothetical protein [... 189 3e-46
gi|311744524|ref|ZP_07718324.1| methyltransferase [Aeromicrobium... 175 5e-42
gi|332667368|ref|YP_004450156.1| FkbM family methyltransferase [... 166 3e-39
gi|323718428|gb|EGB27601.1| hypothetical protein TMMG_03479 [Myc... 142 4e-32
gi|311744534|ref|ZP_07718334.1| methyltransferase FkbM [Aeromicr... 134 1e-29
gi|291303745|ref|YP_003515023.1| methyltransferase FkbM family [... 130 2e-28
gi|311746616|ref|ZP_07720401.1| methyltransferase [Algoriphagus ... 112 6e-23
gi|302547620|ref|ZP_07299962.1| putative LigA [Streptomyces hygr... 111 1e-22
gi|119474953|ref|ZP_01615306.1| hypothetical protein GP2143_1407... 110 1e-22
gi|270341303|dbj|BAI53084.1| putative O-methyltransferase [Strep... 108 9e-22
gi|332525295|ref|ZP_08401464.1| methyltransferase FkbM family pr... 107 1e-21
gi|294011502|ref|YP_003544962.1| SAM-dependent methyltransferase... 107 2e-21
gi|307133565|dbj|BAJ19055.1| putative methyltransferase [Strepto... 106 3e-21
gi|345137144|dbj|BAK66753.1| hypothetical protein SLG_20780 [Sph... 105 4e-21
gi|94498710|ref|ZP_01305260.1| hypothetical protein SKA58_11615 ... 105 5e-21
gi|26546923|gb|AAN05766.1| unknown [Mycobacterium avium] 103 2e-20
gi|334344866|ref|YP_004553418.1| FkbM family methyltransferase [... 102 4e-20
gi|209967250|ref|YP_002300165.1| methyltransferase, FkbM family,... 100 2e-19
gi|77165008|ref|YP_343533.1| methyltransferase FkbM [Nitrosococc... 98.6 7e-19
gi|170077759|ref|YP_001734397.1| methyltransferase, FkbM family ... 97.4 1e-18
gi|319760824|ref|YP_004124761.1| methyltransferase fkbm family [... 95.9 5e-18
gi|257092580|ref|YP_003166221.1| FkbM family methyltransferase [... 93.6 2e-17
gi|289763134|ref|ZP_06522512.1| conserved hypothetical protein [... 89.4 4e-16
gi|206601978|gb|EDZ38460.1| Methyltransferase, FkbM family [Lept... 89.4 5e-16
gi|220935263|ref|YP_002514162.1| methyltransferase FkbM [Thioalk... 89.0 6e-16
gi|85374467|ref|YP_458529.1| methyltransferase, FkbM family prot... 88.6 7e-16
gi|189218559|ref|YP_001939200.1| SAM-dependent methyltransferase... 87.8 1e-15
gi|220935273|ref|YP_002514172.1| hypothetical protein Tgr7_2105 ... 87.4 2e-15
gi|124515961|gb|EAY57470.1| Methyltransferase, FkbM family [Lept... 86.3 4e-15
gi|108797916|ref|YP_638113.1| methyltransferase FkbM [Mycobacter... 85.9 5e-15
gi|256421318|ref|YP_003121971.1| methyltransferase FkbM family [... 85.9 5e-15
>gi|308231860|ref|ZP_07414041.2| hypothetical protein TMAG_02843 [Mycobacterium tuberculosis SUMu001]
gi|308369461|ref|ZP_07417862.2| hypothetical protein TMBG_00067 [Mycobacterium tuberculosis SUMu002]
gi|308370740|ref|ZP_07422576.2| hypothetical protein TMCG_03627 [Mycobacterium tuberculosis SUMu003]
15 more sequence titles
Length=270
Score = 493 bits (1268), Expect = 1e-137, Method: Compositional matrix adjust.
Identities = 243/243 (100%), Positives = 243/243 (100%), Gaps = 0/243 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA
Sbjct 28 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 87
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM
Sbjct 88 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 147
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH
Sbjct 148 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 207
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR
Sbjct 208 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 267
Query 241 GSD 243
GSD
Sbjct 268 GSD 270
>gi|15608651|ref|NP_216029.1| hypothetical protein Rv1513 [Mycobacterium tuberculosis H37Rv]
gi|15840979|ref|NP_336016.1| hypothetical protein MT1563 [Mycobacterium tuberculosis CDC1551]
gi|148661309|ref|YP_001282832.1| hypothetical protein MRA_1525 [Mycobacterium tuberculosis H37Ra]
49 more sequence titles
Length=243
Score = 492 bits (1267), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 243/243 (100%), Positives = 243/243 (100%), Gaps = 0/243 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA
Sbjct 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM
Sbjct 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH
Sbjct 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR
Sbjct 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
Query 241 GSD 243
GSD
Sbjct 241 GSD 243
>gi|289447123|ref|ZP_06436867.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289420081|gb|EFD17282.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=243
Score = 490 bits (1262), Expect = 6e-137, Method: Compositional matrix adjust.
Identities = 242/243 (99%), Positives = 242/243 (99%), Gaps = 0/243 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
MRLAR ARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA
Sbjct 1 MRLARHARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM
Sbjct 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH
Sbjct 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR
Sbjct 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
Query 241 GSD 243
GSD
Sbjct 241 GSD 243
>gi|340626532|ref|YP_004744984.1| hypothetical protein MCAN_15341 [Mycobacterium canettii CIPT
140010059]
gi|340004722|emb|CCC43866.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=244
Score = 477 bits (1228), Expect = 5e-133, Method: Compositional matrix adjust.
Identities = 235/241 (98%), Positives = 238/241 (99%), Gaps = 0/241 (0%)
Query 3 LARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGF 62
LARRARNILRRNG++VSRYF ELDWERNF+RQLQSHRVS VLDVGANSGQYARGLRGAGF
Sbjct 4 LARRARNILRRNGLDVSRYFPELDWERNFMRQLQSHRVSVVLDVGANSGQYARGLRGAGF 63
Query 63 AGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLK 122
AGRIVSFEPLPGPFA LQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLK
Sbjct 64 AGRIVSFEPLPGPFAGLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLK 123
Query 123 RHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDR 182
RHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDR
Sbjct 124 RHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDR 183
Query 183 CVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGS 242
CVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGS
Sbjct 184 CVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGS 243
Query 243 D 243
D
Sbjct 244 D 244
>gi|323719960|gb|EGB29072.1| hypothetical protein TMMG_00773 [Mycobacterium tuberculosis CDC1551A]
Length=233
Score = 473 bits (1216), Expect = 1e-131, Method: Compositional matrix adjust.
