BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1528c
Length=165
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608666|ref|NP_216044.1| polyketide synthase associated prot... 334 3e-90
gi|340626549|ref|YP_004745001.1| putative polyketide synthase as... 330 5e-89
gi|167969342|ref|ZP_02551619.1| polyketide synthase associated p... 293 5e-78
gi|294996495|ref|ZP_06802186.1| polyketide synthase associated p... 238 3e-61
gi|183982356|ref|YP_001850647.1| hypothetical protein MMAR_2343 ... 97.8 5e-19
gi|240167910|ref|ZP_04746569.1| hypothetical protein MkanA1_0125... 90.9 6e-17
gi|240167924|ref|ZP_04746583.1| polyketide synthase associated p... 66.2 2e-09
gi|336460208|gb|EGO39112.1| putative polyketide synthase compone... 63.9 8e-09
gi|41409861|ref|NP_962697.1| PapA3_2 [Mycobacterium avium subsp.... 63.9 8e-09
gi|108800084|ref|YP_640281.1| condensation domain-containing pro... 63.2 1e-08
gi|119869210|ref|YP_939162.1| condensation domain-containing pro... 63.2 1e-08
gi|340628789|ref|YP_004747241.1| putative polyketide synthase as... 61.2 4e-08
gi|323717487|gb|EGB26690.1| polyketide synthase associated prote... 61.2 4e-08
gi|15843444|ref|NP_338481.1| hypothetical protein MT3928 [Mycoba... 61.2 5e-08
gi|289755953|ref|ZP_06515331.1| polyketide synthase associated p... 61.2 5e-08
gi|339296628|gb|AEJ48739.1| polyketide synthase associated prote... 60.8 6e-08
gi|289759987|ref|ZP_06519365.1| polyketide synthase associated p... 60.8 6e-08
gi|339300226|gb|AEJ52336.1| polyketide synthase associated prote... 60.8 7e-08
gi|289747662|ref|ZP_06507040.1| polyketide synthase associated p... 60.8 7e-08
gi|31794994|ref|NP_857487.1| polyketide synthase associated prot... 60.8 7e-08
gi|118617183|ref|YP_905515.1| polyketide synthase associated pro... 60.5 8e-08
gi|183982368|ref|YP_001850659.1| polyketide synthase associated ... 60.5 8e-08
gi|296166952|ref|ZP_06849368.1| acyltransferase papA2 [Mycobacte... 57.4 8e-07
gi|336458158|gb|EGO37141.1| putative polyketide synthase compone... 56.6 1e-06
gi|254775206|ref|ZP_05216722.1| PapA2 [Mycobacterium avium subsp... 55.8 2e-06
gi|41407792|ref|NP_960628.1| PapA2 [Mycobacterium avium subsp. p... 55.5 2e-06
gi|118464276|ref|YP_881912.1| PapA2 protein [Mycobacterium avium... 55.5 2e-06
gi|342857522|ref|ZP_08714178.1| PapA2 protein [Mycobacterium col... 55.5 3e-06
gi|254774723|ref|ZP_05216239.1| PapA2 protein [Mycobacterium avi... 55.5 3e-06
gi|169627951|ref|YP_001701600.1| polyketide synthase associated ... 55.1 4e-06
gi|15827628|ref|NP_301891.1| PKS-associated protein, unknown fun... 55.1 4e-06
gi|342860077|ref|ZP_08716729.1| putative polyketide synthase ass... 53.5 9e-06
gi|254821612|ref|ZP_05226613.1| PapA2 protein [Mycobacterium int... 53.5 1e-05
gi|118467292|ref|YP_881224.1| PapA2 protein [Mycobacterium avium... 53.5 1e-05
gi|118471167|ref|YP_888987.1| condensation domain-containing pro... 52.4 2e-05
gi|289555030|ref|ZP_06444240.1| polyketide synthase associated p... 52.0 3e-05
gi|289442615|ref|ZP_06432359.1| polyketide synthase associated p... 52.0 3e-05
gi|306781741|ref|ZP_07420078.1| polyketide synthase associated p... 52.0 3e-05
gi|15608322|ref|NP_215698.1| polyketide synthase associated prot... 52.0 3e-05
gi|342857528|ref|ZP_08714184.1| condensation domain-containing p... 48.9 3e-04
gi|118463607|ref|YP_880987.1| condensation domain-containing pro... 45.1 0.003
gi|41408329|ref|NP_961165.1| PapA3_1 [Mycobacterium avium subsp.... 43.9 0.008
gi|340626547|ref|YP_004744999.1| hypothetical protein MCAN_15491... 42.7 0.016
gi|254819859|ref|ZP_05224860.1| condensation domain-containing p... 42.7 0.019
gi|342859252|ref|ZP_08715906.1| hypothetical protein MCOL_10248 ... 40.0 0.12
gi|296170520|ref|ZP_06852106.1| acyltransferase papA1 [Mycobacte... 40.0 0.12
gi|169628035|ref|YP_001701684.1| polyketide synthase associated ... 39.3 0.17
gi|169630229|ref|YP_001703878.1| polyketide synthase associated ... 39.3 0.19
gi|340628793|ref|YP_004747245.1| putative polyketide synthase as... 38.9 0.28
gi|146760145|emb|CAJ77666.1| papA3 protein [Mycobacterium chelonae] 38.9 0.28
>gi|15608666|ref|NP_216044.1| polyketide synthase associated protein [Mycobacterium tuberculosis
H37Rv]
gi|15840995|ref|NP_336032.1| hypothetical protein MT1579 [Mycobacterium tuberculosis CDC1551]
gi|31792714|ref|NP_855207.1| polyketide synthase associated protein [Mycobacterium bovis AF2122/97]
68 more sequence titles
Length=165
Score = 334 bits (856), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/165 (99%), Positives = 165/165 (100%), Gaps = 0/165 (0%)
Query 1 VTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD 60
+TQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD
Sbjct 1 MTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD 60
Query 61 PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA 120
PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA
Sbjct 61 PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA 120
Query 121 LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP 165
LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP
Sbjct 121 LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP 165
>gi|340626549|ref|YP_004745001.1| putative polyketide synthase associated protein PAPA4 [Mycobacterium
canettii CIPT 140010059]
gi|340004739|emb|CCC43883.1| putative conserved polyketide synthase associated protein PAPA4
[Mycobacterium canettii CIPT 140010059]
Length=165
Score = 330 bits (845), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 162/165 (99%), Positives = 164/165 (99%), Gaps = 0/165 (0%)
Query 1 VTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD 60
+TQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD
Sbjct 1 MTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD 60
Query 61 PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA 120
PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA
Sbjct 61 PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA 120
Query 121 LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP 165
LSPSSPIAQGSIARHPET+QSAYVRIAEGGS DVAPAAQLQRRRP
Sbjct 121 LSPSSPIAQGSIARHPETIQSAYVRIAEGGSHDVAPAAQLQRRRP 165
>gi|167969342|ref|ZP_02551619.1| polyketide synthase associated protein papA4 [Mycobacterium tuberculosis
H37Ra]
gi|254550548|ref|ZP_05140995.1| polyketide synthase associated protein papA4 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|308374335|ref|ZP_07435661.2| polyketide synthase associated protein papA4 [Mycobacterium tuberculosis
SUMu006]
6 more sequence titles
Length=146
Score = 293 bits (751), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 145/146 (99%), Positives = 146/146 (100%), Gaps = 0/146 (0%)
Query 20 VQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLDPLGGGFRSRRASMPAGALL 79
+QSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLDPLGGGFRSRRASMPAGALL
Sbjct 1 MQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLDPLGGGFRSRRASMPAGALL 60
Query 80 LSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETM 139
LSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETM
Sbjct 61 LSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETM 120
Query 140 QSAYVRIAEGGSRDVAPAAQLQRRRP 165
QSAYVRIAEGGSRDVAPAAQLQRRRP
Sbjct 121 QSAYVRIAEGGSRDVAPAAQLQRRRP 146
>gi|294996495|ref|ZP_06802186.1| polyketide synthase associated protein papA4 [Mycobacterium tuberculosis
210]
Length=124
Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/115 (99%), Positives = 115/115 (100%), Gaps = 0/115 (0%)
Query 1 VTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD 60
+TQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD
Sbjct 1 MTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD 60
Query 61 PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEE 115
PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEE
Sbjct 61 PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEE 115
>gi|183982356|ref|YP_001850647.1| hypothetical protein MMAR_2343 [Mycobacterium marinum M]
gi|183175682|gb|ACC40792.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=478
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/93 (53%), Positives = 65/93 (70%), Gaps = 1/93 (1%)
Query 61 PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA 120
P GGF + + G LS V+A+QLDR+NAR F DG + A+ C+WVNKF EE+TVTA
Sbjct 381 PPRGGF-PMVSFLDGGVPPLSGVVAMQLDRINARAFSDGRVAARVCIWVNKFQEETTVTA 439
Query 121 LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRD 153
P++PIA S+AR+ +TM+S Y+RIAEG D
Sbjct 440 SFPNNPIAYDSVARYLDTMKSVYLRIAEGARWD 472
>gi|240167910|ref|ZP_04746569.1| hypothetical protein MkanA1_01250 [Mycobacterium kansasii ATCC
12478]
Length=488
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (52%), Positives = 58/91 (64%), Gaps = 0/91 (0%)
Query 61 PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA 120
PL G + + AG LSAV A + N RVF DG I A+ CMWVN+FHEE+TVTA
Sbjct 375 PLSRGCFPMLSFLDAGVPPLSAVFAPHIRTANTRVFSDGRIAARVCMWVNRFHEETTVTA 434
Query 121 LSPSSPIAQGSIARHPETMQSAYVRIAEGGS 151
P SPIA S+ R+ + M+S YVR+AEG S
Sbjct 435 SFPDSPIAHESVRRYLDAMKSVYVRVAEGRS 465
>gi|240167924|ref|ZP_04746583.1| polyketide synthase associated protein PapA3 [Mycobacterium kansasii
ATCC 12478]
Length=482
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 58/85 (69%), Gaps = 2/85 (2%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AG LSA+ ++ ++AR+ DG + Q + VN+F +E+ +T L P++PIA+ S+
Sbjct 368 LDAGIPPLSALANCHVEGLHARLCHDGGMMGQIDIRVNRFEKETQLTVLFPNNPIARESV 427
Query 133 ARHPETMQSAYVRIAEGGSRDVAPA 157
R+ ET+++AYVR+AEG R+V PA
Sbjct 428 TRYAETLKAAYVRVAEG--REVMPA 450
>gi|336460208|gb|EGO39112.1| putative polyketide synthase component [Mycobacterium avium subsp.
