BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1528c

Length=165
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608666|ref|NP_216044.1|  polyketide synthase associated prot...   334    3e-90
gi|340626549|ref|YP_004745001.1|  putative polyketide synthase as...   330    5e-89
gi|167969342|ref|ZP_02551619.1|  polyketide synthase associated p...   293    5e-78
gi|294996495|ref|ZP_06802186.1|  polyketide synthase associated p...   238    3e-61
gi|183982356|ref|YP_001850647.1|  hypothetical protein MMAR_2343 ...  97.8    5e-19
gi|240167910|ref|ZP_04746569.1|  hypothetical protein MkanA1_0125...  90.9    6e-17
gi|240167924|ref|ZP_04746583.1|  polyketide synthase associated p...  66.2    2e-09
gi|336460208|gb|EGO39112.1|  putative polyketide synthase compone...  63.9    8e-09
gi|41409861|ref|NP_962697.1|  PapA3_2 [Mycobacterium avium subsp....  63.9    8e-09
gi|108800084|ref|YP_640281.1|  condensation domain-containing pro...  63.2    1e-08
gi|119869210|ref|YP_939162.1|  condensation domain-containing pro...  63.2    1e-08
gi|340628789|ref|YP_004747241.1|  putative polyketide synthase as...  61.2    4e-08
gi|323717487|gb|EGB26690.1|  polyketide synthase associated prote...  61.2    4e-08
gi|15843444|ref|NP_338481.1|  hypothetical protein MT3928 [Mycoba...  61.2    5e-08
gi|289755953|ref|ZP_06515331.1|  polyketide synthase associated p...  61.2    5e-08
gi|339296628|gb|AEJ48739.1|  polyketide synthase associated prote...  60.8    6e-08
gi|289759987|ref|ZP_06519365.1|  polyketide synthase associated p...  60.8    6e-08
gi|339300226|gb|AEJ52336.1|  polyketide synthase associated prote...  60.8    7e-08
gi|289747662|ref|ZP_06507040.1|  polyketide synthase associated p...  60.8    7e-08
gi|31794994|ref|NP_857487.1|  polyketide synthase associated prot...  60.8    7e-08
gi|118617183|ref|YP_905515.1|  polyketide synthase associated pro...  60.5    8e-08
gi|183982368|ref|YP_001850659.1|  polyketide synthase associated ...  60.5    8e-08
gi|296166952|ref|ZP_06849368.1|  acyltransferase papA2 [Mycobacte...  57.4    8e-07
gi|336458158|gb|EGO37141.1|  putative polyketide synthase compone...  56.6    1e-06
gi|254775206|ref|ZP_05216722.1|  PapA2 [Mycobacterium avium subsp...  55.8    2e-06
gi|41407792|ref|NP_960628.1|  PapA2 [Mycobacterium avium subsp. p...  55.5    2e-06
gi|118464276|ref|YP_881912.1|  PapA2 protein [Mycobacterium avium...  55.5    2e-06
gi|342857522|ref|ZP_08714178.1|  PapA2 protein [Mycobacterium col...  55.5    3e-06
gi|254774723|ref|ZP_05216239.1|  PapA2 protein [Mycobacterium avi...  55.5    3e-06
gi|169627951|ref|YP_001701600.1|  polyketide synthase associated ...  55.1    4e-06
gi|15827628|ref|NP_301891.1|  PKS-associated protein, unknown fun...  55.1    4e-06
gi|342860077|ref|ZP_08716729.1|  putative polyketide synthase ass...  53.5    9e-06
gi|254821612|ref|ZP_05226613.1|  PapA2 protein [Mycobacterium int...  53.5    1e-05
gi|118467292|ref|YP_881224.1|  PapA2 protein [Mycobacterium avium...  53.5    1e-05
gi|118471167|ref|YP_888987.1|  condensation domain-containing pro...  52.4    2e-05
gi|289555030|ref|ZP_06444240.1|  polyketide synthase associated p...  52.0    3e-05
gi|289442615|ref|ZP_06432359.1|  polyketide synthase associated p...  52.0    3e-05
gi|306781741|ref|ZP_07420078.1|  polyketide synthase associated p...  52.0    3e-05
gi|15608322|ref|NP_215698.1|  polyketide synthase associated prot...  52.0    3e-05
gi|342857528|ref|ZP_08714184.1|  condensation domain-containing p...  48.9    3e-04
gi|118463607|ref|YP_880987.1|  condensation domain-containing pro...  45.1    0.003
gi|41408329|ref|NP_961165.1|  PapA3_1 [Mycobacterium avium subsp....  43.9    0.008
gi|340626547|ref|YP_004744999.1|  hypothetical protein MCAN_15491...  42.7    0.016
gi|254819859|ref|ZP_05224860.1|  condensation domain-containing p...  42.7    0.019
gi|342859252|ref|ZP_08715906.1|  hypothetical protein MCOL_10248 ...  40.0    0.12 
gi|296170520|ref|ZP_06852106.1|  acyltransferase papA1 [Mycobacte...  40.0    0.12 
gi|169628035|ref|YP_001701684.1|  polyketide synthase associated ...  39.3    0.17 
gi|169630229|ref|YP_001703878.1|  polyketide synthase associated ...  39.3    0.19 
gi|340628793|ref|YP_004747245.1|  putative polyketide synthase as...  38.9    0.28 
gi|146760145|emb|CAJ77666.1|  papA3 protein [Mycobacterium chelonae]  38.9    0.28 


