BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1517
Length=254
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608655|ref|NP_216033.1| hypothetical protein Rv1517 [Mycoba... 481 5e-134
gi|15840983|ref|NP_336020.1| hypothetical protein MT1567 [Mycoba... 479 2e-133
gi|289753603|ref|ZP_06512981.1| conserved hypothetical protein [... 477 9e-133
gi|339294492|gb|AEJ46603.1| hypothetical protein CCDC5079_1413 [... 471 4e-131
gi|308373171|ref|ZP_07431269.2| conserved membrane protein [Myco... 466 1e-129
gi|240167921|ref|ZP_04746580.1| hypothetical protein MkanA1_0130... 147 2e-33
gi|183982365|ref|YP_001850656.1| hypothetical protein MMAR_2352 ... 135 8e-30
gi|118617179|ref|YP_905511.1| hypothetical protein MUL_1527 [Myc... 132 4e-29
gi|336460210|gb|EGO39114.1| Protein of unknown function (DUF2910... 126 2e-27
gi|41409859|ref|NP_962695.1| hypothetical protein MAP3761c [Myco... 126 3e-27
gi|183983638|ref|YP_001851929.1| hypothetical protein MMAR_3658 ... 122 5e-26
gi|254233310|ref|ZP_04926636.1| hypothetical protein TBCG_03747 ... 120 2e-25
gi|289445422|ref|ZP_06435166.1| conserved membrane protein [Myco... 120 2e-25
gi|15610957|ref|NP_218338.1| integral membrane protein [Mycobact... 120 3e-25
gi|31794995|ref|NP_857488.1| integral membrane protein [Mycobact... 119 3e-25
gi|340628790|ref|YP_004747242.1| putative integral membrane prot... 116 3e-24
gi|118470947|ref|YP_888992.1| hypothetical protein MSMEG_4733 [M... 112 4e-23
gi|15827631|ref|NP_301894.1| hypothetical protein ML1233 [Mycoba... 112 4e-23
gi|146760141|emb|CAJ77662.1| gap like protein [Mycobacterium che... 112 6e-23
gi|169628031|ref|YP_001701680.1| hypothetical protein MAB_0934 [... 110 2e-22
gi|118470074|ref|YP_884826.1| hypothetical protein MSMEG_0413 [M... 105 8e-21
gi|85541019|gb|ABC70856.1| Gap-like [Mycobacterium smegmatis str... 104 1e-20
gi|342857526|ref|ZP_08714182.1| hypothetical protein MCOL_01580 ... 104 1e-20
gi|342860078|ref|ZP_08716730.1| putative integral membrane prote... 102 6e-20
gi|240173293|ref|ZP_04751951.1| hypothetical protein MkanA1_2853... 102 6e-20
gi|120401303|ref|YP_951132.1| hypothetical protein Mvan_0277 [My... 99.0 6e-19
gi|41407516|ref|NP_960352.1| hypothetical protein MAP1418c [Myco... 98.6 7e-19
gi|118462330|ref|YP_882244.1| hypothetical protein MAV_3059 [Myc... 97.1 2e-18
gi|296166953|ref|ZP_06849369.1| GAP family peptidoglyclipid addr... 97.1 2e-18
gi|145221004|ref|YP_001131682.1| hypothetical protein Mflv_0400 ... 94.0 2e-17
gi|169631771|ref|YP_001705420.1| hypothetical protein MAB_4698 [... 93.6 3e-17
gi|108797229|ref|YP_637426.1| hypothetical protein Mmcs_0249 [My... 93.2 3e-17
gi|169631175|ref|YP_001704824.1| hypothetical protein MAB_4097c ... 91.7 1e-16
gi|169630228|ref|YP_001703877.1| hypothetical protein MAB_3146c ... 91.3 1e-16
gi|118468883|ref|YP_884816.1| integral membrane protein [Mycobac... 90.9 2e-16
gi|254775512|ref|ZP_05217028.1| hypothetical protein MaviaA2_127... 90.5 2e-16
gi|146760135|emb|CAJ77697.1| gap protein [Mycobacterium chelonae] 89.0 7e-16
gi|254818761|ref|ZP_05223762.1| hypothetical protein MintA_02494... 86.3 4e-15
gi|342860689|ref|ZP_08717339.1| hypothetical protein MCOL_17498 ... 84.0 2e-14
gi|41408334|ref|NP_961170.1| hypothetical protein MAP2236 [Mycob... 82.4 6e-14
gi|254774574|ref|ZP_05216090.1| hypothetical protein MaviaA2_078... 82.0 8e-14
gi|169631770|ref|YP_001705419.1| hypothetical protein MAB_4697 [... 76.3 4e-12
gi|126435681|ref|YP_001071372.1| hypothetical protein Mjls_3102 ... 67.0 2e-09
gi|118469152|ref|YP_887333.1| hypothetical protein MSMEG_3015 [M... 57.4 2e-06
gi|169627859|ref|YP_001701508.1| hypothetical protein MAB_0758 [... 44.3 0.019
gi|240170027|ref|ZP_04748686.1| hypothetical protein MkanA1_1199... 42.7 0.055
gi|342859195|ref|ZP_08715849.1| hypothetical protein MCOL_09963 ... 41.6 0.13
gi|108797453|ref|YP_637650.1| hypothetical protein Mmcs_0473 [My... 40.4 0.28
gi|312198286|ref|YP_004018347.1| hypothetical protein FraEuI1c_4... 40.0 0.30
gi|145220856|ref|YP_001131534.1| hypothetical protein Mflv_0252 ... 39.3 0.55
>gi|15608655|ref|NP_216033.1| hypothetical protein Rv1517 [Mycobacterium tuberculosis H37Rv]
gi|148661313|ref|YP_001282836.1| hypothetical protein MRA_1529 [Mycobacterium tuberculosis H37Ra]
gi|148822742|ref|YP_001287496.1| hypothetical protein TBFG_11551 [Mycobacterium tuberculosis F11]
36 more sequence titles
Length=254
Score = 481 bits (1238), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 254/254 (100%), Positives = 254/254 (100%), Gaps = 0/254 (0%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV
Sbjct 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA
Sbjct 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS
Sbjct 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI
Sbjct 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
Query 241 GVGFLFLYQGVTSL 254
GVGFLFLYQGVTSL
Sbjct 241 GVGFLFLYQGVTSL 254
>gi|15840983|ref|NP_336020.1| hypothetical protein MT1567 [Mycobacterium tuberculosis CDC1551]
gi|31792703|ref|NP_855196.1| hypothetical protein Mb1544 [Mycobacterium bovis AF2122/97]
gi|121637438|ref|YP_977661.1| hypothetical protein BCG_1569 [Mycobacterium bovis BCG str. Pasteur
1173P2]
33 more sequence titles
Length=254
Score = 479 bits (1233), Expect = 2e-133, Method: Compositional matrix adjust.
Identities = 253/254 (99%), Positives = 253/254 (99%), Gaps = 0/254 (0%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV
Sbjct 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA
Sbjct 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS
Sbjct 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
GAEIGTQ GAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI
Sbjct 181 GAEIGTQFGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
Query 241 GVGFLFLYQGVTSL 254
GVGFLFLYQGVTSL
Sbjct 241 GVGFLFLYQGVTSL 254
>gi|289753603|ref|ZP_06512981.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289694190|gb|EFD61619.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=254
Score = 477 bits (1227), Expect = 9e-133, Method: Compositional matrix adjust.
Identities = 252/254 (99%), Positives = 253/254 (99%), Gaps = 0/254 (0%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV
Sbjct 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
ALAAIQGVVSAA+EFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA
Sbjct 61 ALAAIQGVVSAADEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS
Sbjct 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
GAEIGTQ GAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI
Sbjct 181 GAEIGTQFGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
Query 241 GVGFLFLYQGVTSL 254
GVGFLFLYQGVTSL
Sbjct 241 GVGFLFLYQGVTSL 254
>gi|339294492|gb|AEJ46603.1| hypothetical protein CCDC5079_1413 [Mycobacterium tuberculosis
CCDC5079]
gi|339298129|gb|AEJ50239.1| hypothetical protein CCDC5180_1402 [Mycobacterium tuberculosis
CCDC5180]
Length=251
Score = 471 bits (1212), Expect = 4e-131, Method: Compositional matrix adjust.
Identities = 250/251 (99%), Positives = 250/251 (99%), Gaps = 0/251 (0%)
Query 4 MVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALA 63
MVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALA
Sbjct 1 MVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALA 60
Query 64 AIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADGG 123
AIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADGG
Sbjct 61 AIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADGG 120
Query 124 MSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAE 183
MSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAE
Sbjct 121 MSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAE 180
Query 184 IGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVG 243
IGTQ GAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVG
Sbjct 181 IGTQFGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVG 240
Query 244 FLFLYQGVTSL 254
FLFLYQGVTSL
Sbjct 241 FLFLYQGVTSL 251
>gi|308373171|ref|ZP_07431269.2| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|308375600|ref|ZP_07444475.2| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308338640|gb|EFP27491.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|308345837|gb|EFP34688.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
Length=247
Score = 466 bits (1199), Expect = 1e-129, Method: Compositional matrix adjust.