paratuberculosis S397]
Length=422
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/79 (40%), Positives = 48/79 (61%), Gaps = 0/79 (0%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AG LSA++ LD NAR++ DG I +Q + VN+ E+ V L P++PIA+ S+
Sbjct 302 LDAGVPPLSALVNSHLDGANARLYHDGRIPSQVAIRVNRLESETQVIVLFPNNPIARQSV 361
Query 133 ARHPETMQSAYVRIAEGGS 151
R+ M+S Y R+ +GG
Sbjct 362 TRYLAVMKSVYARVVDGGD 380
>gi|41409861|ref|NP_962697.1| PapA3_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398693|gb|AAS06313.1| PapA3_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length=506
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/79 (40%), Positives = 48/79 (61%), Gaps = 0/79 (0%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AG LSA++ LD NAR++ DG I +Q + VN+ E+ V L P++PIA+ S+
Sbjct 386 LDAGVPPLSALVNSHLDGANARLYHDGRIPSQVAIRVNRLESETQVIVLFPNNPIARQSV 445
Query 133 ARHPETMQSAYVRIAEGGS 151
R+ M+S Y R+ +GG
Sbjct 446 TRYLAVMKSVYARVVDGGD 464
>gi|108800084|ref|YP_640281.1| condensation domain-containing protein [Mycobacterium sp. MCS]
gi|108770503|gb|ABG09225.1| condensation domain protein [Mycobacterium sp. MCS]
Length=518
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/81 (40%), Positives = 48/81 (60%), Gaps = 0/81 (0%)
Query 71 ASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQG 130
+ + AG LS + Q + MN +V+ D Q MWVN+ E+TVT P +PIA+
Sbjct 414 SYLDAGLPPLSPSVIAQWEGMNGKVYSDARAAFQVGMWVNRTERETTVTVAFPDNPIARE 473
Query 131 SIARHPETMQSAYVRIAEGGS 151
SI R+ + M S Y+R+A+GG+
Sbjct 474 SITRYLQVMMSWYLRVADGGA 494
>gi|119869210|ref|YP_939162.1| condensation domain-containing protein [Mycobacterium sp. KMS]
gi|126435708|ref|YP_001071399.1| condensation domain-containing protein [Mycobacterium sp. JLS]
gi|119695299|gb|ABL92372.1| condensation domain protein [Mycobacterium sp. KMS]
gi|126235508|gb|ABN98908.1| condensation domain protein [Mycobacterium sp. JLS]
Length=488
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/81 (40%), Positives = 48/81 (60%), Gaps = 0/81 (0%)
Query 71 ASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQG 130
+ + AG LS + Q + MN +V+ D Q MWVN+ E+TVT P +PIA+
Sbjct 384 SYLDAGLPPLSPSVIAQWEGMNGKVYSDARAAFQVGMWVNRTERETTVTVAFPDNPIARE 443
Query 131 SIARHPETMQSAYVRIAEGGS 151
SI R+ + M S Y+R+A+GG+
Sbjct 444 SITRYLQVMMSWYLRVADGGA 464
>gi|340628789|ref|YP_004747241.1| putative polyketide synthase associated protein PAPA2 [Mycobacterium
canettii CIPT 140010059]
gi|340006979|emb|CCC46170.1| putative conserved polyketide synthase associated protein PAPA2
[Mycobacterium canettii CIPT 140010059]
Length=468
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/66 (38%), Positives = 41/66 (63%), Gaps = 0/66 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG 150
+N R++ +G + Q MWVN++ ++TVT L P +PIA S+A + M+S Y+R A+G
Sbjct 401 LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADGT 460
Query 151 SRDVAP 156
+ P
Sbjct 461 LATLKP 466
>gi|323717487|gb|EGB26690.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
CDC1551A]
Length=431
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/66 (38%), Positives = 41/66 (63%), Gaps = 0/66 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG 150
+N R++ +G + Q MWVN++ ++TVT L P +PIA S+A + M+S Y+R A+G
Sbjct 364 LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADGT 423
Query 151 SRDVAP 156
+ P
Sbjct 424 LATLKP 429
>gi|15843444|ref|NP_338481.1| hypothetical protein MT3928 [Mycobacterium tuberculosis CDC1551]
gi|57117162|ref|YP_178020.1| polyketide synthase associated protein PapA2 [Mycobacterium tuberculosis
H37Rv]
gi|148663688|ref|YP_001285211.1| putative polyketide synthase associated protein PapA2 [Mycobacterium
tuberculosis H37Ra]
60 more sequence titles
Length=468
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/66 (38%), Positives = 41/66 (63%), Gaps = 0/66 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG 150
+N R++ +G + Q MWVN++ ++TVT L P +PIA S+A + M+S Y+R A+G
Sbjct 401 LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADGT 460
Query 151 SRDVAP 156
+ P
Sbjct 461 LATLKP 466
>gi|289755953|ref|ZP_06515331.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
EAS054]
gi|289696540|gb|EFD63969.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
EAS054]
Length=468
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/66 (38%), Positives = 41/66 (63%), Gaps = 0/66 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG 150