>gi|15608666|ref|NP_216044.1| polyketide synthase associated protein [Mycobacterium tuberculosis 
H37Rv]
 gi|15840995|ref|NP_336032.1| hypothetical protein MT1579 [Mycobacterium tuberculosis CDC1551]
 gi|31792714|ref|NP_855207.1| polyketide synthase associated protein [Mycobacterium bovis AF2122/97]
 68 more sequence titles
 Length=165

 Score =  334 bits (856),  Expect = 3e-90, Method: Compositional matrix adjust.
 Identities = 164/165 (99%), Positives = 165/165 (100%), Gaps = 0/165 (0%)

Query  1    VTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD  60
            +TQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD
Sbjct  1    MTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD  60

Query  61   PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA  120
            PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA
Sbjct  61   PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA  120

Query  121  LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP  165
            LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP
Sbjct  121  LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP  165


>gi|340626549|ref|YP_004745001.1| putative polyketide synthase associated protein PAPA4 [Mycobacterium 
canettii CIPT 140010059]
 gi|340004739|emb|CCC43883.1| putative conserved polyketide synthase associated protein PAPA4 
[Mycobacterium canettii CIPT 140010059]
Length=165

 Score =  330 bits (845),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 162/165 (99%), Positives = 164/165 (99%), Gaps = 0/165 (0%)

Query  1    VTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD  60
            +TQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD
Sbjct  1    MTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD  60

Query  61   PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA  120
            PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA
Sbjct  61   PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA  120

Query  121  LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP  165
            LSPSSPIAQGSIARHPET+QSAYVRIAEGGS DVAPAAQLQRRRP
Sbjct  121  LSPSSPIAQGSIARHPETIQSAYVRIAEGGSHDVAPAAQLQRRRP  165


>gi|167969342|ref|ZP_02551619.1| polyketide synthase associated protein papA4 [Mycobacterium tuberculosis 
H37Ra]
 gi|254550548|ref|ZP_05140995.1| polyketide synthase associated protein papA4 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|308374335|ref|ZP_07435661.2| polyketide synthase associated protein papA4 [Mycobacterium tuberculosis 
SUMu006]
 6 more sequence titles
 Length=146

 Score =  293 bits (751),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 145/146 (99%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  20   VQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLDPLGGGFRSRRASMPAGALL  79
            +QSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLDPLGGGFRSRRASMPAGALL
Sbjct  1    MQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLDPLGGGFRSRRASMPAGALL  60

Query  80   LSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETM  139
            LSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETM
Sbjct  61   LSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETM  120

Query  140  QSAYVRIAEGGSRDVAPAAQLQRRRP  165
            QSAYVRIAEGGSRDVAPAAQLQRRRP
Sbjct  121  QSAYVRIAEGGSRDVAPAAQLQRRRP  146


>gi|294996495|ref|ZP_06802186.1| polyketide synthase associated protein papA4 [Mycobacterium tuberculosis 
210]
Length=124

 Score =  238 bits (606),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 114/115 (99%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  1    VTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD  60
            +TQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD
Sbjct  1    MTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD  60

Query  61   PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEE  115
            PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEE
Sbjct  61   PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEE  115


>gi|183982356|ref|YP_001850647.1| hypothetical protein MMAR_2343 [Mycobacterium marinum M]
 gi|183175682|gb|ACC40792.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=478

 Score = 97.8 bits (242),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 49/93 (53%), Positives = 65/93 (70%), Gaps = 1/93 (1%)

Query  61   PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA  120
            P  GGF    + +  G   LS V+A+QLDR+NAR F DG + A+ C+WVNKF EE+TVTA
Sbjct  381  PPRGGF-PMVSFLDGGVPPLSGVVAMQLDRINARAFSDGRVAARVCIWVNKFQEETTVTA  439

Query  121  LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRD  153
              P++PIA  S+AR+ +TM+S Y+RIAEG   D
Sbjct  440  SFPNNPIAYDSVARYLDTMKSVYLRIAEGARWD  472


>gi|240167910|ref|ZP_04746569.1| hypothetical protein MkanA1_01250 [Mycobacterium kansasii ATCC 
12478]
Length=488

 Score = 90.9 bits (224),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 47/91 (52%), Positives = 58/91 (64%), Gaps = 0/91 (0%)

Query  61   PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA  120
            PL  G     + + AG   LSAV A  +   N RVF DG I A+ CMWVN+FHEE+TVTA
Sbjct  375  PLSRGCFPMLSFLDAGVPPLSAVFAPHIRTANTRVFSDGRIAARVCMWVNRFHEETTVTA  434

Query  121  LSPSSPIAQGSIARHPETMQSAYVRIAEGGS  151
              P SPIA  S+ R+ + M+S YVR+AEG S
Sbjct  435  SFPDSPIAHESVRRYLDAMKSVYVRVAEGRS  465


>gi|240167924|ref|ZP_04746583.1| polyketide synthase associated protein PapA3 [Mycobacterium kansasii 
ATCC 12478]
Length=482

 Score = 66.2 bits (160),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 35/85 (42%), Positives = 58/85 (69%), Gaps = 2/85 (2%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AG   LSA+    ++ ++AR+  DG +  Q  + VN+F +E+ +T L P++PIA+ S+
Sbjct  368  LDAGIPPLSALANCHVEGLHARLCHDGGMMGQIDIRVNRFEKETQLTVLFPNNPIARESV  427

