BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1519
Length=89
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608657|ref|NP_216035.1| hypothetical protein Rv1519 [Mycoba... 175 2e-42
gi|167969331|ref|ZP_02551608.1| hypothetical protein MtubH3_1541... 117 4e-25
gi|323719966|gb|EGB29078.1| hypothetical protein TMMG_00779 [Myc... 109 1e-22
gi|15610538|ref|NP_217919.1| hypothetical protein Rv3402c [Mycob... 73.2 1e-11
gi|340628380|ref|YP_004746832.1| hypothetical protein MCAN_34261... 72.8 1e-11
gi|297733064|ref|ZP_06962182.1| hypothetical protein MtubKR_1833... 72.8 1e-11
gi|118574651|sp|Q7TWJ6.2|Y3436_MYCBO RecName: Full=Protein Mb3436c 72.8 1e-11
gi|289747230|ref|ZP_06506608.1| conserved hypothetical protein [... 72.8 1e-11
gi|313660395|ref|ZP_07817275.1| hypothetical protein MtubKV_1832... 72.8 1e-11
gi|289449100|ref|ZP_06438844.1| DegT/DnrJ/EryC1 family protein [... 72.4 2e-11
gi|124001473|dbj|BAF45364.1| putative Aminotransferase [Mycobact... 57.4 8e-07
gi|168479941|dbj|BAG11529.1| putative aminotransferase [Mycobact... 51.2 4e-05
gi|162147807|ref|YP_001602268.1| aminotransferase protein [Gluco... 38.5 0.31
gi|209542430|ref|YP_002274659.1| DegT/DnrJ/EryC1/StrS aminotrans... 38.5 0.32
gi|322382516|ref|ZP_08056401.1| aminotransferase-like protein [P... 38.1 0.42
gi|296533494|ref|ZP_06896069.1| pleiotropic regulatory protein D... 38.1 0.44
gi|323137642|ref|ZP_08072719.1| DegT/DnrJ/EryC1/StrS aminotransf... 38.1 0.46
gi|340788488|ref|YP_004753953.1| putative aminotransferase [Coll... 37.4 0.66
gi|332709957|ref|ZP_08429913.1| TDP-4-keto-6-deoxy-D-glucose tra... 35.8 2.2
gi|253996288|ref|YP_003048352.1| glutamine--scyllo-inositol tran... 35.4 2.9
gi|288922379|ref|ZP_06416570.1| DegT/DnrJ/EryC1/StrS aminotransf... 35.4 3.0
gi|89098355|ref|ZP_01171239.1| possible degT/dnrJ/eryC1/strS fam... 35.4 3.1
gi|339017929|ref|ZP_08644074.1| pleiotropic regulatory protein D... 35.0 3.6
gi|258541206|ref|YP_003186639.1| pleiotropic regulatory protein ... 35.0 3.6
gi|329114815|ref|ZP_08243572.1| Pleiotropic regulatory protein [... 35.0 3.6
gi|330993487|ref|ZP_08317422.1| Pleiotropic regulatory protein [... 35.0 3.8
gi|327400455|ref|YP_004341294.1| glutamine--scyllo-inositol tran... 34.7 4.6
gi|86738941|ref|YP_479341.1| DegT/DnrJ/EryC1/StrS aminotransfera... 34.7 5.4
gi|148260049|ref|YP_001234176.1| DegT/DnrJ/EryC1/StrS aminotrans... 34.3 6.5
gi|227494948|ref|ZP_03925264.1| pyridoxal-phosphate-dependent am... 33.9 8.5
gi|340778462|ref|ZP_08698405.1| pleiotropic regulatory protein D... 33.9 9.3
>gi|15608657|ref|NP_216035.1| hypothetical protein Rv1519 [Mycobacterium tuberculosis H37Rv]
gi|15840985|ref|NP_336022.1| hypothetical protein MT1569 [Mycobacterium tuberculosis CDC1551]
gi|31792705|ref|NP_855198.1| hypothetical protein Mb1546 [Mycobacterium bovis AF2122/97]
36 more sequence titles
Length=89
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/89 (99%), Positives = 89/89 (100%), Gaps = 0/89 (0%)
