BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1531
Length=188
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608669|ref|NP_216047.1| hypothetical protein Rv1531 [Mycoba... 380 5e-104
gi|339294507|gb|AEJ46618.1| hypothetical protein CCDC5079_1428 [... 369 2e-100
gi|183982358|ref|YP_001850649.1| hypothetical protein MMAR_2345 ... 326 1e-87
gi|240167913|ref|ZP_04746572.1| hypothetical protein MkanA1_0126... 311 4e-83
gi|342860886|ref|ZP_08717536.1| carboxymuconolactone decarboxyla... 296 1e-78
gi|254822779|ref|ZP_05227780.1| hypothetical protein MintA_22809... 289 1e-76
gi|296164405|ref|ZP_06846980.1| carboxymuconolactone decarboxyla... 289 2e-76
gi|336457977|gb|EGO36965.1| hypothetical protein MAPs_17840 [Myc... 283 7e-75
gi|254775686|ref|ZP_05217202.1| hypothetical protein MaviaA2_136... 283 8e-75
gi|118466970|ref|YP_882420.1| hypothetical protein MAV_3238 [Myc... 283 1e-74
gi|41407341|ref|NP_960177.1| hypothetical protein MAP1243 [Mycob... 283 1e-74
gi|183983161|ref|YP_001851452.1| hypothetical protein MMAR_3164 ... 218 5e-55
gi|169629127|ref|YP_001702776.1| hypothetical protein MAB_2040c ... 212 2e-53
gi|108800192|ref|YP_640389.1| carboxymuconolactone decarboxylase... 210 9e-53
gi|145225205|ref|YP_001135883.1| carboxymuconolactone decarboxyl... 210 1e-52
gi|296163961|ref|ZP_06846593.1| carboxymuconolactone decarboxyla... 201 4e-50
gi|167621575|ref|YP_001672083.1| carboxymuconolactone decarboxyl... 180 8e-44
gi|154252252|ref|YP_001413076.1| carboxymuconolactone decarboxyl... 167 7e-40
gi|342857698|ref|ZP_08714354.1| carboxymuconolactone decarboxyla... 142 2e-32
gi|218778542|ref|YP_002429860.1| carboxymuconolactone decarboxyl... 103 2e-20
gi|158314733|ref|YP_001507241.1| carboxymuconolactone decarboxyl... 89.4 2e-16
gi|163792558|ref|ZP_02186535.1| hypothetical protein BAL199_1696... 84.7 5e-15
gi|158521070|ref|YP_001528940.1| carboxymuconolactone decarboxyl... 83.6 1e-14
gi|312200345|ref|YP_004020406.1| carboxymuconolactone decarboxyl... 83.2 1e-14
gi|331694150|ref|YP_004330389.1| carboxymuconolactone decarboxyl... 83.2 2e-14
gi|120405166|ref|YP_954995.1| carboxymuconolactone decarboxylase... 82.4 3e-14
gi|27377823|ref|NP_769352.1| hypothetical protein bll2712 [Brady... 81.6 5e-14
gi|319762010|ref|YP_004125947.1| carboxymuconolactone decarboxyl... 81.3 6e-14
gi|158316543|ref|YP_001509051.1| carboxymuconolactone decarboxyl... 80.5 1e-13
gi|293607013|ref|ZP_06689357.1| carboxymuconolactone decarboxyla... 79.7 2e-13
gi|312198224|ref|YP_004018285.1| carboxymuconolactone decarboxyl... 79.3 2e-13
gi|145223027|ref|YP_001133705.1| carboxymuconolactone decarboxyl... 79.3 2e-13
gi|183984711|ref|YP_001853002.1| hypothetical protein MMAR_4743 ... 79.0 3e-13
gi|332286545|ref|YP_004418456.1| hypothetical protein PT7_3292 [... 79.0 3e-13
gi|317405991|gb|EFV86269.1| hypothetical protein HMPREF0005_0265... 78.2 5e-13
gi|163857859|ref|YP_001632157.1| hypothetical protein Bpet3546 [... 77.8 6e-13
gi|302524899|ref|ZP_07277241.1| predicted protein [Streptomyces ... 77.8 7e-13
gi|108797613|ref|YP_637810.1| carboxymuconolactone decarboxylase... 77.8 7e-13
gi|158313468|ref|YP_001505976.1| carboxymuconolactone decarboxyl... 77.8 8e-13
gi|311108164|ref|YP_003981017.1| alkylhydroperoxidase AhpD famil... 76.6 2e-12
gi|302556061|ref|ZP_07308403.1| carboxymuconolactone decarboxyla... 76.6 2e-12
gi|338783594|gb|EGP47958.1| alkylhydroperoxidase AhpD family cor... 76.3 2e-12
gi|288921071|ref|ZP_06415361.1| Carboxymuconolactone decarboxyla... 76.3 2e-12
gi|271967553|ref|YP_003341749.1| carboxymuconolactone decarboxyl... 75.9 3e-12
gi|91788017|ref|YP_548969.1| carboxymuconolactone decarboxylase ... 75.5 4e-12
gi|29826970|ref|NP_821604.1| hypothetical protein SAV_429 [Strep... 75.1 5e-12
gi|296169473|ref|ZP_06851093.1| carboxymuconolactone decarboxyla... 74.7 6e-12
gi|333992142|ref|YP_004524756.1| hypothetical protein JDM601_350... 74.3 7e-12
gi|158315507|ref|YP_001508015.1| carboxymuconolactone decarboxyl... 73.9 1e-11
gi|91780988|ref|YP_556195.1| hypothetical protein Bxe_C0971 [Bur... 73.2 2e-11
>gi|15608669|ref|NP_216047.1| hypothetical protein Rv1531 [Mycobacterium tuberculosis H37Rv]
gi|15840998|ref|NP_336035.1| hypothetical protein MT1582 [Mycobacterium tuberculosis CDC1551]
gi|31792717|ref|NP_855210.1| hypothetical protein Mb1558 [Mycobacterium bovis AF2122/97]
78 more sequence titles
Length=188
Score = 380 bits (976), Expect = 5e-104, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD
Sbjct 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA
Sbjct 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW
Sbjct 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
Query 181 PPDGLSPR 188
PPDGLSPR
Sbjct 181 PPDGLSPR 188
>gi|339294507|gb|AEJ46618.1| hypothetical protein CCDC5079_1428 [Mycobacterium tuberculosis
CCDC5079]
gi|339298143|gb|AEJ50253.1| hypothetical protein CCDC5180_1416 [Mycobacterium tuberculosis
CCDC5180]
Length=183
Score = 369 bits (946), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 182/183 (99%), Positives = 183/183 (100%), Gaps = 0/183 (0%)
Query 6 VPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRE 65
+PLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRE
Sbjct 1 MPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRE 60
Query 66 LVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVV 125
LVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVV
Sbjct 61 LVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVV 120
Query 126 REGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPPDGL 185
REGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPPDGL
Sbjct 121 REGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPPDGL 180
Query 186 SPR 188
SPR
Sbjct 181 SPR 183
>gi|183982358|ref|YP_001850649.1| hypothetical protein MMAR_2345 [Mycobacterium marinum M]
gi|183175684|gb|ACC40794.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=187
Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/187 (86%), Positives = 169/187 (91%), Gaps = 0/187 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