Query  133  ARHPETMQSAYVRIAEGGSRDVAPA  157
             R+ ET+++AYVR+AEG  R+V PA
Sbjct  428  TRYAETLKAAYVRVAEG--REVMPA  450


>gi|336460208|gb|EGO39112.1| putative polyketide synthase component [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=422

 Score = 63.9 bits (154),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 31/79 (40%), Positives = 48/79 (61%), Gaps = 0/79 (0%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AG   LSA++   LD  NAR++ DG I +Q  + VN+   E+ V  L P++PIA+ S+
Sbjct  302  LDAGVPPLSALVNSHLDGANARLYHDGRIPSQVAIRVNRLESETQVIVLFPNNPIARQSV  361

Query  133  ARHPETMQSAYVRIAEGGS  151
             R+   M+S Y R+ +GG 
Sbjct  362  TRYLAVMKSVYARVVDGGD  380


>gi|41409861|ref|NP_962697.1| PapA3_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398693|gb|AAS06313.1| PapA3_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length=506

 Score = 63.9 bits (154),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 31/79 (40%), Positives = 48/79 (61%), Gaps = 0/79 (0%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AG   LSA++   LD  NAR++ DG I +Q  + VN+   E+ V  L P++PIA+ S+
Sbjct  386  LDAGVPPLSALVNSHLDGANARLYHDGRIPSQVAIRVNRLESETQVIVLFPNNPIARQSV  445

Query  133  ARHPETMQSAYVRIAEGGS  151
             R+   M+S Y R+ +GG 
Sbjct  446  TRYLAVMKSVYARVVDGGD  464


>gi|108800084|ref|YP_640281.1| condensation domain-containing protein [Mycobacterium sp. MCS]
 gi|108770503|gb|ABG09225.1| condensation domain protein [Mycobacterium sp. MCS]
Length=518

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 32/81 (40%), Positives = 48/81 (60%), Gaps = 0/81 (0%)

Query  71   ASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQG  130
            + + AG   LS  +  Q + MN +V+ D     Q  MWVN+   E+TVT   P +PIA+ 
Sbjct  414  SYLDAGLPPLSPSVIAQWEGMNGKVYSDARAAFQVGMWVNRTERETTVTVAFPDNPIARE  473

Query  131  SIARHPETMQSAYVRIAEGGS  151
            SI R+ + M S Y+R+A+GG+
Sbjct  474  SITRYLQVMMSWYLRVADGGA  494


>gi|119869210|ref|YP_939162.1| condensation domain-containing protein [Mycobacterium sp. KMS]
 gi|126435708|ref|YP_001071399.1| condensation domain-containing protein [Mycobacterium sp. JLS]
 gi|119695299|gb|ABL92372.1| condensation domain protein [Mycobacterium sp. KMS]
 gi|126235508|gb|ABN98908.1| condensation domain protein [Mycobacterium sp. JLS]
Length=488

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 32/81 (40%), Positives = 48/81 (60%), Gaps = 0/81 (0%)

Query  71   ASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQG  130
            + + AG   LS  +  Q + MN +V+ D     Q  MWVN+   E+TVT   P +PIA+ 
Sbjct  384  SYLDAGLPPLSPSVIAQWEGMNGKVYSDARAAFQVGMWVNRTERETTVTVAFPDNPIARE  443

Query  131  SIARHPETMQSAYVRIAEGGS  151
            SI R+ + M S Y+R+A+GG+
Sbjct  444  SITRYLQVMMSWYLRVADGGA  464


>gi|340628789|ref|YP_004747241.1| putative polyketide synthase associated protein PAPA2 [Mycobacterium 
canettii CIPT 140010059]
 gi|340006979|emb|CCC46170.1| putative conserved polyketide synthase associated protein PAPA2 
[Mycobacterium canettii CIPT 140010059]
Length=468

 Score = 61.2 bits (147),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 25/66 (38%), Positives = 41/66 (63%), Gaps = 0/66 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG  150
            +N R++ +G +  Q  MWVN++  ++TVT L P +PIA  S+A +   M+S Y+R A+G 
Sbjct  401  LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADGT  460

Query  151  SRDVAP  156
               + P
Sbjct  461  LATLKP  466


>gi|323717487|gb|EGB26690.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
CDC1551A]
Length=431

 Score = 61.2 bits (147),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 25/66 (38%), Positives = 41/66 (63%), Gaps = 0/66 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG  150
            +N R++ +G +  Q  MWVN++  ++TVT L P +PIA  S+A +   M+S Y+R A+G 
Sbjct  364  LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADGT  423

Query  151  SRDVAP  156
               + P
Sbjct  424  LATLKP  429


>gi|15843444|ref|NP_338481.1| hypothetical protein MT3928 [Mycobacterium tuberculosis CDC1551]
 gi|57117162|ref|YP_178020.1| polyketide synthase associated protein PapA2 [Mycobacterium tuberculosis 
H37Rv]
 gi|148663688|ref|YP_001285211.1| putative polyketide synthase associated protein PapA2 [Mycobacterium 
tuberculosis H37Ra]
 60 more sequence titles
 Length=468

 Score = 61.2 bits (147),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 25/66 (38%), Positives = 41/66 (63%), Gaps = 0/66 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG  150
            +N R++ +G +  Q  MWVN++  ++TVT L P +PIA  S+A +   M+S Y+R A+G 
Sbjct  401  LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADGT  460

Query  151  SRDVAP  156
               + P
Sbjct  461  LATLKP  466


>gi|289755953|ref|ZP_06515331.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
EAS054]
 gi|289696540|gb|EFD63969.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
EAS054]
Length=468