Query 1 LRCGCLACDGVLCANGPGRPRRPALTCTAVATRTLHSLATNAELVESADLTVTEDICSRI 60
+RCGCLACDGVLCANGPGRPRRPALTCTAVATRTLHSLATNAELVESADLTVTEDICSRI
Sbjct 1 MRCGCLACDGVLCANGPGRPRRPALTCTAVATRTLHSLATNAELVESADLTVTEDICSRI 60
Query 61 VSLPVHDHMAIADVARVVAPFGEGLARGG 89
VSLPVHDHMAIADVARVVAPFGEGLARGG
Sbjct 61 VSLPVHDHMAIADVARVVAPFGEGLARGG 89
>gi|167969331|ref|ZP_02551608.1| hypothetical protein MtubH3_15415 [Mycobacterium tuberculosis
H37Ra]
gi|254550539|ref|ZP_05140986.1| hypothetical protein Mtube_08772 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=60
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/60 (99%), Positives = 60/60 (100%), Gaps = 0/60 (0%)
Query 30 VATRTLHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARGG 89
+ATRTLHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARGG
Sbjct 1 MATRTLHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARGG 60
>gi|323719966|gb|EGB29078.1| hypothetical protein TMMG_00779 [Mycobacterium tuberculosis CDC1551A]
Length=55
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/55 (99%), Positives = 55/55 (100%), Gaps = 0/55 (0%)
Query 35 LHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARGG 89
+HSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARGG
Sbjct 1 MHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARGG 55
>gi|15610538|ref|NP_217919.1| hypothetical protein Rv3402c [Mycobacterium tuberculosis H37Rv]
gi|15842996|ref|NP_338033.1| hypothetical protein MT3510 [Mycobacterium tuberculosis CDC1551]
gi|148663266|ref|YP_001284789.1| hypothetical protein MRA_3442 [Mycobacterium tuberculosis H37Ra]
33 more sequence titles
Length=412
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/51 (75%), Positives = 38/51 (75%), Gaps = 0/51 (0%)
Query 38 LATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARG 88
TNAELVES DL VT DICSRIVSLPVHDHMA DVARVVA E RG
Sbjct 361 FVTNAELVESTDLAVTADICSRIVSLPVHDHMAPDDVARVVAAVQEAEVRG 411
>gi|340628380|ref|YP_004746832.1| hypothetical protein MCAN_34261 [Mycobacterium canettii CIPT
140010059]
gi|340006570|emb|CCC45757.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=412
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/51 (75%), Positives = 38/51 (75%), Gaps = 0/51 (0%)
Query 38 LATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARG 88
TNAELVES DL VT DICSRIVSLPVHDHMA DVARVVA E RG
Sbjct 361 FVTNAELVESTDLAVTADICSRIVSLPVHDHMAPDDVARVVAAVQEAEVRG 411
>gi|297733064|ref|ZP_06962182.1| hypothetical protein MtubKR_18330 [Mycobacterium tuberculosis
KZN R506]
gi|298526885|ref|ZP_07014294.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|308232452|ref|ZP_07416080.2| hypothetical protein TMAG_03350 [Mycobacterium tuberculosis SUMu001]
23 more sequence titles
Length=388
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/51 (75%), Positives = 38/51 (75%), Gaps = 0/51 (0%)
Query 38 LATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARG 88
TNAELVES DL VT DICSRIVSLPVHDHMA DVARVVA E RG
Sbjct 337 FVTNAELVESTDLAVTADICSRIVSLPVHDHMAPDDVARVVAAVQEAEVRG 387