MT RVPLLPV+EAKAAADEAGVP+YMAELSIFQ LLNHPRLARTFNDLLATMLWHG LD
Sbjct 1 MTIPRVPLLPVNEAKAAADEAGVPNYMAELSIFQALLNHPRLARTFNDLLATMLWHGALD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
RLRELVIMRIGWLT CDYEWTQHWRVASGLGVSA DLLGVRDW+ YNGFGP E+AVLAA
Sbjct 61 PRLRELVIMRIGWLTACDYEWTQHWRVASGLGVSAQDLLGVRDWRQYNGFGPTERAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDD+VR+GAVSA SW+ CERELH D VL ELVT ISAW MVASILHSL+VPLEDGV+SW
Sbjct 121 TDDIVRDGAVSASSWAECERELHGDVTVLTELVTAISAWCMVASILHSLKVPLEDGVASW 180
Query 181 PPDGLSP 187
PPDG SP
Sbjct 181 PPDGCSP 187
>gi|240167913|ref|ZP_04746572.1| hypothetical protein MkanA1_01265 [Mycobacterium kansasii ATCC
12478]
Length=187
Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/187 (88%), Positives = 173/187 (93%), Gaps = 0/187 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
M +RVP LPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHG LD
Sbjct 1 MKPARVPQLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGVLD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
SRLREL IMRIGWLT CDYEWTQHWRVASGLGVSA+DLLGVRDW+ ++GFGPAE+AVLAA
Sbjct 61 SRLRELAIMRIGWLTACDYEWTQHWRVASGLGVSAEDLLGVRDWRSHDGFGPAERAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDDVVR+GAVSA SW+ACE ELH D VLIELVT I AWRMVASILHSLEVPLEDGVSSW
Sbjct 121 TDDVVRDGAVSADSWAACEHELHGDTTVLIELVTAIGAWRMVASILHSLEVPLEDGVSSW 180
Query 181 PPDGLSP 187
PPDG+SP
Sbjct 181 PPDGVSP 187
>gi|342860886|ref|ZP_08717536.1| carboxymuconolactone decarboxylase [Mycobacterium colombiense
CECT 3035]
gi|342131910|gb|EGT85167.1| carboxymuconolactone decarboxylase [Mycobacterium colombiense
CECT 3035]
Length=189
Score = 296 bits (757), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/188 (84%), Positives = 168/188 (90%), Gaps = 0/188 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
MTT+R+P LP+DEAKAAADEA VP+YMAELSIFQVLLNHP LAR NDLLATMLWHGTLD
Sbjct 1 MTTARLPQLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARGINDLLATMLWHGTLD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
SRLRELVIMRIGWLT CDYEWTQHWRVAS LGV ADDLLGVRDW + GFGP E+AVLAA
Sbjct 61 SRLRELVIMRIGWLTACDYEWTQHWRVASRLGVPADDLLGVRDWPNHAGFGPVERAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDDVVR+G+VSA+SWSACERE D VL+ELVTVI AWRMVASIL SLEVPLE+GVSSW
Sbjct 121 TDDVVRDGSVSAKSWSACEREFQGDTTVLVELVTVIGAWRMVASILQSLEVPLEEGVSSW 180
Query 181 PPDGLSPR 188
PPDG SPR
Sbjct 181 PPDGRSPR 188
>gi|254822779|ref|ZP_05227780.1| hypothetical protein MintA_22809 [Mycobacterium intracellulare
ATCC 13950]
Length=191
Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/187 (82%), Positives = 164/187 (88%), Gaps = 0/187 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
MTT+R+P LP+DEAKAAADEA VP+YMAELSIFQVLLNHP LAR NDLLATMLWHG LD
Sbjct 1 MTTARLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
+RLREL IMRIGWLT CDYEWTQHWRVAS LGV DDLLGVRDW+ Y GFGPAE+AVLAA
Sbjct 61 ARLRELAIMRIGWLTACDYEWTQHWRVASRLGVPGDDLLGVRDWRNYAGFGPAERAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDDVVR+GAVSA SW+ACERE D VL+ELVTVI AWRMV+SIL SLEVPLEDGVSSW
Sbjct 121 TDDVVRDGAVSAASWAACEREFDGDTTVLVELVTVIGAWRMVSSILQSLEVPLEDGVSSW 180
Query 181 PPDGLSP 187
PPDG P
Sbjct 181 PPDGRPP 187
>gi|296164405|ref|ZP_06846980.1| carboxymuconolactone decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900245|gb|EFG79676.1| carboxymuconolactone decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=193
Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/187 (82%), Positives = 164/187 (88%), Gaps = 0/187 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
MTT+RVP LP+DEA AAADEA VP+YMAELSIFQVLLNHP LAR NDLLATMLWHG LD
Sbjct 1 MTTARVPTLPLDEATAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
RLRELVIMRIGWLT CDYEWTQHWRVAS LGV++DDLLGVRDWQ ++GFG E+AVLAA
Sbjct 61 PRLRELVIMRIGWLTACDYEWTQHWRVASRLGVASDDLLGVRDWQAHDGFGARERAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDDVVR+ AVS SW+ACEREL CD VLIELVT I AWRMVASILHSL VPLE+GVSSW
Sbjct 121 TDDVVRDRAVSDASWAACERELGCDTTVLIELVTAIGAWRMVASILHSLRVPLEEGVSSW 180
Query 181 PPDGLSP 187
PPDG SP
Sbjct 181 PPDGRSP 187
>gi|336457977|gb|EGO36965.1| hypothetical protein MAPs_17840 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=189
Score = 283 bits (725), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 149/187 (80%), Positives = 161/187 (87%), Gaps = 0/187 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
M T+R+P LP+DEAKAAADEA VP+YMAELSIFQVLLNHP LAR NDLLATMLWHG LD
Sbjct 1 MPTARLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
SRLREL+IMRIGWLT CDYEWTQHWRVAS LGV DDLLGVRDW+ Y GFGP E+AVLAA
Sbjct 61 SRLRELIIMRIGWLTGCDYEWTQHWRVASRLGVPGDDLLGVRDWRNYPGFGPTERAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDDVVR G+VSA SW+ CE E + D VL+ELVTVI AWRMVASIL SLEVPLEDGV+SW
Sbjct 121 TDDVVRHGSVSAASWAQCEHEFNGDTTVLVELVTVIGAWRMVASILQSLEVPLEDGVASW 180
Query 181 PPDGLSP 187
PPDG P
Sbjct 181 PPDGREP 187
>gi|254775686|ref|ZP_05217202.1| hypothetical protein MaviaA2_13610 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=189
Score = 283 bits (724), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 149/187 (80%), Positives = 161/187 (87%), Gaps = 0/187 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
M T+R+P LP+DEAKAAADEA VP+YMAELSIFQVLLNHP LAR NDLLATMLWHG LD
Sbjct 1 MPTARLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
SRLREL+IMRIGWLT CDYEWTQHWRVAS LGV DDLLGVRDW+ Y GFGP E+AVLAA
Sbjct 61 SRLRELIIMRIGWLTGCDYEWTQHWRVASRLGVPGDDLLGVRDWRNYPGFGPTERAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDDVVR G+VSA SW+ CE E + D VL+ELVTVI AWRMVASIL SLEVPLEDGV+SW
Sbjct 121 TDDVVRHGSVSAASWAQCEHEFNRDTTVLVELVTVIGAWRMVASILQSLEVPLEDGVASW 180
Query 181 PPDGLSP 187
PPDG P
Sbjct 181 PPDGREP 187
>gi|118466970|ref|YP_882420.1| hypothetical protein MAV_3238 [Mycobacterium avium 104]
gi|118168257|gb|ABK69154.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
avium 104]
Length=189
Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/187 (80%), Positives = 160/187 (86%), Gaps = 0/187 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