 Score = 61.2 bits (147),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 25/66 (38%), Positives = 41/66 (63%), Gaps = 0/66 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG  150
            +N R++ +G +  Q  MWVN++  ++TVT L P +PIA  S+A +   M+S Y+R A+G 
Sbjct  401  LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADGT  460

Query  151  SRDVAP  156
               + P
Sbjct  461  LATLKP  466


>gi|339296628|gb|AEJ48739.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
CCDC5079]
Length=431

 Score = 60.8 bits (146),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG  149
            +N R++ +G +  Q  MWVN++  ++TVT L P +PIA  S+A +   M+S Y+R A+G
Sbjct  364  LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG  422


>gi|289759987|ref|ZP_06519365.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
T85]
 gi|289715551|gb|EFD79563.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
T85]
Length=468

 Score = 60.8 bits (146),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG  149
            +N R++ +G +  Q  MWVN++  ++TVT L P +PIA  S+A +   M+S Y+R A+G
Sbjct  401  LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG  459


>gi|339300226|gb|AEJ52336.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
CCDC5180]
Length=404

 Score = 60.8 bits (146),  Expect = 7e-08, Method: Compositional matrix adjust.
 Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG  149
            +N R++ +G +  Q  MWVN++  ++TVT L P +PIA  S+A +   M+S Y+R A+G
Sbjct  337  LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG  395


>gi|289747662|ref|ZP_06507040.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
02_1987]
 gi|294995262|ref|ZP_06800953.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
210]
 gi|298527295|ref|ZP_07014704.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
94_M4241A]
 gi|289688190|gb|EFD55678.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
02_1987]
 gi|298497089|gb|EFI32383.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
94_M4241A]
 gi|326905657|gb|EGE52590.1| polyketide synthase associated protein papA2 [Mycobacterium tuberculosis 
W-148]
Length=468

 Score = 60.8 bits (146),  Expect = 7e-08, Method: Compositional matrix adjust.
 Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG  149
            +N R++ +G +  Q  MWVN++  ++TVT L P +PIA  S+A +   M+S Y+R A+G
Sbjct  401  LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG  459


>gi|31794994|ref|NP_857487.1| polyketide synthase associated protein PapA2 [Mycobacterium bovis 
AF2122/97]
 gi|121639737|ref|YP_979961.1| putative polyketide synthase associated protein papA2 [Mycobacterium 
bovis BCG str. Pasteur 1173P2]
 gi|224992232|ref|YP_002646922.1| putative polyketide synthase associated protein [Mycobacterium 
bovis BCG str. Tokyo 172]
 6 more sequence titles
 Length=468

 Score = 60.8 bits (146),  Expect = 7e-08, Method: Compositional matrix adjust.
 Identities = 24/59 (41%), Positives = 39/59 (67%), Gaps = 0/59 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG  149
            +N R++ +G +  Q  MWVN++  ++TVT L P +PIA  S+A +   M+S Y+R A+G
Sbjct  401  LNFRIYDEGRVSHQVSMWVNRYQHQTTVTVLFPDNPIASESVANYIAAMKSIYIRTADG  459


>gi|118617183|ref|YP_905515.1| polyketide synthase associated protein PapA3 [Mycobacterium ulcerans 
Agy99]
 gi|118569293|gb|ABL04044.1| conserved polyketide synthase associated protein PapA3 [Mycobacterium 
ulcerans Agy99]
Length=502

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 33/85 (39%), Positives = 55/85 (65%), Gaps = 2/85 (2%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AG   LSA+    ++ + AR+  DG +  Q  + VN+  +E+ +T L P++P+A+ S+
Sbjct  388  LDAGIPPLSAMANSHVEGLRARLCHDGGMMGQIDIRVNRLEKETQLTVLFPNNPVARESV  447

Query  133  ARHPETMQSAYVRIAEGGSRDVAPA  157
             R+ E ++SA+VR+AEG  RDV PA
Sbjct  448  TRYVEALKSAFVRVAEG--RDVMPA  470


>gi|183982368|ref|YP_001850659.1| polyketide synthase associated protein PapA3 [Mycobacterium marinum 
M]
 gi|183175694|gb|ACC40804.1| conserved polyketide synthase associated protein PapA3 [Mycobacterium 
marinum M]
Length=502

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 33/85 (39%), Positives = 55/85 (65%), Gaps = 2/85 (2%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AG   LSA+    ++ + AR+  DG +  Q  + VN+  +E+ +T L P++P+A+ S+
Sbjct  388  LDAGIPPLSAMANSHVEGLRARLCHDGGMMGQIDIRVNRLEKETQLTVLFPNNPVARESV  447

Query  133  ARHPETMQSAYVRIAEGGSRDVAPA  157
             R+ E ++SA+VR+AEG  RDV PA
Sbjct  448  TRYVEALKSAFVRVAEG--RDVMPA  470


>gi|296166952|ref|ZP_06849368.1| acyltransferase papA2 [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897691|gb|EFG77281.1| acyltransferase papA2 [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=476

 Score = 57.4 bits (137),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 24/62 (39%), Positives = 40/62 (65%), Gaps = 0/62 (0%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG  150
            +N R++ +G +  Q  +WV +   E+ VT L P +P+A+ S+ R+ + M+SAYVR A+G 
Sbjct  401  LNFRIYDEGRVSHQVLLWVIRLQHETKVTVLFPDNPVARESVGRYIQAMRSAYVRAADGR  460