>gi|118574651|sp|Q7TWJ6.2|Y3436_MYCBO RecName: Full=Protein Mb3436c
Length=412
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/51 (75%), Positives = 38/51 (75%), Gaps = 0/51 (0%)
Query 38 LATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARG 88
TNAELVES DL VT DICSRIVSLPVHDHMA DVARVVA E RG
Sbjct 361 FVTNAELVESTDLAVTADICSRIVSLPVHDHMAPDDVARVVAAVQEAEVRG 411
>gi|289747230|ref|ZP_06506608.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289759563|ref|ZP_06518941.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294995824|ref|ZP_06801515.1| hypothetical protein Mtub2_15298 [Mycobacterium tuberculosis
210]
gi|289687758|gb|EFD55246.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289715127|gb|EFD79139.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|326905246|gb|EGE52179.1| hypothetical protein TBPG_03186 [Mycobacterium tuberculosis W-148]
Length=412
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/51 (75%), Positives = 38/51 (75%), Gaps = 0/51 (0%)
Query 38 LATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARG 88
TNAELVES DL VT DICSRIVSLPVHDHMA DVARVVA E RG
Sbjct 361 FVTNAELVESTDLAVTADICSRIVSLPVHDHMAPDDVARVVAAVQEAEVRG 411
>gi|313660395|ref|ZP_07817275.1| hypothetical protein MtubKV_18325 [Mycobacterium tuberculosis
KZN V2475]
Length=403
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/51 (75%), Positives = 38/51 (75%), Gaps = 0/51 (0%)
Query 38 LATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARG 88
TNAELVES DL VT DICSRIVSLPVHDHMA DVARVVA E RG
Sbjct 352 FVTNAELVESTDLAVTADICSRIVSLPVHDHMAPDDVARVVAAVQEAEVRG 402
>gi|289449100|ref|ZP_06438844.1| DegT/DnrJ/EryC1 family protein [Mycobacterium tuberculosis CPHL_A]
gi|289422058|gb|EFD19259.1| DegT/DnrJ/EryC1 family protein [Mycobacterium tuberculosis CPHL_A]
Length=51
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/49 (78%), Positives = 38/49 (78%), Gaps = 0/49 (0%)
Query 40 TNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLARG 88
TNAELVES DL VT DICSRIVSLPVHDHMA DVARVVA E RG
Sbjct 2 TNAELVESTDLAVTADICSRIVSLPVHDHMAPDDVARVVAAVQEAEVRG 50
>gi|124001473|dbj|BAF45364.1| putative Aminotransferase [Mycobacterium intracellulare]
Length=375
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/45 (67%), Positives = 32/45 (72%), Gaps = 0/45 (0%)
Query 35 LHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVA 79
LH + + SADL TEDICSRIVSLPVHD MA DVARVVA
Sbjct 324 LHPYFVASPQLGSADLPATEDICSRIVSLPVHDDMAADDVARVVA 368
>gi|168479941|dbj|BAG11529.1| putative aminotransferase [Mycobacterium intracellulare]
Length=376
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 29/40 (73%), Gaps = 0/40 (0%)
Query 45 VESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEG 84
+ SADL T DICSRIVSLPVHD M+ DVAR+VA G
Sbjct 334 MRSADLPATVDICSRIVSLPVHDDMSSDDVARIVAAVQNG 373
>gi|162147807|ref|YP_001602268.1| aminotransferase protein [Gluconacetobacter diazotrophicus PAl
5]
gi|161786384|emb|CAP55966.1| putative aminotransferase protein [Gluconacetobacter diazotrophicus
