BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1532c
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608670|ref|NP_216048.1| hypothetical protein Rv1532c [Mycob... 298 1e-79
gi|289757648|ref|ZP_06517026.1| conserved hypothetical protein [... 296 7e-79
gi|289745288|ref|ZP_06504666.1| conserved hypothetical protein [... 294 3e-78
gi|240167914|ref|ZP_04746573.1| hypothetical protein MkanA1_0127... 263 5e-69
gi|342857702|ref|ZP_08714358.1| hypothetical protein MCOL_02460 ... 105 3e-21
gi|304311378|ref|YP_003810976.1| hypothetical protein HDN1F_1744... 99.8 1e-19
gi|41408584|ref|NP_961420.1| hypothetical protein MAP2486 [Mycob... 90.5 8e-17
gi|118463843|ref|YP_880677.1| hypothetical protein MAV_1435 [Myc... 89.0 2e-16
gi|342858069|ref|ZP_08714725.1| hypothetical protein MCOL_04305 ... 88.6 3e-16
gi|183984105|ref|YP_001852396.1| hypothetical protein MMAR_4134 ... 85.9 2e-15
gi|254821266|ref|ZP_05226267.1| hypothetical protein MintA_15112... 84.7 4e-15
gi|297204619|ref|ZP_06922016.1| conserved hypothetical protein [... 84.7 4e-15
gi|118619198|ref|YP_907530.1| hypothetical protein MUL_3997 [Myc... 82.4 2e-14
gi|169631430|ref|YP_001705079.1| hypothetical protein MAB_4353 [... 76.3 1e-12
gi|54024791|ref|YP_119033.1| hypothetical protein nfa28220 [Noca... 75.5 2e-12
gi|118467813|ref|YP_889235.1| hypothetical protein MSMEG_4984 [M... 74.7 5e-12
gi|323699547|ref|ZP_08111459.1| thioesterase superfamily protein... 67.4 8e-10
gi|169630312|ref|YP_001703961.1| hypothetical protein MAB_3231 [... 67.0 9e-10
gi|94310524|ref|YP_583734.1| hypothetical protein Rmet_1582 [Cup... 66.6 1e-09
gi|206558860|ref|YP_002229620.1| thioesterase superfamily protei... 64.7 4e-09
gi|317404722|gb|EFV85110.1| hypothetical protein HMPREF0005_0498... 64.3 5e-09
gi|115353240|ref|YP_775079.1| hypothetical protein Bamb_3189 [Bu... 63.5 1e-08
gi|325521769|gb|EGD00514.1| phenylacetic acid degradation-relate... 63.2 1e-08
gi|311105524|ref|YP_003978377.1| thioesterase superfamily protei... 62.4 2e-08
gi|78067954|ref|YP_370723.1| phenylacetic acid degradation-relat... 62.4 2e-08
gi|107024066|ref|YP_622393.1| phenylacetic acid degradation-rela... 62.4 2e-08
gi|254774313|ref|ZP_05215829.1| hypothetical protein MaviaA2_065... 62.4 2e-08
gi|134297383|ref|YP_001121118.1| thioesterase superfamily protei... 62.0 3e-08
gi|335039462|ref|ZP_08532625.1| phenylacetic acid degradation-re... 62.0 3e-08
gi|171316377|ref|ZP_02905597.1| thioesterase superfamily protein... 61.6 4e-08
gi|119385590|ref|YP_916645.1| hypothetical protein Pden_2865 [Pa... 61.2 4e-08
gi|187478527|ref|YP_786551.1| thioesterase-like protein [Bordete... 61.2 5e-08
gi|293604742|ref|ZP_06687142.1| conserved hypothetical protein [... 61.2 5e-08
gi|167585069|ref|ZP_02377457.1| uncharacterized domain 1 [Burkho... 60.8 5e-08
gi|260425687|ref|ZP_05779667.1| thioesterase family protein [Cit... 60.8 7e-08
gi|186474798|ref|YP_001856268.1| thioesterase superfamily protei... 60.5 8e-08
gi|170697723|ref|ZP_02888810.1| thioesterase superfamily protein... 60.1 9e-08
gi|261602797|gb|ACX92400.1| thioesterase superfamily protein [Su... 59.7 1e-07
gi|284175310|ref|ZP_06389279.1| hypothetical protein Ssol98_1178... 59.7 2e-07
gi|338780128|gb|EGP44546.1| thioesterase superfamily protein 6 [... 58.9 3e-07
gi|319764964|ref|YP_004128901.1| thioesterase superfamily protei... 58.5 3e-07
gi|189348986|ref|YP_001944614.1| phenylacetic acid degradation-r... 57.8 5e-07
gi|161526300|ref|YP_001581312.1| thioesterase superfamily protei... 57.8 5e-07
gi|83721650|ref|YP_440680.1| hypothetical protein BTH_I0121 [Bur... 57.8 6e-07
gi|15898097|ref|NP_342702.1| hypothetical protein SSO1253 [Sulfo... 57.8 6e-07
gi|333372073|ref|ZP_08464009.1| hypothetical protein HMPREF9374_... 57.4 6e-07
gi|167834971|ref|ZP_02461854.1| uncharacterized domain 1, putati... 57.0 8e-07
gi|167561021|ref|ZP_02353937.1| uncharacterized domain 1, putati... 57.0 9e-07
gi|114798994|ref|YP_760177.1| thioesterase family protein [Hypho... 57.0 9e-07
gi|33596270|ref|NP_883913.1| hypothetical protein BPP1634 [Borde... 57.0 1e-06
>gi|15608670|ref|NP_216048.1| hypothetical protein Rv1532c [Mycobacterium tuberculosis H37Rv]
gi|15840999|ref|NP_336036.1| hypothetical protein MT1583 [Mycobacterium tuberculosis CDC1551]
gi|31792718|ref|NP_855211.1| hypothetical protein Mb1559c [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=144
Score = 298 bits (764), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH
Sbjct 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
Query 61 GGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
GGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT
Sbjct 61 GGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
Query 121 FTEITATDPDGNIVAHAVQTYRIV 144
FTEITATDPDGNIVAHAVQTYRIV
Sbjct 121 FTEITATDPDGNIVAHAVQTYRIV 144
>gi|289757648|ref|ZP_06517026.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294996499|ref|ZP_06802190.1| HGG motif-containing thioesterase, possibly involved in aromatic
compounds catabolism [Mycobacterium tuberculosis 210]
gi|289713212|gb|EFD77224.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|326903162|gb|EGE50095.1| hypothetical protein TBPG_01026 [Mycobacterium tuberculosis W-148]
gi|339294508|gb|AEJ46619.1| hypothetical protein CCDC5079_1429 [Mycobacterium tuberculosis