Identities = 246/247 (99%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 8 LGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALAAIQG 67
+GLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALAAIQG
Sbjct 1 MGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALAAIQG 60
Query 68 VVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADGGMSAL 127
VVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADGGMSAL
Sbjct 61 VVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADGGMSAL 120
Query 128 ALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAEIGTQ 187
ALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAEIGTQ
Sbjct 121 ALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAEIGTQ 180
Query 188 LGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVGFLFL 247
LGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVGFLFL
Sbjct 181 LGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVGFLFL 240
Query 248 YQGVTSL 254
YQGVTSL
Sbjct 241 YQGVTSL 247
>gi|240167921|ref|ZP_04746580.1| hypothetical protein MkanA1_01305 [Mycobacterium kansasii ATCC
12478]
Length=240
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/235 (43%), Positives = 137/235 (59%), Gaps = 14/235 (5%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MWT VL+L L A +P RLG+A+ ++S+ RPM+NL AFW GGM G +AL VL+ +RD
Sbjct 1 MWTTVLILALITATEPVRLGVALFLISKPRPMVNLLAFWFGGMATGAAVALGVLLLLRDF 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
A A V S A VG HI + + ++ L + GV V +
Sbjct 61 AHALADNVTSLAAS--STVG-------HIQVVLGVVALVVAALI----AAGVSVRSPALV 107
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPP-FESVVALTVIMA 179
G S+ L Q P +RL Q L+G W AFV G++S+ PP E +VALT I A
Sbjct 108 STGESSAVLVQEQPSRFSRLMANAQGALEGGFPWVAFVAGLSSAGPPPVEYLVALTAIGA 167
Query 180 SGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQI 234
SGA GTQL A V + L++LA++EIPLV++L P +T+ MLR ++W+R++RRQI
Sbjct 168 SGAAFGTQLSATVAYLLVMLAIVEIPLVSHLVNPDKTEATMLRLRNWLRTHRRQI 222
>gi|183982365|ref|YP_001850656.1| hypothetical protein MMAR_2352 [Mycobacterium marinum M]
gi|183175691|gb|ACC40801.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=244
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/237 (43%), Positives = 141/237 (60%), Gaps = 16/237 (6%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MWT VL+L + A +P RLG+A+ ++S+ RPM+NL AFW GGM G+G+ALAVL+ + D+
Sbjct 1 MWTTVLILAVMTATEPVRLGVAIFLVSKPRPMVNLLAFWFGGMATGIGVALAVLLLLGDL 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPV-GPVGV 119
A A + V S A VG L + L ++ A G V P V
Sbjct 61 ANAIVDNVSSLAAT--SVVGHLQ-----------VGLGVVALLVAALVATGFSVRSPALV 107
Query 120 ADG-GMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSA-PPFESVVALTVI 177
A G G S+ + P +RL Q L+G W AFVVG++S+ PP E +VALT I
Sbjct 108 ASGAGDSSTLMVAETPTRFSRLMASAQGALEGGFPWAAFVVGLSSAGPPPVEYLVALTAI 167
Query 178 MASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQI 234
ASGA +GTQL A V+ L++LA+IEIPL++YL P +T+ ML ++W+R++RRQI
Sbjct 168 GASGAAMGTQLSATFVYLLVMLAIIEIPLISYLVHPGRTEATMLWLRNWLRAHRRQI 224
>gi|118617179|ref|YP_905511.1| hypothetical protein MUL_1527 [Mycobacterium ulcerans Agy99]
gi|118569289|gb|ABL04040.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans
Agy99]
Length=244
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/237 (43%), Positives = 139/237 (59%), Gaps = 16/237 (6%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MWT VL+L + A +P RLG+A+ ++S+ RPM+NL AFW GGM G+G+ALAVL+ + D+
Sbjct 1 MWTTVLILAVMTATEPVRLGVAIFLVSKPRPMVNLLAFWFGGMATGIGVALAVLLLLGDL 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPV-GPVGV 119
A A + V S A VG L + L ++ A G V P V
Sbjct 61 ANAIVDNVSSLAAT--SVVGHLQ-----------VGLGVVALLVAALVATGFSVRSPALV 107
Query 120 ADG-GMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSA-PPFESVVALTVI 177
A G G S+ + P +RL Q L+G W AFVVG++S+ PP E +VALT I
Sbjct 108 ASGAGDSSTLMVAETPTRFSRLMASAQGALEGGFPWAAFVVGLSSAGPPPVEYLVALTAI 167
Query 178 MASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQI 234
SGA +GTQL A V+ L++LA+IEIPL+ YL P +T+ ML ++W+R++RRQI
Sbjct 168 GVSGAAMGTQLSATFVYLLVMLAIIEIPLIGYLVHPGRTEATMLWLRNWLRAHRRQI 224
>gi|336460210|gb|EGO39114.1| Protein of unknown function (DUF2910) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=242
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/234 (39%), Positives = 126/234 (54%), Gaps = 19/234 (8%)
Query 5 VLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALAA 64
V+ + L A +P RLG+A++++SR RP+LNL AFW+G M + + VL + A
Sbjct 4 VIAMALIAATNPVRLGIALLLISRSRPVLNLLAFWLGAMATAITAGVGVLTVVHSFAPTL 63
Query 65 IQGV--VSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADG 122
+Q V +SA + R I IG+++L + A +VA V V P V
Sbjct 64 MQSVSALSATPDARHT---------QIAIGLVILAITA-LVA-----VSSSVRPTRVTSA 108
Query 123 GMSALALAQRP--PGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
+ A RP P +ARL R + +L D + AFV+G+ S P E +AL I AS
Sbjct 109 SVDRRAGLPRPNTPSTLARLRGRIRDVLTSDGLSVAFVLGLGSGFPAVEYPIALAAIAAS 168
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQI 234
G +G Q A V+FT+++L VIEIPLV+Y A P QTQ VM R DWV R Q+
Sbjct 169 GNSVGVQFSAAVMFTVVMLLVIEIPLVSYSASPAQTQAVMQRIHDWVLPRRWQL 222
>gi|41409859|ref|NP_962695.1| hypothetical protein MAP3761c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398691|gb|AAS06311.1| hypothetical protein MAP_3761c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=242
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/234 (39%), Positives = 126/234 (54%), Gaps = 19/234 (8%)
Query 5 VLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALAA 64
V+ + L A +P RLG+A++++SR RP+LNL AFW+G M + + VL + A
Sbjct 4 VIAMALIAATNPVRLGIALLLISRSRPVLNLLAFWLGAMATAITAGVGVLTVVHSFAPTL 63
Query 65 IQGV--VSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADG 122
+Q V +SA + R I IG+++L + A +VA V V P V
Sbjct 64 MQSVSALSATPDARHT---------QIAIGLVILAITA-LVA-----VSSSVRPTRVTSA 108
Query 123 GMSALALAQRP--PGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
+ A RP P +ARL R + +L D + AF++G+ S P E +AL I AS
Sbjct 109 SVDRRAGLPRPNTPSTLARLRGRIRDVLTSDGLSVAFILGLGSGFPAVEYPIALAAIAAS 168
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQI 234
G +G Q A V+FT+++L VIEIPLV+Y A P QTQ VM R DWV R Q+
Sbjct 169 GNSVGVQFSAAVMFTVVMLLVIEIPLVSYSASPAQTQAVMQRIHDWVLPRRWQL 222
>gi|183983638|ref|YP_001851929.1| hypothetical protein MMAR_3658 [Mycobacterium marinum M]
gi|183176964|gb|ACC42074.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=262
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/237 (37%), Positives = 128/237 (55%), Gaps = 20/237 (8%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW VL+L L DP RLG++V++ SR RP+ L AFW+GG+ V +AL VL +R+
Sbjct 23 MWCTVLVLALVATADPVRLGISVLLSSRPRPLGQLIAFWLGGITTCVTLALGVLFGLREF 82
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVA---RARAQVGVPVGPV 117
L +Q V + A A G + I +GV+ LL+A V R RAQ GVP
Sbjct 83 TLETMQRV-------QHATASSAAGHIQIAMGVLALLIAGLAVGISPRQRAQFGVP---- 131
Query 118 GVADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVI 177
G ++ ARL +R Q L+ + AF++G A+ F + ALT I