PAl 5]
Length=380
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/30 (57%), Positives = 23/30 (77%), Gaps = 0/30 (0%)
Query 50 LTVTEDICSRIVSLPVHDHMAIADVARVVA 79
L V ED+ SRI++LP+H + ADVARV+A
Sbjct 347 LPVAEDLSSRILALPIHPELTDADVARVIA 376
>gi|209542430|ref|YP_002274659.1| DegT/DnrJ/EryC1/StrS aminotransferase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530107|gb|ACI50044.1| DegT/DnrJ/EryC1/StrS aminotransferase [Gluconacetobacter diazotrophicus
PAl 5]
Length=380
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/30 (57%), Positives = 23/30 (77%), Gaps = 0/30 (0%)
Query 50 LTVTEDICSRIVSLPVHDHMAIADVARVVA 79
L V ED+ SRI++LP+H + ADVARV+A
Sbjct 347 LPVAEDLSSRILALPIHPELTDADVARVIA 376
>gi|322382516|ref|ZP_08056401.1| aminotransferase-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153504|gb|EFX45903.1| aminotransferase-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length=151
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/35 (52%), Positives = 22/35 (63%), Gaps = 0/35 (0%)
Query 48 ADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFG 82
+DL VTE I RIVSLP+ + M A V R+V G
Sbjct 109 SDLQVTERIADRIVSLPLWEEMNKATVGRIVKVLG 143
>gi|296533494|ref|ZP_06896069.1| pleiotropic regulatory protein DegT [Roseomonas cervicalis ATCC
49957]
gi|296266169|gb|EFH12219.1| pleiotropic regulatory protein DegT [Roseomonas cervicalis ATCC
49957]
Length=386
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (74%), Gaps = 0/34 (0%)
Query 44 LVESADLTVTEDICSRIVSLPVHDHMAIADVARV 77
L ++ LTV+EDIC RI+SLP+H ++ A + RV
Sbjct 345 LRQAPPLTVSEDICQRILSLPMHPYLDEAQLDRV 378
>gi|323137642|ref|ZP_08072719.1| DegT/DnrJ/EryC1/StrS aminotransferase [Methylocystis sp. ATCC
49242]
gi|322397268|gb|EFX99792.1| DegT/DnrJ/EryC1/StrS aminotransferase [Methylocystis sp. ATCC
49242]
Length=390
Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/53 (42%), Positives = 34/53 (65%), Gaps = 1/53 (1%)
Query 35 LHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLAR 87
LH+ A + VE +L VTED+ R+V +PV ++ +DV+RVVA +G+ R
Sbjct 320 LHNHAYYKD-VERDELPVTEDLARRLVGVPVACDLSASDVSRVVAAIADGVRR 371
>gi|340788488|ref|YP_004753953.1| putative aminotransferase [Collimonas fungivorans Ter331]
gi|340553755|gb|AEK63130.1| putative aminotransferase [Collimonas fungivorans Ter331]
Length=386
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/43 (42%), Positives = 25/43 (59%), Gaps = 0/43 (0%)
Query 45 VESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGLAR 87
+++ L V ED+C+R V LP+H M AD RV+ LAR
Sbjct 329 MDNTGLQVAEDVCARHVCLPIHSDMTFADADRVITALAACLAR 371
>gi|332709957|ref|ZP_08429913.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Lyngbya majuscula
3L]
gi|332351328|gb|EGJ30912.1| TDP-4-keto-6-deoxy-D-glucose transaminase [Lyngbya majuscula
3L]
Length=380
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/34 (48%), Positives = 22/34 (65%), Gaps = 0/34 (0%)
Query 46 ESADLTVTEDICSRIVSLPVHDHMAIADVARVVA 79
+ D VTED+ R++ LP ++ M AD ARVVA