CCDC5079]
gi|339298144|gb|AEJ50254.1| hypothetical protein CCDC5180_1417 [Mycobacterium tuberculosis
CCDC5180]
Length=144
Score = 296 bits (758), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 143/144 (99%), Positives = 143/144 (99%), Gaps = 0/144 (0%)
Query 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH
Sbjct 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
Query 61 GGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
GGVIASVMDTAGAAA WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT
Sbjct 61 GGVIASVMDTAGAAAPWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
Query 121 FTEITATDPDGNIVAHAVQTYRIV 144
FTEITATDPDGNIVAHAVQTYRIV
Sbjct 121 FTEITATDPDGNIVAHAVQTYRIV 144
>gi|289745288|ref|ZP_06504666.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289685816|gb|EFD53304.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=144
Score = 294 bits (752), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/144 (99%), Positives = 142/144 (99%), Gaps = 0/144 (0%)
Query 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH
Sbjct 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
Query 61 GGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
GGVIASVMDTAGAAA WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT
Sbjct 61 GGVIASVMDTAGAAAPWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
Query 121 FTEITATDPDGNIVAHAVQTYRIV 144
FT ITATDPDGNIVAHAVQTYRIV
Sbjct 121 FTAITATDPDGNIVAHAVQTYRIV 144
>gi|240167914|ref|ZP_04746573.1| hypothetical protein MkanA1_01270 [Mycobacterium kansasii ATCC
12478]
Length=144
Score = 263 bits (673), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 123/144 (86%), Positives = 136/144 (95%), Gaps = 0/144 (0%)
Query 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
M++PLTA++QH+RRQAVR+LM TPF+GGLGIVFERYEPDDV IRLPFR DLTNDGTYFH
Sbjct 1 MAEPLTAEQQHQRRQAVRDLMTSTPFMGGLGIVFERYEPDDVTIRLPFRDDLTNDGTYFH 60
Query 61 GGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
GGVIASV+DTAGAAAAWSNHDFD+G RAATVA+SIQYTGAAKR DLLCHART RRRKELT
Sbjct 61 GGVIASVIDTAGAAAAWSNHDFDKGMRAATVALSIQYTGAAKRSDLLCHARTTRRRKELT 120
Query 121 FTEITATDPDGNIVAHAVQTYRIV 144
FTEITATD DG++VAHA+QTYRIV
Sbjct 121 FTEITATDADGSVVAHAIQTYRIV 144
>gi|342857702|ref|ZP_08714358.1| hypothetical protein MCOL_02460 [Mycobacterium colombiense CECT
3035]
gi|342135035|gb|EGT88201.1| hypothetical protein MCOL_02460 [Mycobacterium colombiense CECT
3035]
Length=128
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/127 (41%), Positives = 77/127 (61%), Gaps = 2/127 (1%)
Query 20 LMPRTPFIGGLGIVFERYEPDD--VVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAW 77
+ + PF+ LG+ +E ++ VV+R+P+ + N G HGG IA+++DT GAAA W
Sbjct 1 MFGKVPFVSALGLELVDWETEEGRVVVRMPYTELVDNGGGTPHGGAIATLLDTTGAAAVW 60
Query 78 SNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHA 137
+ HD+ RGTR +TV++++ Y G+ + ++ R RR KEL F + A G VA A
Sbjct 61 NGHDYSRGTRGSTVSLTVNYLGSPRDEAVVATGRCVRRAKELNFATVDAVSESGRPVASA 120
Query 138 VQTYRIV 144
V TYRIV
Sbjct 121 VLTYRIV 127
>gi|304311378|ref|YP_003810976.1| hypothetical protein HDN1F_17440 [gamma proteobacterium HdN1]
gi|301797111|emb|CBL45327.1| Hypothetical protein HDN1F_17440 [gamma proteobacterium HdN1]
Length=137
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/126 (39%), Positives = 72/126 (58%), Gaps = 1/126 (0%)
Query 19 ELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWS 78
++ P PF LGI D V+ LP+R DL G FHGG I+S++D GA AAWS
Sbjct 11 QMFPEVPFQKLLGIEIVEVVTDRAVVCLPYRGDLAGGGNAFHGGAISSLLDLTGALAAWS 70
Query 79 NHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGN-IVAHA 137
HD G +AATV+M++ Y AA D++ A +R +EL F+E++ + + ++A+
Sbjct 71 GHDPKNGMKAATVSMTVNYLAAALGKDIIATANAVKRGRELIFSEVSIREKGSDKLIANG 130
Query 138 VQTYRI 143
YRI
Sbjct 131 SMIYRI 136
>gi|41408584|ref|NP_961420.1| hypothetical protein MAP2486 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396942|gb|AAS04803.1| hypothetical protein MAP_2486 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=148
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/130 (35%), Positives = 69/130 (54%), Gaps = 0/130 (0%)
Query 14 RQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGA 73
R + + +P++PF+ LGIV ER + D+V +RLP+ G HGG IA++ D
Sbjct 18 RDVIAQFLPQSPFVVKLGIVAERLDEDEVRLRLPWDPSNVTIGDMVHGGAIATLADLTVM 77
Query 74 AAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNI 133
AAAW R TV+M++ + A+ D++ R RR + L E DP G +
Sbjct 78 AAAWCGAQAPPQLRGVTVSMALDFMAPARASDVIGVGRVLRRGRSLVNCEAEIVDPQGTL 137
Query 134 VAHAVQTYRI 143
VA A+ TY++
Sbjct 138 VAKALATYKV 147
>gi|118463843|ref|YP_880677.1| hypothetical protein MAV_1435 [Mycobacterium avium 104]
gi|118165130|gb|ABK66027.1| conserved hypothetical protein, putative [Mycobacterium avium
104]
gi|336458536|gb|EGO37506.1| hypothetical protein MAPs_12190 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=129
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/127 (35%), Positives = 68/127 (54%), Gaps = 0/127 (0%)
Query 17 VRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAA 76
+ + +P++PF+ LGIV ER + D+V +RLP+ G HGG IA++ D AAA
Sbjct 2 IAQFLPQSPFVVKLGIVAERLDEDEVRLRLPWDPSNVTIGDMVHGGAIATLADLTVMAAA 61
Query 77 WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAH 136
W R TV+M++ + A+ D++ R RR + L E DP G +VA