M T+R+P LP+DEAKAAADEA VP+YMAELSIFQVLLNHP LAR NDLLATMLWHG LD
Sbjct 1 MPTARLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
SRLREL+IMRIGWLT CDYEWTQHWRVAS LGV DDLLGVRDW+ Y GFGP E+AVLAA
Sbjct 61 SRLRELIIMRIGWLTGCDYEWTQHWRVASRLGVPGDDLLGVRDWRNYPGFGPTERAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDDVVR G+VSA SW+ CE E D VL+ELVTVI AWRMVASIL SLEVPLEDGV+SW
Sbjct 121 TDDVVRHGSVSAASWAQCEHEFKRDTTVLVELVTVIGAWRMVASILQSLEVPLEDGVASW 180
Query 181 PPDGLSP 187
PPDG P
Sbjct 181 PPDGREP 187
>gi|41407341|ref|NP_960177.1| hypothetical protein MAP1243 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395693|gb|AAS03560.1| hypothetical protein MAP_1243 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=189
Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/187 (81%), Positives = 160/187 (86%), Gaps = 0/187 (0%)
Query 1 MTTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLD 60
M T R+P LP+DEAKAAADEA VP+YMAELSIFQVLLNHP LAR NDLLATMLWHG LD
Sbjct 1 MPTMRLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALD 60
Query 61 SRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAA 120
SRLRELVIMRIGWLT CDYEWTQHWRVAS LGV DDLLGVRDW+ Y GFGP E+AVLAA
Sbjct 61 SRLRELVIMRIGWLTGCDYEWTQHWRVASRLGVPGDDLLGVRDWRNYPGFGPTERAVLAA 120
Query 121 TDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSW 180
TDDVVR G+VSA SW+ CE E + D VL+ELVTVI AWRMVASIL SLEVPLEDGV+SW
Sbjct 121 TDDVVRHGSVSAASWAQCEHEFNGDTTVLVELVTVIGAWRMVASILQSLEVPLEDGVASW 180
Query 181 PPDGLSP 187
PPDG P
Sbjct 181 PPDGREP 187
>gi|183983161|ref|YP_001851452.1| hypothetical protein MMAR_3164 [Mycobacterium marinum M]
gi|183176487|gb|ACC41597.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=192
Score = 218 bits (554), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/186 (55%), Positives = 138/186 (75%), Gaps = 0/186 (0%)
Query 3 TSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSR 62
T RVP+L +++A+ A E G+P MAELS+F+V L+ P LA +L +L++G LD+R
Sbjct 4 TERVPMLDLEQARLRAAECGLPAEMAELSVFRVALHQPSLAVALYGMLEALLFNGVLDAR 63
Query 63 LRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATD 122
LREL+IMRIGW+T YEWTQHWR+A+ LGV++DDLL VRDWQ N G AE+AVLAATD
Sbjct 64 LRELIIMRIGWVTGSVYEWTQHWRIATLLGVASDDLLAVRDWQSSNRLGHAERAVLAATD 123
Query 123 DVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPP 182
DVVR+G ++ ++W+AC + + D VL+ELV I+ WR+ + +L SL +PLE G SWPP
Sbjct 124 DVVRDGVIAEENWAACHKAFNGDHAVLVELVGAIANWRLFSILLRSLNIPLESGTDSWPP 183
Query 183 DGLSPR 188
DG +PR
Sbjct 184 DGRAPR 189
>gi|169629127|ref|YP_001702776.1| hypothetical protein MAB_2040c [Mycobacterium abscessus ATCC
19977]
gi|296165277|ref|ZP_06847824.1| carboxymuconolactone decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|169241094|emb|CAM62122.1| Conserved hypothetical protein (carboxymuconolactone decarboxylase?)
[Mycobacterium abscessus]
gi|295899466|gb|EFG78925.1| carboxymuconolactone decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=192
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/184 (54%), Positives = 134/184 (73%), Gaps = 0/184 (0%)
Query 5 RVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLR 64
RVP+L ++A+ A E G+P+ +AELS+F+V L+ PR+A LL +L+ G+LD+RLR
Sbjct 6 RVPMLDREQAQLRAAECGLPEELAELSVFRVALHQPRVAVALYGLLDALLFRGSLDARLR 65
Query 65 ELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDV 124
ELVI+RIGW+T +YEWTQHWR+A+ LGV DLL VRDWQ GP E+AVLAATDDV
Sbjct 66 ELVILRIGWITGSEYEWTQHWRIATLLGVPERDLLAVRDWQNSESLGPVERAVLAATDDV 125
Query 125 VREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPPDG 184
VR+G +S ++W+ C++ + D VL+ELV I+ WR+ + +L SL +PLE G WPPDG
Sbjct 126 VRDGVISEENWAGCQKAFNSDHAVLVELVGAIANWRLFSILLRSLNIPLESGTDGWPPDG 185
Query 185 LSPR 188
+PR
Sbjct 186 RAPR 189
>gi|108800192|ref|YP_640389.1| carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119869320|ref|YP_939272.1| carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126435815|ref|YP_001071506.1| carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
gi|108770611|gb|ABG09333.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119695409|gb|ABL92482.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126235615|gb|ABN99015.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
Length=190
Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 97/186 (53%), Positives = 134/186 (73%), Gaps = 0/186 (0%)
Query 3 TSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSR 62
RVP+L ++A+ A E G+P+ +A+LS+F+V L+ PR+A LL +L+ G+LD+R
Sbjct 2 AERVPMLDREQAQLRAAECGLPEELADLSVFRVALHQPRVAVALYGLLDALLFRGSLDAR 61
Query 63 LRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATD 122
LRELVIMRIGW+T +YEWTQHWR+A+ LGV DLL VRDWQ GP E+AVLAATD
Sbjct 62 LRELVIMRIGWITGSEYEWTQHWRIATLLGVPEHDLLAVRDWQNSESLGPVERAVLAATD 121
Query 123 DVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPP 182
DVVR+G +S ++W+ C++ + D VL+ELV I+ WR+ + +L SL +PLE G WPP
Sbjct 122 DVVRDGVISEENWAGCQKAFNSDHAVLVELVGAIANWRLFSILLRSLNIPLESGTDGWPP 181
Query 183 DGLSPR 188
DG +P+
Sbjct 182 DGRAPQ 187
>gi|145225205|ref|YP_001135883.1| carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|145217691|gb|ABP47095.1| Carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
Length=183
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/180 (55%), Positives = 131/180 (73%), Gaps = 0/180 (0%)
Query 8 LLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELV 67
+L + +A+ A + G+PD MAELS+F++ L+ P +A + +L +LW G LD+RLREL+
Sbjct 1 MLALTDARERAAQCGIPDAMAELSVFRIALHQPPVAVALHGMLEALLWKGALDARLRELI 60
Query 68 IMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVRE 127
IMRIGW+TD YEWTQHWRVA L V DLLGVRDWQ FG AE+AVLAATD+ +R+
Sbjct 61 IMRIGWVTDSVYEWTQHWRVARLLDVPERDLLGVRDWQNAGHFGEAERAVLAATDETLRD 120
Query 128 GAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPPDGLSP 187
G +S ++W+ C+R LH D VL+ELV I WR+ +++L SL VPLEDG+ WPPDG+ P
Sbjct 121 GTISDETWAECQRALHGDPAVLVELVAAIGNWRLFSALLRSLHVPLEDGLEGWPPDGVRP 180
>gi|296163961|ref|ZP_06846593.1| carboxymuconolactone decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900680|gb|EFG80054.1| carboxymuconolactone decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=181