Sbjct 341 KEGDCLVTEDVSDRLLRLPFYNDMTEADQARVVA 374
>gi|253996288|ref|YP_003048352.1| glutamine--scyllo-inositol transaminase [Methylotenera mobilis
JLW8]
gi|253982967|gb|ACT47825.1| Glutamine--scyllo-inositol transaminase [Methylotenera mobilis
JLW8]
Length=374
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 15/40 (38%), Positives = 25/40 (63%), Gaps = 0/40 (0%)
Query 45 VESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEG 84
+++ L V E + +++SLP+ H+A ADV RV+A G
Sbjct 328 IKAGSLPVAERLAQQVLSLPIGPHLAAADVERVLAALASG 367
>gi|288922379|ref|ZP_06416570.1| DegT/DnrJ/EryC1/StrS aminotransferase [Frankia sp. EUN1f]
gi|288346286|gb|EFC80624.1| DegT/DnrJ/EryC1/StrS aminotransferase [Frankia sp. EUN1f]
Length=378
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/32 (57%), Positives = 21/32 (66%), Gaps = 0/32 (0%)
Query 50 LTVTEDICSRIVSLPVHDHMAIADVARVVAPF 81
L V EDIC+R V LP+H M A+V VVA F
Sbjct 333 LPVAEDICARHVCLPLHSDMTEAEVEHVVASF 364
>gi|89098355|ref|ZP_01171239.1| possible degT/dnrJ/eryC1/strS family protein [Bacillus sp. NRRL
B-14911]
gi|89086904|gb|EAR66021.1| possible degT/dnrJ/eryC1/strS family protein [Bacillus sp. NRRL
B-14911]
Length=378
Score = 35.4 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 21/64 (33%), Positives = 34/64 (54%), Gaps = 4/64 (6%)
Query 25 LTCTAVATRTLHSLATNAELVESA----DLTVTEDICSRIVSLPVHDHMAIADVARVVAP 80
L+ + RT S A + + + SA ++ VT+ + RI+SLP+ + M DV RV A
Sbjct 312 LSADGIEARTYFSPACHKQKLFSACKKSEMPVTDSLSDRILSLPLWEGMVKEDVERVAAS 371
Query 81 FGEG 84
+G
Sbjct 372 LSKG 375
>gi|339017929|ref|ZP_08644074.1| pleiotropic regulatory protein DegT/DnrJ/EryC1/StrS [Acetobacter
tropicalis NBRC 101654]
gi|338752932|dbj|GAA07378.1| pleiotropic regulatory protein DegT/DnrJ/EryC1/StrS [Acetobacter
tropicalis NBRC 101654]
Length=379
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/45 (32%), Positives = 28/45 (63%), Gaps = 0/45 (0%)
Query 35 LHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVA 79
LH + + + L V+ED+ +RI++LP+H + +V+R++A
Sbjct 331 LHKQPAYRDHHDGSSLPVSEDLATRILALPIHPELTDEEVSRIIA 375
>gi|258541206|ref|YP_003186639.1| pleiotropic regulatory protein DegT/DnrJ/EryC1/StrS [Acetobacter
pasteurianus IFO 3283-01]
gi|256632284|dbj|BAH98259.1| pleiotropic regulatory protein DegT/DnrJ/EryC1/StrS [Acetobacter
pasteurianus IFO 3283-01]
gi|256635341|dbj|BAI01310.1| pleiotropic regulatory protein DegT/DnrJ/EryC1/StrS [Acetobacter
pasteurianus IFO 3283-03]
6 more sequence titles
Length=378
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/30 (47%), Positives = 22/30 (74%), Gaps = 0/30 (0%)
Query 50 LTVTEDICSRIVSLPVHDHMAIADVARVVA 79
L V+ED+ RI++LP+H + +VARV+A
Sbjct 345 LPVSEDLAQRILALPIHPELTDEEVARVIA 374
>gi|329114815|ref|ZP_08243572.1| Pleiotropic regulatory protein [Acetobacter pomorum DM001]
gi|326695946|gb|EGE47630.1| Pleiotropic regulatory protein [Acetobacter pomorum DM001]
Length=378
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/30 (47%), Positives = 22/30 (74%), Gaps = 0/30 (0%)