Sbjct 62 WCGAQAPPQLRGVTVSMALDFMAPARASDVIGVGRVLRRGRSLVNCEAEIVDPQGTLVAK 121
Query 137 AVQTYRI 143
A+ TY++
Sbjct 122 ALATYKV 128
>gi|342858069|ref|ZP_08714725.1| hypothetical protein MCOL_04305 [Mycobacterium colombiense CECT
3035]
gi|342135402|gb|EGT88568.1| hypothetical protein MCOL_04305 [Mycobacterium colombiense CECT
3035]
Length=146
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/130 (34%), Positives = 69/130 (54%), Gaps = 0/130 (0%)
Query 14 RQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGA 73
R + + +P++PF+ LGIV +R E D+V +RLP+ G HGG IA++ D
Sbjct 16 RDVIAQFLPQSPFVVKLGIVADRLEEDEVRLRLPWDPSNVTLGDMVHGGAIATLADLTVM 75
Query 74 AAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNI 133
AAAW R TV++++ + A+ D++ R RR + L E DP G +
Sbjct 76 AAAWCGAQAPPELRGVTVSLTLDFMAPARATDVIGVGRVLRRGRSLVNCEAEIVDPQGTL 135
Query 134 VAHAVQTYRI 143
VA A+ TY++
Sbjct 136 VAKALATYKV 145
>gi|183984105|ref|YP_001852396.1| hypothetical protein MMAR_4134 [Mycobacterium marinum M]
gi|183177431|gb|ACC42541.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=144
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/143 (31%), Positives = 74/143 (52%), Gaps = 0/143 (0%)
Query 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
MS+ + + R + + +P++PF+ LGIV + D+V +RLP+ G H
Sbjct 1 MSNASGSADNASGRDVIAQFLPQSPFVTKLGIVADHLGADEVRLRLPWDPSNVTIGDMVH 60
Query 61 GGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
GG IA++ D AAAW + R TV++++ + A+ D++ R RR + L
Sbjct 61 GGAIATLADLTVMAAAWCSGQAPPELRGVTVSLALDFMAPARATDVIGVGRVLRRGRSLV 120
Query 121 FTEITATDPDGNIVAHAVQTYRI 143
E DP+G ++A A+ TY++
Sbjct 121 NCEAEIVDPEGTLLAKALATYKV 143
>gi|254821266|ref|ZP_05226267.1| hypothetical protein MintA_15112 [Mycobacterium intracellulare
ATCC 13950]
Length=129
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/127 (35%), Positives = 67/127 (53%), Gaps = 0/127 (0%)
Query 17 VRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAA 76
+ + +P++PF+ LGIV +R E D+V +RLP+ G HGG IA++ D AAA
Sbjct 2 IAQFLPQSPFVVKLGIVADRLEEDEVRLRLPWDPSNVTLGDMVHGGAIATLADLTVMAAA 61
Query 77 WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAH 136
W R TV+M++ Y A+ D++ R RR + L E D G +VA
Sbjct 62 WCGVPAPPELRGVTVSMALDYMAPARATDVIGIGRVLRRGRSLVNCEAEIVDSGGTLVAK 121
Query 137 AVQTYRI 143
A+ TY++
Sbjct 122 ALATYKV 128
>gi|297204619|ref|ZP_06922016.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297148738|gb|EDY54720.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=163
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/132 (40%), Positives = 73/132 (56%), Gaps = 2/132 (1%)
Query 5 LTAQEQHKRRQAVRELMPR-TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGV 63
LT QEQ +RR R R F I R+E D V I LP+ L+ FHGGV
Sbjct 8 LTDQEQRERRAWFRARWERGVAFNRRCRIRVTRWEADGVEIVLPYAESLSAHEDVFHGGV 67
Query 64 IASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTE 123
I++++DTAGA A + HDF +G+R +TV+MS+QY A+ + + +AR RR + F +
Sbjct 68 ISALIDTAGAGAVIAGHDFTKGSRLSTVSMSVQYLAPARGREAVAYARCVRRGGRVHFAD 127
Query 124 ITATDPDGNIVA 135
+ DG I A
Sbjct 128 VD-VRADGRICA 138
>gi|118619198|ref|YP_907530.1| hypothetical protein MUL_3997 [Mycobacterium ulcerans Agy99]
gi|118571308|gb|ABL06059.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=144
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/143 (30%), Positives = 73/143 (52%), Gaps = 0/143 (0%)
Query 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
MS+ + + R + + +P++PF+ LGIV + D+V +RLP+ G H
Sbjct 1 MSNASGSADNASGRDVIAQFLPQSPFVTKLGIVADHLGADEVRLRLPWDPSNVTIGDMVH 60
Query 61 GGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
GG IA++ D AAAW + R TV++++ + A+ D++ R RR + L
Sbjct 61 GGAIATLADLTVMAAAWCSGQAPPELRGVTVSLALDFMAPARATDVIGVGRVLRRGRSLV 120
Query 121 FTEITATDPDGNIVAHAVQTYRI 143
DP+G ++A A+ TY++
Sbjct 121 NCGAEIVDPEGTLLAKALATYQV 143
>gi|169631430|ref|YP_001705079.1| hypothetical protein MAB_4353 [Mycobacterium abscessus ATCC 19977]
gi|169243397|emb|CAM64425.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=150
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/123 (31%), Positives = 63/123 (52%), Gaps = 0/123 (0%)
Query 21 MPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWSNH 80
+P +PF+ L I E+ D+ V+R+P+R +L HGG IA++ D +AW
Sbjct 27 LPVSPFVELLDIRAEKLTDDEAVLRMPWRPELATTADMVHGGAIAALADITAMVSAWCGR 86
Query 81 DFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQT 140
+ R T ++++++ A+ DLL R RR K LT E+ G VA A+ +
Sbjct 87 ELPEQLRGVTTSLALEFLEPARAEDLLGTGRALRRGKTLTACEVDIVTVAGTRVAKALAS 146
Query 141 YRI 143
Y++
Sbjct 147 YKV 149
>gi|54024791|ref|YP_119033.1| hypothetical protein nfa28220 [Nocardia farcinica IFM 10152]
gi|54016299|dbj|BAD57669.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=144
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/129 (31%), Positives = 65/129 (51%), Gaps = 0/129 (0%)
Query 15 QAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAA 74
+ +R +P++PF+ LG+ E D+ +RLP+R +L HGG IA++ D A
Sbjct 15 ELMRLFVPQSPFVRLLGVRIEELTDDEAALRLPWRPELATVEDMVHGGAIAALADMTVMA 74
Query 75 AAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIV 134
AAW + R T ++++++ A+ DL+ R RR LT E+ G V
Sbjct 75 AAWCGRELPGELRGVTTSLAMEFLQPARAEDLIGRGRPLRRGATLTAREVDIVTASGTHV 134
Query 135 AHAVQTYRI 143
A A+ Y++
Sbjct 135 AKALANYKV 143
>gi|118467813|ref|YP_889235.1| hypothetical protein MSMEG_4984 [Mycobacterium smegmatis str.