Query  151  SR  152
             R
Sbjct  461  GR  462


>gi|336458158|gb|EGO37141.1| putative polyketide synthase component [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=463

 Score = 56.6 bits (135),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 22/65 (34%), Positives = 39/65 (60%), Gaps = 0/65 (0%)

Query  88   LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA  147
             D + A V+GD  +    CMWVN+ H+ + +    P + +A+GS+ R+ ETM++ + R+ 
Sbjct  396  FDGLRAGVWGDNRLSETVCMWVNRMHDRTQLVVAYPGTDVARGSVRRYVETMRAEFARVC  455

Query  148  EGGSR  152
            + G R
Sbjct  456  DAGPR  460


>gi|254775206|ref|ZP_05216722.1| PapA2 [Mycobacterium avium subsp. avium ATCC 25291]
 gi|336457458|gb|EGO36467.1| putative polyketide synthase component [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=468

 Score = 55.8 bits (133),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 24/65 (37%), Positives = 41/65 (64%), Gaps = 0/65 (0%)

Query  87   QLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRI  146
            Q D +NA ++GDG    Q  MWVN+F  E+T+T   P +P+A+ S+ R+   +++  +R+
Sbjct  360  QWDGLNAGIYGDGRSSDQVLMWVNRFDTETTLTVAFPQNPVARDSVERYIRAVRAMCLRV  419

Query  147  AEGGS  151
             E G+
Sbjct  420  VEHGA  424


>gi|41407792|ref|NP_960628.1| PapA2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396146|gb|AAS04011.1| PapA2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length=505

 Score = 55.5 bits (132),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 25/68 (37%), Positives = 42/68 (62%), Gaps = 0/68 (0%)

Query  87   QLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRI  146
            Q D +NA ++GDG    Q  MWVN+F  E+T+T   P +P+A+ S+ R+   +++  +R+
Sbjct  397  QWDGLNAGIYGDGRSSDQVLMWVNRFDTETTLTVAFPQNPVARDSVERYIRAVRAMCLRV  456

Query  147  AEGGSRDV  154
             E G+  V
Sbjct  457  VEHGAAAV  464


>gi|118464276|ref|YP_881912.1| PapA2 protein [Mycobacterium avium 104]
 gi|118165563|gb|ABK66460.1| PapA2 protein [Mycobacterium avium 104]
Length=468

 Score = 55.5 bits (132),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 24/65 (37%), Positives = 41/65 (64%), Gaps = 0/65 (0%)

Query  87   QLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRI  146
            Q D +NA ++GDG    Q  MWVN+F  E+T+T   P +P+A+ S+ R+   +++  +R+
Sbjct  360  QWDGLNAGIYGDGRSSDQVLMWVNRFDTETTLTVAFPQNPVARDSVERYIRAVRAMCLRV  419

Query  147  AEGGS  151
             E G+
Sbjct  420  VEHGA  424


>gi|342857522|ref|ZP_08714178.1| PapA2 protein [Mycobacterium colombiense CECT 3035]
 gi|342134855|gb|EGT88021.1| PapA2 protein [Mycobacterium colombiense CECT 3035]
Length=463

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 21/65 (33%), Positives = 40/65 (62%), Gaps = 0/65 (0%)

Query  88   LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA  147
             D + A V+GD  +    CMWVN+ H+++ +    P + +A+ S+ R+ ETM++ + R++
Sbjct  396  FDGLRAGVWGDNRLSETVCMWVNRMHDKTQLVVAYPGTDVARSSVLRYVETMRAEFTRVS  455

Query  148  EGGSR  152
            + G R
Sbjct  456  DAGLR  460


>gi|254774723|ref|ZP_05216239.1| PapA2 protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=386

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 21/63 (34%), Positives = 40/63 (64%), Gaps = 0/63 (0%)

Query  88   LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA  147
             D + A V+GD  +    CMWVN+ H+++ +    P + +A+ S++R+ ETM++ + R+A
Sbjct  319  FDGLRAGVWGDNRLSETVCMWVNRMHDKTQLVVAYPGTDVARRSVSRYVETMRAEFTRVA  378

Query  148  EGG  150
            + G
Sbjct  379  DAG  381


>gi|169627951|ref|YP_001701600.1| polyketide synthase associated protein PapA2 [Mycobacterium abscessus 
ATCC 19977]
 gi|169239918|emb|CAM60946.1| Possible conserved polyketide synthase associated protein PapA2 
[Mycobacterium abscessus]
Length=463

 Score = 55.1 bits (131),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 22/65 (34%), Positives = 40/65 (62%), Gaps = 0/65 (0%)

Query  84   IAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAY  143
            ++ + DR+N  ++GD     Q CMWVN+F  E+ +T   P + +A+ S++R+ E  +  Y
Sbjct  394  VSAEWDRINGGIYGDSRSSDQVCMWVNRFENETNLTISFPDNAVARESVSRYFEVARVVY  453

Query  144  VRIAE  148
             R+A+
Sbjct  454  QRVAQ  458


>gi|15827628|ref|NP_301891.1| PKS-associated protein, unknown function [Mycobacterium leprae 
TN]
 gi|221230105|ref|YP_002503521.1| PKS-associated protein, unknown function [Mycobacterium leprae 
Br4923]
 gi|466785|gb|AAA17061.1| sus [Mycobacterium leprae]
 gi|13093179|emb|CAC31611.1| PKS-associated protein, unknown function [Mycobacterium leprae]
 gi|219933212|emb|CAR71325.1| PKS-associated protein, unknown function [Mycobacterium leprae 
Br4923]
Length=471

