BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1539
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
gi|148822762|ref|YP_001287517.1| lipoprotein signal peptidase [M... 391 3e-107
gi|15608677|ref|NP_216055.1| lipoprotein signal peptidase [Mycob... 389 1e-106
gi|339294514|gb|AEJ46625.1| lipoprotein signal peptidase [Mycoba... 322 2e-86
gi|118617188|ref|YP_905520.1| lipoprotein signal peptidase LspA ... 311 3e-83
gi|183982374|ref|YP_001850665.1| lipoprotein signal peptidase Ls... 310 1e-82
gi|342860879|ref|ZP_08717529.1| lipoprotein signal peptidase [My... 304 4e-81
gi|296164415|ref|ZP_06846989.1| signal peptidase II [Mycobacteri... 300 5e-80
gi|120403757|ref|YP_953586.1| lipoprotein signal peptidase [Myco... 295 2e-78
gi|240167931|ref|ZP_04746590.1| lipoprotein signal peptidase [My... 294 4e-78
gi|15827610|ref|NP_301873.1| lipoprotein signal peptidase [Mycob... 292 2e-77
gi|145224224|ref|YP_001134902.1| lipoprotein signal peptidase [M... 284 6e-75
gi|315444558|ref|YP_004077437.1| lipoprotein signal peptidase [M... 283 9e-75
gi|254821466|ref|ZP_05226467.1| lipoprotein signal peptidase [My... 282 2e-74
gi|254775680|ref|ZP_05217196.1| lipoprotein signal peptidase [My... 280 9e-74
gi|118467010|ref|YP_882413.1| lipoprotein signal peptidase [Myco... 279 1e-73
gi|41407348|ref|NP_960184.1| lipoprotein signal peptidase [Mycob... 279 1e-73
gi|118473336|ref|YP_887489.1| lipoprotein signal peptidase [Myco... 273 1e-71
gi|126435692|ref|YP_001071383.1| lipoprotein signal peptidase [M... 259 2e-67
gi|169629785|ref|YP_001703434.1| lipoprotein signal peptidase [M... 258 4e-67
gi|108800059|ref|YP_640256.1| lipoprotein signal peptidase [Myco... 239 1e-61
gi|333990825|ref|YP_004523439.1| lipoprotein signal peptidase Ls... 232 2e-59
gi|54023756|ref|YP_117998.1| lipoprotein signal peptidase [Nocar... 201 6e-50
gi|229490352|ref|ZP_04384193.1| signal peptidase II [Rhodococcus... 197 9e-49
gi|226307022|ref|YP_002766982.1| signal peptidase II [Rhodococcu... 196 2e-48
gi|343924229|ref|ZP_08763792.1| lipoprotein signal peptidase [Go... 191 6e-47
gi|262202889|ref|YP_003274097.1| lipoprotein signal peptidase [G... 190 9e-47
gi|333919041|ref|YP_004492622.1| lipoprotein signal peptidase [A... 179 3e-43
gi|134102272|ref|YP_001107933.1| lipoprotein signal peptidase [S... 174 6e-42
gi|312140127|ref|YP_004007463.1| signal peptidase ii [Rhodococcu... 169 3e-40
gi|302528437|ref|ZP_07280779.1| signal peptidase (SPase) II [Str... 165 3e-39
gi|111018086|ref|YP_701058.1| lipoprotein signal peptidase [Rhod... 161 4e-38
gi|258653361|ref|YP_003202517.1| lipoprotein signal peptidase [N... 159 3e-37
gi|284030830|ref|YP_003380761.1| lipoprotein signal peptidase [K... 149 3e-34
gi|291301468|ref|YP_003512746.1| lipoprotein signal peptidase [S... 148 5e-34
gi|226360215|ref|YP_002777993.1| lipoprotein signal peptidase [R... 147 7e-34
gi|297559887|ref|YP_003678861.1| lipoprotein signal peptidase [N... 146 1e-33
gi|319949598|ref|ZP_08023641.1| lipoprotein signal peptidase [Di... 146 1e-33
gi|312196233|ref|YP_004016294.1| lipoprotein signal peptidase [F... 140 8e-32
gi|326333483|ref|ZP_08199725.1| signal peptidase II [Nocardioida... 140 1e-31
gi|269127124|ref|YP_003300494.1| peptidase A8 signal peptidase I... 138 4e-31
gi|256379747|ref|YP_003103407.1| lipoprotein signal peptidase [A... 137 9e-31
gi|317508657|ref|ZP_07966313.1| signal peptidase II [Segniliparu... 136 2e-30
gi|152967133|ref|YP_001362917.1| lipoprotein signal peptidase [K... 135 3e-30
gi|300784874|ref|YP_003765165.1| signal peptidase II [Amycolatop... 135 3e-30
gi|158316844|ref|YP_001509352.1| lipoprotein signal peptidase [F... 135 3e-30
gi|86740131|ref|YP_480531.1| lipoprotein signal peptidase [Frank... 134 8e-30
gi|288923210|ref|ZP_06417352.1| lipoprotein signal peptidase [Fr... 132 4e-29
gi|320531631|ref|ZP_08032573.1| signal peptidase II [Actinomyces... 130 8e-29
gi|256825467|ref|YP_003149427.1| lipoprotein signal peptidase [K... 130 1e-28
gi|315504974|ref|YP_004083861.1| lipoprotein signal peptidase [M... 129 2e-28
>gi|148822762|ref|YP_001287517.1| lipoprotein signal peptidase [Mycobacterium tuberculosis F11]
gi|253799406|ref|YP_003032407.1| lipoprotein signal peptidase lspA [Mycobacterium tuberculosis
KZN 1435]
gi|254231767|ref|ZP_04925094.1| lipoprotein signal peptidase lspA [Mycobacterium tuberculosis
C]
25 more sequence titles
Length=224
Score = 391 bits (1004), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 202/202 (100%), Positives = 202/202 (100%), Gaps = 0/202 (0%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP
Sbjct 23 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 82
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL
Sbjct 83 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 142
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF
Sbjct 143 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 202
Query 181 DFDTVGRRHADGDTVGRRKADG 202
DFDTVGRRHADGDTVGRRKADG
Sbjct 203 DFDTVGRRHADGDTVGRRKADG 224
>gi|15608677|ref|NP_216055.1| lipoprotein signal peptidase [Mycobacterium tuberculosis H37Rv]
gi|15841006|ref|NP_336043.1| lipoprotein signal peptidase [Mycobacterium tuberculosis CDC1551]
gi|31792725|ref|NP_855218.1| lipoprotein signal peptidase [Mycobacterium bovis AF2122/97]
45 more sequence titles
Length=202
Score = 389 bits (999), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 201/202 (99%), Positives = 202/202 (100%), Gaps = 0/202 (0%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
+PDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP
Sbjct 1 MPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL
Sbjct 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF
Sbjct 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
Query 181 DFDTVGRRHADGDTVGRRKADG 202
DFDTVGRRHADGDTVGRRKADG
Sbjct 181 DFDTVGRRHADGDTVGRRKADG 202
>gi|339294514|gb|AEJ46625.1| lipoprotein signal peptidase [Mycobacterium tuberculosis CCDC5079]
gi|339298150|gb|AEJ50260.1| lipoprotein signal peptidase [Mycobacterium tuberculosis CCDC5180]
Length=168
Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 35 MLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLT 94
MLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLT
Sbjct 1 MLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLT 60
Query 95 LIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGW 154
LIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGW
Sbjct 61 LIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGW 120
Query 155 WPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGDTVGRRKADG 202
WPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGDTVGRRKADG
Sbjct 121 WPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGDTVGRRKADG 168
>gi|118617188|ref|YP_905520.1| lipoprotein signal peptidase LspA [Mycobacterium ulcerans Agy99]
gi|118569298|gb|ABL04049.1| lipoprotein signal peptidase LspA [Mycobacterium ulcerans Agy99]
Length=309
Score = 311 bits (797), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/194 (86%), Positives = 171/194 (89%), Gaps = 3/194 (1%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLL---SVAVVVLTLDIVTKVVAVQL 57
V DEPTGSADPLT+ E G EP AP R L SVA VVL LD+VTKV+AV+L
Sbjct 114 VSDEPTGSADPLTTAGETGVTEEPKVSAPEPPPRRLRLLLSVAAVVLALDVVTKVLAVKL 173
Query 58 LPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWA 117
LPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWA
Sbjct 174 LPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWA 233
Query 118 LGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSI 177
+GLGMILGGAMGNLVDRFFRAPGPLRGHVVDF SVGWWPVFNVADPSVVGGAILLVILSI
Sbjct 234 VGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFFSVGWWPVFNVADPSVVGGAILLVILSI 293
Query 178 FGFDFDTVGRRHAD 191
FGFDFDTVGRR AD
Sbjct 294 FGFDFDTVGRRKAD 307
>gi|183982374|ref|YP_001850665.1| lipoprotein signal peptidase LspA [Mycobacterium marinum M]
gi|183175700|gb|ACC40810.1| lipoprotein signal peptidase LspA [Mycobacterium marinum M]
Length=196
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/192 (86%), Positives = 170/192 (89%), Gaps = 3/192 (1%)
Query 3 DEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLL---SVAVVVLTLDIVTKVVAVQLLP 59
DEPTGSADPLT+ E G EP AP R L SVA VVL LD+VTKV+AV+LLP
Sbjct 3 DEPTGSADPLTTAGETGVTEEPKVSAPEPPPRRLRLLLSVAAVVLALDVVTKVLAVKLLP 62
Query 60 PGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALG 119
PGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWA+G
Sbjct 63 PGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWAVG 122
Query 120 LGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFG 179
LGMILGGAMGNLVDRFFRAPGPLRGHVVDF SVGWWPVFNVADPSVVGGAILLVILSIFG
Sbjct 123 LGMILGGAMGNLVDRFFRAPGPLRGHVVDFFSVGWWPVFNVADPSVVGGAILLVILSIFG 182
Query 180 FDFDTVGRRHAD 191
FDFDTVGRR AD
Sbjct 183 FDFDTVGRRKAD 194
>gi|342860879|ref|ZP_08717529.1| lipoprotein signal peptidase [Mycobacterium colombiense CECT
3035]
gi|342131903|gb|EGT85160.1| lipoprotein signal peptidase [Mycobacterium colombiense CECT
3035]
Length=205
Score = 304 bits (779), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 164/201 (82%), Positives = 177/201 (89%), Gaps = 14/201 (6%)
Query 12 LTSTEEAGGAG------EPNA---PAP-PRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPG 61
+TS EEAGGA EP + P P PRRLR+LLS+A ++L LD+VTKV+AV+LLPPG
Sbjct 1 MTSAEEAGGAAPVERDAEPESVASPGPAPRRLRLLLSIAAIILALDVVTKVLAVKLLPPG 60
Query 62 QPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLG 121
QPV IIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVV GIFWMGRRLVSPWWA+GLG
Sbjct 61 QPVPIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVAGIFWMGRRLVSPWWAVGLG 120
Query 122 MILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFD 181
MILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLV+LSIFGFD
Sbjct 121 MILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVVLSIFGFD 180
Query 182 FDTVGRRHADGDTVGRRKADG 202
FD+VGRR A GD RRK +G
Sbjct 181 FDSVGRRTA-GD---RRKDEG 197
>gi|296164415|ref|ZP_06846989.1| signal peptidase II [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900197|gb|EFG79629.1| signal peptidase II [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=209
Score = 300 bits (769), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 164/191 (86%), Positives = 174/191 (92%), Gaps = 0/191 (0%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
VP+EPT S +P TST+ A G PPRRLR+LLSVA +VL LDIVTKV+AV+LLPP
Sbjct 16 VPEEPTRSTEPATSTDHAEGGAATGPRRPPRRLRLLLSVAAIVLALDIVTKVLAVKLLPP 75
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
GQPV IIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWA+GL
Sbjct 76 GQPVPIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWAVGL 135
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLV+LSIFG+
Sbjct 136 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVVLSIFGY 195
Query 181 DFDTVGRRHAD 191
DFDTVGRR AD
Sbjct 196 DFDTVGRRKAD 206
>gi|120403757|ref|YP_953586.1| lipoprotein signal peptidase [Mycobacterium vanbaalenii PYR-1]
gi|119956575|gb|ABM13580.1| lipoprotein signal peptidase [Mycobacterium vanbaalenii PYR-1]
Length=234
Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/202 (81%), Positives = 181/202 (90%), Gaps = 3/202 (1%)
Query 3 DEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQ 62
DE + +P+T +A G EP P+PPRRLR+LL+VA VVL LDIVTKV+AV+LL PGQ
Sbjct 3 DESSSPVEPVTGEGKAAGD-EPAQPSPPRRLRLLLTVAGVVLVLDIVTKVLAVRLLTPGQ 61
Query 63 PVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGM 122
PVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTL+ATGVV+GI WMGRRLVSPWWALGLG+
Sbjct 62 PVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLVATGVVLGIIWMGRRLVSPWWALGLGL 121
Query 123 ILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDF 182
ILGGAMGNLVDRFFR+PGPLRGHVVDFLS+GWWPVFNVADPSVVGGAILLV+LS+FGFDF
Sbjct 122 ILGGAMGNLVDRFFRSPGPLRGHVVDFLSIGWWPVFNVADPSVVGGAILLVVLSLFGFDF 181
Query 183 DTVGRRHADG--DTVGRRKADG 202
D+VGRR DG D+VGRR+ DG
Sbjct 182 DSVGRRQPDGGEDSVGRRQPDG 203
>gi|240167931|ref|ZP_04746590.1| lipoprotein signal peptidase [Mycobacterium kansasii ATCC 12478]
Length=178
Score = 294 bits (753), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/168 (92%), Positives = 158/168 (95%), Gaps = 0/168 (0%)
Query 35 MLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLT 94
MLLSVA +VL LDIVTKV+AV+LLPPGQPV IIGDTVTWTLVRNSGAAFSMATGYTWVLT
Sbjct 1 MLLSVAAIVLALDIVTKVLAVKLLPPGQPVPIIGDTVTWTLVRNSGAAFSMATGYTWVLT 60
Query 95 LIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGW 154
LIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGW
Sbjct 61 LIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGW 120
Query 155 WPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGDTVGRRKADG 202
WPVFNVADPSVVGGAILLV+LSI GFDFD+VGRR D T RRKADG
Sbjct 121 WPVFNVADPSVVGGAILLVVLSILGFDFDSVGRRRPDRATPSRRKADG 168
>gi|15827610|ref|NP_301873.1| lipoprotein signal peptidase [Mycobacterium leprae TN]
gi|221230087|ref|YP_002503503.1| lipoprotein signal peptidase [Mycobacterium leprae Br4923]
gi|32171516|sp|Q9X7E7.1|LSPA_MYCLE RecName: Full=Lipoprotein signal peptidase; AltName: Full=Prolipoprotein
signal peptidase; AltName: Full=Signal peptidase
II; Short=SPase II
gi|254810451|sp|B8ZR76.1|LSPA_MYCLB RecName: Full=Lipoprotein signal peptidase; AltName: Full=Prolipoprotein
signal peptidase; AltName: Full=Signal peptidase
II; Short=SPase II
gi|4539133|emb|CAB39579.1| putative lipoprotein signal peptidase [Mycobacterium leprae]
gi|13093161|emb|CAC31580.1| lipoprotein signal peptidase [Mycobacterium leprae]
gi|219933194|emb|CAR71294.1| lipoprotein signal peptidase [Mycobacterium leprae Br4923]
Length=201
Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/201 (82%), Positives = 175/201 (88%), Gaps = 6/201 (2%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
VPD PTG A + S EEA A PPRRLR+LLS+A VVLTLDIVTKV+AV+ L P
Sbjct 5 VPDGPTGLAALVPSVEEA------QAMLPPRRLRLLLSIAAVVLTLDIVTKVLAVKFLLP 58
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
G+ VSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVV+GIFWMGRRLVS WWALGL
Sbjct 59 GKSVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVIGIFWMGRRLVSSWWALGL 118
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GMILGGAMGNLVDRFFRAP PLRGHVVDFLS+GWWPVFNVADPSVV GAILLV+LSIFGF
Sbjct 119 GMILGGAMGNLVDRFFRAPAPLRGHVVDFLSIGWWPVFNVADPSVVVGAILLVVLSIFGF 178
Query 181 DFDTVGRRHADGDTVGRRKAD 201
DFDTVGRR A+ D G+RKA+
Sbjct 179 DFDTVGRRKAEFDIAGQRKAE 199
>gi|145224224|ref|YP_001134902.1| lipoprotein signal peptidase [Mycobacterium gilvum PYR-GCK]
gi|145216710|gb|ABP46114.1| lipoprotein signal peptidase [Mycobacterium gilvum PYR-GCK]
Length=272
Score = 284 bits (726), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 158/203 (78%), Positives = 173/203 (86%), Gaps = 3/203 (1%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
V DE + +P T+ E GE P RRLR+LL VA VVL DIVTKV+AV+LL P
Sbjct 5 VTDESSSPVEP-TTGEGTAEPGEAVQPPVRRRLRLLLGVAAVVLVADIVTKVLAVKLLTP 63
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTL+ATGVV+GI WMGRRLVSPWWALGL
Sbjct 64 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLVATGVVIGIVWMGRRLVSPWWALGL 123
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GMILGGA+GNLVDRFFR+PGPLRGHVVDFLS+GWWPVFNVADP+VVGGAILLV+LS+FGF
Sbjct 124 GMILGGALGNLVDRFFRSPGPLRGHVVDFLSIGWWPVFNVADPAVVGGAILLVVLSLFGF 183
Query 181 DFDTVGRRHAD--GDTVGRRKAD 201
DFDTVGRR D DTVGRR+ D
Sbjct 184 DFDTVGRRQPDDADDTVGRRQPD 206
>gi|315444558|ref|YP_004077437.1| lipoprotein signal peptidase [Mycobacterium sp. Spyr1]
gi|315262861|gb|ADT99602.1| lipoprotein signal peptidase [Mycobacterium sp. Spyr1]
Length=260
Score = 283 bits (724), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 158/203 (78%), Positives = 173/203 (86%), Gaps = 3/203 (1%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
V DE + +P T+ E GE P RRLR+LL VA VVL DIVTKV+AV+LL P
Sbjct 5 VTDESSSPVEP-TTGEGTAEPGEGVQPPVRRRLRLLLGVAAVVLVADIVTKVLAVKLLTP 63
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTL+ATGVV+GI WMGRRLVSPWWALGL
Sbjct 64 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLVATGVVIGIVWMGRRLVSPWWALGL 123
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GMILGGA+GNLVDRFFR+PGPLRGHVVDFLS+GWWPVFNVADP+VVGGAILLV+LS+FGF
Sbjct 124 GMILGGALGNLVDRFFRSPGPLRGHVVDFLSIGWWPVFNVADPAVVGGAILLVVLSLFGF 183
Query 181 DFDTVGRRHAD--GDTVGRRKAD 201
DFDTVGRR D DTVGRR+ D
Sbjct 184 DFDTVGRRQPDDADDTVGRRQPD 206
>gi|254821466|ref|ZP_05226467.1| lipoprotein signal peptidase [Mycobacterium intracellulare ATCC
13950]
Length=189
Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/183 (84%), Positives = 167/183 (92%), Gaps = 0/183 (0%)
Query 12 LTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTV 71
+TS ++ A + PPRRLR+LLSVA +VL LDIVTKV+AV+LLPPGQPV IIGDT+
Sbjct 1 MTSADKPEDAAATDPQRPPRRLRLLLSVAAIVLALDIVTKVLAVKLLPPGQPVPIIGDTI 60
Query 72 TWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNL 131
TWTLVRNSGAAFSMATGYTW+LTLIATGVVVGIFWMGRRLVSPWWA+GLG+ILGGAMGNL
Sbjct 61 TWTLVRNSGAAFSMATGYTWMLTLIATGVVVGIFWMGRRLVSPWWAVGLGLILGGAMGNL 120
Query 132 VDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHAD 191
VDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLV+LSIFGFDFD+VGRR D
Sbjct 121 VDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVVLSIFGFDFDSVGRRRKD 180
Query 192 GDT 194
DT
Sbjct 181 DDT 183
>gi|254775680|ref|ZP_05217196.1| lipoprotein signal peptidase [Mycobacterium avium subsp. avium
ATCC 25291]
gi|336457944|gb|EGO36934.1| lipoprotein signal peptidase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=184
Score = 280 bits (716), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 153/189 (81%), Positives = 161/189 (86%), Gaps = 14/189 (7%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
VP++PTGS P LR+LLSVA VL LDIVTKV+AV+LLPP
Sbjct 3 VPEQPTGSTAPQDRPPRR--------------LRLLLSVAATVLALDIVTKVLAVKLLPP 48
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
GQPV IIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWA+GL
Sbjct 49 GQPVPIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWAVGL 108
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLV+LSIFG+
Sbjct 109 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVVLSIFGY 168
Query 181 DFDTVGRRH 189
DFDTVGRR
Sbjct 169 DFDTVGRRK 177
>gi|118467010|ref|YP_882413.1| lipoprotein signal peptidase [Mycobacterium avium 104]
gi|152032419|sp|A0QHM5.1|LSPA_MYCA1 RecName: Full=Lipoprotein signal peptidase; AltName: Full=Prolipoprotein
signal peptidase; AltName: Full=Signal peptidase
II; Short=SPase II
gi|118168297|gb|ABK69194.1| signal peptidase II [Mycobacterium avium 104]
Length=182
Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/189 (81%), Positives = 161/189 (86%), Gaps = 14/189 (7%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