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/180 (54%), Positives = 128/180 (72%), Gaps = 0/180 (0%)
Query 8 LLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELV 67
+L + +A+ A + G+P+ +AELSIF++ L+ P +A N LL +LW G LD+RLREL+
Sbjct 1 MLGLTDARRRAAQCGIPEAIAELSIFRIALHQPSVAMALNGLLEALLWTGDLDARLRELI 60
Query 68 IMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVRE 127
IMRIGW+T YEWTQHWR+A L VS DLL VRDWQ N FG AE+AVLAATD+ +R+
Sbjct 61 IMRIGWVTGSVYEWTQHWRLARMLDVSERDLLAVRDWQNANHFGDAERAVLAATDETLRD 120
Query 128 GAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPPDGLSP 187
G +S +W+ C L D +L+ELV I WR+ +++L SL+VPLEDGV WPPDG+ P
Sbjct 121 GTISDGTWAVCRDALQADPGLLVELVAAIGNWRLFSALLRSLDVPLEDGVDEWPPDGVRP 180
>gi|167621575|ref|YP_001672083.1| carboxymuconolactone decarboxylase [Caulobacter sp. K31]
gi|167351698|gb|ABZ74424.1| Carboxymuconolactone decarboxylase [Caulobacter sp. K31]
Length=191
Score = 180 bits (457), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/185 (51%), Positives = 119/185 (65%), Gaps = 2/185 (1%)
Query 5 RVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGT-LDSRL 63
R+ LL ++EA AA AG+ + MA LS+F+VLL HP +A L T+L+ G LD+RL
Sbjct 7 RIDLLSLEEAANAAGSAGISEQMAPLSVFRVLLRHPAVAGELASTLTTLLFRGNKLDARL 66
Query 64 RELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDD 123
REL+IMRIGW T YEWTQHWRVA GL + DL RDW+G A++AVL ATDD
Sbjct 67 RELIIMRIGWRTGSVYEWTQHWRVARGLDIPEADLAASRDWRGAANLSEADRAVLQATDD 126
Query 124 VVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPPD 183
+ +G +S +W AC L D IELV I W M + +L SL +PLEDGV +WPPD
Sbjct 127 TLDQGMISDAAWEACCLHLATD-AERIELVVAIGNWTMFSQLLKSLRIPLEDGVEAWPPD 185
Query 184 GLSPR 188
G +PR
Sbjct 186 GQAPR 190
>gi|154252252|ref|YP_001413076.1| carboxymuconolactone decarboxylase [Parvibaculum lavamentivorans
DS-1]
gi|154156202|gb|ABS63419.1| Carboxymuconolactone decarboxylase [Parvibaculum lavamentivorans
DS-1]
Length=189
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 122/186 (66%), Gaps = 2/186 (1%)
Query 3 TSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGT-LDS 61
T RVPLL + EA AAA +AG+ + MA LS+F+VLL HP +A L T+L+ G LD+
Sbjct 5 TPRVPLLSMAEAAAAAAKAGISEQMAPLSVFRVLLRHPDVASELASTLNTLLFQGNKLDA 64
Query 62 RLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAAT 121
RLREL+IMRIGW T YEWTQHWRVA L + DL+ RDW+ + A++AVLAAT
Sbjct 65 RLRELIIMRIGWKTKSLYEWTQHWRVARMLDIPEADLVATRDWKNASCLSDADRAVLAAT 124
Query 122 DDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWP 181
D+ + G +S +W+AC L + IELV I W + + +L SL++PLEDGV +WP
Sbjct 125 DETLDGGMISDATWTACAAHLKTAE-ERIELVVAIGNWTLFSQLLKSLKIPLEDGVVAWP 183
Query 182 PDGLSP 187
PDG P
Sbjct 184 PDGKKP 189
>gi|342857698|ref|ZP_08714354.1| carboxymuconolactone decarboxylase [Mycobacterium colombiense
CECT 3035]
gi|342135031|gb|EGT88197.1| carboxymuconolactone decarboxylase [Mycobacterium colombiense
CECT 3035]
Length=179
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/181 (46%), Positives = 119/181 (66%), Gaps = 4/181 (2%)
Query 8 LLPVDEAKAAADEAGV-PDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLREL 66
+LP+++A AAD+ G+ P Y+ + I+ +LL P+ A+ +L +L+ TL RLREL
Sbjct 1 MLPLEQAAQAADKIGIDPRYLVQ-PIWTMLLARPKFAKALYSVLTDLLFRSTLPVRLREL 59
Query 67 VIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVR 126
+IMRIGW T ++EW QHW+VA+ GV +DLL VRDW+ + F A+QA LAA DDV+
Sbjct 60 LIMRIGWATAAEFEWAQHWQVATRAGVDPEDLLAVRDWRSSDRFDAADQAALAAADDVIA 119
Query 127 EGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWPPDGLS 186
G VS SW+A H L+EL+ V++ W V+ ++ SL VPL+DG+S WPPDG +
Sbjct 120 AGEVSDHSWAALRS--HYSDSELLELIAVVATWHYVSVLVRSLRVPLDDGMSPWPPDGRA 177
Query 187 P 187
P
Sbjct 178 P 178
>gi|218778542|ref|YP_002429860.1| carboxymuconolactone decarboxylase [Desulfatibacillum alkenivorans
AK-01]
gi|218759926|gb|ACL02392.1| Carboxymuconolactone decarboxylase [Desulfatibacillum alkenivorans
AK-01]
Length=180
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/182 (35%), Positives = 96/182 (53%), Gaps = 13/182 (7%)
Query 4 SRVPLLPVDEAKAAADE-------AGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWH 56
+R+PLL D+A E G P L++F+ + + P++ R F L +L
Sbjct 2 ARIPLLEKDQADPIMQELYERTEKGGFP----VLNLFKAVAHSPKMGRDFLRLGTAILTK 57
Query 57 GTLDSRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQA 116
G LD LREL I+RIG++ YE+TQH R+ +GVS + + V+DW+ F E+A
Sbjct 58 GDLDPILRELAILRIGYVNKAHYEFTQHVRIGKKVGVSDEQIQAVKDWKNAAIFTEEEKA 117
Query 117 VLAATDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDG 176
VL TDDV S + + ++L D++ +EL I+ + V+ IL SL + LE G
Sbjct 118 VLDYTDDVNLNIRASEEKFQKI-KDLFGDRIA-VELTLTIAYYGAVSRILESLAIELEPG 175
Query 177 VS 178
V
Sbjct 176 VK 177
>gi|158314733|ref|YP_001507241.1| carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
gi|158110138|gb|ABW12335.1| Carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
Length=189
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/178 (33%), Positives = 92/178 (52%), Gaps = 4/178 (2%)
Query 13 EAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIG 72
E+ A A ++A L+ F L HPRL F L T +++G++++ LRE I+R+
Sbjct 9 ESALAPTVASTLSHLANLNNFDPLAGHPRLRAFFECWLDTFVFNGSIEAGLRERAILRVM 68
Query 73 WLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSA 132
W +EW H+ +A G+S +++L VR A V+ A D+VV G ++
Sbjct 69 WRCARPFEWGNHYWLARAAGLSDEEILAVRTADPERNLADAVAQVVRAADEVVDLGYLTP 128
Query 133 QSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVP---LEDGVSSWPPDGLSP 187
++ +AC REL D L E + +I+ +RM+A++ S E WPPDG+ P
Sbjct 129 ETMAAC-RELFPDVGQLHEFLYLIAGYRMMATVSASTRHQHRGRERRGHQWPPDGIGP 185
>gi|163792558|ref|ZP_02186535.1| hypothetical protein BAL199_16963 [alpha proteobacterium BAL199]
gi|159182263|gb|EDP66772.1| hypothetical protein BAL199_16963 [alpha proteobacterium BAL199]
Length=183
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/181 (31%), Positives = 98/181 (55%), Gaps = 11/181 (6%)
Query 4 SRVPLLPVDE-AKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSR 62
+R+P L V++ A+A D P +++ + L+N P +AR F L + + LD R