+N R++ +G + Q MWVN++ ++TVT L P +PIA S+A + M+S Y+R A+G
Sbjct 401 LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADGT 460
Query 151 SRDVAP 156
+ P
Sbjct 461 LATLKP 466
>gi|339296628|gb|AEJ48739.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
CCDC5079]
Length=431
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG 149
+N R++ +G + Q MWVN++ ++TVT L P +PIA S+A + M+S Y+R A+G
Sbjct 364 LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG 422
>gi|289759987|ref|ZP_06519365.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
T85]
gi|289715551|gb|EFD79563.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
T85]
Length=468
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG 149
+N R++ +G + Q MWVN++ ++TVT L P +PIA S+A + M+S Y+R A+G
Sbjct 401 LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG 459
>gi|339300226|gb|AEJ52336.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
CCDC5180]
Length=404
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG 149
+N R++ +G + Q MWVN++ ++TVT L P +PIA S+A + M+S Y+R A+G
Sbjct 337 LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG 395
>gi|289747662|ref|ZP_06507040.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
02_1987]
gi|294995262|ref|ZP_06800953.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
210]
gi|298527295|ref|ZP_07014704.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
94_M4241A]
gi|289688190|gb|EFD55678.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
02_1987]
gi|298497089|gb|EFI32383.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
94_M4241A]
gi|326905657|gb|EGE52590.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis
W-148]
Length=468
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG 149
+N R++ +G + Q MWVN++ ++TVT L P +PIA S+A + M+S Y+R A+G
Sbjct 401 LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG 459
>gi|31794994|ref|NP_857487.1| polyketide synthase associated protein PapA2 [Mycobacterium bovis
AF2122/97]
gi|121639737|ref|YP_979961.1| putative polyketide synthase associated protein papA2 [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224992232|ref|YP_002646922.1| putative polyketide synthase associated protein [Mycobacterium
bovis BCG str. Tokyo 172]
6 more sequence titles
Length=468
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG 149
+N R++ +G + Q MWVN++ ++TVT L P +PIA S+A + M+S Y+R A+G
Sbjct 401 LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG 459
>gi|118617183|ref|YP_905515.1| polyketide synthase associated protein PapA3 [Mycobacterium ulcerans
Agy99]
gi|118569293|gb|ABL04044.1| conserved polyketide synthase associated protein PapA3 [Mycobacterium
ulcerans Agy99]
Length=502
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/85 (39%), Positives = 55/85 (65%), Gaps = 2/85 (2%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AG LSA+ ++ + AR+ DG + Q + VN+ +E+ +T L P++P+A+ S+
Sbjct 388 LDAGIPPLSAMANSHVEGLRARLCHDGGMMGQIDIRVNRLEKETQLTVLFPNNPVARESV 447
Query 133 ARHPETMQSAYVRIAEGGSRDVAPA 157
R+ E ++SA+VR+AEG RDV PA
Sbjct 448 TRYVEALKSAFVRVAEG--RDVMPA 470
>gi|183982368|ref|YP_001850659.1| polyketide synthase associated protein PapA3 [Mycobacterium marinum
M]
gi|183175694|gb|ACC40804.1| conserved polyketide synthase associated protein PapA3 [Mycobacterium
marinum M]
Length=502
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/85 (39%), Positives = 55/85 (65%), Gaps = 2/85 (2%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AG LSA+ ++ + AR+ DG + Q + VN+ +E+ +T L P++P+A+ S+
Sbjct 388 LDAGIPPLSAMANSHVEGLRARLCHDGGMMGQIDIRVNRLEKETQLTVLFPNNPVARESV 447
Query 133 ARHPETMQSAYVRIAEGGSRDVAPA 157
R+ E ++SA+VR+AEG RDV PA
Sbjct 448 TRYVEALKSAFVRVAEG--RDVMPA 470
>gi|296166952|ref|ZP_06849368.1| acyltransferase papA2 [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897691|gb|EFG77281.1| acyltransferase papA2 [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=476
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/62 (39%), Positives = 40/62 (65%), Gaps = 0/62 (0%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG 150
+N R++ +G + Q +WV + E+ VT L P +P+A+ S+ R+ + M+SAYVR A+G
Sbjct 401 LNFRIYDEGRVSHQVLLWVIRLQHETKVTVLFPDNPVARESVGRYIQAMRSAYVRAADGR 460
Query 151 SR 152
R
Sbjct 461 GR 462
>gi|336458158|gb|EGO37141.1| putative polyketide synthase component [Mycobacterium avium subsp.