MC2 155]
gi|118169100|gb|ABK69996.1| conserved hypothetical protein, putative [Mycobacterium smegmatis
str. MC2 155]
Length=134
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (48%), Gaps = 0/125 (0%)
Query 19 ELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWS 78
+ +P +P + LGIV E V +R+P+ HGG IA++ D A AW+
Sbjct 9 QFLPTSPLVAKLGIVAENLADGQVRLRMPWDPSNATIADMVHGGAIATLADVTVMATAWA 68
Query 79 NHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAV 138
+ R TV+MS+QY A+ DL+ RR L ++ PD VA AV
Sbjct 69 GAEVPGELRGVTVSMSLQYLAPARATDLIGVGHVLRRGHSLVHCDVDVHTPDDTPVAKAV 128
Query 139 QTYRI 143
TY++
Sbjct 129 ATYKL 133
>gi|323699547|ref|ZP_08111459.1| thioesterase superfamily protein [Desulfovibrio sp. ND132]
gi|323459479|gb|EGB15344.1| thioesterase superfamily protein [Desulfovibrio desulfuricans
ND132]
Length=136
Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/116 (38%), Positives = 59/116 (51%), Gaps = 4/116 (3%)
Query 30 LGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWSNHDFDRGTRAA 89
LGIV + EPD V+RLPFR +LT GGV+A+++D A A + G R
Sbjct 23 LGIVVDSIEPDRAVLRLPFRPELTQGARMVAGGVLATLLDETMAHAVLGGN--RPGERTT 80
Query 90 TVAMSIQYTGAAKR-CDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQTYRIV 144
TV +S+ Y A K DL C AR +R + F E A D VA A ++ ++
Sbjct 81 TVDLSVSYLRAVKPGSDLTCEARVVKRGGRVLFVE-AAVSSDDREVARATASFLLL 135
>gi|169630312|ref|YP_001703961.1| hypothetical protein MAB_3231 [Mycobacterium abscessus ATCC 19977]
gi|169242279|emb|CAM63307.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=135
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/130 (34%), Positives = 67/130 (52%), Gaps = 0/130 (0%)
Query 13 RRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
R + + + +P +P LGI D V+ +PF+++L G HGG IA++ DTA
Sbjct 4 RTEIITQFVPNSPLCQHLGITLTEIGDDRAVLHMPFKSELATMGQTVHGGAIATLADTAA 63
Query 73 AAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGN 132
AAAW++ AT ++++ Y AA DL + RR K L+ E+T D G
Sbjct 64 MAAAWADDVVPEKFGGATASLAVNYVCAANAADLTAVGQVVRRGKRLSNIEVTVCDSAGQ 123
Query 133 IVAHAVQTYR 142
+VA A+ TY
Sbjct 124 VVAKALATYN 133
>gi|94310524|ref|YP_583734.1| hypothetical protein Rmet_1582 [Cupriavidus metallidurans CH34]
gi|93354376|gb|ABF08465.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length=146
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (33%), Positives = 64/131 (49%), Gaps = 3/131 (2%)
Query 17 VRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAA 76
+ ++ +P LGI + + V + LPF G H GVIA+++D AGAAAA
Sbjct 16 IESVLIASPVAQALGIRLDALGAERVEMLLPFSMKNITVGDIVHAGVIATLIDVAGAAAA 75
Query 77 WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITA---TDPDGNI 133
+S D D AT ++SIQY A+ L A RR K TE++ D + +
Sbjct 76 FSKVDLDVVKTGATGSLSIQYLAPARAASLRAVAEVIRRGKRQVATEVSVYAEGDAEAVL 135
Query 134 VAHAVQTYRIV 144
VA A+ + ++
Sbjct 136 VAKALMSTALI 146
>gi|206558860|ref|YP_002229620.1| thioesterase superfamily protein [Burkholderia cenocepacia J2315]
gi|198034897|emb|CAR50769.1| thioesterase superfamily protein [Burkholderia cenocepacia J2315]
Length=134
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/132 (34%), Positives = 62/132 (47%), Gaps = 4/132 (3%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ LG+V D V +RLPF + + G G V + DTA
Sbjct 4 NAVRELLDRLLAPWVRSLGLVPVSIGDDSVTLRLPFSGEFRHSGGIICGQVFTAAADTAM 63
Query 73 AAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGN 132
A S R TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 64 VVAISSALGEFRPM--TTVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDGK 121
Query 133 IVAHAVQTYRIV 144
I HA TY +V
Sbjct 122 IAVHATSTYALV 133
>gi|317404722|gb|EFV85110.1| hypothetical protein HMPREF0005_04982 [Achromobacter xylosoxidans
C54]
Length=141
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/120 (36%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query 25 PFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWSNHDFDR 84
PF+ LG+V E+ P LP+R DLTN HGG + SV+D +AAA + D
Sbjct 18 PFMSFLGLVPEQIAPAYARTSLPWRQDLTNSRGDVHGGTLMSVLDFTLSAAARGSADATE 77
Query 85 GTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQTYRIV 144
G AT+ M+ + DL+ AR RR + F E DG +VA A T++I+
Sbjct 78 GM--ATIDMNTTFLSPGT-GDLVIEARCLRRGASIAFCEGDIRRADGELVARATATFKII 134
>gi|115353240|ref|YP_775079.1| hypothetical protein Bamb_3189 [Burkholderia ambifaria AMMD]
gi|172062112|ref|YP_001809764.1| thioesterase superfamily protein [Burkholderia ambifaria MC40-6]
gi|115283228|gb|ABI88745.1| uncharacterized protein [Burkholderia ambifaria AMMD]
gi|171994629|gb|ACB65548.1| thioesterase superfamily protein [Burkholderia ambifaria MC40-6]
Length=134
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/133 (34%), Positives = 65/133 (49%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ LG+V D V +RLPF + + G G V + DTA
Sbjct 4 NAVRELLDRLLAPWVRSLGLVPVSIGDDSVTMRLPFSGEFRHSGGIICGQVFTAAADTAM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + S +F T TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 64 VVAISVSLGEFRPMT---TVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDG 120
Query 132 NIVAHAVQTYRIV 144
+ HA TY +V
Sbjct 121 KMAVHATSTYALV 133
>gi|325521769|gb|EGD00514.1| phenylacetic acid degradation-related protein [Burkholderia sp.