Query 50 LTVTEDICSRIVSLPVHDHMAIADVARVVA 79
L V+ED+ RI++LP+H + +VARV+A
Sbjct 345 LPVSEDLAQRILALPIHPELTDEEVARVIA 374
>gi|330993487|ref|ZP_08317422.1| Pleiotropic regulatory protein [Gluconacetobacter sp. SXCC-1]
gi|329759517|gb|EGG76026.1| Pleiotropic regulatory protein [Gluconacetobacter sp. SXCC-1]
Length=375
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/47 (37%), Positives = 26/47 (56%), Gaps = 0/47 (0%)
Query 33 RTLHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVA 79
R LH + A L V ED+ RI++LP+H ++ DV R++A
Sbjct 324 RPLHQQPAYRASHDGAALPVAEDLSRRIMALPLHPELSDNDVGRIIA 370
>gi|327400455|ref|YP_004341294.1| glutamine--scyllo-inositol transaminase [Archaeoglobus veneficus
SNP6]
gi|327315963|gb|AEA46579.1| Glutamine--scyllo-inositol transaminase [Archaeoglobus veneficus
SNP6]
Length=371
Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 18/51 (36%), Positives = 27/51 (53%), Gaps = 0/51 (0%)
Query 35 LHSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGL 85
+H EL + L VTE IC+ I+SLP+H + ++ R+ GE L
Sbjct 313 MHRQKAYLELEYNTSLPVTEKICNEILSLPMHPWLREEEIRRISNCIGEFL 363
>gi|86738941|ref|YP_479341.1| DegT/DnrJ/EryC1/StrS aminotransferase [Frankia sp. CcI3]
gi|86565803|gb|ABD09612.1| DegT/DnrJ/EryC1/StrS aminotransferase [Frankia sp. CcI3]
Length=376
Score = 34.7 bits (78), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (59%), Gaps = 0/36 (0%)
Query 50 LTVTEDICSRIVSLPVHDHMAIADVARVVAPFGEGL 85
L V EDIC+R V LP+H M A+ VVA F L
Sbjct 334 LPVAEDICARHVCLPIHSDMTEAEADHVVASFAAAL 369
>gi|148260049|ref|YP_001234176.1| DegT/DnrJ/EryC1/StrS aminotransferase [Acidiphilium cryptum JF-5]
gi|146401730|gb|ABQ30257.1| DegT/DnrJ/EryC1/StrS aminotransferase [Acidiphilium cryptum JF-5]
Length=384
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/33 (46%), Positives = 24/33 (73%), Gaps = 0/33 (0%)
Query 46 ESADLTVTEDICSRIVSLPVHDHMAIADVARVV 78
+ A L V+ED+ +RI++LP+H + A VARV+
Sbjct 340 DGAALPVSEDVATRIMALPLHPDLDDAQVARVI 372
>gi|227494948|ref|ZP_03925264.1| pyridoxal-phosphate-dependent aminotransferase [Actinomyces coleocanis
DSM 15436]
gi|226831400|gb|EEH63783.1| pyridoxal-phosphate-dependent aminotransferase [Actinomyces coleocanis
DSM 15436]
Length=367
Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/43 (42%), Positives = 24/43 (56%), Gaps = 0/43 (0%)
Query 36 HSLATNAELVESADLTVTEDICSRIVSLPVHDHMAIADVARVV 78
H L + DL VTE ++VSLPVH ++ AD+ RVV
Sbjct 314 HRLPSLEHFAPGLDLPVTEVAAKQVVSLPVHPALSQADLERVV 356
>gi|340778462|ref|ZP_08698405.1| pleiotropic regulatory protein DegT/DnrJ/EryC1/StrS [Acetobacter
aceti NBRC 14818]
Length=379
Score = 33.9 bits (76), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 14/30 (47%), Positives = 22/30 (74%), Gaps = 0/30 (0%)
Query 50 LTVTEDICSRIVSLPVHDHMAIADVARVVA 79
L V+E + RI++LP+H + A+VARV+A
Sbjct 346 LPVSESLAQRILALPIHPELTDAEVARVIA 375
Lambda K H
0.324 0.137 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129638988780
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40