Sbjct 2 ARIPYLNVEDLAEADRDLLKRP-----ITLHRALVNSPGMARAFGGLGQYIRYGSALDPR 56
Query 63 LRELVIMRIGWLTDCDYEWTQHWRVA-SGLGVSADDLLGVRDW--QGYNGFGPAEQAVLA 119
LREL I+++G+LT YE++ H ++ GV+ +D+ + G GF E AVL
Sbjct 57 LRELAIIQVGYLTRSPYEYSHHAKLGIEQFGVTPEDIEAITRETDHGDGGFPELETAVLK 116
Query 120 ATDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSS 179
A ++V + AVS +++ ER L D +++L+ I + V +L SL++ +ED +
Sbjct 117 AAREMVTDLAVSDATFAILERSLRRD--AMVDLIVTIGFYCGVVRVLASLQIDVEDDYAP 174
Query 180 W 180
+
Sbjct 175 Y 175
>gi|158521070|ref|YP_001528940.1| carboxymuconolactone decarboxylase [Desulfococcus oleovorans
Hxd3]
gi|158509896|gb|ABW66863.1| Carboxymuconolactone decarboxylase [Desulfococcus oleovorans
Hxd3]
Length=187
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/151 (31%), Positives = 80/151 (53%), Gaps = 2/151 (1%)
Query 31 SIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVASG 90
+IF L HP + F + +L TL R RE++I+RIGWL +YEW QH +
Sbjct 36 NIFATLARHPVFLKNFLVFGSHVLMTSTLPPRDREILILRIGWLCKAEYEWGQHVEIGRR 95
Query 91 LGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLI 150
+G+S ++++ + G+ E A++ ATD++ + + +W R H D LI
Sbjct 96 IGLSDEEIVRITAGADAPGWSELEAALIRATDELHGDAFIQDATWHILSR--HYDARQLI 153
Query 151 ELVTVISAWRMVASILHSLEVPLEDGVSSWP 181
+LV + + MV+ L++ V L++ +S +P
Sbjct 154 DLVFTVGQYNMVSMALNTFGVQLDERLSGFP 184
>gi|312200345|ref|YP_004020406.1| carboxymuconolactone decarboxylase [Frankia sp. EuI1c]
gi|311231681|gb|ADP84536.1| Carboxymuconolactone decarboxylase [Frankia sp. EuI1c]
Length=190
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/157 (30%), Positives = 79/157 (51%), Gaps = 5/157 (3%)
Query 22 GVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEW 81
G P M L F +HP LAR F +L TL R RE++++R+ C Y W
Sbjct 37 GQPRPMGMLGTFA---HHPELARAFFTFNGQVLLATTLTPRQREILVLRVAARRSCGYLW 93
Query 82 TQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERE 141
+H +A+ G++A+D + + FG + A+L A D+V+ G V+ ++WS
Sbjct 94 AEHIHLAAAAGLTAEDAAQISTGPAVSYFGHLDAALLTAVDEVLTAGTVTDETWSVLSAA 153
Query 142 LHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVS 178
+ L++++ I A+ VAS+L S + +D +S
Sbjct 154 FDVKQ--LLDVIFTIGAYETVASMLRSFGIEPDDPIS 188
>gi|331694150|ref|YP_004330389.1| carboxymuconolactone decarboxylase [Pseudonocardia dioxanivorans
CB1190]
gi|326948839|gb|AEA22536.1| Carboxymuconolactone decarboxylase [Pseudonocardia dioxanivorans
CB1190]
Length=190
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/168 (33%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query 14 AKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGW 73
AK D+ GVP L+IF+ + HPRL + FN L L G L +R RELV++R W
Sbjct 26 AKTMGDDRGVP-----LAIFRTMARHPRLMKRFNVLGGFFLTRGELPARERELVVLRTAW 80
Query 74 LTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQ 133
C YEW QH + G++ ++ V + + P + +L A D+V+ VS
Sbjct 81 RCGCVYEWAQHVLIGGKSGLTEKEIERVA--TESDEWSPRDLTLLRAADEVLDAVDVSDA 138
Query 134 SWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSSWP 181
+W+A + V +ELV ++ +RM A L++ V + + WP
Sbjct 139 TWAALGHD--WTDVQRVELVVLVGFYRMAAGFLNATGVVKDADLPDWP 184
>gi|120405166|ref|YP_954995.1| carboxymuconolactone decarboxylase [Mycobacterium vanbaalenii
PYR-1]
gi|119957984|gb|ABM14989.1| Carboxymuconolactone decarboxylase [Mycobacterium vanbaalenii
PYR-1]
Length=176
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/174 (31%), Positives = 90/174 (52%), Gaps = 12/174 (6%)
Query 5 RVPLLPVDEAKAAADEAGVPDYMAEL-------SIFQVLLNHPRLARTFNDLLATMLWHG 57
R+ LP D+ A++A AEL ++ LL HP+LAR F +L+
Sbjct 2 RLAPLPADQWDGVAEQALSGLMPAELRNPETAGNLVGTLLRHPKLARAFLRFNFQLLYGT 61
Query 58 TLDSRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAV 117
TL RLRE V++R+ L++C+YEW H + G+S D + G+ + + F ++AV
Sbjct 62 TLPERLREFVVLRVARLSNCEYEWRHHVAMGRDAGLSDDVIAGIERGEAVDEF---DRAV 118
Query 118 LAATDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEV 171
L A D++ + +S +W+A H D+ L++LV I + +A +++ V
Sbjct 119 LTAVDELHHDSVISDSTWTALSS--HLDERQLMDLVFTIGCYGALAMAINTFGV 170
>gi|27377823|ref|NP_769352.1| hypothetical protein bll2712 [Bradyrhizobium japonicum USDA 110]
gi|27350968|dbj|BAC47977.1| bll2712 [Bradyrhizobium japonicum USDA 110]
Length=184
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/174 (28%), Positives = 95/174 (55%), Gaps = 16/174 (9%)
Query 4 SRVPLLPVDEAKAAADEAGVPDYMAEL----SIFQVLLNHPRLARTFNDLLATMLWHGTL 59
+R+P L D+ P+Y L ++ ++L+N P +AR FN + + + L
Sbjct 2 ARLPYLEADQV--------APEYRDMLKRNTNLHKLLVNSPEMARAFNGIGGYIRFKSKL 53
Query 60 DSRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVR-DWQGY-NGFGPAEQAV 117
D RLREL I+++GW+ +YE+T H ++ GV+ +D+ G+ + +G + P +AV
Sbjct 54 DPRLRELAILQVGWMERSEYEFTHHVKIGKEFGVTDEDIAGLMAETEGKPSKLEPLARAV 113
Query 118 LAATDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEV 171
L ++VRE A+S +++ ++ H +++LV I+ + V +L ++++
Sbjct 114 LKGAREMVRELAMSDATFAEIKQ--HVSDEHMVDLVLTIAFYCGVVRVLATMKI 165
>gi|319762010|ref|YP_004125947.1| carboxymuconolactone decarboxylase [Alicycliphilus denitrificans
BC]
gi|330826171|ref|YP_004389474.1| carboxymuconolactone decarboxylase [Alicycliphilus denitrificans
K601]
gi|317116571|gb|ADU99059.1| Carboxymuconolactone decarboxylase [Alicycliphilus denitrificans
BC]
gi|329311543|gb|AEB85958.1| Carboxymuconolactone decarboxylase [Alicycliphilus denitrificans
K601]
Length=174
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/147 (34%), Positives = 80/147 (55%), Gaps = 2/147 (1%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
L ++Q+LL+ +A + + L + +L +RELVIMR+ L YE QH +A
Sbjct 29 LHLYQMLLHSAPVAEGWLNYLTAIRQKSSLPGDVRELVIMRVALLNHAPYEADQHAPIAL 88
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVL 149
GVS D L +++WQG F E+AVLA TD + R+ VS + +++ H + L
Sbjct 89 REGVSQDKLDALKEWQGCPLFDARERAVLAYTDAMTRQVQVSDEVFASV--AAHFEPPRL 146
Query 150 IELVTVISAWRMVASILHSLEVPLEDG 176
+EL ++A+ MV+ L +L++ D
Sbjct 147 VELTATVAAYNMVSRFLEALQIHSHDA 173
>gi|158316543|ref|YP_001509051.1| carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
gi|158111948|gb|ABW14145.1| Carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
Length=229