TJI49]
Length=134
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (33%), Positives = 66/133 (50%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ L +V + D V +RLPF + + G G V + DTA
Sbjct 4 NAVRELLNRLLAPWVRSLNLVPVSIDDDSVTLRLPFSGEFRHSGGGICGQVFTAAADTAM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 64 VVAISAALGEFRPMT---TVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDG 120
Query 132 NIVAHAVQTYRIV 144
N+ HA TY +V
Sbjct 121 NMAVHATSTYALV 133
>gi|311105524|ref|YP_003978377.1| thioesterase superfamily protein 6 [Achromobacter xylosoxidans
A8]
gi|310760213|gb|ADP15662.1| thioesterase superfamily protein 6 [Achromobacter xylosoxidans
A8]
Length=140
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 59/120 (50%), Gaps = 3/120 (2%)
Query 25 PFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWSNHDFDR 84
PF+ +G+V E P LP+R DLTN HGG + SV+D +AAA + D
Sbjct 17 PFMHFVGLVPESIAPAYARTSLPWRADLTNSRGDVHGGTLMSVLDFTLSAAARGSADGTE 76
Query 85 GTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQTYRIV 144
G AT+ M+ + DL+ AR RR + F E DG +VA A T++I+
Sbjct 77 GM--ATIDMNTSFLSPGT-GDLVIEARCLRRGASIAFCEGEVRRADGELVARATATFKII 133
>gi|78067954|ref|YP_370723.1| phenylacetic acid degradation-related protein [Burkholderia sp.
383]
gi|77968699|gb|ABB10079.1| Phenylacetic acid degradation-related protein [Burkholderia sp.
383]
Length=153
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (33%), Positives = 65/133 (49%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ LG+V D V +RLPF + + G G V + DTA
Sbjct 23 NAVRELLDRLLAPWVRSLGLVPVSIGDDSVTLRLPFSGEFRHSGGIICGQVFTAAADTAM 82
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 83 VVAISAALGEFRPMT---TVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDG 139
Query 132 NIVAHAVQTYRIV 144
+ HA TY +V
Sbjct 140 KMAVHATSTYALV 152
>gi|107024066|ref|YP_622393.1| phenylacetic acid degradation-related protein [Burkholderia cenocepacia
AU 1054]
gi|116691152|ref|YP_836775.1| hypothetical protein Bcen2424_3134 [Burkholderia cenocepacia
HI2424]
gi|170734483|ref|YP_001766430.1| thioesterase superfamily protein [Burkholderia cenocepacia MC0-3]
gi|254246857|ref|ZP_04940178.1| Phenylacetic acid degradation-related protein [Burkholderia cenocepacia
PC184]
gi|105894255|gb|ABF77420.1| Phenylacetic acid degradation-related protein [Burkholderia cenocepacia
AU 1054]
gi|116649241|gb|ABK09882.1| uncharacterized domain 1 [Burkholderia cenocepacia HI2424]
gi|124871633|gb|EAY63349.1| Phenylacetic acid degradation-related protein [Burkholderia cenocepacia
PC184]
gi|169817725|gb|ACA92308.1| thioesterase superfamily protein [Burkholderia cenocepacia MC0-3]
Length=134
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (33%), Positives = 65/133 (49%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ LG+V D V +RLPF + + G G V + DTA
Sbjct 4 NAVRELLDRLLAPWVRSLGLVPVSIGDDSVTLRLPFSGEFRHSGGIICGQVFTAAADTAM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 64 VVAISAALGEFRPMT---TVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDG 120
Query 132 NIVAHAVQTYRIV 144
+ HA TY +V
Sbjct 121 KMAVHATSTYALV 133
>gi|254774313|ref|ZP_05215829.1| hypothetical protein MaviaA2_06550 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=90
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/86 (35%), Positives = 47/86 (55%), Gaps = 0/86 (0%)
Query 17 VRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAA 76
+ + +P++PF+ LGIV ER + D+V +RLP+ G HGG IA++ D AAA
Sbjct 2 IAQFLPQSPFVVKLGIVAERLDEDEVRLRLPWDPSNVTIGDMVHGGAIATLADLTVMAAA 61
Query 77 WSNHDFDRGTRAATVAMSIQYTGAAK 102
W R TV+M++ + A+
Sbjct 62 WCGAQAPPQLRGVTVSMALDFMAPAR 87
>gi|134297383|ref|YP_001121118.1| thioesterase superfamily protein [Burkholderia vietnamiensis
G4]
gi|134140540|gb|ABO56283.1| thioesterase superfamily protein [Burkholderia vietnamiensis
G4]
Length=134
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/133 (33%), Positives = 65/133 (49%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ LG+V D V +RLPF + + G G V + DTA
Sbjct 4 NAVRELLDRLLAPWVRSLGLVPVSIGDDSVTMRLPFSGEFRHSGGIICGQVFTAAADTAM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 64 VVAISAALGEFRPMT---TVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDG 120
Query 132 NIVAHAVQTYRIV 144
+ HA TY +V
Sbjct 121 KMAVHATSTYALV 133
>gi|335039462|ref|ZP_08532625.1| phenylacetic acid degradation-related protein [Caldalkalibacillus
thermarum TA2.A1]
gi|334180655|gb|EGL83257.1| phenylacetic acid degradation-related protein [Caldalkalibacillus
thermarum TA2.A1]
Length=136
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/128 (29%), Positives = 58/128 (46%), Gaps = 4/128 (3%)
Query 17 VRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAA 76
VR L +PF +G +R+E DV++ LP R +L N HGGV AS++DT
Sbjct 8 VRRLFENSPFFQFIGFQVKRFEEGDVILELPVRDELLNVNQTLHGGVYASLLDTVIGLTI 67
Query 77 WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAH 136
S AT+ M I Y + L+ A + + E D +G ++A
Sbjct 68 RS----IVKQPLATINMHIHYFAPVREGKLVAKANVIQHGYRIVSAEGEIADEEGRLLAK 123
Query 137 AVQTYRIV 144
+ T++++
Sbjct 124 GMATFKVL 131
>gi|171316377|ref|ZP_02905597.1| thioesterase superfamily protein [Burkholderia ambifaria MEX-5]
gi|171098506|gb|EDT43308.1| thioesterase superfamily protein [Burkholderia ambifaria MEX-5]