+P+EPTGS P LR+LLSVA VL LDIVTKV+AV+LLPP
Sbjct 1 MPEEPTGSTAPQDRPPRR--------------LRLLLSVAATVLALDIVTKVLAVKLLPP 46
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
GQPV IIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWA+GL
Sbjct 47 GQPVPIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWAVGL 106
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLV+LSIFG+
Sbjct 107 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVVLSIFGY 166
Query 181 DFDTVGRRH 189
DFDTVGRR
Sbjct 167 DFDTVGRRK 175
>gi|41407348|ref|NP_960184.1| lipoprotein signal peptidase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395700|gb|AAS03567.1| LspA [Mycobacterium avium subsp. paratuberculosis K-10]
Length=184
Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/189 (81%), Positives = 161/189 (86%), Gaps = 14/189 (7%)
Query 1 VPDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
VP++PTGS P LR+LLSVA VL LDIVTKV+AV+LLPP
Sbjct 3 VPEQPTGSTAPHDRPPRR--------------LRLLLSVAATVLALDIVTKVLAVKLLPP 48
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
GQPV IIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWA+GL
Sbjct 49 GQPVPIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWAVGL 108
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLV+LSIFG+
Sbjct 109 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVVLSIFGY 168
Query 181 DFDTVGRRH 189
DFDTVGRR
Sbjct 169 DFDTVGRRK 177
>gi|118473336|ref|YP_887489.1| lipoprotein signal peptidase [Mycobacterium smegmatis str. MC2
155]
gi|118174623|gb|ABK75519.1| lipoprotein signal peptidase [Mycobacterium smegmatis str. MC2
155]
Length=235
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/192 (80%), Positives = 167/192 (87%), Gaps = 6/192 (3%)
Query 3 DEPTGSADPLTSTEEAGGAGEPNAPA-PPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPG 61
DE +G A+P+T G+ +PA P RRLR+LL+VA VVL LD+VTKV+AV+LL PG
Sbjct 3 DETSGPAEPVTD-----APGDAESPAQPKRRLRLLLTVAAVVLFLDVVTKVLAVRLLTPG 57
Query 62 QPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLG 121
QPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTL+ATGVV+GI WMGRRLVSPWWALGLG
Sbjct 58 QPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLVATGVVIGIIWMGRRLVSPWWALGLG 117
Query 122 MILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFD 181
+ILGGA GNLVDRFFR+PGPLRGHVVDF SVGWWPVFNVADPSVVGGAILLV LS+FGFD
Sbjct 118 LILGGATGNLVDRFFRSPGPLRGHVVDFFSVGWWPVFNVADPSVVGGAILLVALSLFGFD 177
Query 182 FDTVGRRHADGD 193
FDTVGRR D
Sbjct 178 FDTVGRRRPGED 189
>gi|126435692|ref|YP_001071383.1| lipoprotein signal peptidase [Mycobacterium sp. JLS]
gi|126235492|gb|ABN98892.1| lipoprotein signal peptidase [Mycobacterium sp. JLS]
Length=230
Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/200 (76%), Positives = 171/200 (86%), Gaps = 2/200 (1%)
Query 2 PDEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPG 61
P + +G +P T E AP P RRL +LLSVA V+L LD+VTKV+AV+LL PG
Sbjct 7 PGKASGKVEPTTGAAEPPDVPVDPAPRPRRRLGLLLSVAAVILVLDVVTKVLAVRLLTPG 66
Query 62 QPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLG 121
QPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTL+ATGVV+GI WMGRRLVSPWWALGLG
Sbjct 67 QPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLVATGVVIGIIWMGRRLVSPWWALGLG 126
Query 122 MILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFD 181
+ILGGAMGNL+DRFFR+PGPLRGHVVDFLS+GWWPVFNVADPSVVGGAILLV+LS+FGFD
Sbjct 127 LILGGAMGNLIDRFFRSPGPLRGHVVDFLSIGWWPVFNVADPSVVGGAILLVVLSLFGFD 186
Query 182 FDTVGRRHADGDT--VGRRK 199
FDTVGRR ++ VGRR+
Sbjct 187 FDTVGRRQPGDESGPVGRRQ 206
>gi|169629785|ref|YP_001703434.1| lipoprotein signal peptidase [Mycobacterium abscessus ATCC 19977]
gi|169241752|emb|CAM62780.1| Lipoprotein signal peptidase [Mycobacterium abscessus]
Length=195
Score = 258 bits (659), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 132/172 (77%), Positives = 148/172 (87%), Gaps = 0/172 (0%)
Query 25 NAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFS 84
A P RR+++LL VA VVL LD+VTKV+AV+LL PG+PV IIGDTVTWTLVRNSGAAFS
Sbjct 7 TARKPKRRIKLLLIVASVVLVLDVVTKVLAVRLLQPGKPVPIIGDTVTWTLVRNSGAAFS 66
Query 85 MATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRG 144
ATGYTWVLTLIA VVVGI ++GRRLVS WWA+GLGMILGGA+GNLVDRFFR PGPLRG
Sbjct 67 FATGYTWVLTLIAISVVVGILFIGRRLVSTWWAIGLGMILGGALGNLVDRFFRGPGPLRG 126
Query 145 HVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGDTVG 196
HVVDFLSVGWWPVFNVADPSVVGGAILLV LS+FG+D+D GR + + G
Sbjct 127 HVVDFLSVGWWPVFNVADPSVVGGAILLVALSLFGYDYDREGRSTSKPASSG 178
>gi|108800059|ref|YP_640256.1| lipoprotein signal peptidase [Mycobacterium sp. MCS]
gi|119869185|ref|YP_939137.1| lipoprotein signal peptidase [Mycobacterium sp. KMS]
gi|108770478|gb|ABG09200.1| lipoprotein signal peptidase [Mycobacterium sp. MCS]
gi|119695274|gb|ABL92347.1| lipoprotein signal peptidase [Mycobacterium sp. KMS]
Length=230
Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/148 (88%), Positives = 140/148 (95%), Gaps = 2/148 (1%)
Query 54 AVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVS 113
AV+LL PGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTL+ATGVV+GI WMGRRLVS
Sbjct 59 AVRLLTPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLVATGVVIGIIWMGRRLVS 118
Query 114 PWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLV 173
PWWALGLG+ILGGAMGNL+DRFFR+PGPLRGHVVDFLS+GWWPVFNVADPSVVGGAILLV
Sbjct 119 PWWALGLGLILGGAMGNLIDRFFRSPGPLRGHVVDFLSIGWWPVFNVADPSVVGGAILLV 178
Query 174 ILSIFGFDFDTVGRRHA--DGDTVGRRK 199
+LS+FGFDFDTVGRR + D VGRR+
Sbjct 179 VLSLFGFDFDTVGRRQPGDESDPVGRRQ 206
>gi|333990825|ref|YP_004523439.1| lipoprotein signal peptidase LspA [Mycobacterium sp. JDM601]
gi|333486793|gb|AEF36185.1| lipoprotein signal peptidase LspA [Mycobacterium sp. JDM601]
Length=212
Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/153 (85%), Positives = 142/153 (93%), Gaps = 0/153 (0%)
Query 33 LRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWV 92
L +LLSVA VVL +D+VTKV+AV+LL PGQPV IIGDTVTWTLVRNSGAAFSMAT YTWV
Sbjct 26 LGLLLSVAAVVLLVDVVTKVLAVRLLTPGQPVPIIGDTVTWTLVRNSGAAFSMATSYTWV 85
Query 93 LTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSV 152
LTLIA+ VV+GI WM RRLVSPWWA+GLGMILGGA+GNLVDRFFRAPG L+GHVVDFLS+
Sbjct 86 LTLIASSVVLGIIWMSRRLVSPWWAVGLGMILGGALGNLVDRFFRAPGHLQGHVVDFLSI 145