Identities = 232/233 (99%), Positives = 233/233 (100%), Gaps = 0/233 (0%)
Query 11 LRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFE 70
+RRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFE
Sbjct 1 MRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFE 60
Query 71 PLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPP 130
PLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPP
Sbjct 61 PLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPP 120
Query 131 ANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLEL 190
ANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLEL
Sbjct 121 ANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLEL 180
Query 191 SFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 243
SFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD
Sbjct 181 SFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 233
>gi|240171779|ref|ZP_04750438.1| hypothetical protein MkanA1_20865 [Mycobacterium kansasii ATCC
12478]
Length=243
Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/243 (70%), Positives = 193/243 (80%), Gaps = 0/243 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M L+ AR I+R EV R ++E D F++QL+ RV V DVGAN+GQYA+GLR A
Sbjct 1 MHLSDLARFIVRSAAFEVPRRYSERDLRHQFVKQLELRRVDVVFDVGANTGQYAKGLRRA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
G+ GRIVSFEPL PF L+R A TDPLW+CR+CALGD DGT+S+NVAGN G SSSVLPM
Sbjct 61 GYKGRIVSFEPLSRPFTTLERKAVTDPLWDCRQCALGDADGTVSVNVAGNAGQSSSVLPM 120
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
L RHQ+AFPPANYVG + PIHRLDSVA + LRPN AFLK+DVQGFEKQV+ G STV+
Sbjct 121 LTRHQEAFPPANYVGTEEAPIHRLDSVAPEFLRPNGAAFLKVDVQGFEKQVLDGAKSTVN 180
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
D+CVGMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D RNGRMLQADGIFFR
Sbjct 181 DQCVGMQLELSFAPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDARNGRMLQADGIFFR 240
Query 241 GSD 243
++
Sbjct 241 DAN 243
>gi|15610093|ref|NP_217472.1| hypothetical protein Rv2956 [Mycobacterium tuberculosis H37Rv]
gi|15842505|ref|NP_337542.1| hypothetical protein MT3030 [Mycobacterium tuberculosis CDC1551]
gi|148662803|ref|YP_001284326.1| hypothetical protein MRA_2983 [Mycobacterium tuberculosis H37Ra]
61 more sequence titles
Length=243
Score = 340 bits (873), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 167/243 (69%), Positives = 190/243 (79%), Gaps = 0/243 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M+ + AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
+ GRIVSFEPL GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQ+AFPPANYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
D CVGMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
Query 241 GSD 243
D
Sbjct 241 EDD 243
>gi|31794132|ref|NP_856625.1| hypothetical protein Mb2980 [Mycobacterium bovis AF2122/97]
gi|121638837|ref|YP_979061.1| hypothetical protein BCG_2977 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991329|ref|YP_002646018.1| hypothetical protein JTY_2972 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31619727|emb|CAD96667.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121494485|emb|CAL72966.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774444|dbj|BAH27250.1| hypothetical protein JTY_2972 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341602876|emb|CCC65554.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=243
Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/243 (69%), Positives = 189/243 (78%), Gaps = 0/243 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M+ + AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
+ GRIVSFEPL GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQ+AFPPANYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
D CVGMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADG FFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGTFFR 240
Query 241 GSD 243
D
Sbjct 241 EDD 243
>gi|289755071|ref|ZP_06514449.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289695658|gb|EFD63087.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=243
Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 166/243 (69%), Positives = 189/243 (78%), Gaps = 0/243 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M+ + AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
+ GRIVSFEPL GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQRSSVLPM 120
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQ+AFPPANYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
D CVGMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
Query 241 GSD 243
D
Sbjct 241 EDD 243
>gi|289448624|ref|ZP_06438368.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289421582|gb|EFD18783.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=243
Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 166/243 (69%), Positives = 189/243 (78%), Gaps = 0/243 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M+ + AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
+ GRIVSFEPL GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQ+AFPPANYV Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+
Sbjct 121 LKSHQNAFPPANYVDTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
D CVGMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
Query 241 GSD 243
D
Sbjct 241 EDD 243
>gi|294996482|ref|ZP_06802173.1| hypothetical protein Mtub2_18756 [Mycobacterium tuberculosis
210]
Length=165
Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 164/165 (99%), Positives = 165/165 (100%), Gaps = 0/165 (0%)
Query 79 LQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQR 138
+QRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQR
Sbjct 1 MQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQR 60
Query 139 VPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEG 198
VPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEG
Sbjct 61 VPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEG 120
Query 199 GMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 243
GMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD
Sbjct 121 GMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 165
>gi|289571150|ref|ZP_06451377.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289544904|gb|EFD48552.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=243
Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 166/243 (69%), Positives = 189/243 (78%), Gaps = 0/243 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M+ + AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