Length=134
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/133 (33%), Positives = 65/133 (49%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ LG+V D V +RLPF + + G G V + DTA
Sbjct 4 NAVRELLDRLLAPWVRSLGLVPVAIGDDSVTMRLPFSGEFRHSGGIICGQVFTAAADTAM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 64 VVAISVALGEFRPMT---TVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDG 120
Query 132 NIVAHAVQTYRIV 144
+ HA TY +V
Sbjct 121 KMAVHATSTYALV 133
>gi|119385590|ref|YP_916645.1| hypothetical protein Pden_2865 [Paracoccus denitrificans PD1222]
gi|119376185|gb|ABL70949.1| hypothetical protein Pden_2865 [Paracoccus denitrificans PD1222]
Length=167
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/103 (36%), Positives = 54/103 (53%), Gaps = 4/103 (3%)
Query 1 MSDPLTAQEQHKRRQAVRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTND--GTY 58
MS+PL E +RR+ R+ + P LG+ ++ P+ I LP+R DL D
Sbjct 21 MSEPLPEDELEQRRRIARQFIEVIPHARALGMRLDQLSPEGAEISLPWREDLVGDPRSGV 80
Query 59 FHGGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAA 101
HGGVI+++MDT AA ++ R T AT+ + I Y AA
Sbjct 81 IHGGVISALMDTCSGAAVMAHPAGARST--ATIDLRIDYMRAA 121
>gi|187478527|ref|YP_786551.1| thioesterase-like protein [Bordetella avium 197N]
gi|115423113|emb|CAJ49644.1| thioesterase-related protein [Bordetella avium 197N]
Length=136
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/120 (35%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query 25 PFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWSNHDFDR 84
P + LG++ E E RLP+R +LTN + HGG + +V+D +AAA H D
Sbjct 14 PLMDYLGLIPESAENGVARCRLPWRRELTNSRGHVHGGTMMAVLDFTLSAAA-RGHRLDL 72
Query 85 GTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQTYRIV 144
G AT+ MS + DL+ AR R+ + F E D G +VA A T+++V
Sbjct 73 GM--ATIDMSTSFM-TPGMGDLVIEARCLRKGSSIAFCEGEIRDEQGELVAKASATFKLV 129
>gi|293604742|ref|ZP_06687142.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292816911|gb|EFF75992.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length=138
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/120 (35%), Positives = 59/120 (50%), Gaps = 3/120 (2%)
Query 25 PFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWSNHDFDR 84
PF+ +G+V E P LP+R DLTN HGG + S++D +AAA + D
Sbjct 15 PFMHFIGLVPESIAPAYARTTLPWRQDLTNSRGDVHGGTLMSILDFTLSAAARGSADATE 74
Query 85 GTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQTYRIV 144
G AT+ M+ + DL+ AR RR + F E DG +VA A T++I+
Sbjct 75 GM--ATIDMNTTFLSPGT-GDLVIEARCLRRGASIAFCEGDVRRADGELVARATATFKII 131
>gi|167585069|ref|ZP_02377457.1| uncharacterized domain 1 [Burkholderia ubonensis Bu]
Length=134
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/132 (31%), Positives = 61/132 (47%), Gaps = 4/132 (3%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ LG+V D + +RLPF + + G G V + DTA
Sbjct 4 NAVRELLDRLLAPWVRSLGLVPVSIADDSITLRLPFSGEFRHSGGVICGQVFTAAADTAM 63
Query 73 AAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGN 132
A S R TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 64 VVAISSALGEFRPM--TTVSLNTNFMRPVRKGDVLITARVLRMGRNLVFGEVELFDEDGK 121
Query 133 IVAHAVQTYRIV 144
+ HA Y ++
Sbjct 122 MAVHATSAYALI 133
>gi|260425687|ref|ZP_05779667.1| thioesterase family protein [Citreicella sp. SE45]
gi|260423627|gb|EEX16877.1| thioesterase family protein [Citreicella sp. SE45]
Length=131
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/122 (32%), Positives = 55/122 (46%), Gaps = 2/122 (1%)
Query 22 PRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMD-TAGAAAAWSNH 80
P +PF LG + D +P R L N HGG IA+++D T G WS
Sbjct 7 PPSPFAQHLGYDLVAWREDYARYEMPIRPFLENRQGIPHGGAIATLLDSTMGLCGLWSGD 66
Query 81 DFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQT 140
+R T+++++QY G AK L+C AR + F E TD G +VA
Sbjct 67 AAER-RMGLTLSLNVQYIGQAKGTKLICEARKTGGGRTTFFAEGEITDDTGQLVAKGTGV 125
Query 141 YR 142
+R
Sbjct 126 FR 127
>gi|186474798|ref|YP_001856268.1| thioesterase superfamily protein [Burkholderia phymatum STM815]
gi|184191257|gb|ACC69222.1| thioesterase superfamily protein [Burkholderia phymatum STM815]
Length=134
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/131 (31%), Positives = 65/131 (50%), Gaps = 6/131 (4%)
Query 17 VRELMPRT--PFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAA 74
VREL+ R P++ L + + + + +RLPF +L + G G V + DTA
Sbjct 6 VRELLDRVLAPWVRALSLTPVKVDDESATLRLPFSGELRHSGGVICGQVFMAAADTAMVV 65
Query 75 A-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNI 133
A + + F T TV+++I + A ++ D+L AR R + L F E+ D DG +
Sbjct 66 AISAALGGFKPMT---TVSLNISFMRAVRKGDVLIMARVLRMGRNLVFGEVELIDEDGKM 122
Query 134 VAHAVQTYRIV 144
HA TY ++
Sbjct 123 AVHATTTYALL 133
>gi|170697723|ref|ZP_02888810.1| thioesterase superfamily protein [Burkholderia ambifaria IOP40-10]
gi|170137338|gb|EDT05579.1| thioesterase superfamily protein [Burkholderia ambifaria IOP40-10]
Length=134
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/133 (32%), Positives = 64/133 (49%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ LG+V D V +RLPF + + G G V + DT
Sbjct 4 NAVRELLDRLLAPWVRSLGLVPVSIGDDSVTMRLPFSGEFRHSGGIICGQVFTAAADTTM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 64 VVAISVALGEFRPMT---TVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDG 120