Sbjct 132 -----GSNSSHWQVLTSTTFARLSMRAQFALEARPLRMAFLLG-AAMLIDFRFLAALTAI 185
Query 178 MASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQI 234
+ASGA GTQ+ A ++T++ LA IE+PL + LA P T ++M +V++ R+Q+
Sbjct 186 LASGAAAGTQVSAAGIYTVIALAFIELPLASQLAAPASTGRIMSSLHSYVKARRQQL 242
>gi|254233310|ref|ZP_04926636.1| hypothetical protein TBCG_03747 [Mycobacterium tuberculosis C]
gi|254366365|ref|ZP_04982409.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|124603103|gb|EAY61378.1| hypothetical protein TBCG_03747 [Mycobacterium tuberculosis C]
gi|134151877|gb|EBA43922.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|339296629|gb|AEJ48740.1| hypothetical protein CCDC5079_3551 [Mycobacterium tuberculosis
CCDC5079]
gi|339300227|gb|AEJ52337.1| hypothetical protein CCDC5180_3500 [Mycobacterium tuberculosis
CCDC5180]
Length=265
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/263 (35%), Positives = 133/263 (51%), Gaps = 35/263 (13%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW+ VL+L L + +P R+GL V+ML+RRRP+L+L F GG G+A+ LV +
Sbjct 29 MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVL--- 85
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLA--------ARMVARA-RAQVG 111
G A F A + I G+I LL+A + V RA A+VG
Sbjct 86 ------GATPLAGHFSVA-------EVQIGTGLIALLIAFALTTNVIGKHVRRATHARVG 132
Query 112 VPVGPVGVADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESV 171
DGG + PP +L VR + LQGD ++ A V G+ ++ P +
Sbjct 133 --------DDGGR--VLRESVPPSGAHKLAVRARCFLQGDSLYVAGVSGLGAALPSANYM 182
Query 172 VALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNR 231
A+ I+ASGA TQ A V F ++ V E+PLV+YLA P++T+ M Q W+RS
Sbjct 183 GAMAAILASGATPATQALAVVTFNVVAFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRS 242
Query 232 RQISLTILIGVGFLFLYQGVTSL 254
R+ + ++ G L L G+++L
Sbjct 243 RRDAALLVAAGGCLMLTLGLSNL 265
>gi|289445422|ref|ZP_06435166.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289418380|gb|EFD15581.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=237
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/263 (35%), Positives = 133/263 (51%), Gaps = 35/263 (13%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW+ VL+L L + +P R+GL V+ML+RRRP+L+L F GG G+A+ LV +
Sbjct 1 MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVL--- 57
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLA--------ARMVARA-RAQVG 111
G A F A + I G+I LL+A + V RA A+VG
Sbjct 58 ------GATPLAGHFSVA-------EVQIGTGLIALLIAFALTTNVIGKHVRRATHARVG 104
Query 112 VPVGPVGVADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESV 171
DGG + PP +L VR + LQGD ++ A V G+ ++ P +
Sbjct 105 --------DDGGR--VLRESVPPSGAHKLAVRARCFLQGDSLYVAGVSGLGAALPSANYM 154
Query 172 VALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNR 231
A+ I+ASGA TQ A V F ++ V E+PLV+YLA P++T+ M Q W+RS
Sbjct 155 GAMAAILASGATPATQALAVVTFNVVAFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRS 214
Query 232 RQISLTILIGVGFLFLYQGVTSL 254
R+ + ++ G L L G+++L
Sbjct 215 RRHAALLVAAGGCLMLTLGLSNL 237
>gi|15610957|ref|NP_218338.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15843445|ref|NP_338482.1| hypothetical protein MT3929 [Mycobacterium tuberculosis CDC1551]
gi|148663689|ref|YP_001285212.1| hypothetical protein MRA_3861 [Mycobacterium tuberculosis H37Ra]
63 more sequence titles
Length=237
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/263 (35%), Positives = 133/263 (51%), Gaps = 35/263 (13%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW+ VL+L L + +P R+GL V+ML+RRRP+L+L F GG G+A+ LV +
Sbjct 1 MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVL--- 57
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLA--------ARMVARA-RAQVG 111
G A F A + I G+I LL+A + V RA A+VG
Sbjct 58 ------GATPLAGHFSVA-------EVQIGTGLIALLIAFALTTNVIGKHVRRATHARVG 104
Query 112 VPVGPVGVADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESV 171
DGG + PP +L VR + LQGD ++ A V G+ ++ P +
Sbjct 105 --------DDGGR--VLRESVPPSGAHKLAVRARCFLQGDSLYVAGVSGLGAALPSANYM 154
Query 172 VALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNR 231
A+ I+ASGA TQ A V F ++ V E+PLV+YLA P++T+ M Q W+RS
Sbjct 155 GAMAAILASGATPATQALAVVTFNVVAFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRS 214
Query 232 RQISLTILIGVGFLFLYQGVTSL 254
R+ + ++ G L L G+++L
Sbjct 215 RRDAALLVAAGGCLMLTLGLSNL 237
>gi|31794995|ref|NP_857488.1| integral membrane protein [Mycobacterium bovis AF2122/97]
gi|121639738|ref|YP_979962.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224992233|ref|YP_002646923.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|31620593|emb|CAD96037.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121495386|emb|CAL73873.1| Probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224775349|dbj|BAH28155.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341603759|emb|CCC66440.1| probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=237
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/254 (34%), Positives = 127/254 (50%), Gaps = 17/254 (6%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW+ VL+L L + +P R+GL V+ML+RRRP+L+L F GG G+A+ LV +
Sbjct 1 MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVL--- 57
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
G A F A + I G+I LL+A + + V
Sbjct 58 ------GATPLAGHFSVA-------EVQIGTGLIALLIAFALTTNVIGKHVRRATHARVG 104
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
D G L PP +L VR + LQGD ++ A V G+ ++ P + A+ I+AS
Sbjct 105 DNGGRVLR-ESVPPSGTHKLAVRARCFLQGDSLYVAGVSGLGAALPSANYMGAMAAILAS 163
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
GA TQ A V F ++ V E+PLV+YLA P++T+ M Q W+RS R+ + ++
Sbjct 164 GATPATQALAVVTFNVVAFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRSRRDAALLVA 223
Query 241 GVGFLFLYQGVTSL 254
G L L G+++L
Sbjct 224 AGGCLMLTLGLSNL 237
>gi|340628790|ref|YP_004747242.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|340006980|emb|CCC46171.1| putative conserved integral membrane protein [Mycobacterium canettii
CIPT 140010059]
Length=237
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/263 (34%), Positives = 132/263 (51%), Gaps = 35/263 (13%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW+ VL+L L + +P R+GL V+ML+RRRP+L+L F GG G+A+ LV +
Sbjct 1 MWSTVLVLALSVICEPVRIGLVVLMLNRRRPLLHLLTFLCGGYTMAGGVAMVTLVVL--- 57
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLA--------ARMVARA-RAQVG 111
G A F A + I G+I LL+A + V RA A+VG
Sbjct 58 ------GATPLAGHFSVA-------EVQIGTGLIALLIAFALTTNVIGKHVRRATHARVG 104
Query 112 VPVGPVGVADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESV 171
DGG + P +L VR + LQGD ++ A V G+ ++ P +
Sbjct 105 --------DDGGR--VLRESVPSSGAHKLAVRARCFLQGDSLYVAGVSGLGAALPSANYM 154
Query 172 VALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNR 231
A+ I+ASGA TQ A V F ++ V E+PLV+YLA P++T+ M Q W+RS
Sbjct 155 GAMAAILASGATPATQALAVVTFNVVAFTVAEVPLVSYLAAPRKTRAFMAALQSWLRSRS 214
Query 232 RQISLTILIGVGFLFLYQGVTSL 254
R+ + ++ G L L G+++L
Sbjct 215 RRDAALLVAAGGCLMLALGLSNL 237
>gi|118470947|ref|YP_888992.1| hypothetical protein MSMEG_4733 [Mycobacterium smegmatis str.