+ GRIVSFEPL GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQ+AFPPANYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+A G ST+
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLARGKSTID 180
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
D CVGMQLELSF PLYEGGMLI EALDLV SLGFTL+GL P F D NGRMLQADGIFFR
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGLLPCFIDANNGRMLQADGIFFR 240
Query 241 GSD 243
D
Sbjct 241 EDD 243
>gi|41407331|ref|NP_960167.1| hypothetical protein MAP1233 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395683|gb|AAS03550.1| hypothetical protein MAP_1233 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=240
Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/243 (67%), Positives = 188/243 (78%), Gaps = 3/243 (1%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M R A + R E+ R+F + +R + Q +++ V+ V+DVGANSGQ+ LR A
Sbjct 1 MDFLRNAGLMARNVSTEMLRHF---ERKRLLVNQFKAYGVNVVIDVGANSGQFGSALRRA 57
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
GF RIVSFEPL GPFA L R +++DPLWEC + ALGD D TI+INVAGN GASSSVLPM
Sbjct 58 GFKSRIVSFEPLSGPFAQLTRKSASDPLWECHQYALGDADETITINVAGNAGASSSVLPM 117
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQDAFPPANY+G + V IHRLDSVA++ L P D+ FLKIDVQGFEKQVIAG ST++
Sbjct 118 LKSHQDAFPPANYIGTEDVAIHRLDSVASEFLNPTDVTFLKIDVQGFEKQVIAGSKSTLN 177
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
+ CVGMQLELSF PLYEG MLI EAL+LV SLGF L+GL PGFTDPRNGRMLQADGIFFR
Sbjct 178 ESCVGMQLELSFIPLYEGDMLIHEALELVYSLGFRLTGLLPGFTDPRNGRMLQADGIFFR 237
Query 241 GSD 243
G D
Sbjct 238 GDD 240
>gi|3550480|emb|CAA11577.1| gsc [Mycobacterium avium subsp. paratuberculosis]
Length=240
Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 161/243 (67%), Positives = 188/243 (78%), Gaps = 3/243 (1%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M R A + R E+ R+F + +R + Q +++ V+ V+DVGANSGQ+ LR A
Sbjct 1 MDFLRNAGLMARNVSTEMLRHF---ERKRLLVNQFKAYGVNVVIDVGANSGQFGSALRRA 57
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
GF RIVSFEPL GPFA L R +++DPLWEC + ALGD D TI+INVAGN GASSSVLPM
Sbjct 58 GFKSRIVSFEPLSGPFAQLTRESASDPLWECHQYALGDADETITINVAGNAGASSSVLPM 117
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQDAFPPANY+G + V IHRLDSVA++ L P D+ FLKIDVQGFEKQVIAG ST++
Sbjct 118 LKSHQDAFPPANYIGTEDVAIHRLDSVASEFLNPTDVTFLKIDVQGFEKQVIAGSKSTLN 177
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
+ CVGMQLELSF PLYEG MLI EAL+LV SLGF L+GL PGFTDPRNGRMLQADGIFFR
Sbjct 178 ESCVGMQLELSFIPLYEGDMLIHEALELVYSLGFRLTGLLPGFTDPRNGRMLQADGIFFR 237
Query 241 GSD 243
G D
Sbjct 238 GDD 240
>gi|336457967|gb|EGO36955.1| methyltransferase, FkbM family [Mycobacterium avium subsp. paratuberculosis
S397]
Length=240
Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 161/243 (67%), Positives = 188/243 (78%), Gaps = 3/243 (1%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M R A + R E+ R+F + +R + Q +++ V+ V+DVGANSGQ+ LR A
Sbjct 1 MDFLRNAGLMARNVSTEMLRHF---ERKRLLVNQFKAYGVNVVIDVGANSGQFGSALRRA 57
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
GF RIVSFEPL GPFA L R +++DPLWEC + ALGD D TI+INVAGN GASSSVLPM
Sbjct 58 GFKSRIVSFEPLSGPFAQLARKSASDPLWECHQYALGDADETITINVAGNAGASSSVLPM 117
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQDAFPPANY+G + V IHRLDSVA++ L P D+ FLKIDVQGFEKQVIAG ST++
Sbjct 118 LKSHQDAFPPANYIGTEDVAIHRLDSVASEFLNPTDVTFLKIDVQGFEKQVIAGSKSTLN 177
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
+ CVGMQLELSF PLYEG MLI EAL+LV SLGF L+GL PGFTDPRNGRMLQADGIFFR
Sbjct 178 ESCVGMQLELSFIPLYEGDMLIHEALELVYSLGFRLTGLLPGFTDPRNGRMLQADGIFFR 237
Query 241 GSD 243
G D
Sbjct 238 GDD 240
>gi|254775704|ref|ZP_05217220.1| hypothetical protein MaviaA2_13700 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|5524328|gb|AAD44221.1|AF143772_27 unknown [Mycobacterium avium]
gi|3550475|emb|CAA11573.1| gsc [Mycobacterium avium subsp. silvaticum]
gi|4416475|gb|AAD20375.1| unknown [Mycobacterium avium]
Length=240
Score = 324 bits (830), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 160/243 (66%), Positives = 187/243 (77%), Gaps = 3/243 (1%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M R A + R E+ R+F + +R + Q +++ V+ V+DVGANSGQ+ LR A
Sbjct 1 MDFLRNAGLMARNVSTEMLRHF---ERKRLLVNQFKAYGVNVVIDVGANSGQFGSALRRA 57
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
GF RIVSFEPL GPFA L R +++DPLWEC + ALGD D TI+INVAGN GASSSVLPM
Sbjct 58 GFKSRIVSFEPLSGPFAQLTRKSASDPLWECHQYALGDADETITINVAGNAGASSSVLPM 117
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQDAFPPANY+G + V IHRLDSVA++ L P D+ FLKIDVQGFEKQVI G ST++
Sbjct 118 LKSHQDAFPPANYIGTEDVAIHRLDSVASEFLNPTDVTFLKIDVQGFEKQVITGSKSTLN 177
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
+ CVGMQLELSF PLYEG MLI EAL+LV SLGF L+GL PGFTDPRNGRMLQADGIFFR
Sbjct 178 ESCVGMQLELSFIPLYEGDMLIHEALELVYSLGFRLTGLLPGFTDPRNGRMLQADGIFFR 237
Query 241 GSD 243
G D
Sbjct 238 GDD 240
>gi|289746755|ref|ZP_06506133.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289687283|gb|EFD54771.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=542
Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/219 (69%), Positives = 173/219 (79%), Gaps = 0/219 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M+ + AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPM 120
+ GRIVSFEPL GPF +L+ ASTDPLW+CR+ ALGD DGT++IN+AGN G SSSVLPM
Sbjct 61 AYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGDSDGTVTINIAGNAGQSSSVLPM 120
Query 121 LKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVH 180
LK HQ+AFPPANYVG Q IHRLDSVA + L N +AFLK+DVQGFEKQV+AGG ST+
Sbjct 121 LKSHQNAFPPANYVGTQEASIHRLDSVAPEFLGMNGVAFLKVDVQGFEKQVLAGGKSTID 180
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGL 219
D CVGMQLELSF PLYEGGMLI EALDLV SLGFTL+GL
Sbjct 181 DHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGFTLTGL 219
>gi|159028936|emb|CAO87397.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length=241
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 107/240 (45%), Positives = 151/240 (63%), Gaps = 4/240 (1%)
Query 3 LARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGF 62
L + + + R GI++ RY + R L H + V DVGAN GQYA+ LR G+
Sbjct 2 LKKIVKKLSRSLGIDLKRYNVQTSEAAKMQRLLAYHNIDLVFDVGANIGQYAKLLRELGY 61
Query 63 AGRIVSFEPLPGPFAVLQRSASTDPLWECR-RCALGDVDGTISINVAGNEGASSSVLPML 121
+GRIVSFEPL ++ L+ + DPLWE + A+G+ +G I IN+AGN SSS LPML
Sbjct 62 SGRIVSFEPLSSAYSQLKAVSEKDPLWEIAPQTAIGNQEGEIIINIAGN-SQSSSALPML 120