Query 132 NIVAHAVQTYRIV 144
+ HA TY +V
Sbjct 121 KMAVHATSTYALV 133
>gi|261602797|gb|ACX92400.1| thioesterase superfamily protein [Sulfolobus solfataricus 98/2]
Length=150
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (29%), Positives = 55/127 (44%), Gaps = 3/127 (2%)
Query 17 VRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAA 76
V EL+ + +GI FE+ E ++ F LT G HGGV+ S +D AG+ A
Sbjct 15 VNELLKQEEIFNFIGIEFEKLEKGYSRLKFNFNEKLTRIGGILHGGVVFSAVDYAGSYAV 74
Query 77 WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAH 136
D+ T + I + K AR K L +I+A D + N+ A
Sbjct 75 ---RTLDKVKDGVTAELKINFLKPMKEGPFTVEARVISEGKRLVVVDISAYDGNSNLCAK 131
Query 137 AVQTYRI 143
A+ T+ +
Sbjct 132 ALGTWVV 138
>gi|284175310|ref|ZP_06389279.1| hypothetical protein Ssol98_11780 [Sulfolobus solfataricus 98/2]
Length=142
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (29%), Positives = 55/127 (44%), Gaps = 3/127 (2%)
Query 17 VRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAA 76
V EL+ + +GI FE+ E ++ F LT G HGGV+ S +D AG+ A
Sbjct 7 VNELLKQEEIFNFIGIEFEKLEKGYSRLKFNFNEKLTRIGGILHGGVVFSAVDYAGSYAV 66
Query 77 WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAH 136
D+ T + I + K AR K L +I+A D + N+ A
Sbjct 67 ---RTLDKVKDGVTAELKINFLKPMKEGPFTVEARVISEGKRLVVVDISAYDGNSNLCAK 123
Query 137 AVQTYRI 143
A+ T+ +
Sbjct 124 ALGTWVV 130
>gi|338780128|gb|EGP44546.1| thioesterase superfamily protein 6 [Achromobacter xylosoxidans
AXX-A]
Length=122
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/115 (35%), Positives = 57/115 (50%), Gaps = 3/115 (2%)
Query 30 LGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWSNHDFDRGTRAA 89
LG+V E+ P LP+R DLTN HGG + SV+D +AAA + + G A
Sbjct 4 LGLVPEQIGPAYARTSLPWREDLTNSRGDVHGGTLMSVLDFTLSAAARGSAEATEGM--A 61
Query 90 TVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQTYRIV 144
T+ M+ + DL+ AR RR + F E DG +VA A T++I+
Sbjct 62 TIDMNTTFLSPGT-GDLVIEARCLRRGGSIAFCEGDIRRADGELVARATATFKII 115
>gi|319764964|ref|YP_004128901.1| thioesterase superfamily protein [Alicycliphilus denitrificans
BC]
gi|330827158|ref|YP_004390461.1| phenylacetic acid degradation-like protein [Alicycliphilus denitrificans
K601]
gi|317119525|gb|ADV02014.1| thioesterase superfamily protein [Alicycliphilus denitrificans
BC]
gi|329312530|gb|AEB86945.1| phenylacetic acid degradation-related protein [Alicycliphilus
denitrificans K601]
Length=144
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/120 (33%), Positives = 55/120 (46%), Gaps = 3/120 (2%)
Query 25 PFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAAWSNHDFDR 84
PF+ +G+ EP RLP R +L N + HGG + S +D +AAA S +
Sbjct 25 PFMAYIGLEPVGLEPGLARTRLPLRPELANSRGHGHGGALMSALDFTLSAAARSGNPLGL 84
Query 85 GTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQTYRIV 144
G T+ M+ + A DLL AR R + F E TD GN V A +++V
Sbjct 85 GV--ITIEMNTHFLAPAT-TDLLIEARVLREGARIVFCEGNVTDAGGNTVCTARAVFKLV 141
>gi|189348986|ref|YP_001944614.1| phenylacetic acid degradation-related protein [Burkholderia multivorans
ATCC 17616]
gi|189333008|dbj|BAG42078.1| phenylacetic acid degradation-related protein [Burkholderia multivorans
ATCC 17616]
Length=134
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/132 (32%), Positives = 63/132 (48%), Gaps = 6/132 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ L +V D V +RLPF + + G G V + DTA
Sbjct 4 NAVRELLDRLLAPWVRSLDLVPVSIGDDSVTLRLPFSGEFRHSGGVICGQVFTAAADTAM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 64 VVAISAALGEFRPMT---TVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDG 120
Query 132 NIVAHAVQTYRI 143
+ HA TY +
Sbjct 121 KMAVHATSTYAL 132
>gi|161526300|ref|YP_001581312.1| thioesterase superfamily protein [Burkholderia multivorans ATCC
17616]
gi|221201850|ref|ZP_03574887.1| thioesterase superfamily protein [Burkholderia multivorans CGD2M]
gi|221207644|ref|ZP_03580652.1| thioesterase superfamily protein [Burkholderia multivorans CGD2]
gi|221214660|ref|ZP_03587630.1| thioesterase superfamily protein [Burkholderia multivorans CGD1]
gi|160343729|gb|ABX16815.1| thioesterase superfamily protein [Burkholderia multivorans ATCC
17616]
gi|221165550|gb|EED98026.1| thioesterase superfamily protein [Burkholderia multivorans CGD1]
gi|221172490|gb|EEE04929.1| thioesterase superfamily protein [Burkholderia multivorans CGD2]
gi|221178270|gb|EEE10680.1| thioesterase superfamily protein [Burkholderia multivorans CGD2M]
Length=153
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/132 (32%), Positives = 63/132 (48%), Gaps = 6/132 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
AVREL+ R P++ L +V D V +RLPF + + G G V + DTA
Sbjct 23 NAVRELLDRLLAPWVRSLDLVPVSIGDDSVTLRLPFSGEFRHSGGVICGQVFTAAADTAM 82
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TV+++ + ++ D+L AR R + L F E+ D DG
Sbjct 83 VVAISAALGEFRPMT---TVSLNTNFMRPVRKGDVLVTARVLRMGRNLVFGEVELFDEDG 139
Query 132 NIVAHAVQTYRI 143
+ HA TY +
Sbjct 140 KMAVHATSTYAL 151
>gi|83721650|ref|YP_440680.1| hypothetical protein BTH_I0121 [Burkholderia thailandensis E264]
gi|167579351|ref|ZP_02372225.1| uncharacterized domain 1, putative [Burkholderia thailandensis
TXDOH]
gi|167617451|ref|ZP_02386082.1| uncharacterized domain 1, putative [Burkholderia thailandensis