 Score = 55.1 bits (131),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 30/84 (36%), Positives = 49/84 (59%), Gaps = 1/84 (1%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AG   LS ++   LD +N  V+ DG    Q  ++V +  +E+ V  + P +P AQ S+
Sbjct  388  LDAGTAPLSVLLTAGLDGLNIGVYSDGRYSYQMSIYVIRVEQETAVAVMFPDNPEAQESV  447

Query  133  ARHPETMQSAYVRIAEGGS-RDVA  155
            AR+ ET++S +  +AE G  R+VA
Sbjct  448  ARYLETLKSVFECVAESGHWRNVA  471


>gi|342860077|ref|ZP_08716729.1| putative polyketide synthase associated protein PAPA2 [Mycobacterium 
colombiense CECT 3035]
 gi|342132455|gb|EGT85684.1| putative polyketide synthase associated protein PAPA2 [Mycobacterium 
colombiense CECT 3035]
Length=412

 Score = 53.5 bits (127),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 27/67 (41%), Positives = 39/67 (59%), Gaps = 2/67 (2%)

Query  91   MNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEG-  149
            +N R++ +G +  Q  MWV +  +E+ VT L P +PIA  SIA +   M+S Y R+A   
Sbjct  341  LNFRIYDEGRVSHQVSMWVTRLQQETKVTVLFPDNPIAGQSIAGYVAAMKSVYARVANCR  400

Query  150  -GSRDVA  155
             GSR  A
Sbjct  401  RGSRPFA  407


>gi|254821612|ref|ZP_05226613.1| PapA2 protein [Mycobacterium intracellulare ATCC 13950]
Length=386

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 20/63 (32%), Positives = 40/63 (64%), Gaps = 0/63 (0%)

Query  88   LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA  147
             D + A V+GD  +    CMWVN+ H+++ +    P + +A+ S++R+ ET+++ + R+A
Sbjct  319  FDGLRAGVWGDNRLSETVCMWVNRMHDKTQLVVAYPGTDVARRSVSRYVETIRAEFTRVA  378

Query  148  EGG  150
            + G
Sbjct  379  DAG  381


>gi|118467292|ref|YP_881224.1| PapA2 protein [Mycobacterium avium 104]
 gi|118168579|gb|ABK69476.1| PapA2 protein [Mycobacterium avium 104]
Length=463

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 21/65 (33%), Positives = 38/65 (59%), Gaps = 0/65 (0%)

Query  88   LDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA  147
             D + A V+G   +    CMWVN+ H+ + +    P + +A+GS+ R+ ETM++ + R+ 
Sbjct  396  FDGLRAGVWGYNRLSETVCMWVNRMHDRTQLVVAYPGTDVARGSVRRYVETMRAEFARVC  455

Query  148  EGGSR  152
            + G R
Sbjct  456  DAGPR  460


>gi|118471167|ref|YP_888987.1| condensation domain-containing protein [Mycobacterium smegmatis 
str. MC2 155]
 gi|118172454|gb|ABK73350.1| condensation domain protein [Mycobacterium smegmatis str. MC2 
155]
Length=480

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 26/84 (31%), Positives = 46/84 (55%), Gaps = 0/84 (0%)

Query  71   ASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQG  130
            + + A A  LS  +  + +R+N R+F +     Q  MWVN+F   + +T   P++P+A+ 
Sbjct  384  SYLDATAAPLSPAVVAEWNRINGRIFSEMGAANQVGMWVNQFGSGTWITVAFPNNPVARA  443

Query  131  SIARHPETMQSAYVRIAEGGSRDV  154
            S+  + +  +S  V +AEG   DV
Sbjct  444  SVQEYVDAFRSVCVAVAEGRHDDV  467


>gi|289555030|ref|ZP_06444240.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
KZN 605]
 gi|289439662|gb|EFD22155.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
KZN 605]
Length=471

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 26/80 (33%), Positives = 46/80 (58%), Gaps = 0/80 (0%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AGA  LS ++  +L   N  V+ DG    Q  ++V +  + + V  + P +PIA+ S+
Sbjct  388  LDAGAAPLSVLLTAELTGTNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIARESV  447

Query  133  ARHPETMQSAYVRIAEGGSR  152
            AR+  T++S + R+AE G +
Sbjct  448  ARYLATLKSVFQRVAESGQQ  467


>gi|289442615|ref|ZP_06432359.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
T46]
 gi|289569186|ref|ZP_06449413.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
T17]
 gi|289749724|ref|ZP_06509102.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
T92]
 gi|289753251|ref|ZP_06512629.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
EAS054]
 gi|289415534|gb|EFD12774.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
T46]
 gi|289542940|gb|EFD46588.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
T17]
 gi|289690311|gb|EFD57740.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
T92]
 gi|289693838|gb|EFD61267.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
EAS054]
Length=472

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 26/80 (33%), Positives = 46/80 (58%), Gaps = 0/80 (0%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AGA  LS ++  +L   N  V+ DG    Q  ++V +  + + V  + P +PIA+ S+
Sbjct  389  LDAGAAPLSVLLTAELTGTNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIARESV  448