Query 153 GWWPVFNVADPSVVGGAILLVILSIFGFDFDTV 185
GWWPVFNVADP+VVGGAILLV LS+FGFDFDTV
Sbjct 146 GWWPVFNVADPAVVGGAILLVTLSVFGFDFDTV 178
>gi|54023756|ref|YP_117998.1| lipoprotein signal peptidase [Nocardia farcinica IFM 10152]
gi|54015264|dbj|BAD56634.1| putative signal peptidase [Nocardia farcinica IFM 10152]
Length=240
Score = 201 bits (510), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/175 (59%), Positives = 129/175 (74%), Gaps = 2/175 (1%)
Query 29 PPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATG 88
PP RLR LL +A + LD++TK +AV L+ PG+PV +IGD LVRN GAAFSMATG
Sbjct 29 PPLRLRTLLIIAFCLYALDLLTKCLAVALIDPGEPVPVIGDFARLALVRNPGAAFSMATG 88
Query 89 YTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVD 148
TW+LTLIAT VV+G+ +GR L S WWA+GLGM+LGGA+GNL DR FR+PGPL+GHVVD
Sbjct 89 MTWLLTLIATAVVIGVIRIGRTLRSLWWAIGLGMVLGGALGNLTDRLFRSPGPLQGHVVD 148
Query 149 FLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFD--TVGRRHADGDTVGRRKAD 201
F++VG +PVFNVAD ++V GA LLV+ ++FGF+ D VGR + D D
Sbjct 149 FVAVGDFPVFNVADSAIVCGATLLVVATVFGFEPDGTRVGRDDENDDAANEDGTD 203
>gi|229490352|ref|ZP_04384193.1| signal peptidase II [Rhodococcus erythropolis SK121]
gi|229322642|gb|EEN88422.1| signal peptidase II [Rhodococcus erythropolis SK121]
Length=228
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/199 (58%), Positives = 146/199 (74%), Gaps = 10/199 (5%)
Query 3 DEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQ 62
DEP +E+ A P PRRL ML+++A V+L DI+TKV AV + PGQ
Sbjct 24 DEPETVKPEAVKSEDGDLAVAP--VEKPRRLTMLIAIAAVILLSDILTKVWAVAAVKPGQ 81
Query 63 PVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGM 122
P+ IIGD VT+T+VRN GAAFSMAT TW+LTL+A GVV+G+ +GR L SPWWALGLG+
Sbjct 82 PIEIIGDVVTFTMVRNPGAAFSMATSMTWILTLVAIGVVIGVIKIGRTLRSPWWALGLGL 141
Query 123 ILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDF 182
+LGGA+GNLVDRFFR+PG +RGHVVDF+SVGWWPVFN+AD ++V GAILLV+L++FGF+
Sbjct 142 VLGGALGNLVDRFFRSPGIMRGHVVDFVSVGWWPVFNIADSAIVCGAILLVVLTLFGFE- 200
Query 183 DTVGRRHADGDTVGRRKAD 201
+G+ + KAD
Sbjct 201 -------PNGERLRDHKAD 212
>gi|226307022|ref|YP_002766982.1| signal peptidase II [Rhodococcus erythropolis PR4]
gi|226186139|dbj|BAH34243.1| signal peptidase II [Rhodococcus erythropolis PR4]
Length=200
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/174 (63%), Positives = 139/174 (80%), Gaps = 8/174 (4%)
Query 28 APPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMAT 87
A PRRL ML+++A V+L DI+TKV AV + PGQP+ IIGD VT+T+VRN GAAFSMAT
Sbjct 19 AKPRRLTMLIAIAAVILLSDILTKVWAVAAVKPGQPIEIIGDVVTFTMVRNPGAAFSMAT 78
Query 88 GYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVV 147
TW+LTL+A GVV+G+ +GR L SPWWALGLG++LGGA+GNLVDRFFR+PG +RGHVV
Sbjct 79 SMTWILTLVAIGVVIGVIKIGRTLRSPWWALGLGLVLGGALGNLVDRFFRSPGIMRGHVV 138
Query 148 DFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGDTVGRRKAD 201
DF+SVGWWPVFN+AD ++V GAILLV+L++FGF+ +G+ + KAD
Sbjct 139 DFVSVGWWPVFNIADSAIVCGAILLVVLTLFGFE--------PNGERLRDHKAD 184
>gi|343924229|ref|ZP_08763792.1| lipoprotein signal peptidase [Gordonia alkanivorans NBRC 16433]
gi|343766034|dbj|GAA10718.1| lipoprotein signal peptidase [Gordonia alkanivorans NBRC 16433]
Length=308
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/199 (57%), Positives = 137/199 (69%), Gaps = 23/199 (11%)
Query 1 VPDEP---TGSADPLTSTEEAGGAGEPNA---------PAPPRRLRML----LSVAVVVL 44
V D+P +G+ADP GA P+A P RR + L VA+VV+
Sbjct 82 VDDQPLTDSGNADP-------HGADSPDADRDRVPSDDATPARRFSKVTAAVLGVALVVI 134
Query 45 TLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGI 104
LD++TK++AV L P +PV IIGD VT LVRNSGAAFS+A+GYTWVLT+IA VVV I
Sbjct 135 GLDLLTKIIAVAALDPQRPVQIIGDVVTLRLVRNSGAAFSLASGYTWVLTIIALVVVVVI 194
Query 105 FWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPS 164
RL S WA+GL ++LGGA+GNL+DR FRAP PL+GHVVDF+SVGWWPVFNVAD +
Sbjct 195 VRYSSRLKSWGWAIGLALVLGGAIGNLIDRIFRAPAPLQGHVVDFVSVGWWPVFNVADSA 254
Query 165 VVGGAILLVILSIFGFDFD 183
VV GAILLV LS GFD+D
Sbjct 255 VVCGAILLVALSALGFDYD 273
>gi|262202889|ref|YP_003274097.1| lipoprotein signal peptidase [Gordonia bronchialis DSM 43247]
gi|262086236|gb|ACY22204.1| lipoprotein signal peptidase [Gordonia bronchialis DSM 43247]
Length=219
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 107/183 (59%), Positives = 129/183 (71%), Gaps = 2/183 (1%)
Query 3 DEPTGSADPLT--STEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPP 60
DE A P T E P R + LL +AV+V+ LD++TK++AV LL P
Sbjct 3 DEGVDDAAPDTPDRVESDRDGTTPVRRRSTRVMLTLLGIAVIVVGLDLLTKMLAVALLDP 62
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
G V++IGD V LVRNSGAAFSMA+GYTW+L+ IA VVV I RL S WW LGL
Sbjct 63 GVGVNVIGDAVQLYLVRNSGAAFSMASGYTWILSCIALVVVVVIVRYSGRLRSAWWVLGL 122
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGF 180
GM+LGGA+GNLVDR FRAP PL+GHVVDF+ VGWWPVFNVAD +VV GAILLV+LS+ G+
Sbjct 123 GMVLGGAIGNLVDRIFRAPQPLQGHVVDFVKVGWWPVFNVADSAVVCGAILLVVLSLLGY 182
Query 181 DFD 183
D+D
Sbjct 183 DYD 185
>gi|333919041|ref|YP_004492622.1| lipoprotein signal peptidase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481262|gb|AEF39822.1| Lipoprotein signal peptidase [Amycolicicoccus subflavus DQS3-9A1]
Length=187
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/173 (61%), Positives = 125/173 (73%), Gaps = 7/173 (4%)
Query 28 APPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMAT 87
A P+RLR+L SVAVVVL LD+VTK VAV LL +PV ++G V L RN GAAFSMAT
Sbjct 11 AHPKRLRLLFSVAVVVLALDLVTKSVAVALLEDREPVRLLGGAVYLVLYRNPGAAFSMAT 70
Query 88 GYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVV 147
G TW+LTL+A VVV I + R L S WALGLG +LGGA+GNL DR FRAPGP++GHVV
Sbjct 71 GMTWLLTLVAITVVVVIIRLSRNLRSLPWALGLGFVLGGALGNLADRMFRAPGPMQGHVV 130
Query 148 DFLSV-----GWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGDTV 195
DF+S+ WPVFNVADP++VGGAI LV L+ G D D G+RH+ + V
Sbjct 131 DFVSLFAPDGSVWPVFNVADPAIVGGAIFLVALTFLGLDPD--GQRHSKKEQV 181
>gi|134102272|ref|YP_001107933.1| lipoprotein signal peptidase [Saccharopolyspora erythraea NRRL
2338]
gi|291003765|ref|ZP_06561738.1| lipoprotein signal peptidase [Saccharopolyspora erythraea NRRL
2338]
gi|133914895|emb|CAM05008.1| lipoprotein signal peptidase [Saccharopolyspora erythraea NRRL
2338]
Length=244
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/204 (49%), Positives = 126/204 (62%), Gaps = 12/204 (5%)