Bt4]
gi|257140675|ref|ZP_05588937.1| hypothetical protein BthaA_15905 [Burkholderia thailandensis
E264]
gi|83655475|gb|ABC39538.1| uncharacterized domain 1, putative [Burkholderia thailandensis
E264]
Length=134
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (31%), Positives = 63/133 (48%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
VR+L+ R P++ L + + V +RLPF +L + G G V + DTA
Sbjct 4 NTVRDLLDRLLAPWVRSLSLTPVSVSEESVTLRLPFSGELRHSGGVICGQVFMAAADTAM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TVA++ + ++ D+L AR R + L F EI D DG
Sbjct 64 VVAISAALGEFRPMT---TVALNTHFMRPVRKGDVLVTARVLRMGRNLVFGEIELFDEDG 120
Query 132 NIVAHAVQTYRIV 144
+ HA TY +V
Sbjct 121 KMAVHATSTYALV 133
>gi|15898097|ref|NP_342702.1| hypothetical protein SSO1253 [Sulfolobus solfataricus P2]
gi|23396967|sp|Q97YR6.1|Y1253_SULSO RecName: Full=Putative esterase SSO1253
gi|13814446|gb|AAK41492.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
Length=150
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/127 (28%), Positives = 54/127 (43%), Gaps = 3/127 (2%)
Query 17 VRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAA 76
V EL+ + +GI FE+ E ++ F LT G HGGV+ S +D AG+ A
Sbjct 15 VNELLKQEEIFNFIGIEFEKLEKGYSRLKFNFNEKLTRIGGILHGGVVFSAVDYAGSYAV 74
Query 77 WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAH 136
D+ T + I + K R K L +I+A D + N+ A
Sbjct 75 ---RTLDKVKDGVTAELKINFLKPMKEGPFTVEPRVISEGKRLVVVDISAYDGNSNLCAK 131
Query 137 AVQTYRI 143
A+ T+ +
Sbjct 132 ALGTWVV 138
>gi|333372073|ref|ZP_08464009.1| hypothetical protein HMPREF9374_1754 [Desmospora sp. 8437]
gi|332974981|gb|EGK11891.1| hypothetical protein HMPREF9374_1754 [Desmospora sp. 8437]
Length=179
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/144 (30%), Positives = 65/144 (46%), Gaps = 7/144 (4%)
Query 6 TAQEQHKRR---QAVRELMPR-TPFIGG-LGIVFERYEPDDVVIRLPFRTDLTNDGTYFH 60
T +EQ R QAVR+ R + ++ G LG+ E E R+P + N G H
Sbjct 35 TQEEQEILRLAVQAVRQKRERGSAYLSGFLGLAGEFTEEGTYRFRIPITPYMKNRGGIVH 94
Query 61 GGVIASVMDTAGAAAAWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELT 120
GG+ A+++D+ + N G A TV M + Y A +L+ AR R + L
Sbjct 95 GGITATLVDS--TMGSLINKSLPEGKAAVTVEMKVNYLEAGIGEELISEARLIRLGQTLA 152
Query 121 FTEITATDPDGNIVAHAVQTYRIV 144
F + + G + HA T+ I+
Sbjct 153 FADCKVENERGKRIVHATATFAII 176
>gi|167834971|ref|ZP_02461854.1| uncharacterized domain 1, putative [Burkholderia thailandensis
MSMB43]
Length=134
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/133 (31%), Positives = 63/133 (48%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
VR+L+ R P++ L + + V +RLPF +L + G G V + DTA
Sbjct 4 NTVRDLLDRLLAPWVRSLSLTPVSVSDESVTLRLPFSGELRHSGGVICGQVFMAAADTAM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TVA++ + ++ D+L AR R + L F EI D DG
Sbjct 64 VVAISAALGEFRPMT---TVALNTHFMRPVRKGDVLVTARVLRMGRNLVFGEIELFDEDG 120
Query 132 NIVAHAVQTYRIV 144
+ HA TY +V
Sbjct 121 KMAVHATSTYALV 133
>gi|167561021|ref|ZP_02353937.1| uncharacterized domain 1, putative [Burkholderia oklahomensis
EO147]
gi|167568283|ref|ZP_02361157.1| uncharacterized domain 1, putative [Burkholderia oklahomensis
C6786]
Length=134
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/133 (31%), Positives = 63/133 (48%), Gaps = 6/133 (4%)
Query 15 QAVRELMPR--TPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAG 72
VR+L+ R P++ L + + V +RLPF +L + G G V + DTA
Sbjct 4 NTVRDLLDRLLAPWVRSLSLTPVSVSEEGVTLRLPFSGELRHSGGVICGQVFMAAADTAM 63
Query 73 AAA-AWSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDG 131
A + + +F T TVA++ + ++ D+L AR R + L F EI D DG
Sbjct 64 VVAISAALGEFRPMT---TVALNTHFMRPVRKGDVLVTARVLRMGRNLVFGEIELFDEDG 120
Query 132 NIVAHAVQTYRIV 144
+ HA TY +V
Sbjct 121 KMAVHATSTYALV 133
>gi|114798994|ref|YP_760177.1| thioesterase family protein [Hyphomonas neptunium ATCC 15444]
gi|114739168|gb|ABI77293.1| thioesterase family protein [Hyphomonas neptunium ATCC 15444]
Length=151
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/105 (35%), Positives = 48/105 (46%), Gaps = 2/105 (1%)
Query 17 VRELMPRTPFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMDTAGAAAA 76
VRE R + LG V +P VIRLPFR LT YFH G +++ D+AG AA
Sbjct 16 VRESFARQGLMAHLGAVMTELDPGRAVIRLPFRDALTQQHGYFHAGGTSAIADSAGGYAA 75
Query 77 WSNHDFDRGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTF 121
++ F G+ TV I A+ L + R + LT
Sbjct 76 FTR--FPEGSSVLTVEYKINLLAPAEGAALEAVGQVIRHGRTLTI 118
>gi|33596270|ref|NP_883913.1| hypothetical protein BPP1634 [Bordetella parapertussis 12822]
gi|33566039|emb|CAE36935.1| conserved hypothetical protein [Bordetella parapertussis]
Length=169
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (34%), Positives = 56/121 (47%), Gaps = 6/121 (4%)
Query 25 PFIGGLGIVFERYEPDDVVIRLPFRTDLTNDGTYFHGGVIASVMD-TAGAAAAWSNHDFD 83
PF+ LG+V E RLP R DL N HGG + SV+D T GAA +
Sbjct 47 PFMQLLGVVPEHSGNGTARTRLPARADLVNSRGDIHGGTLMSVLDFTLGAAIRGDTPEVG 106
Query 84 RGTRAATVAMSIQYTGAAKRCDLLCHARTARRRKELTFTEITATDPDGNIVAHAVQTYRI 143
AT+ M+ + + R DL+ R RR + F E D G +VA A T++I
Sbjct 107 ----VATIDMNTSFM-SPGRGDLVIETRCLRRGASIAFCEGEIRDSAGELVAKATATFKI 161
Query 144 V 144
+
Sbjct 162 I 162
Lambda K H
0.323 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128702269584
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40