paratuberculosis S397]
Length=463
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/65 (34%), Positives = 39/65 (60%), Gaps = 0/65 (0%)
Query 88 LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA 147
D + A V+GD + CMWVN+ H+ + + P + +A+GS+ R+ ETM++ + R+
Sbjct 396 FDGLRAGVWGDNRLSETVCMWVNRMHDRTQLVVAYPGTDVARGSVRRYVETMRAEFARVC 455
Query 148 EGGSR 152
+ G R
Sbjct 456 DAGPR 460
>gi|254775206|ref|ZP_05216722.1| PapA2 [Mycobacterium avium subsp. avium ATCC 25291]
gi|336457458|gb|EGO36467.1| putative polyketide synthase component [Mycobacterium avium subsp.
paratuberculosis S397]
Length=468
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (37%), Positives = 41/65 (64%), Gaps = 0/65 (0%)
Query 87 QLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRI 146
Q D +NA ++GDG Q MWVN+F E+T+T P +P+A+ S+ R+ +++ +R+
Sbjct 360 QWDGLNAGIYGDGRSSDQVLMWVNRFDTETTLTVAFPQNPVARDSVERYIRAVRAMCLRV 419
Query 147 AEGGS 151
E G+
Sbjct 420 VEHGA 424
>gi|41407792|ref|NP_960628.1| PapA2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396146|gb|AAS04011.1| PapA2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length=505
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (37%), Positives = 42/68 (62%), Gaps = 0/68 (0%)
Query 87 QLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRI 146
Q D +NA ++GDG Q MWVN+F E+T+T P +P+A+ S+ R+ +++ +R+
Sbjct 397 QWDGLNAGIYGDGRSSDQVLMWVNRFDTETTLTVAFPQNPVARDSVERYIRAVRAMCLRV 456
Query 147 AEGGSRDV 154
E G+ V
Sbjct 457 VEHGAAAV 464
>gi|118464276|ref|YP_881912.1| PapA2 protein [Mycobacterium avium 104]
gi|118165563|gb|ABK66460.1| PapA2 protein [Mycobacterium avium 104]
Length=468
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (37%), Positives = 41/65 (64%), Gaps = 0/65 (0%)
Query 87 QLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRI 146
Q D +NA ++GDG Q MWVN+F E+T+T P +P+A+ S+ R+ +++ +R+
Sbjct 360 QWDGLNAGIYGDGRSSDQVLMWVNRFDTETTLTVAFPQNPVARDSVERYIRAVRAMCLRV 419
Query 147 AEGGS 151
E G+
Sbjct 420 VEHGA 424
>gi|342857522|ref|ZP_08714178.1| PapA2 protein [Mycobacterium colombiense CECT 3035]
gi|342134855|gb|EGT88021.1| PapA2 protein [Mycobacterium colombiense CECT 3035]
Length=463
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/65 (33%), Positives = 40/65 (62%), Gaps = 0/65 (0%)
Query 88 LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA 147
D + A V+GD + CMWVN+ H+++ + P + +A+ S+ R+ ETM++ + R++
Sbjct 396 FDGLRAGVWGDNRLSETVCMWVNRMHDKTQLVVAYPGTDVARSSVLRYVETMRAEFTRVS 455
Query 148 EGGSR 152
+ G R
Sbjct 456 DAGLR 460
>gi|254774723|ref|ZP_05216239.1| PapA2 protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=386
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/63 (34%), Positives = 40/63 (64%), Gaps = 0/63 (0%)
Query 88 LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA 147
D + A V+GD + CMWVN+ H+++ + P + +A+ S++R+ ETM++ + R+A
Sbjct 319 FDGLRAGVWGDNRLSETVCMWVNRMHDKTQLVVAYPGTDVARRSVSRYVETMRAEFTRVA 378
Query 148 EGG 150
+ G
Sbjct 379 DAG 381
>gi|169627951|ref|YP_001701600.1| polyketide synthase associated protein PapA2 [Mycobacterium abscessus
ATCC 19977]
gi|169239918|emb|CAM60946.1| Possible conserved polyketide synthase associated protein PapA2
[Mycobacterium abscessus]
Length=463
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/65 (34%), Positives = 40/65 (62%), Gaps = 0/65 (0%)
Query 84 IAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAY 143
++ + DR+N ++GD Q CMWVN+F E+ +T P + +A+ S++R+ E + Y
Sbjct 394 VSAEWDRINGGIYGDSRSSDQVCMWVNRFENETNLTISFPDNAVARESVSRYFEVARVVY 453
Query 144 VRIAE 148
R+A+
Sbjct 454 QRVAQ 458
>gi|15827628|ref|NP_301891.1| PKS-associated protein, unknown function [Mycobacterium leprae
TN]
gi|221230105|ref|YP_002503521.1| PKS-associated protein, unknown function [Mycobacterium leprae
Br4923]