MC2 155]
gi|118172234|gb|ABK73130.1| putative membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=256
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/256 (38%), Positives = 142/256 (56%), Gaps = 2/256 (0%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW+ VL+L L A+DP R+G+ ++++ R RP+ NL A+W+G M AGVG+A+ L F+ V
Sbjct 1 MWSAVLVLALVSAVDPVRIGITLLLIGRERPVANLLAYWLGLMAAGVGLAVIALTFLPGV 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARAR-AQVGVPVGPVGV 119
+ VV+AA + +A G L I + V++ + A R A ++V PV +
Sbjct 61 VRPVTEFVVAAAEKPVIPPLQIAMGLLAIPVAVVIAMRARRRTLVAPVSEVADPVSAMAF 120
Query 120 ADGGMSALALAQRPPGLVARLEVRTQ-QMLQGDVVWPAFVVGVASSAPPFESVVALTVIM 178
A A + A L++RL G+ AF G+ S+ PP E A+ I
Sbjct 121 AAAATPAASTASGKRSLLSRLSWPALFSGRWGNSAAMAFAAGLFSATPPLEYCFAILAIA 180
Query 179 ASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTI 238
ASGA IGTQ+ A VVF+L+ A+ EIPLV YLA P +T+ ++ R DW+ + RR I I
Sbjct 181 ASGAAIGTQVCAAVVFSLVSFAIAEIPLVGYLASPVKTKAIVARMHDWIGTYRRPIFACI 240
Query 239 LIGVGFLFLYQGVTSL 254
L G L L GV+++
Sbjct 241 LGLFGVLMLASGVSTI 256
>gi|15827631|ref|NP_301894.1| hypothetical protein ML1233 [Mycobacterium leprae TN]
gi|221230108|ref|YP_002503524.1| hypothetical protein MLBr_01233 [Mycobacterium leprae Br4923]
gi|466802|gb|AAA17078.1| Lepb1170_F2_64 [Mycobacterium leprae]
gi|13093182|emb|CAC31614.1| conserved membrane protein [Mycobacterium leprae]
gi|219933215|emb|CAR71328.1| conserved membrane protein [Mycobacterium leprae Br4923]
Length=230
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/255 (35%), Positives = 128/255 (51%), Gaps = 26/255 (10%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW +LL+ + ++++P R+G+ V+ML+R RP L L F G G+ + VL R
Sbjct 1 MWITILLMAIAISLEPFRIGMTVLMLNRPRPTLQLLVFLCSGFTMGMTVGFVVLFVFRRR 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPV-GPVGV 119
+A++Q L ++ I+IGV+ LL+AA + + P PV
Sbjct 61 LMASMQ---------------LTLPKVQILIGVLALLVAAVLTVQVCISSEPPAESPVDS 105
Query 120 ADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMA 179
A G A RP +ARL L GD +W A V G+ + P + + AL VI+
Sbjct 106 ASGPPKPSKWAPRP---LARL-------LNGDSLWVAGVAGLGIALPSVDYLAALAVILT 155
Query 180 SGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTIL 239
SGA TQ+GA ++F ++ A+IEIPL AYL P T+ +W+RS RR T+L
Sbjct 156 SGAAATTQVGALLMFNVVAFALIEIPLAAYLLAPDTTRAWTAALNNWIRSRRRLEVATLL 215
Query 240 IGVGFLFLYQGVTSL 254
GV L L G+ L
Sbjct 216 AGVSCLLLAVGIAGL 230
>gi|146760141|emb|CAJ77662.1| gap like protein [Mycobacterium chelonae]
Length=217
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/254 (33%), Positives = 129/254 (51%), Gaps = 37/254 (14%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW +L++ L ++ +P RLG+ V+ML+R RP L L AF GG G + L VL R V
Sbjct 1 MWITLLVMALAVSFEPFRLGMTVLMLNRPRPQLQLLAFLCGGFAMGTAVGLVVLFTFRHV 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
+ + Q + R+ I IGV LL+AA + +R R GP A
Sbjct 61 STGSAQFTLP---------------RVQIGIGVAALLVAALLASRVR-------GPSSNA 98
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
+ ++ R Q + G +W A V G+ + P + + AL VI+AS
Sbjct 99 Q---------------LDKVTGRIQSIATGGSLWVALVAGLGIALPSVDFLAALAVIVAS 143
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
G TQ+ A ++F ++ A+IEIPL+A++ P++T +VM R W++SNRR+ +L
Sbjct 144 GTPAATQVSALLMFNIIAFALIEIPLLAHVVAPERTAEVMARLNSWIQSNRRRNIALVLA 203
Query 241 GVGFLFLYQGVTSL 254
VG + L G+ ++
Sbjct 204 VVGCVLLAVGLAAI 217
>gi|169628031|ref|YP_001701680.1| hypothetical protein MAB_0934 [Mycobacterium abscessus ATCC 19977]
gi|146760174|emb|CAJ77671.1| gap like protein [Mycobacterium abscessus]
gi|169239998|emb|CAM61026.1| Conserved hypothetical integral membrane protein [Mycobacterium
abscessus]
Length=217
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/251 (32%), Positives = 128/251 (51%), Gaps = 37/251 (14%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW +L++ + ++ +P RLG+ V+ML+R RPML L AF GG V G+ + L VL R+V
Sbjct 1 MWITLLVMAIAVSFEPFRLGMTVLMLNRPRPMLQLLAFLSGGFVMGMAVGLVVLFAFRNV 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
+ + + R+ I IGV LL+AA + +R R GP A
Sbjct 61 STGSAHFTLP---------------RVQIGIGVAALLVAALVASRLR-------GPASHA 98
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
+ ++ R Q + G +W A V G+ + P + + AL VI+AS
Sbjct 99 Q---------------LDKVSARIQSIATGGSLWVAGVAGLGIALPSVDFLAALAVIVAS 143
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
G+ TQ+ A ++F ++ A++EIP +A+ P++T + M R W++SNRR+ +L
Sbjct 144 GSPPATQISALLMFNVIAFALVEIPFLAHAVAPERTAEAMARLNSWIQSNRRRNIALVLT 203
Query 241 GVGFLFLYQGV 251
VG + L G+
Sbjct 204 AVGCVLLAVGL 214
>gi|118470074|ref|YP_884826.1| hypothetical protein MSMEG_0413 [Mycobacterium smegmatis str.
MC2 155]
gi|118171361|gb|ABK72257.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=225
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/258 (31%), Positives = 127/258 (50%), Gaps = 37/258 (14%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW +LL+ ++++P R+G+ VVM++R +P L L F GG + G + + VL MR
Sbjct 1 MWIPLLLMAAVISLEPFRIGMTVVMINRPQPALQLSTFLAGGFLMGTAVGMVVLFVMRP- 59
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
A G H + + + + A ++A A V VA
Sbjct 60 ----------------------ALGSAHFTLPRVQIAVGALILANA----------VLVA 87
Query 121 DGGMSALALAQRPPGLVARL----EVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTV 176
G + PPG V R+ RT+ +L G +W A V G+ + P + + AL +
Sbjct 88 TGLLGGRRKDPGPPGRVRRMLGPAADRTRTLLTGSSLWAAGVAGLGIALPSVDYLAALAL 147
Query 177 IMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISL 236
I+ASGA TQ GA ++F ++ A++EIPLV YL P++T+ + DW+++ R+
Sbjct 148 IVASGAAASTQFGALMLFNVVAFALVEIPLVCYLVAPERTRATLAAVYDWLKARGRRGFA 207
Query 237 TILIGVGFLFLYQGVTSL 254
T+L VG + L G+ +L
Sbjct 208 TLLAVVGCMLLGVGIAAL 225
>gi|85541019|gb|ABC70856.1| Gap-like [Mycobacterium smegmatis str. MC2 155]
Length=229
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/258 (31%), Positives = 127/258 (50%), Gaps = 37/258 (14%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW +LL+ ++++P R+G+ VVM++R +P L L F GG + G + + VL MR
Sbjct 5 MWIPLLLMAAVISLEPFRIGMTVVMINRPQPALQLSTFLAGGFLMGTAVGMVVLFVMRP- 63
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
A G H + + + + A ++A A V VA
Sbjct 64 ----------------------ALGSAHFTLPRVQIAVGALILANA----------VLVA 91
Query 121 DGGMSALALAQRPPGLVARL----EVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTV 176
G + PPG V R+ RT+ +L G +W A V G+ + P + + AL +
Sbjct 92 TGLLGGRRKDPGPPGRVRRMLGPAADRTRTLLTGSSLWAAGVAGLGIALPSVDYLAALAL 151
Query 177 IMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISL 236
I+ASGA TQ GA ++F ++ A++EIPLV YL P++T+ + DW+++ R+
Sbjct 152 IVASGAAASTQFGALMLFNVVAFALVEIPLVCYLVAPERTRATLAAVYDWLKARGRRGFA 211
Query 237 TILIGVGFLFLYQGVTSL 254
T+L VG + L G+ +L
Sbjct 212 TLLAVVGCMLLGVGIAAL 229
>gi|342857526|ref|ZP_08714182.1| hypothetical protein MCOL_01580 [Mycobacterium colombiense CECT
3035]
gi|342134859|gb|EGT88025.1| hypothetical protein MCOL_01580 [Mycobacterium colombiense CECT
3035]
Length=217
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/242 (35%), Positives = 120/242 (50%), Gaps = 37/242 (15%)
Query 13 AIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALAAIQGVVSAA 72
+++P R+G+ V+ML+R RPML L +F GG G+ + L V+ R L + +
Sbjct 13 SLEPFRIGMTVLMLNRPRPMLQLLSFLGGGFAMGMTVGLLVVFVFRRTLLGSTYFTLP-- 70
Query 73 NEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADGGMSALALAQR 132
R+ I+IGV LLLAA +VA R P
Sbjct 71 -------------RVQILIGVFALLLAATLVAMDRTHRSGP------------------- 98
Query 133 PPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAEIGTQLGAFV 192
PG++A R QQ+L G +W A V G+ + P + + AL VI+ASGA TQ+GA +
Sbjct 99 QPGMLA---TRVQQLLNGRSLWIAGVAGLGIALPSVDYLAALAVILASGATATTQVGALL 155