Query 122 KRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIA-FLKIDVQGFEKQVIAGGDSTVH 180
H + P + Y G++ V + RLD++A D ++ + FLKIDVQG EKQV+ G + +
Sbjct 121 DAHVQSAPESAYSGSETVKLSRLDTLAKDYIKSETKSIFLKIDVQGLEKQVLEGA-TAIL 179
Query 181 DRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
G++LELS PLYEG +L +E + +V+ LG+ L G++PGFT + GRMLQ DGIFF+
Sbjct 180 PLVKGIKLELSLVPLYEGQVLFKEMIHIVEKLGYELYGIEPGFTAEKTGRMLQMDGIFFK 239
>gi|333982907|ref|YP_004512117.1| methyltransferase FkbM family [Methylomonas methanica MC09]
gi|333806948|gb|AEF99617.1| methyltransferase FkbM family [Methylomonas methanica MC09]
Length=243
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/241 (47%), Positives = 149/241 (62%), Gaps = 3/241 (1%)
Query 3 LARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGF 62
L + R LR+ G ++ R + L+ L+ +V V D+GAN+GQ+A LR G+
Sbjct 2 LKKLIRGGLRKVGFDLHRLLTVSNPAFQLLKGLERFQVDLVFDIGANTGQFASELRRIGY 61
Query 63 AGRIVSFEPLPGPFAVLQRSASTDPLWECR-RCALGDVDGTISINVAGNEGASSSVLPML 121
G++VSFEPL VL+++A DP W +CA+GD DG I INVAGN SSSVLPML
Sbjct 62 KGQLVSFEPLSVAHRVLKKTAERDPGWIVHEQCAIGDTDGEIEINVAGNS-VSSSVLPML 120
Query 122 KRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHD 181
H A + YVG++ V I+RLDSVA L+ ++ F+K+D QG+E QV+ GG T
Sbjct 121 DIHSFAAKGSAYVGSEMVAINRLDSVAPSYLQNSNRYFVKVDTQGYEWQVLDGGRETFA- 179
Query 182 RCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRG 241
+ G+ ELS PLYEG L + L ++S GFTL +Q GFTDPR+GR LQ D +FFR
Sbjct 180 KAQGVLCELSLTPLYEGQRLWMDMLQRLNSEGFTLWSIQKGFTDPRDGRTLQVDAVFFRE 239
Query 242 S 242
S
Sbjct 240 S 240
>gi|296170617|ref|ZP_06852193.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894708|gb|EFG74441.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=124
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/121 (78%), Positives = 101/121 (84%), Gaps = 0/121 (0%)
Query 120 MLKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTV 179
MLK HQ+AFPPANY+G + V I RLDSVA DVL D FLKIDVQGFE+QV+AG STV
Sbjct 1 MLKSHQEAFPPANYIGTEDVLIRRLDSVAPDVLGSADQFFLKIDVQGFERQVLAGAKSTV 60
Query 180 HDRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFF 239
DRCVGMQLELSF PLYEGGML REALDLV+S GFTL GL PGF DPR+GRMLQADGIFF
Sbjct 61 ADRCVGMQLELSFFPLYEGGMLFREALDLVESFGFTLMGLIPGFADPRDGRMLQADGIFF 120
Query 240 R 240
R
Sbjct 121 R 121
>gi|311744524|ref|ZP_07718324.1| methyltransferase [Aeromicrobium marinum DSM 15272]
gi|311312143|gb|EFQ82060.1| methyltransferase [Aeromicrobium marinum DSM 15272]
Length=241
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/232 (49%), Positives = 134/232 (58%), Gaps = 12/232 (5%)
Query 11 LRRNGIEVSRYFAELDWERNFLRQ--LQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVS 68
L R G E+ R+ A RQ L H V VLDVGA G Y LR G+ G IVS
Sbjct 15 LGRRGFELRRHSA-------VRRQSVLTRHGVDLVLDVGAAGGGYGSSLRAFGYTGDIVS 67
Query 69 FEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAF 128
FEPL PFA L + DP W R ALG G + INVA N SSS+LPML H DA
Sbjct 68 FEPLSTPFADLGAVIAGDPRWTARNVALGQEAGEVVINVASNS-TSSSILPMLDAHVDAA 126
Query 129 PPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQL 188
P YVG + V + RLD A +V+ + FLKID QGFE++V+AGG TV CVG+QL
Sbjct 127 PQVTYVGTETVTVARLDDEAREVVAGHRRPFLKIDTQGFEREVLAGGADTVA-ACVGLQL 185
Query 189 ELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
ELS PLY GGMLI EA+ GF + GL+ G+ P G +LQ DG+F R
Sbjct 186 ELSLVPLYGGGMLIDEAVSWAYDHGFRMVGLEQGYAAP-TGEILQIDGVFVR 236
>gi|332667368|ref|YP_004450156.1| FkbM family methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332336182|gb|AEE53283.1| methyltransferase FkbM family [Haliscomenobacter hydrossis DSM
1100]
Length=239
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/233 (37%), Positives = 134/233 (58%), Gaps = 4/233 (1%)
Query 8 RNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIV 67
+ L++ G +++Y E D R ++ + ++ + V DVGAN GQYAR +R G+ +I+
Sbjct 6 QKFLKKRGFYITQYPDE-DMSRR-MKIISTNHIDVVFDVGANIGQYARKMRAYGYNKKII 63
Query 68 SFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDA 127
SFEPL F L+ A+ D W ALGD D IN++ N SSS+L +L H D+
Sbjct 64 SFEPLHSAFEQLKIVAAKDNNWILNNYALGDEDVKSVINISDN-SYSSSILNILPTHLDS 122
Query 128 FPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQ 187
P + Y+ + + I ++D++ D +KID QG+EK VI G +++ D+ +Q
Sbjct 123 APQSKYIAKEEIEIKKIDTIFDSFCNNGDNVMVKIDTQGYEKNVIDGATASL-DKIKVIQ 181
Query 188 LELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
LE+S PLYE ML + ++ +D GF L L+ GF+D G++LQ DGIF +
Sbjct 182 LEMSILPLYENEMLYMDMINYLDKQGFQLFSLENGFSDENTGQLLQVDGIFVQ 234
>gi|323718428|gb|EGB27601.1| hypothetical protein TMMG_03479 [Mycobacterium tuberculosis CDC1551A]
Length=90
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/89 (79%), Positives = 75/89 (85%), Gaps = 0/89 (0%)
Query 155 NDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSLGF 214
N +AFLK+DVQGFEKQV+AGG ST+ D CVGMQLELSF PLYEGGMLI EALDLV SLGF
Sbjct 2 NGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEGGMLIPEALDLVYSLGF 61
Query 215 TLSGLQPGFTDPRNGRMLQADGIFFRGSD 243
TL+GL P F D NGRMLQADGIFFR D
Sbjct 62 TLTGLLPCFIDANNGRMLQADGIFFREDD 90
>gi|311744534|ref|ZP_07718334.1| methyltransferase FkbM [Aeromicrobium marinum DSM 15272]
gi|311312153|gb|EFQ82070.1| methyltransferase FkbM [Aeromicrobium marinum DSM 15272]
Length=248
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/236 (38%), Positives = 126/236 (54%), Gaps = 7/236 (2%)
Query 8 RNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIV 67
R L+R +E+ R + +R L S + VLD+GAN GQYA R AGF GRI+
Sbjct 19 RRTLQRADLEIGRG----SYASRLVRTLDSRGIDTVLDIGANVGQYATLTRSAGFGGRII 74
Query 68 SFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDA 127
S EPL G +A + R A+ D W A+G GT +INV+ N SSS+ M H DA
Sbjct 75 SCEPLSGAYAEISRRAAHDDRWTALNVAVGAEPGTATINVSENS-YSSSLRDMTSAHLDA 133
Query 128 FPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQ 187
P + ++ + VP+ + + A LKID QGFE +V+ G + + +Q
Sbjct 134 APQSRFIATEEVPVTTVTEIVTTHGVDPSRALLKIDTQGFEGEVLRGAGDLIG-QVAAIQ 192
Query 188 LELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD 243
LELSF LY +L E + + + G+ + L+ G +D +GRMLQ DG+F R +D
Sbjct 193 LELSFVELYADQLLFDELVAQMAADGYRIQQLETGISDA-SGRMLQVDGLFVRRAD 247
>gi|291303745|ref|YP_003515023.1| methyltransferase FkbM family [Stackebrandtia nassauensis DSM
44728]
gi|290572965|gb|ADD45930.1| methyltransferase FkbM family [Stackebrandtia nassauensis DSM
44728]
Length=318
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/218 (36%), Positives = 120/218 (56%), Gaps = 13/218 (5%)