Query  133  ARHPETMQSAYVRIAEGGSR  152
            AR+  T++S + R+AE G +
Sbjct  449  ARYLATLKSVFQRVAESGQQ  468


>gi|306781741|ref|ZP_07420078.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
SUMu002]
 gi|306783900|ref|ZP_07422222.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
SUMu003]
 gi|306788266|ref|ZP_07426588.1| polyketide synthase associated protein papA3 [Mycobacterium tuberculosis 
SUMu004]
 13 more sequence titles
 Length=472

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 26/80 (33%), Positives = 46/80 (58%), Gaps = 0/80 (0%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AGA  LS ++  +L   N  V+ DG    Q  ++V +  + + V  + P +PIA+ S+
Sbjct  389  LDAGAAPLSVLLTAELTGTNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIARESV  448

Query  133  ARHPETMQSAYVRIAEGGSR  152
            AR+  T++S + R+AE G +
Sbjct  449  ARYLATLKSVFQRVAESGQQ  468


>gi|15608322|ref|NP_215698.1| polyketide synthase associated protein PapA3 [Mycobacterium tuberculosis 
H37Rv]
 gi|15840625|ref|NP_335662.1| hypothetical protein MT1219 [Mycobacterium tuberculosis CDC1551]
 gi|31792375|ref|NP_854868.1| polyketide synthase associated protein PapA3 [Mycobacterium bovis 
AF2122/97]
 54 more sequence titles
 Length=472

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 26/80 (33%), Positives = 46/80 (58%), Gaps = 0/80 (0%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            + AGA  LS ++  +L   N  V+ DG    Q  ++V +  + + V  + P +PIA+ S+
Sbjct  389  LDAGAAPLSVLLTAELTGTNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIARESV  448

Query  133  ARHPETMQSAYVRIAEGGSR  152
            AR+  T++S + R+AE G +
Sbjct  449  ARYLATLKSVFQRVAESGQQ  468


>gi|342857528|ref|ZP_08714184.1| condensation domain-containing protein [Mycobacterium colombiense 
CECT 3035]
 gi|342134861|gb|EGT88027.1| condensation domain-containing protein [Mycobacterium colombiense 
CECT 3035]
Length=468

 Score = 48.9 bits (115),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 24/77 (32%), Positives = 46/77 (60%), Gaps = 1/77 (1%)

Query  76   GALLLSAVIAIQLD-RMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIAR  134
            GA  L+AV+  +L    N  ++ DG    Q  +++ ++ E + +  + P +PIAQ S+ R
Sbjct  391  GAAPLNAVLTAELGGAKNIGIYSDGRYSYQLTIYIFRYGEGTIMAVMHPDNPIAQKSVTR  450

Query  135  HPETMQSAYVRIAEGGS  151
            + E M+SA+ ++A+ G+
Sbjct  451  YVEAMKSAFTQVADRGN  467


>gi|118463607|ref|YP_880987.1| condensation domain-containing protein [Mycobacterium avium 104]
 gi|254774578|ref|ZP_05216094.1| condensation domain-containing protein [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118164894|gb|ABK65791.1| condensation domain protein [Mycobacterium avium 104]
Length=473

 Score = 45.1 bits (105),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 27/78 (35%), Positives = 45/78 (58%), Gaps = 2/78 (2%)

Query  75   AGALLLSAVIAI-QLDRMNA-RVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            AGA  L+AV+A   L   N   ++ DG    Q  ++V ++ E + +  + P +P+A  S+
Sbjct  390  AGAAPLNAVLAAADLGYANNIGIYSDGRYSYQLTIYVFRYGEGTAMAMMYPDNPVAHKSV  449

Query  133  ARHPETMQSAYVRIAEGG  150
            AR+ ETM+S   R+A+ G
Sbjct  450  ARYTETMRSVCGRVADTG  467


>gi|41408329|ref|NP_961165.1| PapA3_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396685|gb|AAS04548.1| PapA3_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|336458233|gb|EGO37214.1| putative polyketide synthase component [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=473

 Score = 43.9 bits (102),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 26/78 (34%), Positives = 45/78 (58%), Gaps = 2/78 (2%)

Query  75   AGALLLSAVIAI-QLDRMNA-RVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            AGA  L+AV+A   L   N   ++ DG    Q  ++V ++ + + +  + P +P+A  S+
Sbjct  390  AGAAPLNAVLAAADLGYANNIGIYSDGRYSYQLTIYVFRYGDGTAMAMMYPDNPVAHKSV  449

Query  133  ARHPETMQSAYVRIAEGG  150
            AR+ ETM+S   R+A+ G
Sbjct  450  ARYTETMRSVCGRVADTG  467


>gi|340626547|ref|YP_004744999.1| hypothetical protein MCAN_15491 [Mycobacterium canettii CIPT 
140010059]
 gi|340004737|emb|CCC43881.1| putative uncharacterized protein [Mycobacterium canettii CIPT 
140010059]
Length=481

 Score = 42.7 bits (99),  Expect = 0.016, Method: Compositional matrix adjust.
 Identities = 30/88 (35%), Positives = 46/88 (53%), Gaps = 2/88 (2%)

Query  73   MPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSI  132
            M AG   LSAV+A  L   NA  + D    A   M V +  +E ++    P++PIA+ S 
Sbjct  394  MDAGLPPLSAVVATALKGANAIAYNDARSPAYLYMSVIRLFDEVSLMIQFPNNPIARESA  453

Query  133  ARHPETMQSAYVRIAEGGSRDVAPAAQL  160
             R+ E + S + R+A G  +  APA ++
Sbjct  454  TRYGEVISSIFSRVAAG--QYAAPAVRV  479