Query 193 VFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVGFLFLYQGVT 252
VF + A++EIPL++YL PQ T M+ W+RS RR +L VG + L G
Sbjct 156 VFNCVAFALVEIPLLSYLLAPQATHASMVALHGWIRSRRRIEVAALLAAVGCVLLAIGGA 215
Query 253 SL 254
+L
Sbjct 216 NL 217
>gi|342860078|ref|ZP_08716730.1| putative integral membrane protein [Mycobacterium colombiense
CECT 3035]
gi|342132456|gb|EGT85685.1| putative integral membrane protein [Mycobacterium colombiense
CECT 3035]
Length=238
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/254 (34%), Positives = 125/254 (50%), Gaps = 16/254 (6%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW VL+L + +P RLGL V++LSR+RP+ L F GG+ G G+ L VL +R
Sbjct 1 MWITVLILAGSVIFEPIRLGLVVLLLSRKRPLRQLLVFCCGGLTMGSGVGLVVLFVLRA- 59
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
A + G VS A ++ + G + LL+AA + A V P
Sbjct 60 --APVFGHVSVA-------------QVQLASGFVALLIAAAIAANTVRHKPVRRSPANAE 104
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
G L + PG +A+L R + LQGD + A+V G+ ++ P + ++ I+AS
Sbjct 105 AAGGGVALLERTQPGALAKLTGRARAFLQGDSLRVAWVSGLGAALPSANYMASMAAILAS 164
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILI 240
A TQ A V + L+ V EIPLV+ L P++T+ M+ Q W+RS R ++
Sbjct 165 HAGAVTQAQAVVAYNLVAFTVAEIPLVSCLLAPRRTRASMVALQTWLRSRTRGDIAALIA 224
Query 241 GVGFLFLYQGVTSL 254
G L G+TSL
Sbjct 225 TGGAAMLALGLTSL 238
>gi|240173293|ref|ZP_04751951.1| hypothetical protein MkanA1_28531 [Mycobacterium kansasii ATCC
12478]
Length=262
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/255 (35%), Positives = 135/255 (53%), Gaps = 22/255 (8%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW VL+LGL DP R+G++V++ S+ R + L AFW+GG+ V +A VL +R
Sbjct 23 MWGTVLVLGLVATADPVRIGISVLLSSQPRAVGQLVAFWLGGIFTSVALATGVLFGLRGF 82
Query 61 ALAAIQGV-VSAANEFREAVGILAGGRLHIVIGVIMLLLAA---RMVARARAQVGVPVGP 116
AL + V V+ A+ G + I +GV LL+AA R+ R ++G+
Sbjct 83 ALDVMHRVEVATASS--------TAGHIQIAMGVTALLIAALAIRLSPGQRIRLGMT--- 131
Query 117 VGVADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTV 176
G + L R ++RL R Q LQ + AFV+GV A +VALT
Sbjct 132 ------GANPSQLQVRTSMTISRLSTRAQFALQARPLRVAFVLGVGMLAD-LRFLVALTA 184
Query 177 IMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISL 236
I+ASGA + TQ+ A V+TL+ L +E+PL + LA P +T Q+M Q WV++ R QI
Sbjct 185 ILASGAAVATQVTAAGVYTLVALTFVELPLASQLAAPAKTGQIMSVLQRWVKARRHQIFA 244
Query 237 TILIGVGFLFLYQGV 251
++ +G + +G+
Sbjct 245 VVIALLGAFLMTRGM 259
>gi|120401303|ref|YP_951132.1| hypothetical protein Mvan_0277 [Mycobacterium vanbaalenii PYR-1]
gi|119954121|gb|ABM11126.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=220
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/251 (30%), Positives = 124/251 (50%), Gaps = 41/251 (16%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW +L++ ++++P R+G+ VVM++R RP+L L +F GG V G + L VL +R
Sbjct 1 MWFPLLVMAAAVSLEPFRIGMTVVMVNRPRPVLQLLSFLAGGFVMGTAVGLIVLFVLRP- 59
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
AL + + R+ + +G ++L+ A + GV
Sbjct 60 ALGSAHFTLP---------------RVQLGVGAVVLVNAVLLA-------------TGVL 91
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
G A + P L R +++L+G +W A V G+ + P + + AL +I+AS
Sbjct 92 GGNRDGTAAGRWAP-----LVTRARRLLEGRSLWTAGVAGLGIALPSIDYLAALALIVAS 146
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSN-RRQISL--- 236
GA Q A +VF ++ A++EIPL+ YL P +T+ + +WVR+ RR +SL
Sbjct 147 GAAAAVQFSALIVFNVVAFALVEIPLLCYLVAPDRTRAALSSLYEWVRAQGRRGVSLLLA 206
Query 237 ---TILIGVGF 244
+L+ VGF
Sbjct 207 VVGCVLVAVGF 217
>gi|41407516|ref|NP_960352.1| hypothetical protein MAP1418c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395869|gb|AAS03735.1| hypothetical protein MAP_1418c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336457870|gb|EGO36864.1| Protein of unknown function (DUF2910) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=261
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/267 (32%), Positives = 131/267 (50%), Gaps = 25/267 (9%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW VL LG+ A++P RLGLA++M+SR RP +L A+W+GG+ + V + V
Sbjct 1 MWGSVLGLGMLAALNPVRLGLALLMISRPRPGSSLLAYWIGGL------TVCVPELLIPV 54
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVA---------------R 105
L + + + G LA G++ I +GV+ L +AA + R
Sbjct 55 LLLNFTPMFGHPSHASPSTG-LALGKIQIGLGVVGLSIAAVLTVRFAARQRAAAPPPDDR 113
Query 106 ARAQVGVPVGPVGVADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSA 165
P + + A ++ ++ RL R + W A+V+GV S
Sbjct 114 TSELSAAPGATIAMPRLLTRAQDVSPDDRSVLRRLLGRMHSAWESGASWVAWVIGVISV- 172
Query 166 PPFESVVAL-TVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQ 224
P + V+ + +I ASGA + Q+ A V F +L+ AV+E+ LV YLA P +TQ ++L
Sbjct 173 -PVDGVLFIVAIIAASGASVTAQVSASVAFVVLMYAVVEVILVGYLATPGKTQSLLLVLH 231
Query 225 DWVRSNRRQISLTILIGVGFLFLYQGV 251
DWVR+ RQI + + VG L QG+
Sbjct 232 DWVRTYHRQILVALFTVVGVSQLAQGL 258
>gi|118462330|ref|YP_882244.1| hypothetical protein MAV_3059 [Mycobacterium avium 104]
gi|118163617|gb|ABK64514.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=261
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/267 (32%), Positives = 132/267 (50%), Gaps = 25/267 (9%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW VL LG+ A++P RLGLA++M+SR RP +L A+W+GG+ V L ++ +
Sbjct 1 MWGSVLGLGMLAALNPVRLGLALLMISRPRPGPSLLAYWIGGLTVCVPELLIPVLLLN-- 58
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVA---------------R 105
+ G S A+ + A G++ I +GV+ L +AA + R
Sbjct 59 -FTPMFGHPSHASPSTGS----ALGKIQIGLGVVGLSIAAVLTVRFAARQRAAAPPPDDR 113
Query 106 ARAQVGVPVGPVGVADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSA 165
P + + A ++ ++ RL R + W A+V+GV S
Sbjct 114 TSELSAAPGATIAMPRLLTRAQDVSPDDRSVLRRLLGRMHSAWESGASWVAWVIGVISV- 172
Query 166 PPFESVVAL-TVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQ 224
P + V+ + +I ASGA + Q+ A V F +L+ AV+E+ LV YLA P +TQ ++L
Sbjct 173 -PVDGVLFIVAIIAASGASVTAQVSASVAFVVLMYAVVEVILVGYLATPGKTQSLLLVLH 231
Query 225 DWVRSNRRQISLTILIGVGFLFLYQGV 251
DWVR+ RQI + + VG L QG+
Sbjct 232 DWVRTYHRQILVALFTVVGVSQLAQGL 258
>gi|296166953|ref|ZP_06849369.1| GAP family peptidoglyclipid addressing protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295897692|gb|EFG77282.1| GAP family peptidoglyclipid addressing protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=242
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/254 (35%), Positives = 125/254 (50%), Gaps = 19/254 (7%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW VL+L + +P RLGL V++LSRRRP++ L F GG GVG L VL +R
Sbjct 1 MWITVLVLAGAVMFEPIRLGLVVLLLSRRRPLVQLLVFLGGGFAMGVGAGLVVLFILRT- 59
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGV-PVGPVGV 119
A + G V+ + I G++ L++AA + +A + V PV
Sbjct 60 --APVVGHVNVPE-------------VQIASGLVALVIAAVLATKASLRKLVRPVPADAA 104
Query 120 ADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMA 179
GG L P L R + ++GD + A V G+ +S P + ++ I+A
Sbjct 105 VGGGGGVGLLEGAAPTGRRPLAERARSFVRGDSLGVAAVSGMGASLPSANYMGSMAAILA 164
Query 180 SGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSN-RRQISLTI 238
S A TQ+ A + F L+ V EIPL+ YLA PQ+T+ M Q+W+RS R I+ +
Sbjct 165 SHAAPVTQVQALLAFNLVAFTVAEIPLIGYLAAPQKTRAFMGALQNWLRSRGHRDIAALV 224
Query 239 LIGVGFLFLYQGVT 252
G G L L GVT
Sbjct 225 AAG-GCLMLILGVT 237
>gi|145221004|ref|YP_001131682.1| hypothetical protein Mflv_0400 [Mycobacterium gilvum PYR-GCK]
gi|315442024|ref|YP_004074903.1| hypothetical protein Mspyr1_03550 [Mycobacterium sp. Spyr1]
gi|145213490|gb|ABP42894.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315260327|gb|ADT97068.1| hypothetical protein Mspyr1_03550 [Mycobacterium sp. Spyr1]
Length=218