Query 29 RNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPL 88
R+ L+ +RV+ V DVGAN GQYA+ LR G+ GRIVSFEP+P L+ +A DP
Sbjct 101 RHVAELLRHYRVNCVFDVGANVGQYAKNLRKFGYTGRIVSFEPVPHIAEKLRAAAEGDPD 160
Query 89 WECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVA 148
W+ +CALG G++++NV +G+ SS+L + N + VP+HRLD++
Sbjct 161 WQVHQCALGREAGSVTMNVV--KGSMSSILGPTDFGSTRYKRFNNIDKVDVPVHRLDAIM 218
Query 149 ADVL------RPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLI 202
+ + RP +LK+D QG + + AG V + VGMQ E++ +YEG +
Sbjct 219 DEAMAGLDDPRP----YLKLDTQGLDLEAFAGTGDRVK-QLVGMQSEVALMHIYEGMPGM 273
Query 203 REALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
EAL + GF ++G+ P + R+L+ D + R
Sbjct 274 MEALGVYTEAGFEITGMYPVSREQTTKRVLEFDCVMAR 311
>gi|311746616|ref|ZP_07720401.1| methyltransferase [Algoriphagus sp. PR1]
gi|126578278|gb|EAZ82442.1| methyltransferase [Algoriphagus sp. PR1]
Length=244
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/236 (35%), Positives = 115/236 (49%), Gaps = 27/236 (11%)
Query 14 NGIEVSRYFAELDWERNFLRQ---LQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFE 70
NGI+V E NFL + + + +S +LD+GAN GQ+A R +I SFE
Sbjct 24 NGIKV---------EYNFLEKHSWIVKYNISTILDIGANKGQFAARFRILFPKAKIYSFE 74
Query 71 PLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGA-SSSVLPMLKRHQDAFP 129
P+P F L D ++ LG+ G I+ NE + SSS PM H+ FP
Sbjct 75 PIPEIFEHLCARFKLDENFKAFNLGLGNKSG--KIDFFQNEFSDSSSAFPMKGLHKSNFP 132
Query 130 PANYVGAQRVPIHRLDSVAADVLRPNDIAF-----LKIDVQGFEKQVIAGGDSTVHDRCV 184
+ R+ + RLD V NDI+F +KIDVQGFE+ VI GG T+ +
Sbjct 133 KTIHEKQIRIDVERLDDVM------NDISFAQPLLIKIDVQGFEEMVILGGLKTLSKAEI 186
Query 185 GMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
+ +E+SF LYE + + + SL F+ G P +G +LQAD IF R
Sbjct 187 VI-VEVSFFELYENQVYFETIYNHMKSLFFSFKGNFEQLISPIDGCVLQADAIFVR 241
>gi|302547620|ref|ZP_07299962.1| putative LigA [Streptomyces hygroscopicus ATCC 53653]
gi|302465238|gb|EFL28331.1| putative LigA [Streptomyces himastatinicus ATCC 53653]
Length=327
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/214 (34%), Positives = 112/214 (53%), Gaps = 13/214 (6%)
Query 35 LQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRC 94
L+ + V+ V DVGAN+GQY R LR G+ GRIVSFEP F L+++A DP W
Sbjct 117 LEKYEVNCVFDVGANAGQYGRRLRQLGYTGRIVSFEPTEEAFGKLEKAAKDDPEWWVFPF 176
Query 95 ALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVAADVL-- 152
ALG + T S++V +S+L ++ + + + I RLDSV L
Sbjct 177 ALGREEATQSMHVGW--ATMNSLLGASDYGKERYRRFAKDRTEEIEIRRLDSVMDKALAG 234
Query 153 ----RPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDL 208
RP +LK+D QG++ +V AG + + VG+Q E++ LYEG + EA+
Sbjct 235 LTDPRP----YLKMDTQGYDLEVFAGAGERIEE-FVGLQSEVAVLRLYEGSPGMSEAVAA 289
Query 209 VDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGS 242
+ GF ++G+ P + GR+++ D + R +
Sbjct 290 YEDSGFGITGMYPVTREDTTGRVVEFDCVMMRAA 323
>gi|119474953|ref|ZP_01615306.1| hypothetical protein GP2143_14076 [marine gamma proteobacterium
HTCC2143]
gi|119451156|gb|EAW32389.1| hypothetical protein GP2143_14076 [marine gamma proteobacterium
HTCC2143]
Length=241
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/226 (30%), Positives = 117/226 (52%), Gaps = 13/226 (5%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M+L ++ I + G E+ + + + + +++ V+D GAN GQ+ + LR A
Sbjct 1 MKLHKK---IAKTFGYELIKRKKHPSSNTHLINLINEYKIDLVIDAGANVGQFGKMLRAA 57
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGAS-SSVLP 119
G+ I SFEP+ F L + DP W+ CALG+ G I +N+ EG+ SS+LP
Sbjct 58 GYKEEIHSFEPISTTFIKLMEAIQPDPNWQAYPCALGEALGEIEVNIM--EGSDLSSILP 115
Query 120 MLKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIA----FLKIDVQGFEKQVIAGG 175
+ ++ + + + V + +++ + ++ D A FLK+D QG++ V G
Sbjct 116 PNEFGKENYKHIKVLDTETVTVRTVENFLTEDIK--DCAQRRIFLKMDTQGYDLNVFKGA 173
Query 176 DSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQP 221
+ D +G++ E+SF P+YEG E+L + + GF ++GL P
Sbjct 174 GEKL-DFIIGIESEISFMPIYEGMPHYLESLKVYEDAGFVITGLYP 218
>gi|270341303|dbj|BAI53084.1| putative O-methyltransferase [Streptomyces griseus]
Length=244
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/207 (34%), Positives = 101/207 (49%), Gaps = 3/207 (1%)
Query 33 RQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECR 92
R+L + V+D GAN GQYA+ +R GF G I SFEP F VL +A +D W C
Sbjct 26 RRLLLQDIDVVIDGGANGGQYAKWMRACGFRGEIFSFEPASETFGVLSEAARSDDRWHCH 85
Query 93 RCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVAADVL 152
ALG DG +++ SS+ + H +P G + VP+ L S+ ++
Sbjct 86 NAALGPEDGEARLHLT-RTSLGSSLFRRTELHSRVWPRDVEAGTELVPMRSLRSLWHELG 144
Query 153 RPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSL 212
+LK+DV+G E V+ G V DR ++LELS ++ G E ++ +
Sbjct 145 CDGRRVYLKLDVEGAELSVLE-GSGPVLDRIALLELELSLVDMHHGAPAFHEVINFLSGR 203
Query 213 GFTLSGLQPGFT-DPRNGRMLQADGIF 238
GF+ L+ D G+ML DGIF
Sbjct 204 GFSPVALEQNHNGDDTTGQMLMLDGIF 230
>gi|332525295|ref|ZP_08401464.1| methyltransferase FkbM family protein [Rubrivivax benzoatilyticus
JA2]
gi|332108573|gb|EGJ09797.1| methyltransferase FkbM family protein [Rubrivivax benzoatilyticus
JA2]
Length=239
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/213 (38%), Positives = 111/213 (53%), Gaps = 12/213 (5%)
Query 35 LQSHRVSAVLDVGANSGQYARGLR-GAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRR 93
L+ H+V VLDVGAN+GQY LR AG+ G +VSFEP P L A+ DP W+
Sbjct 35 LRHHQVDLVLDVGANAGQYHDFLRLEAGYEGEVVSFEPQPDLAERLNARAAADPRWKVHH 94
Query 94 CALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYV-GAQRVPIHRLDSVAADVL 152
ALG D +++NV + G SS L Q F N V VP+ RLD++ L
Sbjct 95 LALGSADAELALNVM-HRGEFSSFLQPDNTGQPQFADLNRVRQTVAVPVKRLDAIE---L 150
Query 153 RPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSL 212
+D FLK D QGF+ +VI G S + R +Q E+ QP+Y+G R+ L ++ L
Sbjct 151 PASDRLFLKADTQGFDLEVIRGA-SGILPRVKVIQTEVCVQPIYKGMPRYRDVLAELEGL 209
Query 213 GFTLSGLQPGFTDPRNGRM--LQADGIFFRGSD 243
GF+ +G F R+ M ++ D + R D
Sbjct 210 GFSPAGF---FAVSRSADMAAIEFDCLLVRRED 239
>gi|294011502|ref|YP_003544962.1| SAM-dependent methyltransferase [Sphingobium japonicum UT26S]
gi|292674832|dbj|BAI96350.1| SAM-dependent methyltransferase [Sphingobium japonicum UT26S]
Length=250
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/213 (39%), Positives = 108/213 (51%), Gaps = 13/213 (6%)
Query 33 RQLQSHRVSAVLDVGANSGQYARGLRG-AGFAGRIVSFEPLPGPFAVLQRSASTDPLWEC 91
R L + V V DVGAN GQYA LR AGF G I+SFEP P F+ L+R+AS+D W
Sbjct 34 RFLGAFAVDCVFDVGANRGQYATMLRSDAGFGGTILSFEPNPDIFSELERNASSDRRWHV 93