Query 4 EPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQP 63
E D TS E P P P R L ++ ++A V L LDI TKV V L G P
Sbjct 47 EAGAERDAGTSAEAGATEETPAGPNPRRLLALVFAIAAVALGLDIATKVAVVANLEGGPP 106
Query 64 VSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMI 123
V I+G V + RN GAAFS+ATG TW+L L+A VV I W+ R+L S WA+GLG++
Sbjct 107 VPILGGVVYLDVFRNPGAAFSLATGMTWLLALLAIVVVGVIVWLARKLRSTGWAIGLGLV 166
Query 124 LGGAMGNLVDRFFRAPGPLRGHVVDFLSV-----GWWPVFNVADPSVVGGAILLVILSIF 178
LGGA GNLVDRFFRAPGP++GHVVDF+SV ++PVFN+AD ++V G L+V+LS+
Sbjct 167 LGGACGNLVDRFFRAPGPMQGHVVDFISVFAPGGQYYPVFNLADSAIVCGGALVVLLSLL 226
Query 179 GFDFDTVGRRHADGDTVGRRKADG 202
G D+D R G+RK G
Sbjct 227 GRDYDGTVHR-------GKRKQAG 243
>gi|312140127|ref|YP_004007463.1| signal peptidase ii [Rhodococcus equi 103S]
gi|325674392|ref|ZP_08154080.1| signal peptidase II [Rhodococcus equi ATCC 33707]
gi|311889466|emb|CBH48783.1| putative signal peptidase II [Rhodococcus equi 103S]
gi|325554652|gb|EGD24326.1| signal peptidase II [Rhodococcus equi ATCC 33707]
Length=210
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/178 (64%), Positives = 140/178 (79%), Gaps = 8/178 (4%)
Query 21 AGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSG 80
+G A PRR+RML+ +AVVVL LD++TKV+AV L+ P PV IIGDTVT TL+RN G
Sbjct 37 SGSGTVAARPRRMRMLVVIAVVVLALDLLTKVLAVALIDPRDPVRIIGDTVTLTLIRNPG 96
Query 81 AAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPG 140
AAFSMATG TW+LTL+A GVV+G+ +GR L SPWWALGLG++LGGA+GNL+DR FR+PG
Sbjct 97 AAFSMATGMTWLLTLVAVGVVIGVIRIGRTLRSPWWALGLGLVLGGALGNLIDRIFRSPG 156
Query 141 PLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGDTVGRR 198
PL+GHVVDF+SVGWWPVFNVAD S+V GA+LLV L++FG + GD V R+
Sbjct 157 PLQGHVVDFVSVGWWPVFNVADSSIVCGAVLLVALTLFGIE--------PSGDKVSRK 206
>gi|302528437|ref|ZP_07280779.1| signal peptidase (SPase) II [Streptomyces sp. AA4]
gi|302437332|gb|EFL09148.1| signal peptidase (SPase) II [Streptomyces sp. AA4]
Length=202
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 123/200 (62%), Gaps = 13/200 (6%)
Query 8 SADPLTSTEEAGGAGEP--------NAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLP 59
S DP S E + EP +AP P RR+ + +VA ++ +D++TK + V L
Sbjct 2 STDPSPSESEVEPSAEPPEQEAAGGDAPLPKRRVWAVFAVAALLWAIDLITKNLVVANLE 61
Query 60 PGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALG 119
+P I+G + + RN GAAFSMATG TWVL L+A GVV+ I W+ RRL S WA+G
Sbjct 62 GKEPKPILGGLIYLQVTRNPGAAFSMATGMTWVLALVAIGVVIAIVWISRRLRSVGWAIG 121
Query 120 LGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSV-----GWWPVFNVADPSVVGGAILLVI 174
LG++L GA+GNL DRFFR PGPLRGHVVDF+S + +FN+AD ++ G L+V+
Sbjct 122 LGLVLAGALGNLTDRFFREPGPLRGHVVDFISAFVPNGQGFAIFNIADSAICVGGALIVL 181
Query 175 LSIFGFDFDTVGRRHADGDT 194
LS+ G D+D R D+
Sbjct 182 LSLLGKDYDGTSTRGKKKDS 201
>gi|111018086|ref|YP_701058.1| lipoprotein signal peptidase [Rhodococcus jostii RHA1]
gi|123145352|sp|Q0SHT6.1|LSPA_RHOSR RecName: Full=Lipoprotein signal peptidase; AltName: Full=Prolipoprotein
signal peptidase; AltName: Full=Signal peptidase
II; Short=SPase II
gi|110817616|gb|ABG92900.1| probable signal peptidase II [Rhodococcus jostii RHA1]
Length=198
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/189 (58%), Positives = 138/189 (74%), Gaps = 8/189 (4%)
Query 3 DEPTGSADPLTSTE---EAGGAGEPNAPAPPR-----RLRMLLSVAVVVLTLDIVTKVVA 54
D+ S DP E E +P+ APP+ R +L +A VVL D++TK++A
Sbjct 2 DDERVSQDPTAENETDAEDRNDDDPSGSAPPQPVTHQRRLLLFVIAGVVLATDLLTKILA 61
Query 55 VQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSP 114
V + PG+PV +IGD V+ LVRN GAAFSMATG TW+LTL+A GVV+G+ +GR L SP
Sbjct 62 VANIEPGRPVWLIGDIVSLRLVRNPGAAFSMATGMTWLLTLVAVGVVIGVVRIGRTLRSP 121
Query 115 WWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVI 174
WWALGLG++LGGA+GNLVDRFFRAPG ++GHVVDF+SVGWWPVFNVAD +V GAILLV+
Sbjct 122 WWALGLGLVLGGALGNLVDRFFRAPGVMQGHVVDFVSVGWWPVFNVADSGIVCGAILLVV 181
Query 175 LSIFGFDFD 183
L++ G + D
Sbjct 182 LTLIGLEPD 190
>gi|258653361|ref|YP_003202517.1| lipoprotein signal peptidase [Nakamurella multipartita DSM 44233]
gi|258556586|gb|ACV79528.1| lipoprotein signal peptidase [Nakamurella multipartita DSM 44233]
Length=212
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/192 (49%), Positives = 126/192 (66%), Gaps = 6/192 (3%)
Query 9 ADPL-TSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSII 67
ADP + A A + P PR++ +L ++A V+ LD+++KV+ V + P QPV ++
Sbjct 20 ADPTPAQSTPADPASTDSTPLKPRKVGLLAAIAATVIVLDVISKVIVVATIQPNQPVRVL 79
Query 68 GDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGA 127
G V +L+RN GAAFSMATG TW+L LIA GVVV I M RL S WA+ LG++LGGA
Sbjct 80 GGLVYLSLIRNPGAAFSMATGMTWLLALIAIGVVVVIIRMAPRLRSTPWAISLGLVLGGA 139
Query 128 MGNLVDRFFRAPGPLRGHVVDFLSV-----GWWPVFNVADPSVVGGAILLVILSIFGFDF 182
+GNL+DR FRAPG L+GHVVDF+SV ++PVFNVAD ++ G I LVI ++ G DF
Sbjct 140 IGNLIDRIFRAPGFLQGHVVDFVSVFGPNAEYFPVFNVADSAITIGGISLVITALLGIDF 199
Query 183 DTVGRRHADGDT 194
D R D+
Sbjct 200 DGTRTRSRKDDS 211
>gi|284030830|ref|YP_003380761.1| lipoprotein signal peptidase [Kribbella flavida DSM 17836]
gi|283810123|gb|ADB31962.1| lipoprotein signal peptidase [Kribbella flavida DSM 17836]
Length=258
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/168 (46%), Positives = 108/168 (65%), Gaps = 3/168 (1%)
Query 30 PRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGY 89
PR + + V ++VL LD +TKV+A+Q L PG+PV++IG + + L+RN GAAFS+ + +
Sbjct 80 PRLIALFAIVGLLVLGLDQLTKVLALQHLTPGEPVNVIGSLLRFNLIRNPGAAFSLGSDF 139
Query 90 TWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDF 149
T V++ I V +G+ W+ RR+ S WA+ G++ GGA+GN+ DR FR P P GHVVDF
Sbjct 140 TPVISAIQITVALGVIWLSRRVGSAGWAVAFGLLFGGAVGNITDRIFREPSPFHGHVVDF 199
Query 150 LSVGWWPVFNVADPSVVGGAILLVILSIFGFDFD---TVGRRHADGDT 194
L W +FNVAD +V A LLVI ++ G D VG + D DT
Sbjct 200 LQTPNWAIFNVADMAVTSAAALLVIQTLRGIRLDGTKDVGSKPMDTDT 247
>gi|291301468|ref|YP_003512746.1| lipoprotein signal peptidase [Stackebrandtia nassauensis DSM
44728]
gi|290570688|gb|ADD43653.1| lipoprotein signal peptidase [Stackebrandtia nassauensis DSM
44728]
Length=195
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/162 (50%), Positives = 110/162 (68%), Gaps = 9/162 (5%)
Query 31 RRLRMLL---SVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMAT 87
RR R+LL +VAV + +D V+K++ VQ + P +PV ++G + +L RNSGAAFSMA+