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/232 (33%), Positives = 119/232 (52%), Gaps = 36/232 (15%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW +L + + ++++P R+G+ V+M++R RP L L AF GG G + +AVL +R V
Sbjct 1 MWITLLAMAVAVSLEPFRIGMTVLMINRPRPGLQLLAFLTGGFAMGTAVGVAVLFLLRPV 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
L + Q + R+ IV+G+++L AA A VG P P
Sbjct 61 -LDSAQFTLP---------------RVQIVVGLVVLCTAA---AVGSGLVGRPRDP---- 97
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
R PG++A +R +++L G +W A VG+ ++ P + + AL +I AS
Sbjct 98 ----------GRAPGVLA---MRARRLLDGRSLWTAAAVGLGTALPSVDYLAALALIAAS 144
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRR 232
GA TQ GA + F + A+IEIPL+ YL P +T+ V+ W+R+ R
Sbjct 145 GAAAATQFGALMAFNAVAFALIEIPLLCYLVSPDRTRAVLASLNSWIRARGR 196
>gi|169631771|ref|YP_001705420.1| hypothetical protein MAB_4698 [Mycobacterium abscessus ATCC 19977]
gi|169243738|emb|CAM64766.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=310
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/280 (30%), Positives = 140/280 (50%), Gaps = 51/280 (18%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMV---AGVGIALAVLVFM 57
+W ++L + + A++P L + V+M+SR RP+ NL A+W+G M+ AG+ + LAVL
Sbjct 52 VWGLLLAMAIMFAVNPVLLAVIVLMISRPRPVQNLAAYWLGSMIVSLAGLLVPLAVL--- 108
Query 58 RDVALAAIQGVVSAANEFREAVGILA--GGRL-----HIVIGVIMLLLAARMVARA-RAQ 109
A FR V +A G + ++ +G++ML +A + RA R +
Sbjct 109 ------------HVAPSFRSFVENMAVPGSNVTTRVVNLGMGLLMLSIATLLAVRALRER 156
Query 110 VGVPV-----------------GPVGVA-DGGMSALALAQRPPGLVARLEVRTQQMLQGD 151
+PV P GV+ + G++A ++ +R ++ L++ +Q
Sbjct 157 THIPVAASNVPTVDSEKPRPITSPFGVSSNSGVAAGSIFRR---VLRHLQIAWEQ----G 209
Query 152 VVWPAFVVGVASSAPPFESVVALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLA 211
+W AFV G+ PP + LT ++ASG+ IGTQ+ A + F + V E+ L+ YL
Sbjct 210 ALWVAFVFGLCGLPPPMLVIFVLTPVVASGSTIGTQIIAVIAFVFGMFTVAELTLICYLI 269
Query 212 IPQQTQQVMLRFQDWVRSNRRQISLTILIGVGFLFLYQGV 251
P +T V+ DW ++RRQ+ +TI G + + GV
Sbjct 270 APARTIAVLQPLHDWALAHRRQMLITIFSIAGIIQVINGV 309
>gi|108797229|ref|YP_637426.1| hypothetical protein Mmcs_0249 [Mycobacterium sp. MCS]
gi|119866314|ref|YP_936266.1| hypothetical protein Mkms_0259 [Mycobacterium sp. KMS]
gi|126432852|ref|YP_001068543.1| hypothetical protein Mjls_0239 [Mycobacterium sp. JLS]
gi|108767648|gb|ABG06370.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692403|gb|ABL89476.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126232652|gb|ABN96052.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=222
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/251 (30%), Positives = 129/251 (52%), Gaps = 39/251 (15%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW +L++ + ++++P R+G+ V+M++R +P L A GG G+ + + VL +R
Sbjct 1 MWIPLLVMAVAVSLEPFRVGMTVLMINRPQPRRQLLALLAGGFAMGLTVGVIVLFVLRPA 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
+A F V + I +G ++L+ AA +VA GV
Sbjct 61 LDSA---------HFTLPV-------VQIAVGAVVLVNAA-LVA------------TGVW 91
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
G A++LA G L RT+++L G +W A + G+ + P + + AL +I+AS
Sbjct 92 GRGRDAVSLADTRFG---PLATRTRRLLDGRSLWTAGIAGLGIALPSVDYLAALALIVAS 148
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQ------- 233
GA QLGA +VF ++ A++EIPL+ YL P++T+ + +W+R+ R+
Sbjct 149 GAATTVQLGALMVFNVVAFALVEIPLLCYLVAPERTRAALSALYEWLRAQGRRGVGALLA 208
Query 234 ISLTILIGVGF 244
+ +L+GVGF
Sbjct 209 VIGCVLLGVGF 219
>gi|169631175|ref|YP_001704824.1| hypothetical protein MAB_4097c [Mycobacterium abscessus ATCC
19977]
gi|146760172|emb|CAJ77717.1| gap protein [Mycobacterium abscessus]
gi|169243142|emb|CAM64170.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=267
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/252 (31%), Positives = 120/252 (48%), Gaps = 27/252 (10%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGV-GIALAVLVFMRD 59
MW +L L M+++P LGL +V++SR RP+ NL AFWVG +V V +A+
Sbjct 1 MWRELLGLAFLMSLNPVLLGLILVVISRPRPVQNLLAFWVGALVVNVPSFVIALFALHMV 60
Query 60 VALAAIQGVVSAANEFREAVGI-LAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVG 118
+ A+ ++ A+ + L G L +VI V +A R+ +R R V G
Sbjct 61 PSFASFAKNLATADPGSSIKPLQLGTGVLCVVIAV---WIATRLRSRQRENQPVATG--- 114
Query 119 VADGGMSALALAQRPPGLVAR------------------LEVRTQQMLQGDVVWPAFVVG 160
A G S L L P + AR L R + + +W A V+G
Sbjct 115 -AGGDSSVLVLDSEAPAVEARPVGRIRGAVSYLGSTFQRLLHRGKGAWENGALWVALVLG 173
Query 161 VASSAPPFESVVALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVM 220
+ PP ++ T+I+ SG + TQ+ A VVF +LAV EI L++Y+ P +TQ V+
Sbjct 174 IGYMPPPPLVLLVDTIIVGSGTAMSTQVIAAVVFVFTMLAVFEIALISYVIAPARTQAVL 233
Query 221 LRFQDWVRSNRR 232
+W S+R+
Sbjct 234 EPIHNWALSHRQ 245
>gi|169630228|ref|YP_001703877.1| hypothetical protein MAB_3146c [Mycobacterium abscessus ATCC
19977]
gi|169242195|emb|CAM63223.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=227
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/232 (31%), Positives = 116/232 (50%), Gaps = 30/232 (12%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MWT+VLL+ +G++++P RLGL V+ML+R RP+L LF F G G+ + L +L +R
Sbjct 1 MWTIVLLMAIGVSVEPTRLGLTVLMLNRPRPLLQLFVFLCGAFAMGLSLGLTLLFVLR-- 58
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVA 120
VS + ++G + I +GV+ LL+AA + A
Sbjct 59 --------VSPVGK-----ADVSGPYIQIGLGVLALLVAAVLAVTA-------------- 91
Query 121 DGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMAS 180
G A + G +L R + LQ + +W A V G+ + P + + + +I AS
Sbjct 92 -SGSRPPAAPRTTTGFAGKLATRVRGFLQNNSLWVAGVSGLGIALPSADFLAVIALIHAS 150
Query 181 GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRR 232
G Q A + F ++ +++ +PL++Y A+P +T Q++ WVRS RR
Sbjct 151 GETQPVQSMALLFFNVVAFSMVGLPLLSYAAMPGRTYQMVSALHTWVRSRRR 202
>gi|118468883|ref|YP_884816.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|46810982|gb|AAT01808.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118170170|gb|ABK71066.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=272
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/278 (32%), Positives = 135/278 (49%), Gaps = 36/278 (12%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW+ +L L L ++++P LG +++LSR RP+ NL FWVG ++ V L L +R V
Sbjct 1 MWSDILGLALFVSLNPLLLGFILLVLSRPRPVPNLVVFWVGCLIVNVPGFLIPLFVLRAV 60
Query 61 -ALAAIQGVVSAANE------FREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVP 113
+ A ++ A+ F+ GI A + ++A RM + RA V
Sbjct 61 PSFAEFAEDLTTADPSSGIEPFQLGTGIFALA--------VSAVIALRMWVKRRANQPVL 112
Query 114 VGPVGVADGG---------MSALALAQRPPGLVARLEVRTQQMLQ-----------GDVV 153
VG G D G + + A R PG +AR+ +R + LQ +
Sbjct 113 VG-SGAGDRGPTDDASTLVLDSGAREAREPGAIARMILRMRSALQRLVSRLHQEWENGAL 171
Query 154 WPAFVVGVASSAPPFESVVALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIP 213
W A V G+A PP ++ T+I SGA IGTQ+ A VF + +LAV EI L++Y+ P
Sbjct 172 WVALVFGLAYIPPPPLVLLVDTIIGGSGAPIGTQIIAVFVFIMAMLAVFEITLLSYVIAP 231
Query 214 QQTQQVMLRFQDWVRSNRRQISLTILIGVGFLFLYQGV 251
++TQ V+ +W +R+ I L + VG L G+
Sbjct 232 RRTQAVLEPLHEWSHRHRQMILLVLFGAVGIWELIVGL 269
>gi|254775512|ref|ZP_05217028.1| hypothetical protein MaviaA2_12706 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=252
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/258 (33%), Positives = 128/258 (50%), Gaps = 31/258 (12%)
Query 13 AIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALAAIQGVVSAA 72
A++P RLGLA++M+SR RP +L A+W+GG+ V L ++ + + G S A
Sbjct 4 ALNPVRLGLALLMISRPRPGPSLLAYWIGGLTVCVPELLIPVLLLN---FTPMFGHPSHA 60
Query 73 NEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADGGMSALALAQR 132
+ + A G++ I +GV+ L +AA + R A+ D S L+ A
Sbjct 61 SPSTGS----ALGKIQIGLGVVGLSIAAVLTVRFAARQRAAAP---PPDERASELSAAPG 113
Query 133 PPGLVARLEVRTQQMLQGD------------------VVWPAFVVGVASSAPPFESVVAL 174