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/152 (33%), Positives = 77/152 (51%), Gaps = 7/152 (4%)
Query 21 AGVPDYMAELSIFQVLLNHPRLARTF---NDLLATMLWHGTLDSRLRELVIMRIGWLTDC 77
+G PD + +H +L+ TF DL A H TLD R REL+I+R+ W T
Sbjct 58 SGAPDAPPMPKALGLFAHHVQLSETFLAFTDLFAGE--HATLDPRHRELLILRVAWRTRS 115
Query 78 DYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSA 137
YEW QH R+ G++ + L + + P E+A+LAATD ++ + V +W
Sbjct 116 GYEWAQHTRIGMQAGLTTEQLYAIPHGAEAEVWTPVERALLAATDQMIDQSRVGDDTWQL 175
Query 138 CERELHCDKVVLIELVTVISAWRMVASILHSL 169
H D L+EL V+ + +A++L+S+
Sbjct 176 LAS--HFDAGQLLELSFVVGGYLCLAAVLNSV 205
>gi|293607013|ref|ZP_06689357.1| carboxymuconolactone decarboxylase [Achromobacter piechaudii
ATCC 43553]
gi|292814610|gb|EFF73747.1| carboxymuconolactone decarboxylase [Achromobacter piechaudii
ATCC 43553]
Length=175
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/146 (35%), Positives = 78/146 (54%), Gaps = 1/146 (0%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
L ++Q+LL+ P +A + + L ++ TL LRELVIMR+ L YE QH +A
Sbjct 29 LHLYQMLLHSPAVAGGWLNYLTSIRQLSTLPGDLRELVIMRVAVLNGAPYEADQHAPIAL 88
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVL 149
GVS L + DW+ F E+AVLA TD + R VS + A + +K++
Sbjct 89 KEGVSQAQLDALDDWENSALFDEREKAVLAYTDAMTRHVQVSEVVFQAARAAMGSEKLI- 147
Query 150 IELVTVISAWRMVASILHSLEVPLED 175
+EL ++A+ MV+ L +L+V D
Sbjct 148 VELTATVAAYNMVSRFLEALQVHSHD 173
>gi|312198224|ref|YP_004018285.1| carboxymuconolactone decarboxylase [Frankia sp. EuI1c]
gi|311229560|gb|ADP82415.1| Carboxymuconolactone decarboxylase [Frankia sp. EuI1c]
Length=203
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/153 (29%), Positives = 81/153 (53%), Gaps = 2/153 (1%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
+++ L ++P L R F +L+ TL +R REL+++R+ L CDYEW QH +A
Sbjct 43 VNLLGTLAHYPELTREFLSFNGHILYGTTLSARQRELLVLRVAALRKCDYEWAQHTILAR 102
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVL 149
G+ +++ V D G+ E+++L A D+++ + V ++WS E D+ L
Sbjct 103 DAGLRDEEIRRVPDGPDAPGWSLVERSLLRAVDELLADARVGDETWSVLAHEF--DERQL 160
Query 150 IELVTVISAWRMVASILHSLEVPLEDGVSSWPP 182
++++ + + MVA L S V E ++ + P
Sbjct 161 MDVIFTVGTYEMVAFALRSFAVEPEPDLAPYLP 193
>gi|145223027|ref|YP_001133705.1| carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|315443483|ref|YP_004076362.1| hypothetical protein Mspyr1_18660 [Mycobacterium sp. Spyr1]
gi|145215513|gb|ABP44917.1| Carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|315261786|gb|ADT98527.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=176
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/174 (32%), Positives = 90/174 (52%), Gaps = 12/174 (6%)
Query 5 RVPLLPVDEAKAAADEAG---VPDYMAEL----SIFQVLLNHPRLARTFNDLLATMLWHG 57
RV LP D+ D+A +P+ M ++ L+ HPRLA+ F +L+
Sbjct 2 RVAPLPADQWDDTVDKALSGLMPEEMRNPETAGNLVATLVRHPRLAKGFLRFNFHLLYGS 61
Query 58 TLDSRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAV 117
+L +RLREL ++RI LT C+YEW H + G+S D + G+ + +G ++AV
Sbjct 62 SLPARLRELAVLRIAHLTKCEYEWLHHVEMGREAGLSDDVIDGITRGEATDGL---DRAV 118
Query 118 LAATDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEV 171
L A D++ + VS +W+A H D+ L++LV I + +A +++ V
Sbjct 119 LNAVDELQNDSVVSDATWTALSD--HLDERQLMDLVFTIGCYGALAMAINTFGV 170
>gi|183984711|ref|YP_001853002.1| hypothetical protein MMAR_4743 [Mycobacterium marinum M]
gi|183178037|gb|ACC43147.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=182
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (31%), Positives = 85/181 (47%), Gaps = 18/181 (9%)
Query 5 RVPLLPVDEAKAA----------ADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATML 54
R+P LP D+ A A D LS F NHP LA+ F +L
Sbjct 2 RLPPLPADQWDEAVQRSLSVILPAQRCNPRDAGNALSTFA---NHPALAKAFLRFNTHLL 58
Query 55 WHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAE 114
+ TL +R+REL I+R+ C YEWT H +A G+S D++ VR + + F E
Sbjct 59 FASTLPARVRELAILRVAHRRACAYEWTHHVALAEQAGISGDEIAAVRRGEATDDF---E 115
Query 115 QAVLAATDDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLE 174
+AVL D++ +S Q+W+A H D ++ V + + ++A ++ V LE
Sbjct 116 RAVLTGVDELDENSELSDQTWAALGE--HLDDRQRMDYVFTVGCYALLAMAFNTFGVQLE 173
Query 175 D 175
+
Sbjct 174 E 174
>gi|332286545|ref|YP_004418456.1| hypothetical protein PT7_3292 [Pusillimonas sp. T7-7]
gi|330430498|gb|AEC21832.1| hypothetical protein PT7_3292 [Pusillimonas sp. T7-7]
Length=174
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/146 (33%), Positives = 74/146 (51%), Gaps = 2/146 (1%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
L ++Q+LL P +AR + + L + H +L LRE+VIMRI L YE QH +A
Sbjct 29 LHLYQMLLQSPPIARGWLNHLTGIRHHNSLSGALREMVIMRIAHLNGAPYEADQHAPIAL 88
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVL 149
G++ L + W+G F E+AVLA TD + RE V + A + L
Sbjct 89 KEGMTQAQLDALPQWEGSELFSEQERAVLAYTDSMTREVQVPDAVFDAVRPFFEPRQ--L 146
Query 150 IELVTVISAWRMVASILHSLEVPLED 175
+EL ++ + MV+ L +L++ D
Sbjct 147 VELTATVATYNMVSRFLEALQIHSHD 172
>gi|317405991|gb|EFV86269.1| hypothetical protein HMPREF0005_02652 [Achromobacter xylosoxidans
C54]
Length=175
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/146 (33%), Positives = 77/146 (53%), Gaps = 1/146 (0%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
L ++Q+LL+ P +A + + L ++ TL +RELVIMR+ + YE QH +A
Sbjct 29 LHLYQMLLHSPAVAGGWLNYLTSIRQLSTLPGDIRELVIMRVAAINGAPYEADQHAPIAL 88
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVL 149
GVS L + DW+ F E+AVLA TD + R V + A + +K++
Sbjct 89 KEGVSQAQLDALPDWEASTLFSERERAVLAYTDAMTRHVQVPEPVFQAARAAMGSEKLI- 147
Query 150 IELVTVISAWRMVASILHSLEVPLED 175
+EL ++A+ MV+ L +L+V D
Sbjct 148 VELTATVAAYNMVSRFLEALQVHSHD 173
>gi|163857859|ref|YP_001632157.1| hypothetical protein Bpet3546 [Bordetella petrii DSM 12804]
gi|163261587|emb|CAP43889.1| conserved hypothetical protein [Bordetella petrii]
Length=175
Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/146 (33%), Positives = 78/146 (54%), Gaps = 1/146 (0%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
L ++Q+LL+ P +A + + L ++ TL LRELVIMR+ + YE QH +A
Sbjct 29 LHLYQMLLHSPAVAGGWLNYLTSIRQLSTLPGDLRELVIMRVAVINGAPYEADQHAPIAL 88
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVL 149