Sbjct 20 RRSRLLLLFAAVAVSSIVIDAVSKIIVVQTVDPAKPVKLLGGAIYLSLTRNSGAAFSMAS 79
Query 88 GYTWVLTLIATGVVVGIFWMG-RRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHV 146
YTW L+L+A VV I W RRL S WA+ LG+I GGA+GN+VDR FR PG L GHV
Sbjct 80 DYTWALSLVAITVVCLIVWYAFRRLGSVGWAIALGLIAGGALGNIVDRMFRQPGFLHGHV 139
Query 147 VDFLSV-----GWWPVFNVADPSVVGGAILLVILSIFGFDFD 183
VDF+S+ G+W +FN+AD S+V G L+++L + G D
Sbjct 140 VDFISLFHPAGGYWAIFNLADSSLVVGVALVILLEVRGRRVD 181
>gi|226360215|ref|YP_002777993.1| lipoprotein signal peptidase [Rhodococcus opacus B4]
gi|226238700|dbj|BAH49048.1| signal peptidase II [Rhodococcus opacus B4]
Length=193
Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/170 (58%), Positives = 124/170 (73%), Gaps = 2/170 (1%)
Query 3 DEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLL--SVAVVVLTLDIVTKVVAVQLLPP 60
+PT + G AP P + R LL ++A +L D++TK++AV + P
Sbjct 3 QDPTAENETDAEDRNDGDTSGAVAPRPAKHQRRLLLFAIAGAILATDLLTKILAVANIEP 62
Query 61 GQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGL 120
G+PV +IGD V+ LVRN GAAFSMATG TW+LTL+A GVV+G+ +GR L SPWWALGL
Sbjct 63 GRPVWLIGDVVSLRLVRNPGAAFSMATGMTWLLTLVAVGVVIGVVRIGRTLRSPWWALGL 122
Query 121 GMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAI 170
G++LGGA+GNLVDRFFRAPG ++GHVVDF+SVGWWPVFNVAD ++V GAI
Sbjct 123 GLVLGGALGNLVDRFFRAPGVMQGHVVDFVSVGWWPVFNVADSAIVCGAI 172
>gi|297559887|ref|YP_003678861.1| lipoprotein signal peptidase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844335|gb|ADH66355.1| lipoprotein signal peptidase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=204
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/172 (49%), Positives = 114/172 (67%), Gaps = 8/172 (4%)
Query 12 LTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTV 71
+T+T++ G A PRR +LL VA+ + +D +TK + G+ + +IGD V
Sbjct 1 MTTTDKTG--------ARPRRYLLLLLVALAAIGVDFLTKEWVLATFAEGEYLDVIGDFV 52
Query 72 TWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNL 131
+TLV N+GAAFSM T +TWV T IA+ VV+ I +MG R+ S WW + LG+++GGA GNL
Sbjct 53 QFTLVFNTGAAFSMGTDFTWVFTCIASIVVLVIGYMGLRVRSVWWGVTLGLMMGGAAGNL 112
Query 132 VDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFD 183
VDRFFR P P G VVDF+SVG +PVFN+AD VV GA L+V L+ G + D
Sbjct 113 VDRFFRDPAPFHGAVVDFISVGTFPVFNIADSCVVVGACLVVALTFKGLNLD 164
>gi|319949598|ref|ZP_08023641.1| lipoprotein signal peptidase [Dietzia cinnamea P4]
gi|319436735|gb|EFV91812.1| lipoprotein signal peptidase [Dietzia cinnamea P4]
Length=200
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/180 (54%), Positives = 125/180 (70%), Gaps = 7/180 (3%)
Query 17 EAGGAGEPN-APAPPRRLR----MLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTV 71
+A GA P A P R ++L++A VV+ +D VTKV+AV L +P+ +IGDTV
Sbjct 10 DAAGASTPGPRAAAPGYFRAGPVVMLAIAGVVVLIDQVTKVLAVVNLENARPIELIGDTV 69
Query 72 TWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNL 131
L+RN GAAFSM T +T VL+++AT VV+G+ W RR+ S WWA GLG+ILGGA GNL
Sbjct 70 RLVLLRNPGAAFSMGTEFTVVLSVVATVVVLGLLWFSRRVHSTWWAWGLGLILGGAAGNL 129
Query 132 VDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHAD 191
VDR+ RAPG L+GHVVDF+SVGWWPVFNVAD +V G I++ + + DFD G R +D
Sbjct 130 VDRYVRAPGILQGHVVDFMSVGWWPVFNVADSCLVAGVIVVAVAVLRNIDFD--GSRVSD 187
>gi|312196233|ref|YP_004016294.1| lipoprotein signal peptidase [Frankia sp. EuI1c]
gi|311227569|gb|ADP80424.1| lipoprotein signal peptidase [Frankia sp. EuI1c]
Length=250
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/181 (50%), Positives = 115/181 (64%), Gaps = 4/181 (2%)
Query 16 EEAGGAGEPNAPAPPRR--LRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTW 73
E GG P AP P R +R+LL+ AV ++ LD +TK++ V L PV++I +
Sbjct 56 ELRGGGSAPRAPRPVARTPVRVLLATAVGIVLLDAITKIIVVATLSNHAPVTLIPGVLQL 115
Query 74 TLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVD 133
L RNSGAAFS+ G T + +LIA VVV + RRL S WA+ LG I+GGA+GNLVD
Sbjct 116 ELTRNSGAAFSIGGGATVLFSLIAVAVVVIVARTARRLASVAWAVVLGAIVGGAVGNLVD 175
Query 134 RFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGD 193
R RAPGPLRGHVVD++ + WP+FNVAD S+V A+L VILS G D G R++ D
Sbjct 176 RLVRAPGPLRGHVVDWIYLHHWPIFNVADSSIVIAAVLAVILSALGIGLD--GGRYSRAD 233
Query 194 T 194
Sbjct 234 Q 234
>gi|326333483|ref|ZP_08199725.1| signal peptidase II [Nocardioidaceae bacterium Broad-1]
gi|325948728|gb|EGD40826.1| signal peptidase II [Nocardioidaceae bacterium Broad-1]
Length=202
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/176 (42%), Positives = 102/176 (58%), Gaps = 0/176 (0%)
Query 24 PNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAF 83
P + P R +VAV++L +D +TK+ AV L PGQP +IG + ++RN GAAF
Sbjct 19 PESDVRPVRWAEFATVAVLLLVIDQLTKLWAVATLVPGQPQELIGSVLQLNIIRNPGAAF 78
Query 84 SMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLR 143
S TG+TW T ++ +G+ W RR WA LG+++ G GNL+DR R PG
Sbjct 79 STGTGFTWFFTTLSIVATIGVLWFARRARHRGWAFALGILVAGISGNLIDRLLREPGFYV 138
Query 144 GHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRHADGDTVGRRK 199
GHVVDFL + WP+FNVAD + A+++VILS G D R A+ T G+ +
Sbjct 139 GHVVDFLQLPNWPIFNVADMCINVAAVMIVILSFKGIGLDGTVDRGAEEKTDGKTE 194
>gi|269127124|ref|YP_003300494.1| peptidase A8 signal peptidase II [Thermomonospora curvata DSM
43183]
gi|268312082|gb|ACY98456.1| peptidase A8 signal peptidase II [Thermomonospora curvata DSM
43183]
Length=193
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/149 (54%), Positives = 101/149 (68%), Gaps = 0/149 (0%)
Query 35 MLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLT 94
ML+SVA+ L LD +TKVV V L G P+ ++G +T + RNSGAAFS+ TG T V T
Sbjct 1 MLISVALTALALDAITKVVVVAHLEGGTPIELLGGLLTLRVTRNSGAAFSIGTGMTIVFT 60
Query 95 LIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGW 154
LIA GVVV I R L S WA+ LG++LGGA GNL DR RAP PL+GHVVD++ + +
Sbjct 61 LIALGVVVAILRTARHLRSVPWAVSLGLLLGGATGNLADRLLRAPAPLKGHVVDWIELPY 120
Query 155 WPVFNVADPSVVGGAILLVILSIFGFDFD 183
WPVFN+AD ++V G L V+L+ G D
Sbjct 121 WPVFNLADSAIVCGGALAVVLAARGLQLD 149
>gi|256379747|ref|YP_003103407.1| lipoprotein signal peptidase [Actinosynnema mirum DSM 43827]
gi|255924050|gb|ACU39561.1| lipoprotein signal peptidase [Actinosynnema mirum DSM 43827]
Length=254
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/182 (52%), Positives = 120/182 (66%), Gaps = 6/182 (3%)
Query 8 SADPLTSTEEAGGAGEPN-APAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSI 66