+ RL R Q + GD W A+V+GV S P + V+ +
Sbjct 114 ATIAMPRLLTRAQDVSPGDRSVLRRMLARMHSAWESGASWVAWVIGVISV--PVDGVLFI 171
Query 175 -TVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQ 233
+I ASGA + Q+ A V F +L+ AV+E+ LV YLA P +TQ ++L DWVR+ RQ
Sbjct 172 VAIIAASGASVTAQVSASVAFVVLMYAVVEVILVGYLATPGKTQSLLLVLHDWVRTYHRQ 231
Query 234 ISLTILIGVGFLFLYQGV 251
I + + VG L QG+
Sbjct 232 ILVALFTVVGVSQLAQGL 249
>gi|146760135|emb|CAJ77697.1| gap protein [Mycobacterium chelonae]
Length=267
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/272 (30%), Positives = 129/272 (48%), Gaps = 29/272 (10%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW +L L M+++P LGL +V++SR RP+ NL AFWVG ++ V L L + V
Sbjct 1 MWRELLGLAFLMSLNPVLLGLILVVISRPRPVQNLLAFWVGALIVNVPSFLVALFALHLV 60
Query 61 -ALAAIQGVVSAANEFREAVGI-LAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVG 118
+ A+ ++ A+ + L G L IV+ V+ +A R+ +R R PV
Sbjct 61 PSFASFAKNLATADPGSSVKPLQLGTGVLCIVLAVV---IAVRLRSRKREN-----QPVA 112
Query 119 VADGGMSA-LALAQRPP------------------GLVARLEVRTQQMLQGDVVWPAFVV 159
GG S+ L L P RL + + +W A V+
Sbjct 113 AGGGGDSSVLVLDPETPTAEPQSVGRIRSAIAVVVSKFRRLFHHGKGAWENGALWVALVL 172
Query 160 GVASSAPPFESVVALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQV 219
G+ PP ++ T+I+ SG +GTQ+ A +VF +LAV E+ L++Y+ P +TQ V
Sbjct 173 GIGYMPPPPLVLLVDTIIVGSGTSMGTQILAAIVFVFAMLAVFEVALISYVIAPARTQAV 232
Query 220 MLRFQDWVRSNRRQISLTILIGVGFLFLYQGV 251
+ +W ++R+ + L + VG + GV
Sbjct 233 LEPVHNWALAHRQLVLLILFAVVGVWQVLTGV 264
>gi|254818761|ref|ZP_05223762.1| hypothetical protein MintA_02494 [Mycobacterium intracellulare
ATCC 13950]
Length=228
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (50%), Gaps = 26/225 (11%)
Query 8 LGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDVALAAIQG 67
+ L ++++P R+G+ V+ML+R +P+L L AF GG G+ + VL +R V L +
Sbjct 8 MALAVSLEPFRIGMTVLMLNRPKPLLQLLAFVAGGFAMGLTVGATVLFLLRRVLLRSTYF 67
Query 68 VVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQVGVPVGPVGVADGGMSAL 127
+ A+ + A L + I + R R GVP
Sbjct 68 TLPRVQILIGALALAAAAGLAVKI----------VADRRRGSRGVP-------------- 103
Query 128 ALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAEIGTQ 187
R A L R +++L G +W A G+ + P + + AL VI+ASGA + TQ
Sbjct 104 --PDRDRAGPAWLTTRLRRLLDGRSLWVAAAAGLGIALPSVDYLAALAVILASGAPVMTQ 161
Query 188 LGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRR 232
LGA ++F ++ +++EIPLVAYL P T+ M QDW+RS RR
Sbjct 162 LGALLMFNVIAFSLVEIPLVAYLLAPTATRAAMTALQDWIRSRRR 206
>gi|342860689|ref|ZP_08717339.1| hypothetical protein MCOL_17498 [Mycobacterium colombiense CECT
3035]
gi|342131713|gb|EGT84970.1| hypothetical protein MCOL_17498 [Mycobacterium colombiense CECT
3035]
Length=264
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/272 (33%), Positives = 134/272 (50%), Gaps = 26/272 (9%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW VL LG+ A++P RLGLA++M+SR RP +L A+W+GG+ + L L+ +
Sbjct 1 MWGSVLGLGILAALNPVRLGLALLMISRPRPGPSLLAYWLGGLTVCIPELLIPLLLLNFT 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVAR--ARAQVGVPVGPVG 118
+ SA+ A+G ++ I +GV+ L +AA + R R + PV P
Sbjct 61 PMFGHVAHGSASPSTNSALG-----KIQIGLGVVGLSIAAVLTVRFLVRPRTPQPV-PED 114
Query 119 VADGGMSALALAQRP---------------PGLVARLEVRTQQMLQGDVVWPAFVVGVAS 163
MS ++ A P P V RL R + W A+V+G+ S
Sbjct 115 ARSPEMSMVSGAPIPMPRLLTRVPEESVRNPSPVRRLLNRIHDAWESGSSWVAWVIGIIS 174
Query 164 SAPPFESVVAL-TVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLR 222
P + V+ + +I ASGA + Q A V F LL+ AV+E+ LV Y+ P +TQ ++L
Sbjct 175 V--PVDGVLFIVAIIAASGASVSAQASASVAFILLMYAVVEVILVGYVVAPAKTQTLLLV 232
Query 223 FQDWVRSNRRQISLTILIGVGFLFLYQGVTSL 254
+WVRS R I + + VG L QG+ L
Sbjct 233 LHNWVRSYHRHILVALFTVVGVSQLAQGLHVL 264
>gi|41408334|ref|NP_961170.1| hypothetical protein MAP2236 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463397|ref|YP_880983.1| hypothetical protein MAV_1758 [Mycobacterium avium 104]
gi|41396690|gb|AAS04553.1| hypothetical protein MAP_2236 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118164684|gb|ABK65581.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336458229|gb|EGO37210.1| Protein of unknown function (DUF2910) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=216
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 0/110 (0%)
Query 145 QQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAEIGTQLGAFVVFTLLVLAVIEI 204
Q++L GD + A + G+ + P + + AL VI+ASGA TQ+GA ++F ++ A++EI
Sbjct 107 QRLLNGDSLSVAGLAGLGIALPSVDYLAALAVIVASGAAAATQVGALLLFNVVAFALVEI 166
Query 205 PLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVGFLFLYQGVTSL 254
PL+AYL P +T M +W+RS RR +L G +FL GVT L
Sbjct 167 PLLAYLVAPARTAASMTALHNWIRSRRRPQVAVLLAAAGCVFLTVGVTGL 216
>gi|254774574|ref|ZP_05216090.1| hypothetical protein MaviaA2_07883 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=215
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 0/110 (0%)
Query 145 QQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMASGAEIGTQLGAFVVFTLLVLAVIEI 204
Q++L GD + A + G+ + P + + AL VI+ASGA TQ+GA ++F ++ A++EI
Sbjct 106 QRLLNGDSLSVAGLAGLGIALPSVDYLAALAVIVASGAAAATQVGALLLFNVVAFALVEI 165
Query 205 PLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVGFLFLYQGVTSL 254
PL+AYL P +T M +W+RS RR +L G +FL GVT L
Sbjct 166 PLLAYLVAPARTAASMTALHNWIRSRRRPQVAVLLAAAGCVFLTVGVTGL 215
>gi|169631770|ref|YP_001705419.1| hypothetical protein MAB_4697 [Mycobacterium abscessus ATCC 19977]
gi|169243737|emb|CAM64765.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=262
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/272 (28%), Positives = 123/272 (46%), Gaps = 34/272 (12%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW VL L + +A++P RLG+ ++++SR +P+ NL +W G ++ + + L +
Sbjct 1 MWGSVLALVVLVALNPIRLGITLLVISRPKPVPNLLVYWAGCLIGCIPAVVLPLTLLH-- 58
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGV------IMLLLAARMVARARAQVGVPV 114
V F E V I R HI +G+ + +L+A R + R R
Sbjct 59 -------VTPVFRSFAEGVAISPTIR-HIQVGMGLLALSVAVLIATRPLLRQRQYHMAIS 110
Query 115 GPVGVADGGMSALALAQRPPGLVARLEVRTQQ-------ML-------QGDVVWPAFVVG 160
G V D A R L+ + T Q ML + +W AF +G
Sbjct 111 GNVPPTDADSPAPNPLSR---LLGHADDDTSQDRSPFRRMLNRATFAWETGSLWVAFAIG 167
Query 161 VA-SSAPPFESVVALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQV 219
+ P + + +++ SGA TQ+ VF L VLA++E+ L++YL P +T V
Sbjct 168 LLLGGIEPDAGLFLIAILVTSGANTATQIIVAAVFALGVLAIVELTLISYLVAPTKTHAV 227
Query 220 MLRFQDWVRSNRRQISLTILIGVGFLFLYQGV 251
+ R DW ++RR+I + + + G L G+
Sbjct 228 VQRVHDWALTHRRKILIAMCMVAGISLLIHGL 259
>gi|126435681|ref|YP_001071372.1| hypothetical protein Mjls_3102 [Mycobacterium sp. JLS]
gi|126235481|gb|ABN98881.1| hypothetical protein Mjls_3102 [Mycobacterium sp. JLS]
Length=240
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/239 (29%), Positives = 111/239 (47%), Gaps = 26/239 (10%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MWT VLLLGL ++I+P RLGL ++L+R RP+ +L F + G+ + + L VL
Sbjct 1 MWTTVLLLGLTVSIEPTRLGLIALLLTRPRPVRHLIVFQITGLTISLSVGLTVLFVFHHS 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVAR------ARAQVGVPV 114
L +S A L I GV++LLLAA + + +R +V
Sbjct 61 FLG--NSDISPAP-------------LQIAFGVVVLLLAAVLASNVPLNRFSRQKV---- 101
Query 115 GPVGVADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVAL 174
P + + P ARL R ++ +G+ + +G A++ P + L
Sbjct 102 -PAAGGADVAAVEDVLPSPTSRRARLLQRVRRFARGESSALSASIGAATAMPSIDYFALL 160
Query 175 TVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQ 233
+I+AS A Q A + F LL A +PL++++ P +T+ + WVR+ R+
Sbjct 161 AIIIASKAPALEQAVALLTFLLLAGAGASLPLLSFIVAPARTRIWVQELSSWVRNRTRK 219
>gi|118469152|ref|YP_887333.1| hypothetical protein MSMEG_3015 [Mycobacterium smegmatis str.