Query 92 RRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDA-FPPANYVG-AQRVPIHRLDSVAA 149
AL D DG S N+ + SS P QDA F N V + RL+S+
Sbjct 94 FNMALSDFDGMASFNIMAADQFSSLKAP--SGEQDAIFAERNRVTRTVDMQCRRLESLLP 151
Query 150 DVLRPNDIA--FLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALD 207
D+ R + A FLK+D QG + V G + D G+Q EL +P+YEGG R +D
Sbjct 152 DLRRAHGFARPFLKMDTQGHDLSVCEGAGDALRD-MAGVQTELGVRPIYEGGTGYRAMID 210
Query 208 LVDSLGFTLSGLQPGFTDPRNG--RMLQADGIF 238
+ GF S F + + +++ DGIF
Sbjct 211 WLAEHGFVPSAF---FANNKGHFPLLVEMDGIF 240
>gi|307133565|dbj|BAJ19055.1| putative methyltransferase [Streptomyces sp. SANK 62799]
Length=245
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/207 (33%), Positives = 103/207 (50%), Gaps = 3/207 (1%)
Query 33 RQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECR 92
R+L + V+D GAN GQYA+ +R GF G I SFEP F VL +A +D W C
Sbjct 26 RRLLLQDIDVVIDGGANGGQYAKWMRQCGFRGEIFSFEPASETFGVLAEAARSDDGWHCH 85
Query 93 RCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVAADVL 152
ALG DG + +++ SSV + H +P G + V + L S+ ++
Sbjct 86 NVALGPQDGEVMLHLT-RTSLGSSVFRRTELHSRVWPKDVAAGTELVSMRSLRSLWHELG 144
Query 153 RPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSL 212
+LK+DV+G E V+ G V DR +++ELS ++ RE ++ + +
Sbjct 145 CDGRRVYLKLDVEGAELSVLEGA-GPVLDRIALLEVELSLVAMHHDAPTFREVVNFLSAQ 203
Query 213 GFTLSGLQPGFT-DPRNGRMLQADGIF 238
GF+ L+ + D G+ML DGIF
Sbjct 204 GFSAVALEQNHSGDDTTGQMLMIDGIF 230
>gi|345137144|dbj|BAK66753.1| hypothetical protein SLG_20780 [Sphingobium sp. SYK-6]
Length=257
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/218 (36%), Positives = 114/218 (53%), Gaps = 12/218 (5%)
Query 32 LRQLQSHR-VSAVLDVGANSGQYARGLR-GAGFAGRIVSFEPLPGPFAVLQRSASTDPLW 89
LR+ +H + V+DVGAN+GQYA LR F+G I+SFEP P FA L+ +A DP W
Sbjct 35 LRRFITHFGIDCVIDVGANAGQYATMLRRDVRFSGTILSFEPNPTVFAALEDTARRDPRW 94
Query 90 ECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVG-AQRVPIHRLDSVA 148
AL D DG S N+ + SS P + F N V + RVP RL+++
Sbjct 95 HVHNIALSDRDGEASFNIMAADQFSSLNAPDAGL-EPIFAERNRVARSVRVPCARLETIL 153
Query 149 ADV--LRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREAL 206
D+ R LK+D QG + V+AG + V DR G+Q EL+ +PLYEG R +
Sbjct 154 PDLPGARDAQAILLKMDTQGHDAVVMAGA-AGVLDRMSGVQTELAVRPLYEGATDYRAMI 212
Query 207 DLVDSLGFTLSGLQPGFTDPRNG--RMLQADGIFFRGS 242
++ GF + + F + + +++ DG+F R +
Sbjct 213 AVLADAGFVPNAM---FANNKGHFPLLVELDGLFVRAA 247
>gi|94498710|ref|ZP_01305260.1| hypothetical protein SKA58_11615 [Sphingomonas sp. SKA58]
gi|94421809|gb|EAT06860.1| hypothetical protein SKA58_11615 [Sphingomonas sp. SKA58]
Length=248
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/213 (37%), Positives = 110/213 (52%), Gaps = 13/213 (6%)
Query 33 RQLQSHRVSAVLDVGANSGQYAR-GLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWEC 91
R L S V + DVGAN GQYA R AG+ G I+SFEP P FA+L++ A+ DP W
Sbjct 34 RFLTSFAVDCLFDVGANRGQYATMARRDAGYRGLILSFEPNPDIFALLEKRAAADPRWHV 93
Query 92 RRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDA-FPPANYVGAQ-RVPIHRLDSVAA 149
AL D DGT S N+ + SS P QDA F N V + RLD++
Sbjct 94 FNMALSDFDGTASFNIMAADQFSSLKKP--SSVQDAIFADRNTVTKTVEMQCRRLDTLLP 151
Query 150 DVLRPNDIA--FLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALD 207
++L + A FLK+D QG + V G + R +G+Q EL +P+Y+GG R +D
Sbjct 152 ELLAQHGFARPFLKMDTQGHDLSVCEGAGDQI-GRMLGVQTELGVRPIYDGGTGYRAMID 210
Query 208 LVDSLGFTLSGLQPGFTDPRNG--RMLQADGIF 238
+++ F S F + + +++ DGIF
Sbjct 211 WLEARDFMPSAF---FANNKGHFPLLVEMDGIF 240
>gi|26546923|gb|AAN05766.1| unknown [Mycobacterium avium]
Length=100
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/96 (49%), Positives = 64/96 (67%), Gaps = 0/96 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M + R I R E RY +E W+R+F++QL +H+V+ V DVGAN+GQY GLR A
Sbjct 1 MHFLEQVRMIARNIPTEALRYLSERHWKRHFVKQLAAHQVNVVFDVGANTGQYTAGLRKA 60
Query 61 GFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCAL 96
G+ GRI+SFEPL PF+ L+ A+ D LW+C R A+
Sbjct 61 GYKGRIISFEPLSQPFSRLENRAAKDALWDCSRYAI 96
>gi|334344866|ref|YP_004553418.1| FkbM family methyltransferase [Sphingobium chlorophenolicum L-1]
gi|334101488|gb|AEG48912.1| methyltransferase FkbM family [Sphingobium chlorophenolicum L-1]
Length=250
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/213 (38%), Positives = 108/213 (51%), Gaps = 13/213 (6%)
Query 33 RQLQSHRVSAVLDVGANSGQYARGLRG-AGFAGRIVSFEPLPGPFAVLQRSASTDPLWEC 91
R L + V V DVGAN GQYA LR AGF G I+SFEP P FA L+R A++D W
Sbjct 34 RFLSAFAVDCVFDVGANRGQYATMLRKDAGFRGTILSFEPNPQVFAELERRAASDGKWHA 93
Query 92 RRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDA-FPPANYVGAQ-RVPIHRLDSVAA 149
AL D DGT S N+ + SS P QDA F N V + RL+++
Sbjct 94 FNMALSDFDGTASFNIMAADQFSSLKKP--SGEQDAIFADRNKVTHTVDMQCRRLENLLP 151
Query 150 DVLRPNDIA--FLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALD 207
++ +D A FLK+D QG + V G + + + G+Q EL +P+YEGG R +D
Sbjct 152 ELKAAHDFARPFLKMDTQGHDLSVCEGAGAVLSE-MAGVQTELGVRPIYEGGTGYRVMID 210
Query 208 LVDSLGFTLSGLQPGFTDPRNG--RMLQADGIF 238
+ F S F + + +++ DGIF
Sbjct 211 WLADHAFVPSAF---FANNKGHFPLLVEMDGIF 240
>gi|209967250|ref|YP_002300165.1| methyltransferase, FkbM family, putative [Rhodospirillum centenum
SW]
gi|209960716|gb|ACJ01353.1| methyltransferase, FkbM family, putative [Rhodospirillum centenum
SW]
Length=264
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/205 (39%), Positives = 110/205 (54%), Gaps = 16/205 (7%)
Query 40 VSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDV 99
V ++DVGAN GQ++ +R A RIV+FEPL P A R + P + R ALG
Sbjct 47 VGMLIDVGANVGQFSLLVRTLHPAARIVAFEPLAEPAARYGRLFADAPGVDLHRHALGSA 106
Query 100 DGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIA- 158
+G +I+++ SSS+LP+ + F VG + VP+ RLD+ VL P +
Sbjct 107 EGNATIHLS-RRLDSSSLLPISPVQEQTFAGTGEVGVRTVPVRRLDA----VLSPASLTG 161
Query 159 --FLKIDVQGFEKQVIAG---GDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSLG 213
LK+DVQGFE +VI G G + V + E+SF PLYEG L + + + G
Sbjct 162 QVLLKLDVQGFELEVIRGFSVGLAAVEH----VYAEVSFLPLYEGQPLAPAIIADLHARG 217
Query 214 FTLSGLQPGFTDPRNGRMLQADGIF 238
F L+G+ TD R GR +QAD +F
Sbjct 218 FDLAGVYNLSTD-REGRSVQADMLF 241
>gi|77165008|ref|YP_343533.1| methyltransferase FkbM [Nitrosococcus oceani ATCC 19707]
gi|254434095|ref|ZP_05047603.1| methyltransferase, FkbM family protein [Nitrosococcus oceani
AFC27]
gi|76883322|gb|ABA58003.1| Methyltransferase FkbM [Nitrosococcus oceani ATCC 19707]
gi|207090428|gb|EDZ67699.1| methyltransferase, FkbM family protein [Nitrosococcus oceani
AFC27]
Length=237