G++ L + W+ + F E+AVLA TD + R V + A + + DK ++
Sbjct 89 REGITQAQLDALDQWESSDQFNAGERAVLAYTDAMTRHVQVPQPVFDAARQAVGSDK-LM 147
Query 150 IELVTVISAWRMVASILHSLEVPLED 175
+EL ++A+ MV+ L +L+V D
Sbjct 148 VELTATVAAYNMVSRFLEALQVHSHD 173
>gi|302524899|ref|ZP_07277241.1| predicted protein [Streptomyces sp. AA4]
gi|302433794|gb|EFL05610.1| predicted protein [Streptomyces sp. AA4]
Length=301
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (31%), Positives = 88/175 (51%), Gaps = 7/175 (4%)
Query 2 TTSRVPLLPVDEAKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDS 61
TT R+P L +DE A ++ + A+ ++ QVL P L + L +L G L
Sbjct 5 TTPRIPPLELDEL--APEQQKLAKLGAD-TVIQVLARAPELMQASGALGGYLLGQGKLHP 61
Query 62 RLRELVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAAT 121
R+REL I+R+ D YEW H A G G + ++ + D + P + AVL A
Sbjct 62 RIRELAILRVALRCDAPYEWANHAPAALGGGATEAEIAALSDPAAS--WAPEDDAVLRAV 119
Query 122 DDVVREGAVSAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDG 176
D++ VS ++W+A D +IE++ ++ +RM+A L+S VP++ G
Sbjct 120 DELCANVFVSDETWAALAATR--DNAEIIEILFLVGYYRMMAGFLNSAGVPVKAG 172
>gi|108797613|ref|YP_637810.1| carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119866700|ref|YP_936652.1| carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126433237|ref|YP_001068928.1| carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
gi|108768032|gb|ABG06754.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119692789|gb|ABL89862.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126233037|gb|ABN96437.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
Length=178
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/164 (35%), Positives = 84/164 (52%), Gaps = 11/164 (6%)
Query 14 AKAAADEAGVPDYMAELSIFQVLLNHPRLARTFNDLLATMLWH-GTLDSRLRELVIMRIG 72
AKA A P + S+F VL H L F +L G L + ELVI+R+G
Sbjct 20 AKAGARAIRAPRF----SLFNVLGQHRLLFLAFLPYSGVLLGRLGKLSRQDAELVILRVG 75
Query 73 WLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYN--GFGPAEQAVLAATDDVVREGAV 130
L +C+YE QH R+A GV AD L R ++G + G ++ ++ ATD+ V V
Sbjct 76 HLRECEYELQQHRRLARSRGVGAD--LQARIFEGPDAEGLTDRQRVLVTATDEFVVTRGV 133
Query 131 SAQSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLE 174
S Q+WS R H K LIE + + + +A+ + +L+VPL+
Sbjct 134 SPQTWSVLAR--HLTKPQLIEFCLLAAHYDGLAATISTLQVPLD 175
>gi|158313468|ref|YP_001505976.1| carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
gi|158108873|gb|ABW11070.1| Carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
Length=190
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 80/150 (54%), Gaps = 2/150 (1%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
L+ L +HP+LA F + TL R RE++++R+ L C YEWTQH +
Sbjct 42 LNTLGTLAHHPKLAHAFFTFNGHIQRATTLTLRQREIIVLRVAALRKCYYEWTQHVVMGH 101
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVL 149
+G++ D++ + + P E A++ A D+++ EGA+ A +W +L D L
Sbjct 102 DIGLTDDEITRIALGPDAPFWDPVEAALIRAVDELLTEGAIGAGTWEILVAKL--DTQQL 159
Query 150 IELVTVISAWRMVASILHSLEVPLEDGVSS 179
++++ + A+ +A ++ S E+ L+D ++
Sbjct 160 LDIIFTVGAYETLALMMRSFELELDDDLTQ 189
>gi|311108164|ref|YP_003981017.1| alkylhydroperoxidase AhpD family core domain-containing protein
7 [Achromobacter xylosoxidans A8]
gi|310762853|gb|ADP18302.1| alkylhydroperoxidase AhpD family core domain protein 7 [Achromobacter
xylosoxidans A8]
Length=175
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/146 (33%), Positives = 78/146 (54%), Gaps = 1/146 (0%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
L ++Q+LL+ P +A + + L ++ TL LRELVIMR+ + YE QH +A
Sbjct 29 LHLYQMLLHSPAVAGGWLNYLTSIRQLSTLPGDLRELVIMRVAVINGAPYEADQHAPIAL 88
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVL 149
GVS L + W+ + F E+AVLA TD + R+ V + A + +K++
Sbjct 89 KEGVSQAQLDALDAWESSDLFDQREKAVLAYTDAMTRQVQVPEAVFQAARAAMGSEKLI- 147
Query 150 IELVTVISAWRMVASILHSLEVPLED 175
+EL ++A+ MV+ L +L+V D
Sbjct 148 VELTATVAAYNMVSRFLEALQVHSHD 173
>gi|302556061|ref|ZP_07308403.1| carboxymuconolactone decarboxylase [Streptomyces viridochromogenes
DSM 40736]
gi|302473679|gb|EFL36772.1| carboxymuconolactone decarboxylase [Streptomyces viridochromogenes
DSM 40736]
Length=201
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/147 (32%), Positives = 71/147 (49%), Gaps = 2/147 (1%)
Query 31 SIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVASG 90
+IF L+ HP L F +L G L LREL+I+R W T YEW +H +A
Sbjct 44 NIFTTLVRHPDLYEQFMPFGGQLLSRGRLPGELRELLILRTAWNTGARYEWGRHLPLARA 103
Query 91 LGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLI 150
GV+ D+ V + G+ ++ +L A D++ R +S +W A H LI
Sbjct 104 AGVTDADIDRVTEDPEAPGWTDLQRHLLRAADELSRSATMSDTTWEALAE--HFGDAELI 161
Query 151 ELVTVISAWRMVASILHSLEVPLEDGV 177
E+ ++ + MVA L++ V LE G
Sbjct 162 EITMLVGQYHMVAFFLNATGVELEPGF 188
>gi|338783594|gb|EGP47958.1| alkylhydroperoxidase AhpD family core domain-containing protein
7 [Achromobacter xylosoxidans AXX-A]
Length=175
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/146 (32%), Positives = 78/146 (54%), Gaps = 1/146 (0%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
L ++Q+LL+ P +A + + L ++ TL +RELVIMR+ + YE QH +A
Sbjct 29 LHLYQMLLHSPAVAGGWLNYLTSIRQLSTLPGDIRELVIMRVAAINGAPYEADQHAPIAL 88
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVL 149
G+S L + +W+ F E+AVLA TD + R+ V + A + +K++
Sbjct 89 KEGLSQAQLDALPEWEASTLFSERERAVLAYTDAMTRQVQVPEPVFQAARAAMGSEKLI- 147
Query 150 IELVTVISAWRMVASILHSLEVPLED 175
+EL ++A+ MV+ L +L+V D
Sbjct 148 VELTATVAAYNMVSRFLEALQVHSHD 173
>gi|288921071|ref|ZP_06415361.1| Carboxymuconolactone decarboxylase [Frankia sp. EUN1f]
gi|288347525|gb|EFC81812.1| Carboxymuconolactone decarboxylase [Frankia sp. EUN1f]
Length=200
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (31%), Positives = 79/147 (54%), Gaps = 4/147 (2%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
++ L +HP LA+ F ++ TL R REL+++R+ L C YEW QH +
Sbjct 42 MNTLGALAHHPALAQAFFTFNGHVIMATTLSERQRELLVLRVSTLRQCPYEWAQHVYMGR 101
Query 90 GLGVSADDLLGVRDWQGYNGF-GPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVV 148
G++ D+ +G W F P E A+L A D+++ +GA+S +W+ L D