gi|466785|gb|AAA17061.1| sus [Mycobacterium leprae]
gi|13093179|emb|CAC31611.1| PKS-associated protein, unknown function [Mycobacterium leprae]
gi|219933212|emb|CAR71325.1| PKS-associated protein, unknown function [Mycobacterium leprae
Br4923]
Length=471
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (36%), Positives = 49/84 (59%), Gaps = 1/84 (1%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AG LS ++ LD +N V+ DG Q ++V + +E+ V + P +P AQ S+
Sbjct 388 LDAGTAPLSVLLTAGLDGLNIGVYSDGRYSYQMSIYVIRVEQETAVAVMFPDNPEAQESV 447
Query 133 ARHPETMQSAYVRIAEGGS-RDVA 155
AR+ ET++S + +AE G R+VA
Sbjct 448 ARYLETLKSVFECVAESGHWRNVA 471
>gi|342860077|ref|ZP_08716729.1| putative polyketide synthase associated protein PAPA2 [Mycobacterium
colombiense CECT 3035]
gi|342132455|gb|EGT85684.1| putative polyketide synthase associated protein PAPA2 [Mycobacterium
colombiense CECT 3035]
Length=412
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/67 (41%), Positives = 39/67 (59%), Gaps = 2/67 (2%)
Query 91 MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG- 149
+N R++ +G + Q MWV + +E+ VT L P +PIA SIA + M+S Y R+A
Sbjct 341 LNFRIYDEGRVSHQVSMWVTRLQQETKVTVLFPDNPIAGQSIAGYVAAMKSVYARVANCR 400
Query 150 -GSRDVA 155
GSR A
Sbjct 401 RGSRPFA 407
>gi|254821612|ref|ZP_05226613.1| PapA2 protein [Mycobacterium intracellulare ATCC 13950]
Length=386
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 40/63 (64%), Gaps = 0/63 (0%)
Query 88 LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA 147
D + A V+GD + CMWVN+ H+++ + P + +A+ S++R+ ET+++ + R+A
Sbjct 319 FDGLRAGVWGDNRLSETVCMWVNRMHDKTQLVVAYPGTDVARRSVSRYVETIRAEFTRVA 378
Query 148 EGG 150
+ G
Sbjct 379 DAG 381
>gi|118467292|ref|YP_881224.1| PapA2 protein [Mycobacterium avium 104]
gi|118168579|gb|ABK69476.1| PapA2 protein [Mycobacterium avium 104]
Length=463
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/65 (33%), Positives = 38/65 (59%), Gaps = 0/65 (0%)
Query 88 LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA 147
D + A V+G + CMWVN+ H+ + + P + +A+GS+ R+ ETM++ + R+
Sbjct 396 FDGLRAGVWGYNRLSETVCMWVNRMHDRTQLVVAYPGTDVARGSVRRYVETMRAEFARVC 455
Query 148 EGGSR 152
+ G R
Sbjct 456 DAGPR 460
>gi|118471167|ref|YP_888987.1| condensation domain-containing protein [Mycobacterium smegmatis
str. MC2 155]
gi|118172454|gb|ABK73350.1| condensation domain protein [Mycobacterium smegmatis str. MC2
155]
Length=480
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (31%), Positives = 46/84 (55%), Gaps = 0/84 (0%)
Query 71 ASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQG 130
+ + A A LS + + +R+N R+F + Q MWVN+F + +T P++P+A+
Sbjct 384 SYLDATAAPLSPAVVAEWNRINGRIFSEMGAANQVGMWVNQFGSGTWITVAFPNNPVARA 443
Query 131 SIARHPETMQSAYVRIAEGGSRDV 154
S+ + + +S V +AEG DV
Sbjct 444 SVQEYVDAFRSVCVAVAEGRHDDV 467
>gi|289555030|ref|ZP_06444240.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
KZN 605]
gi|289439662|gb|EFD22155.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
KZN 605]
Length=471
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (33%), Positives = 46/80 (58%), Gaps = 0/80 (0%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AGA LS ++ +L N V+ DG Q ++V + + + V + P +PIA+ S+
Sbjct 388 LDAGAAPLSVLLTAELTGTNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIARESV 447
Query 133 ARHPETMQSAYVRIAEGGSR 152
AR+ T++S + R+AE G +
Sbjct 448 ARYLATLKSVFQRVAESGQQ 467
>gi|289442615|ref|ZP_06432359.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
T46]
gi|289569186|ref|ZP_06449413.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
T17]
gi|289749724|ref|ZP_06509102.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
T92]
gi|289753251|ref|ZP_06512629.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
EAS054]