MC2 155]
gi|118170439|gb|ABK71335.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=248
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/255 (26%), Positives = 123/255 (49%), Gaps = 8/255 (3%)
Query 1 MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAGVGIALAVLVFMRDV 60
MW+ VL++ + +DP R+G+ MLSRR PM L F+ V + AV+ ++
Sbjct 1 MWSTVLVMAVVAGVDPLRIGVVAYMLSRRHPMRLLLPFFAVAFGLNVAVGAAVVFVFKNT 60
Query 61 ALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIMLLLAARMVARARAQ-VGVPVGPVGV 119
+ Q + AA +GI G ++ ++ A+R+V R R + VP
Sbjct 61 SGDGGQAIAPAAE-----IGI--GVAALLLAALVATGTASRVVDRFRHRRATVPAAGSDR 113
Query 120 ADGGMSALALAQRPPGLVARLEVRTQQMLQGDVVWPAFVVGVASSAPPFESVVALTVIMA 179
A+ G +V++L + L+G+ W A ++G+++ P + A+ ++
Sbjct 114 AEPGEGPAPPPLDSLPIVSKLPESVKAALRGEAAWAAALLGLSNGFPTPYYLAAMAAVLT 173
Query 180 SGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTIL 239
SGA +G Q+ A V+F ++ A IP++++ P T+ + R +++++R + I
Sbjct 174 SGAAVGEQMAALVMFNVVGFAAALIPIISFWVAPVATRAAVERTYAAMKTHQRLVITVIA 233
Query 240 IGVGFLFLYQGVTSL 254
VG F+ GV+ L
Sbjct 234 GAVGVFFVGLGVSHL 248
>gi|169627859|ref|YP_001701508.1| hypothetical protein MAB_0758 [Mycobacterium abscessus ATCC 19977]
gi|169239826|emb|CAM60854.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=59
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/58 (32%), Positives = 33/58 (57%), Gaps = 0/58 (0%)
Query 197 LVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVGFLFLYQGVTSL 254
++ A + +P++AY+A + M R +DW+ N + ILI +G + LY G+ +L
Sbjct 1 MISASVAVPILAYVAAGHRLDDAMRRLKDWMDKNNAALMAAILIVIGVMVLYNGIHAL 58
>gi|240170027|ref|ZP_04748686.1| hypothetical protein MkanA1_11991 [Mycobacterium kansasii ATCC
12478]
Length=223
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/88 (28%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query 174 LTVIMASGAEIGTQL----GAFV---VFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDW 226
L + +A G IGT G ++ VF L + + P+V YL+ + + + R +DW
Sbjct 136 LIICLAGGLAIGTSALGVAGKWICAAVFVALAGSTVAFPIVGYLSAADRLDEPLTRLKDW 195
Query 227 VRSNRRQISLTILIGVGFLFLYQGVTSL 254
+ N + +L+ +G + LY G+ +L
Sbjct 196 MAKNHAAMLAVVLVLIGAMVLYNGIRAL 223
>gi|342859195|ref|ZP_08715849.1| hypothetical protein MCOL_09963 [Mycobacterium colombiense CECT
3035]
gi|342133436|gb|EGT86639.1| hypothetical protein MCOL_09963 [Mycobacterium colombiense CECT
3035]
Length=227
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/70 (28%), Positives = 36/70 (52%), Gaps = 0/70 (0%)
Query 185 GTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISLTILIGVGF 244
G Q A +F +L + + IP++AY+ + + R + W+ +N + IL +G
Sbjct 157 GAQAVAVAIFVVLAASTVAIPILAYVGAGDRFDDALERLKAWMDANHDAMMAVILFLIGL 216
Query 245 LFLYQGVTSL 254
+ LY G+ +L
Sbjct 217 IVLYNGIRTL 226
>gi|108797453|ref|YP_637650.1| hypothetical protein Mmcs_0473 [Mycobacterium sp. MCS]
gi|119866538|ref|YP_936490.1| hypothetical protein Mkms_0484 [Mycobacterium sp. KMS]
gi|126433072|ref|YP_001068763.1| hypothetical protein Mjls_0460 [Mycobacterium sp. JLS]
gi|108767872|gb|ABG06594.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692627|gb|ABL89700.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126232872|gb|ABN96272.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=221
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/87 (27%), Positives = 42/87 (49%), Gaps = 6/87 (6%)
Query 174 LTVIMASGAEIGTQ------LGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWV 227
L + +A+G IG+ A V F + + +P++AY + + R +DW+
Sbjct 135 LFICVAAGLAIGSAGLGNAVWAAVVYFAAIAGCSVAVPILAYAVSGGRLDDPLARLKDWM 194
Query 228 RSNRRQISLTILIGVGFLFLYQGVTSL 254
N + IL+ +G L LY+G+ +L
Sbjct 195 ERNHATLMAVILVVIGLLVLYKGIHTL 221
>gi|312198286|ref|YP_004018347.1| hypothetical protein FraEuI1c_4484 [Frankia sp. EuI1c]
gi|311229622|gb|ADP82477.1| Protein of unknown function DUF2910 [Frankia sp. EuI1c]
Length=238
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/98 (28%), Positives = 47/98 (48%), Gaps = 0/98 (0%)
Query 157 FVVGVASSAPPFESVVALTVIMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQT 216
F+VGV + P V AL + + G + A V LVL ++E+P++ L P++T
Sbjct 137 FLVGVTTYLPSALYVAALKKLADADLGWGVTIVALFVCASLVLLMVELPILLRLLAPRRT 196
Query 217 QQVMLRFQDWVRSNRRQISLTILIGVGFLFLYQGVTSL 254
++ + W+ + + L + G FL GV +L
Sbjct 197 GLILAAYNGWMNRHGWDVVLLLAAASGLYFLASGVVTL 234
>gi|145220856|ref|YP_001131534.1| hypothetical protein Mflv_0252 [Mycobacterium gilvum PYR-GCK]
gi|315442189|ref|YP_004075068.1| hypothetical protein Mspyr1_05240 [Mycobacterium sp. Spyr1]
gi|145213342|gb|ABP42746.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315260492|gb|ADT97233.1| hypothetical protein Mspyr1_05240 [Mycobacterium sp. Spyr1]
Length=225
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/78 (29%), Positives = 39/78 (50%), Gaps = 0/78 (0%)
Query 177 IMASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSNRRQISL 236
I +SG + T A + F L+ + + P+VAY ++ + R Q W+ +
Sbjct 146 IGSSGLDTPTVWAAVLWFVLVAASTVAAPIVAYAISGERLDPTLNRVQAWMERQHATLIA 205
Query 237 TILIGVGFLFLYQGVTSL 254
IL+ +G L LY+G+ +L
Sbjct 206 AILVVIGLLVLYKGIHAL 223
Lambda K H
0.329 0.142 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 371539772520
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40