>gi|254819859|ref|ZP_05224860.1| condensation domain-containing protein [Mycobacterium intracellulare 
ATCC 13950]
Length=473

 Score = 42.7 bits (99),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 22/78 (29%), Positives = 43/78 (56%), Gaps = 3/78 (3%)

Query  74   PAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIA  133
            P  A+L +A + +     N  ++ DG    Q  +++ ++ E + +  + P +P+A+ S+ 
Sbjct  394  PLNAILAAADLGLA---NNIGIYPDGRYSHQLTIYIFRYGEGTVMAIMHPDNPVARKSVV  450

Query  134  RHPETMQSAYVRIAEGGS  151
            R+ E M+S  VR+A  GS
Sbjct  451  RYMEAMKSVCVRVAGSGS  468


>gi|342859252|ref|ZP_08715906.1| hypothetical protein MCOL_10248 [Mycobacterium colombiense CECT 
3035]
 gi|342133493|gb|EGT86696.1| hypothetical protein MCOL_10248 [Mycobacterium colombiense CECT 
3035]
Length=491

 Score = 40.0 bits (92),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 19/53 (36%), Positives = 30/53 (57%), Gaps = 0/53 (0%)

Query  95   VFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIA  147
             +GD        MW+N+  E +TVT   P + IA+ S+ R+  T+  A+VR+A
Sbjct  407  TYGDSLSHGGINMWINRQAENTTVTMSFPDNAIARESVLRYIATLTQAFVRVA  459


>gi|296170520|ref|ZP_06852106.1| acyltransferase papA1 [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894832|gb|EFG74555.1| acyltransferase papA1 [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=473

 Score = 40.0 bits (92),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 16/56 (29%), Positives = 34/56 (61%), Gaps = 0/56 (0%)

Query  95   VFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG  150
            ++ DG    Q  ++V ++ E + +  + P++ +AQ S++R+   M+S  VR+A+ G
Sbjct  412  IYSDGRYSYQLTIYVFRYEEGTAMAVMYPANAVAQKSVSRYLAAMKSVCVRVADTG  467


>gi|169628035|ref|YP_001701684.1| polyketide synthase associated protein PapA3 [Mycobacterium abscessus 
ATCC 19977]
 gi|146760178|emb|CAJ77675.1| PapA3 protein [Mycobacterium abscessus]
 gi|169240002|emb|CAM61030.1| Probable conserved polyketide synthase associated protein PapA3 
[Mycobacterium abscessus]
Length=486

 Score = 39.3 bits (90),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 17/59 (29%), Positives = 33/59 (56%), Gaps = 0/59 (0%)

Query  92   NARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGG  150
            N  ++ DG    Q  +++ ++ E + +  + P +PIA+ S  R+ E M+S   R+A+ G
Sbjct  422  NIGIYPDGRFSYQLTIYIFRYGEGTAMAIMHPDNPIAEKSALRYMEAMKSVCARVADTG  480


>gi|169630229|ref|YP_001703878.1| polyketide synthase associated protein [Mycobacterium abscessus 
ATCC 19977]
 gi|169242196|emb|CAM63224.1| Probable conserved polyketide synthase associated protein [Mycobacterium 
abscessus]
Length=471

 Score = 39.3 bits (90),  Expect = 0.19, Method: Compositional matrix adjust.
 Identities = 17/54 (32%), Positives = 33/54 (62%), Gaps = 2/54 (3%)

Query  104  QACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPA  157
            Q  +++++F  E+T+    P +P+A+ SI R+ + ++S + R+ E    DV PA
Sbjct  419  QLTIFISRFPTETTLMIAYPDNPVARESITRYVDLVKSTFARVCE--QNDVVPA  470


>gi|340628793|ref|YP_004747245.1| putative polyketide synthase associated protein PAPA1 [Mycobacterium 
canettii CIPT 140010059]
 gi|340006983|emb|CCC46174.1| putative conserved polyketide synthase associated protein PAPA1 
[Mycobacterium canettii CIPT 140010059]
Length=511

 Score = 38.9 bits (89),  Expect = 0.28, Method: Compositional matrix adjust.
 Identities = 22/72 (31%), Positives = 40/72 (56%), Gaps = 2/72 (2%)

Query  80   LSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETM  139
            LSAV  +  + +N   + DG +       V +F +E+  + L P +P+A+ S+A +   +
Sbjct  394  LSAVTKL-FEGLNVGTYSDGRVTYPLSTMVGRF-DETAASVLFPDNPVARESVAAYLRAI  451

Query  140  QSAYVRIAEGGS  151
            +S  +RIA GG+
Sbjct  452  RSVCMRIANGGT  463


>gi|146760145|emb|CAJ77666.1| papA3 protein [Mycobacterium chelonae]
Length=513

 Score = 38.9 bits (89),  Expect = 0.28, Method: Compositional matrix adjust.
 Identities = 22/77 (29%), Positives = 42/77 (55%), Gaps = 2/77 (2%)

Query  76   GALLLSAVIAIQLDRM--NARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIA  133
            GA  L+A++A     +  N  ++ DG    Q  +++ ++ E + +  + P +PIA+ S  
Sbjct  431  GAAPLNAILAAGELGLADNIGIYPDGRFSYQLTIYIFRYGEGTAMAIMHPDNPIAEKSAL  490

Query  134  RHPETMQSAYVRIAEGG  150
            R+ E M+S   R+A+ G
Sbjct  491  RYMEAMKSVCGRVADSG  507



Lambda     K      H
   0.318    0.131    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128736477480


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40