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/211 (36%), Positives = 110/211 (53%), Gaps = 7/211 (3%)
Query 32 LRQLQS-HRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWE 90
+R L+S + V+D+GAN GQ+A R RIVSFEPLPGP +R + D
Sbjct 23 VRALKSLGEMGTVVDIGANRGQFALAARHCFPGARIVSFEPLPGPAEKFRRVLAGDSRLV 82
Query 91 CRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDS-VAA 149
+ A+G G +I+++ + SSS+LP+ + FP VG V + L + A
Sbjct 83 LHQVAIGPARGEETIHISAADD-SSSLLPITGMQRSLFPGTGEVGTAVVQVAPLSEFLPA 141
Query 150 DVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLV 209
+ + P A LK+DVQG+E + + G ++ + R + E SF LYEG L E + +
Sbjct 142 EEIEPP--ALLKLDVQGYELEALKGCEALL-SRFSTVYAECSFAELYEGQALTDEVIAWL 198
Query 210 DSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
GF LSG+ D + GR +QAD +F R
Sbjct 199 RDRGFRLSGVYHMSYDGK-GRAIQADFLFTR 228
>gi|170077759|ref|YP_001734397.1| methyltransferase, FkbM family protein [Synechococcus sp. PCC
7002]
gi|169885428|gb|ACA99141.1| methyltransferase, FkbM family protein [Synechococcus sp. PCC
7002]
Length=247
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/189 (33%), Positives = 99/189 (53%), Gaps = 3/189 (1%)
Query 35 LQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRC 94
L+ + V+ +LDVGAN GQ+A LR G+ G I+SFEPL + +L ++AS D W
Sbjct 35 LKEYEVNLILDVGANEGQFASVLRDIGYVGTIISFEPLSKEYRLLSQAASKDSNWYTYNL 94
Query 95 ALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRP 154
ALG + ++V+ SS +L Q + + V + RLD+ +V++
Sbjct 95 ALGKQNKEQILHVSDKSTFSSFLLSNSLCEQRFGKESIGDKNEVVSVRRLDNFLVEVVKN 154
Query 155 NDIA--FLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSL 212
D +LK+D QG++ +V +G T+ V +Q E+S P+Y + ++ L
Sbjct 155 IDKMRIYLKMDTQGYDLEVFSGA-GTLLKNIVALQSEVSVVPIYHSMPDMLYSISLFQEA 213
Query 213 GFTLSGLQP 221
GF+LSG+ P
Sbjct 214 GFSLSGMYP 222
>gi|319760824|ref|YP_004124761.1| methyltransferase fkbm family [Alicycliphilus denitrificans BC]
gi|330822731|ref|YP_004386034.1| methyltransferase FkbM family [Alicycliphilus denitrificans K601]
gi|317115385|gb|ADU97873.1| methyltransferase FkbM family [Alicycliphilus denitrificans BC]
gi|329308103|gb|AEB82518.1| methyltransferase FkbM family [Alicycliphilus denitrificans K601]
Length=236
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/217 (34%), Positives = 107/217 (50%), Gaps = 12/217 (5%)
Query 8 RNILRRNGIEVSR--YFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGR 65
+ + R G++V Y + ++R L+ H + AV+D+GAN G Y LR GFAG
Sbjct 6 KALAHRAGLDVMSLAYSRDYIYDRFLPGALKGHGIQAVIDIGANIGGYGELLRRVGFAGD 65
Query 66 IVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISIN-VAGNEGASSSVLPMLKRH 124
I SFEP PF L R A+ DP W + A D GT I+ + G+E S L R
Sbjct 66 IHSFEPCSQPFGELARKAAGDPRWHVYQKAASDRSGTAQIHTMVGSELNSFLSLRESSRK 125
Query 125 QDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCV 184
G + V LD + D+ F+KID QG + +V++GG + + +
Sbjct 126 M------TETGTEDVETVTLDGL--DLPIDWSRTFVKIDTQGHDVKVMSGGRNVLRQAAL 177
Query 185 GMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQP 221
+Q E+SF P+Y+G EA+ + LGF + G+ P
Sbjct 178 -IQSEVSFLPIYQGMPAFDEAIASLKELGFDVIGMFP 213
>gi|257092580|ref|YP_003166221.1| FkbM family methyltransferase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257045104|gb|ACV34292.1| methyltransferase FkbM family [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length=241
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/192 (35%), Positives = 95/192 (50%), Gaps = 11/192 (5%)
Query 35 LQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRC 94
+ H + V+DVGAN GQ+A LR GF G I SFEP+ + L+R A D WE
Sbjct 32 IHRHAIDVVIDVGANDGQFALLLRSEGFRGTIYSFEPVNSTYEQLRRIAQHDANWEVFNT 91
Query 95 ALGDVDGTISINVAGNEGASSSVLPMLKRH---QDAFPPANYVGAQRVPIHRLDS-VAAD 150
ALG+ G INV ASS + +L + + AFP + + + LD+ +A +
Sbjct 92 ALGERVGDAIINVT----ASSDLCSLLDPNDFGKTAFPSIAVSHQETIAMDTLDNFIARE 147
Query 151 VLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQL-ELSFQPLYEGGMLIREALDLV 209
L LK+D QG++ QV G ++ C+ L E+S P+Y +AL L
Sbjct 148 KLAKAARILLKMDTQGYDLQVFQGAQQSLG--CIVCLLSEISLMPIYAQAPHYLDALRLY 205
Query 210 DSLGFTLSGLQP 221
+ GF SGL P
Sbjct 206 EGKGFVPSGLYP 217
>gi|289763134|ref|ZP_06522512.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289710640|gb|EFD74656.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=78
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/78 (57%), Positives = 54/78 (70%), Gaps = 0/78 (0%)
Query 1 MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGA 60
M+ + AR I R EVSR ++E D + F++QL+S RV V DVGANSGQYA GLR A
Sbjct 1 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGANSGQYAAGLRRA 60
Query 61 GFAGRIVSFEPLPGPFAV 78
+ GRIVSFEPL GPF +
Sbjct 61 AYKGRIVSFEPLSGPFTI 78
>gi|206601978|gb|EDZ38460.1| Methyltransferase, FkbM family [Leptospirillum sp. Group II '5-way
CG']
Length=262
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 101/200 (51%), Gaps = 16/200 (8%)
Query 29 RNFLRQLQSHRVSAVLDVGANSGQYARGLRG-AGFAGRIVSFEPLPGPFAVLQRSASTDP 87
R+ L Q+ R VLDVGAN GQYAR LR + G I SFEP+ + +L + DP
Sbjct 36 RDLLTQI---RCDCVLDVGANKGQYARFLRTHVRYGGPIFSFEPVRALYEILLDQSQKDP 92
Query 88 LWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANY-VGAQRVPIHRLDS 146
LW+ ALG G ++++ E +S LP L N V ++ V + +D
Sbjct 93 LWKVFPFALGAKTGEKNLHIMAGE-TMNSFLPPLSTGIAFLDEINIPVRSEAVSVRTVD- 150
Query 147 VAADVLRPNDIA-----FLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGML 201
D L+ +++ FLK+D QGF+ +V+ G ++ R +Q E+S P+YE
Sbjct 151 ---DFLKTKEMSGFSSIFLKMDTQGFDGEVLKGASCSL-PRIAALQSEVSCIPIYENMTD 206
Query 202 IREALDLVDSLGFTLSGLQP 221
+L D GF+++G+ P
Sbjct 207 WLTSLKHFDQQGFSVTGMFP 226
>gi|220935263|ref|YP_002514162.1| methyltransferase FkbM [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219996573|gb|ACL73175.1| methyltransferase FkbM [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length=242
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/214 (36%), Positives = 110/214 (52%), Gaps = 16/214 (7%)
Query 30 NFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLW 89
LRQL + R V+D+GAN GQ+A R A +I SFEPL P + + + ++D
Sbjct 37 TVLRQLGACRT--VVDIGANRGQFALAARAAFADAQIYSFEPLSAPASGYRATLASDVRV 94
Query 90 ECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVAA 149
A+G G I+++ + SSS+LP+ R + FP +G R+ + RL A
Sbjct 95 CLLEAAVGPEKGEADIHLSERDD-SSSLLPITGRQDELFPGTAEIGRGRISVVRL----A 149
Query 150 DVLRPNDI---AFLKIDVQGFEKQVIAGGDST--VHDRCVGMQLELSFQPLYEGGMLIRE 204
DVL +I + LK+DVQGFE Q +AG + + D + +E SF LY G E
Sbjct 150 DVLSAEEIVAPSLLKLDVQGFELQALAGSEDLLPLFD---WVYVECSFVELYAGQAFADE 206