Sbjct 102 DAGLT-DEEIGRIAWGPDAPFWTPLEAALLRAADELIADGAISVPTWAVLAEGL--DSQQ 158
Query 149 LIELVTVISAWRMVASILHSLEVPLED 175
L++++ + A+ +A ++ SLE+ L+D
Sbjct 159 LLDVIFTVGAYETIAWMMRSLELDLDD 185
>gi|271967553|ref|YP_003341749.1| carboxymuconolactone decarboxylase [Streptosporangium roseum
DSM 43021]
gi|270510728|gb|ACZ89006.1| carboxymuconolactone decarboxylase [Streptosporangium roseum
DSM 43021]
Length=179
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (34%), Positives = 81/146 (56%), Gaps = 7/146 (4%)
Query 31 SIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVASG 90
++F L HP L + + A +L+ GTL +R REL ++R YEW QH R+A
Sbjct 21 NVFTTLARHPALFQAWIGFGAALLY-GTLPARDRELAVLRTAHNRGSAYEWVQHVRLARE 79
Query 91 LGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSA-CERELHCDKVVL 149
G++ ++ VR +G+G ++ VL D++ R G ++ ++W A C R D+
Sbjct 80 AGLTEAEIEAVRGHG--HGWGAGDRLVLEVADEMHRSGDIADETWEALCAR---YDEPGR 134
Query 150 IELVTVISAWRMVASILHSLEVPLED 175
IELV +++ + M+A +L L VPLE+
Sbjct 135 IELVMLVAHYDMLAVVLTVLRVPLEE 160
>gi|91788017|ref|YP_548969.1| carboxymuconolactone decarboxylase [Polaromonas sp. JS666]
gi|91697242|gb|ABE44071.1| Carboxymuconolactone decarboxylase [Polaromonas sp. JS666]
Length=173
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/172 (32%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query 7 PLLPVDEAKAAADEAGVPDYMAELSI-FQVLLNHPRLARTFNDLLATMLWHGTLDSRLRE 65
P+ P + AA EAG+ +S+ +QVLLN P LA+ + LL + +L + LRE
Sbjct 5 PIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPADLRE 64
Query 66 LVIMRIGWLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQ---GYNGFGPAEQAVLAATD 122
++I+R+ L YE+ H A G+ + + +RD Q G GF E+ VLA TD
Sbjct 65 MIILRVAVLNRAPYEFEAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVLALTD 124
Query 123 DVVREGAVSAQSW---SACERELHCDKVVLIELVTVISAWRMVASILHSLEV 171
+ R+ V + C E LI+LV ++A+ MV+ L +L +
Sbjct 125 AMTRDIDVPDSVFDPIKPCFSEQQ-----LIDLVATVAAYNMVSRFLVALRI 171
>gi|29826970|ref|NP_821604.1| hypothetical protein SAV_429 [Streptomyces avermitilis MA-4680]
gi|29604067|dbj|BAC68139.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=205
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/167 (32%), Positives = 80/167 (48%), Gaps = 9/167 (5%)
Query 14 AKAAADEAG-VPDYMAELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIG 72
A AA D G +P+ IF L+ HP L F +L G L +RLREL+I+R
Sbjct 36 AGAAHDPGGRIPN------IFTTLVRHPDLYEQFMPFGGQLLRRGRLPARLRELLILRTS 89
Query 73 WLTDCDYEWTQHWRVASGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSA 132
T YEW +H +A GV+ D+ + + G+ E+ ++ A D++ +S
Sbjct 90 CNTGTRYEWGRHLTLAKAAGVTDGDINRITEGPEAPGWTDLERHLIRAADELNSGATLSD 149
Query 133 QSWSACERELHCDKVVLIELVTVISAWRMVASILHSLEVPLEDGVSS 179
+W A H LIE+V ++ + MVA L++ V L+ G S
Sbjct 150 ATWEALTE--HFGDAELIEIVMLVGQYHMVAFFLNATGVELDPGFDS 194
>gi|296169473|ref|ZP_06851093.1| carboxymuconolactone decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895739|gb|EFG75434.1| carboxymuconolactone decarboxylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=200
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/135 (34%), Positives = 69/135 (52%), Gaps = 4/135 (2%)
Query 29 ELSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVA 88
+ I +L HP +AR F +L G L RLREL I+R+ + W +H +VA
Sbjct 52 KFDIIGLLARHPEMARAFLTFNGFLLRRGELSPRLRELAILRVAKTRRSAFFWGEHTKVA 111
Query 89 SGLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVV 148
GV +D+ R +G GF + VLAATD+++ +G V A++W L D
Sbjct 112 VESGVPQEDI--TRLAEGNEGFSGVDLLVLAATDEMLADGRVQAETWEHLVAAL--DTHA 167
Query 149 LIELVTVISAWRMVA 163
+EL+ V+ + M+A
Sbjct 168 AMELIFVVGTYTMLA 182
>gi|333992142|ref|YP_004524756.1| hypothetical protein JDM601_3502 [Mycobacterium sp. JDM601]
gi|333488110|gb|AEF37502.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=181
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/145 (31%), Positives = 73/145 (51%), Gaps = 5/145 (3%)
Query 31 SIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVASG 90
S +L++HP+LAR F +L+ GTL +LREL I+R C+YEW H +
Sbjct 36 SAMTMLVHHPKLARAFLKFNVELLYRGTLPDKLRELAILRTAHRRGCEYEWVHHITIGKE 95
Query 91 LGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLI 150
G++ D + D Q QAVL A D++ + +S + + + H D+ L+
Sbjct 96 AGLTDAD---IEDLQHGAAGDVLHQAVLTAADELDEDSRLSPATEAILTQ--HLDEHQLM 150
Query 151 ELVTVISAWRMVASILHSLEVPLED 175
ELV + + M+A ++ V L++
Sbjct 151 ELVFTVGCYSMLAMAFNTFGVELDE 175
>gi|158315507|ref|YP_001508015.1| carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
gi|158110912|gb|ABW13109.1| Carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
Length=193
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (31%), Positives = 75/145 (52%), Gaps = 2/145 (1%)
Query 31 SIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVASG 90
++ L +P L F L+ +L +R REL+++R+ L +YEW QH +A
Sbjct 41 NLLGTLARYPALTIAFLRFNGHALYGTSLSARQRELLVLRVASLRQAEYEWAQHVVLAEA 100
Query 91 LGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLI 150
G+S D++ V + G+ P E A++ A +++ +GAV Q+W EL D+ L+
Sbjct 101 AGLSDDEIRRVTEGPDAAGWTPLESALVRAAGELIADGAVGDQTWKTLADEL--DEHQLM 158
Query 151 ELVTVISAWRMVASILHSLEVPLED 175
++V + + MVA L S V +D
Sbjct 159 DVVFTVGTYEMVAFALRSFGVEADD 183
>gi|91780988|ref|YP_556195.1| hypothetical protein Bxe_C0971 [Burkholderia xenovorans LB400]
gi|91693648|gb|ABE36845.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length=170
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/147 (32%), Positives = 79/147 (54%), Gaps = 13/147 (8%)
Query 30 LSIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVAS 89
L+++ +LL+ P + + LL + +L +R+RELVIMRI + DYE+ QH +A
Sbjct 29 LNLYSMLLHSPPVCAGWLALLTAIRQQSSLPARIRELVIMRIAIVNGADYEFQQHQPIAR 88
Query 90 GLGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSA-----CERELHC 144
+G++ ++ +R FG +QAVL D + RE V+ + + CERE
Sbjct 89 SVGINDAEIDALR-VPTLTVFGERDQAVLRYCDAMTREVHVADEVFKQVNAHFCERE--- 144
Query 145 DKVVLIELVTVISAWRMVASILHSLEV 171
++EL I+A+ +V+ L +L+V
Sbjct 145 ----IVELTATIAAYNLVSRFLEALQV 167
Lambda K H
0.320 0.135 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 183812957610
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40