gi|289415534|gb|EFD12774.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
T46]
gi|289542940|gb|EFD46588.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
T17]
gi|289690311|gb|EFD57740.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
T92]
gi|289693838|gb|EFD61267.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
EAS054]
Length=472
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (33%), Positives = 46/80 (58%), Gaps = 0/80 (0%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AGA LS ++ +L N V+ DG Q ++V + + + V + P +PIA+ S+
Sbjct 389 LDAGAAPLSVLLTAELTGTNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIARESV 448
Query 133 ARHPETMQSAYVRIAEGGSR 152
AR+ T++S + R+AE G +
Sbjct 449 ARYLATLKSVFQRVAESGQQ 468
>gi|306781741|ref|ZP_07420078.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
SUMu002]
gi|306783900|ref|ZP_07422222.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
SUMu003]
gi|306788266|ref|ZP_07426588.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis
SUMu004]
13 more sequence titles
Length=472
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (33%), Positives = 46/80 (58%), Gaps = 0/80 (0%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AGA LS ++ +L N V+ DG Q ++V + + + V + P +PIA+ S+
Sbjct 389 LDAGAAPLSVLLTAELTGTNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIARESV 448
Query 133 ARHPETMQSAYVRIAEGGSR 152
AR+ T++S + R+AE G +
Sbjct 449 ARYLATLKSVFQRVAESGQQ 468
>gi|15608322|ref|NP_215698.1| polyketide synthase associated protein PapA3 [Mycobacterium tuberculosis
H37Rv]
gi|15840625|ref|NP_335662.1| hypothetical protein MT1219 [Mycobacterium tuberculosis CDC1551]
gi|31792375|ref|NP_854868.1| polyketide synthase associated protein PapA3 [Mycobacterium bovis
AF2122/97]
54 more sequence titles
Length=472
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (33%), Positives = 46/80 (58%), Gaps = 0/80 (0%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
+ AGA LS ++ +L N V+ DG Q ++V + + + V + P +PIA+ S+
Sbjct 389 LDAGAAPLSVLLTAELTGTNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIARESV 448
Query 133 ARHPETMQSAYVRIAEGGSR 152
AR+ T++S + R+AE G +
Sbjct 449 ARYLATLKSVFQRVAESGQQ 468
>gi|342857528|ref|ZP_08714184.1| condensation domain-containing protein [Mycobacterium colombiense
CECT 3035]
gi|342134861|gb|EGT88027.1| condensation domain-containing protein [Mycobacterium colombiense
CECT 3035]
Length=468
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (32%), Positives = 46/77 (60%), Gaps = 1/77 (1%)
Query 76 GALLLSAVIAIQLD-RMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIAR 134
GA L+AV+ +L N ++ DG Q +++ ++ E + + + P +PIAQ S+ R
Sbjct 391 GAAPLNAVLTAELGGAKNIGIYSDGRYSYQLTIYIFRYGEGTIMAVMHPDNPIAQKSVTR 450
Query 135 HPETMQSAYVRIAEGGS 151
+ E M+SA+ ++A+ G+
Sbjct 451 YVEAMKSAFTQVADRGN 467
>gi|118463607|ref|YP_880987.1| condensation domain-containing protein [Mycobacterium avium 104]
gi|254774578|ref|ZP_05216094.1| condensation domain-containing protein [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164894|gb|ABK65791.1| condensation domain protein [Mycobacterium avium 104]
Length=473
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (35%), Positives = 45/78 (58%), Gaps = 2/78 (2%)
Query 75 AGALLLSAVIAI-QLDRMNA-RVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
AGA L+AV+A L N ++ DG Q ++V ++ E + + + P +P+A S+
Sbjct 390 AGAAPLNAVLAAADLGYANNIGIYSDGRYSYQLTIYVFRYGEGTAMAMMYPDNPVAHKSV 449
Query 133 ARHPETMQSAYVRIAEGG 150
AR+ ETM+S R+A+ G
Sbjct 450 ARYTETMRSVCGRVADTG 467
>gi|41408329|ref|NP_961165.1| PapA3_1 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396685|gb|AAS04548.1| PapA3_1 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336458233|gb|EGO37214.1| putative polyketide synthase component [Mycobacterium avium subsp.