Query 205 ALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIF 238
+ + GF L+G+ D R GR +QAD +F
Sbjct 207 VIAWLRERGFRLTGVFNMSYD-RAGRAIQADFLF 239
>gi|85374467|ref|YP_458529.1| methyltransferase, FkbM family protein [Erythrobacter litoralis
HTCC2594]
gi|84787550|gb|ABC63732.1| methyltransferase, FkbM family protein [Erythrobacter litoralis
HTCC2594]
Length=242
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/202 (36%), Positives = 96/202 (48%), Gaps = 8/202 (3%)
Query 43 VLDVGANSGQYA-RGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDG 101
VLD+GA G+ A R L GA R+ FEP P FA L+R A+ P ALGD +
Sbjct 42 VLDIGACGGELAERELLGAFPQARLHCFEPHPASFARLERVAARHPRIHAHHIALGDSEM 101
Query 102 TISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVA---ADVLRPNDIA 158
+ + +SSS+ + FP V RLD A D L +
Sbjct 102 MVDMQFNPGSPSSSSLRMQTAENVTLFPQVADTITTPVSQRRLDDWAREQGDALEGPLV- 160
Query 159 FLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSG 218
+K+DVQGFE +VIAGG T+ R G+ LE+ PLYEG D + SLGF +G
Sbjct 161 -VKMDVQGFEDRVIAGGQETLR-RADGIVLEVCLAPLYEGQPTFAALHDSLASLGFAFAG 218
Query 219 LQPGFTDPRNGRMLQADGIFFR 240
+ F G+++ D +F R
Sbjct 219 TRDQFFG-EGGKVIYLDAVFLR 239
>gi|189218559|ref|YP_001939200.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum
V4]
gi|189185417|gb|ACD82602.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum
V4]
Length=238
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/241 (31%), Positives = 116/241 (49%), Gaps = 14/241 (5%)
Query 2 RLARRARNILRRNGIE--VSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRG 59
+L + +N++ +N + FA + E LR L V+D+GAN GQ++ R
Sbjct 6 KLTKFYKNVINKNSWKGLCCGVFAGTEHE-PVLRDLNC---LTVIDIGANRGQFSLAARH 61
Query 60 AGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLP 119
I +FEPLP P A+ ++ DPL + + +G +I+++ + SSS LP
Sbjct 62 LFPKAAIYAFEPLPVPAAIFKKVFKDDPLVQLIQSGIGKTRELRTIHISYKDD-SSSFLP 120
Query 120 MLKRHQDAFPPANYVGAQRVPIHRLD--SVAADVLRPNDIAFLKIDVQGFEKQVIAGGDS 177
+ + FP + ++ V I L A + +P A LKIDVQGFE +V+ G +
Sbjct 121 IGENQLRLFPGTGHKESKEVEIGPLSLWITAESIKKP---ALLKIDVQGFELEVLKGSEE 177
Query 178 TVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGI 237
+ D + +E SF LY G L E + + S F L G+ F D R G+ +Q D
Sbjct 178 LL-DLFDYIYVESSFCELYHGQALADEIIAFLFSRQFRLKGIYNLFYDKR-GKPVQGDFF 235
Query 238 F 238
F
Sbjct 236 F 236
>gi|220935273|ref|YP_002514172.1| hypothetical protein Tgr7_2105 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219996583|gb|ACL73185.1| conserved hypothetical protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length=235
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/237 (33%), Positives = 109/237 (46%), Gaps = 11/237 (4%)
Query 8 RNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIV 67
R I+ R G +V R + L L + +V+DVGAN GQ+AR + +
Sbjct 6 RGIVNRLGFDVIRLHRS---PKRTLLGLSRMNIGSVIDVGANRGQFARLVSTFFPNAELY 62
Query 68 SFEPLPGPFAVLQRSASTD-PLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQD 126
FEPL PF L A T C + ALG+ +G I++ SSS+L
Sbjct 63 CFEPLEEPFRELNAWAETQGDRVHCFQFALGEQEGEAEIHLHEQHTPSSSLLSATDNCHR 122
Query 127 AFPPANYVGAQRVPIHRLDSVAADVL--RPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCV 184
+P +R+ I LD V L P +I LK+DVQGFE +V+ GG V +C
Sbjct 123 LYPQTRVERMERIRISTLDEVLKGSLDRMPREI-LLKLDVQGFEDRVLRGG-GNVLSQCR 180
Query 185 GMQLELSFQPLYEGGMLIREALDLVDSLGFTLSG-LQPGFTDPRNGRMLQADGIFFR 240
+ LE+ PLY+G E L+ GF +G L + +GR++ D +F R
Sbjct 181 AVLLEVCVDPLYQGQASFYELAHLLREQGFGYAGNLDQSYGA--DGRVVFLDAMFVR 235
>gi|124515961|gb|EAY57470.1| Methyltransferase, FkbM family [Leptospirillum rubarum]
Length=262
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/187 (34%), Positives = 95/187 (51%), Gaps = 13/187 (6%)
Query 42 AVLDVGANSGQYARGLRG-AGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVD 100
VLD+GAN GQYAR LR G+ G I SFEP+ + +L + DPLW+ ALG
Sbjct 46 CVLDIGANKGQYARFLRKHVGYEGPIFSFEPVRPLYEILLDHSKKDPLWKVFPFALGAKA 105
Query 101 GTISINVAGNEGASSSVLPMLKRHQDAFPPANY-VGAQRVPIHRLDSVAADVLRPNDIA- 158
G +++ E +S LP L N V ++ V + +D DVL +++
Sbjct 106 GKEMLHITAGE-TMNSFLPPLSSGIAFLDEINVPVRSEAVSVRTVD----DVLEAQEMSG 160
Query 159 ----FLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSLGF 214
FLK+D QGF+ +V+ G ++ R +Q E+S P+YE +L D GF
Sbjct 161 FSSIFLKMDTQGFDGEVLKGASGSL-PRIAALQSEVSCIPIYENMTDWLTSLKNFDEQGF 219
Query 215 TLSGLQP 221
+++G+ P
Sbjct 220 SVTGMFP 226
>gi|108797916|ref|YP_638113.1| methyltransferase FkbM [Mycobacterium sp. MCS]
gi|108768335|gb|ABG07057.1| Methyltransferase FkbM [Mycobacterium sp. MCS]
Length=287
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/228 (34%), Positives = 108/228 (48%), Gaps = 25/228 (10%)
Query 30 NFLRQLQSHRVSA---------------VLDVGANSGQYARGLRGAGFAGRIVSFEPLPG 74
+FLR L HRV+A ++D GAN GQ++ R RI++FEPLP
Sbjct 48 HFLRALIQHRVAAASEHLDAIRFCSANTLIDAGANKGQFSLAFRKVRPRARIIAFEPLPD 107
Query 75 PFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAF--PPAN 132
+R + D L R ALG GT +VA E +SS + P + + AF PA+
Sbjct 108 AADTYERVFAGDRLTNLVRVALGSAGGTAHFHVADREDSSSLLQPG-RGQERAFGVRPAS 166
Query 133 YVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSF 192
+ V + RLD DV FLK+DVQG E V G T + + +ELSF
Sbjct 167 RIN---VSVKRLDE-CVDVESLARPIFLKVDVQGGEIGVFDG--CTSLSQVDFIYVELSF 220
Query 193 QPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFR 240
LY+ L +E D + + GFT++G+ T + G Q D +F R
Sbjct 221 VELYDNQPLFQEVYDYLVNRGFTVAGMYNQVTTAQFGPT-QVDVLFKR 267
>gi|256421318|ref|YP_003121971.1| methyltransferase FkbM family [Chitinophaga pinensis DSM 2588]
gi|256036226|gb|ACU59770.1| methyltransferase FkbM family [Chitinophaga pinensis DSM 2588]
Length=245
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/207 (32%), Positives = 98/207 (48%), Gaps = 14/207 (6%)
Query 39 RVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGD 98
V+ +LDVGAN GQ+A + I SFEP+P ++ LQ++ P ALG
Sbjct 46 EVNTILDVGANRGQFALSAKHFYPGAGIHSFEPIPEVYSTLQQNTRHIPRIHTYNFALGS 105
Query 99 VDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIA 158
+G + A + +SS L + Q P +VP+ +D + L
Sbjct 106 TNGVLEF-YANHYSHASSALHVSSLQQQLLPQTAEADQIKVPVKCMDDLLP-TLPVKAPV 163
Query 159 FLKIDVQGFEKQVIAGGDSTVHDRCVG----MQLELSFQPLYEGGMLIREALDLVDSLGF 214
LK+DVQGFEK+V+ G VH C+G + E SF +Y+G L E + V LGF
Sbjct 164 LLKLDVQGFEKEVLKGA---VH--CLGQIDYLLFETSFVQMYDGEPLFDEMHNYVKELGF 218
Query 215 TLSGLQP-GFTDPRNGRMLQADGIFFR 240
+ P GF + ++LQ D ++ R
Sbjct 219 EF--IAPVGFLQTDDLQILQMDLLYKR 243
Lambda K H
0.323 0.140 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 336904708980
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40