paratuberculosis S397]
Length=473
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (34%), Positives = 45/78 (58%), Gaps = 2/78 (2%)
Query 75 AGALLLSAVIAI-QLDRMNA-RVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
AGA L+AV+A L N ++ DG Q ++V ++ + + + + P +P+A S+
Sbjct 390 AGAAPLNAVLAAADLGYANNIGIYSDGRYSYQLTIYVFRYGDGTAMAMMYPDNPVAHKSV 449
Query 133 ARHPETMQSAYVRIAEGG 150
AR+ ETM+S R+A+ G
Sbjct 450 ARYTETMRSVCGRVADTG 467
>gi|340626547|ref|YP_004744999.1| hypothetical protein MCAN_15491 [Mycobacterium canettii CIPT
140010059]
gi|340004737|emb|CCC43881.1| putative uncharacterized protein [Mycobacterium canettii CIPT
140010059]
Length=481
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/88 (35%), Positives = 46/88 (53%), Gaps = 2/88 (2%)
Query 73 MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI 132
M AG LSAV+A L NA + D A M V + +E ++ P++PIA+ S
Sbjct 394 MDAGLPPLSAVVATALKGANAIAYNDARSPAYLYMSVIRLFDEVSLMIQFPNNPIARESA 453
Query 133 ARHPETMQSAYVRIAEGGSRDVAPAAQL 160
R+ E + S + R+A G + APA ++
Sbjct 454 TRYGEVISSIFSRVAAG--QYAAPAVRV 479
>gi|254819859|ref|ZP_05224860.1| condensation domain-containing protein [Mycobacterium intracellulare
ATCC 13950]
Length=473
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/78 (29%), Positives = 43/78 (56%), Gaps = 3/78 (3%)
Query 74 PAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIA 133
P A+L +A + + N ++ DG Q +++ ++ E + + + P +P+A+ S+
Sbjct 394 PLNAILAAADLGLA---NNIGIYPDGRYSHQLTIYIFRYGEGTVMAIMHPDNPVARKSVV 450
Query 134 RHPETMQSAYVRIAEGGS 151
R+ E M+S VR+A GS
Sbjct 451 RYMEAMKSVCVRVAGSGS 468
>gi|342859252|ref|ZP_08715906.1| hypothetical protein MCOL_10248 [Mycobacterium colombiense CECT
3035]
gi|342133493|gb|EGT86696.1| hypothetical protein MCOL_10248 [Mycobacterium colombiense CECT
3035]
Length=491
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/53 (36%), Positives = 30/53 (57%), Gaps = 0/53 (0%)
Query 95 VFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA 147
+GD MW+N+ E +TVT P + IA+ S+ R+ T+ A+VR+A
Sbjct 407 TYGDSLSHGGINMWINRQAENTTVTMSFPDNAIARESVLRYIATLTQAFVRVA 459
>gi|296170520|ref|ZP_06852106.1| acyltransferase papA1 [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894832|gb|EFG74555.1| acyltransferase papA1 [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=473
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/56 (29%), Positives = 34/56 (61%), Gaps = 0/56 (0%)
Query 95 VFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG 150
++ DG Q ++V ++ E + + + P++ +AQ S++R+ M+S VR+A+ G
Sbjct 412 IYSDGRYSYQLTIYVFRYEEGTAMAVMYPANAVAQKSVSRYLAAMKSVCVRVADTG 467
>gi|169628035|ref|YP_001701684.1| polyketide synthase associated protein PapA3 [Mycobacterium abscessus
ATCC 19977]
gi|146760178|emb|CAJ77675.1| PapA3 protein [Mycobacterium abscessus]
gi|169240002|emb|CAM61030.1| Probable conserved polyketide synthase associated protein PapA3
[Mycobacterium abscessus]
Length=486
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/59 (29%), Positives = 33/59 (56%), Gaps = 0/59 (0%)
Query 92 NARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG 150
N ++ DG Q +++ ++ E + + + P +PIA+ S R+ E M+S R+A+ G
Sbjct 422 NIGIYPDGRFSYQLTIYIFRYGEGTAMAIMHPDNPIAEKSALRYMEAMKSVCARVADTG 480
>gi|169630229|ref|YP_001703878.1| polyketide synthase associated protein [Mycobacterium abscessus
ATCC 19977]
gi|169242196|emb|CAM63224.1| Probable conserved polyketide synthase associated protein [Mycobacterium
abscessus]
Length=471
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/54 (32%), Positives = 33/54 (62%), Gaps = 2/54 (3%)
Query 104 QACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPA 157
Q +++++F E+T+ P +P+A+ SI R+ + ++S + R+ E DV PA
Sbjct 419 QLTIFISRFPTETTLMIAYPDNPVARESITRYVDLVKSTFARVCE--QNDVVPA 470
>gi|340628793|ref|YP_004747245.1| putative polyketide synthase associated protein PAPA1 [Mycobacterium
canettii CIPT 140010059]
gi|340006983|emb|CCC46174.1| putative conserved polyketide synthase associated protein PAPA1
[Mycobacterium canettii CIPT 140010059]
Length=511
Score = 38.9 bits (89), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/72 (31%), Positives = 40/72 (56%), Gaps = 2/72 (2%)
Query 80 LSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETM 139
LSAV + + +N + DG + V +F +E+ + L P +P+A+ S+A + +
Sbjct 394 LSAVTKL-FEGLNVGTYSDGRVTYPLSTMVGRF-DETAASVLFPDNPVARESVAAYLRAI 451
Query 140 QSAYVRIAEGGS 151
+S +RIA GG+
Sbjct 452 RSVCMRIANGGT 463
>gi|146760145|emb|CAJ77666.1| papA3 protein [Mycobacterium chelonae]
Length=513
Score = 38.9 bits (89), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/77 (29%), Positives = 42/77 (55%), Gaps = 2/77 (2%)
Query 76 GALLLSAVIAIQLDRM--NARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIA 133
GA L+A++A + N ++ DG Q +++ ++ E + + + P +PIA+ S
Sbjct 431 GAAPLNAILAAGELGLADNIGIYPDGRFSYQLTIYIFRYGEGTAMAIMHPDNPIAEKSAL 490
Query 134 RHPETMQSAYVRIAEGG 150
R+ E M+S R+A+ G
Sbjct 491 RYMEAMKSVCGRVADSG 507
Lambda K H
0.318 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128736477480
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40