S DP T + P P P RR+ +L +A VVL LDI TKVVAV L QPV +
Sbjct 8 STDPNTEPDAPDEVASPAPEPQPQRRVVLLGVIAAVVLALDIATKVVAVAELEGRQPVEL 67
Query 67 IGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGG 126
G + L+RN GAAF MA G+T VL +IA GVV I W+ R+L S WA+GLG++LGG
Sbjct 68 FGGLLYLPLIRNPGAAFGMAEGWTIVLAIIAFGVVGFILWIARKLRSVGWAIGLGLVLGG 127
Query 127 AMGNLVDRFFRAPGPLRGHVVDFLSV-----GWWPVFNVADPSVVGGAILLVILSIFGFD 181
A+GNL DR FR+PGPLRGHVVDFLSV G++PVFN+AD ++ G ++V++S+ D
Sbjct 128 ALGNLADRIFRSPGPLRGHVVDFLSVLDPWGGFFPVFNLADSAICVGGGVIVLMSLLQRD 187
Query 182 FD 183
+D
Sbjct 188 YD 189
>gi|317508657|ref|ZP_07966313.1| signal peptidase II [Segniliparus rugosus ATCC BAA-974]
gi|316253060|gb|EFV12474.1| signal peptidase II [Segniliparus rugosus ATCC BAA-974]
Length=192
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/173 (53%), Positives = 112/173 (65%), Gaps = 9/173 (5%)
Query 25 NAPAPPRR----LRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSG 80
AP P+ +R+L +VA +V D+ +K AV L P +P ++G + LVRNSG
Sbjct 20 QAPKDPKSRVAAVRLLFAVASLVALADLASKAAAVAYLDPERPERLLGGALWLVLVRNSG 79
Query 81 AAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPG 140
AAFSMATGYTWVLT IA VV I M R L S WWALGLG++LGGA GNLVDR FRAP
Sbjct 80 AAFSMATGYTWVLTAIAVAAVVVIVRMSRALGSLWWALGLGLVLGGAFGNLVDRVFRAPA 139
Query 141 PLRGHVVDFLSV-----GWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRR 188
P RG VVDFLS+ W VFN+AD ++V GA+L+V LS FG + + R
Sbjct 140 PFRGQVVDFLSLFSDHGEGWAVFNLADSAIVCGAVLMVALSFFGVEHSSGQER 192
>gi|152967133|ref|YP_001362917.1| lipoprotein signal peptidase [Kineococcus radiotolerans SRS30216]
gi|151361650|gb|ABS04653.1| lipoprotein signal peptidase [Kineococcus radiotolerans SRS30216]
Length=197
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/171 (49%), Positives = 106/171 (62%), Gaps = 10/171 (5%)
Query 27 PAPP----RRLRMLLSVAVV---VLTLDIVTKVVAV-QLLPPGQPVSIIGDTVTWTLVRN 78
P+PP RR R L A+V V LD VTKV+AV L+ G P ++GD + L+RN
Sbjct 16 PSPPGTDDRRPRYALWTALVWAVVYALDQVTKVLAVANLVEEGDPQPLVGDLLQLHLIRN 75
Query 79 SGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRA 138
GAAF ATG+TW+ T++A VVV + M R+L S WAL G +L GA GNL DR R
Sbjct 76 PGAAFGFATGFTWIFTVLAAVVVVVVVRMSRKLRSLPWALAFGFLLAGATGNLTDRLLRE 135
Query 139 PGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFDTVGRRH 189
PG RGHVVDFL + WP+FNVAD S+ A+L+ +L++ G D GRR
Sbjct 136 PGFARGHVVDFLQLPHWPIFNVADASICTAAVLIAVLAVRGTGLD--GRRE 184
>gi|300784874|ref|YP_003765165.1| signal peptidase II [Amycolatopsis mediterranei U32]
gi|299794388|gb|ADJ44763.1| signal peptidase II [Amycolatopsis mediterranei U32]
gi|340526303|gb|AEK41508.1| signal peptidase II [Amycolatopsis mediterranei S699]
Length=260
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/190 (47%), Positives = 119/190 (63%), Gaps = 10/190 (5%)
Query 4 EPTGSADPLTSTEEAGGAGE-PNAPAPP----RRLRMLLSVAVVVLTLDIVTKVVAVQLL 58
EP +A + A A E P PA P RR+ + +VAVV +D+VTK + V L
Sbjct 45 EPDTAAPADAVPDPAADAPENPEIPAKPLLPKRRVGWVFAVAVVFWAIDLVTKNLVVANL 104
Query 59 PPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWAL 118
+PV ++G + ++RN GAAFSMATG TWVL L+A VV+ I W+ RRL S WA+
Sbjct 105 EGKEPVKVLGGLIYLQVIRNPGAAFSMATGMTWVLALVALAVVIAIIWLSRRLRSIGWAI 164
Query 119 GLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSV-----GWWPVFNVADPSVVGGAILLV 173
GLG++L GA GNL DR FRAPG L+GHVVDF+S + +FN+AD ++ G L+V
Sbjct 165 GLGLVLAGATGNLTDRIFRAPGGLQGHVVDFISAFAPNGKGFAIFNIADSAICVGGALIV 224
Query 174 ILSIFGFDFD 183
+LS+ G D+D
Sbjct 225 LLSLLGKDYD 234
>gi|158316844|ref|YP_001509352.1| lipoprotein signal peptidase [Frankia sp. EAN1pec]
gi|158112249|gb|ABW14446.1| lipoprotein signal peptidase [Frankia sp. EAN1pec]
Length=243
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/144 (53%), Positives = 97/144 (68%), Gaps = 0/144 (0%)
Query 40 AVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATG 99
A+ ++ LDI TK++AV L P+ II + L RNSGAAFS+A G T +L+LIA
Sbjct 63 ALCLIVLDIGTKLLAVAQLTGRAPIEIIPGVLDLRLTRNSGAAFSLAGGATVILSLIALA 122
Query 100 VVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFN 159
VV + RRL S WA G ++GGA+GNL+DR FRAPGPLRGHVVDF+ + WP+FN
Sbjct 123 VVAVVVVTARRLASIGWAFVFGAMVGGALGNLIDRLFRAPGPLRGHVVDFVHIHHWPIFN 182
Query 160 VADPSVVGGAILLVILSIFGFDFD 183
VAD ++V G +L VILS+ G D
Sbjct 183 VADSAIVCGGVLAVILSLRGIGLD 206
>gi|86740131|ref|YP_480531.1| lipoprotein signal peptidase [Frankia sp. CcI3]
gi|86566993|gb|ABD10802.1| signal peptidase II. Aspartic peptidase. MEROPS family A08 [Frankia
sp. CcI3]
Length=201
Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/185 (51%), Positives = 117/185 (64%), Gaps = 3/185 (1%)
Query 8 SADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAV-VVLTLDIVTKVVAVQLLPPGQPVSI 66
SA P ST G E A RR L+VA +VL DI+TK VAV L PV +
Sbjct 6 SAPPGGSTPVPHGRDEARPTAGSRRAVATLTVAAAIVLLSDILTKHVAVATLSDRGPVEV 65
Query 67 IGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGG 126
I + L RNSGAAFS+A G T +L+L+A VV + + RRL S WAL LG +LGG
Sbjct 66 IPGLLDLELTRNSGAAFSLAGGATVLLSLVALAVVAVVVFTARRLRSVGWALVLGALLGG 125
Query 127 AMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDFDTVG 186
A+GNL DR FRAPGPLRGHVVDF+ + +WP+FNVAD ++V G +L VILS+ G D G
Sbjct 126 AVGNLADRLFRAPGPLRGHVVDFVHLHYWPIFNVADSAIVCGGVLAVILSLRGVGLD--G 183
Query 187 RRHAD 191
R+A+
Sbjct 184 TRYAE 188
>gi|288923210|ref|ZP_06417352.1| lipoprotein signal peptidase [Frankia sp. EUN1f]
gi|288345446|gb|EFC79833.1| lipoprotein signal peptidase [Frankia sp. EUN1f]
Length=229
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/150 (52%), Positives = 103/150 (69%), Gaps = 1/150 (0%)
Query 35 MLLSV-AVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATGYTWVL 93
M+++V AV ++ LD+VTK++AV L PV II + L RNSGAAFS+A G T L
Sbjct 1 MIVAVTAVCLIVLDVVTKMLAVANLSGRGPVEIIPGALDLRLTRNSGAAFSLAGGATVFL 60
Query 94 TLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVG 153
+L+A VVV + RRL S WA G ++GGA+GNL+DR FRAPGPLRGHVVDF+ +
Sbjct 61 SLVALAVVVVVGLTARRLASTGWAFVFGAMVGGAVGNLIDRIFRAPGPLRGHVVDFVHIH 120
Query 154 WWPVFNVADPSVVGGAILLVILSIFGFDFD 183
WP+FN+AD ++V G +L V+LS+ G D
Sbjct 121 HWPIFNLADSAIVCGGVLAVVLSLLGIGLD 150
>gi|320531631|ref|ZP_08032573.1| signal peptidase II [Actinomyces sp. oral taxon 171 str. F0337]
gi|320136160|gb|EFW28166.1| signal peptidase II [Actinomyces sp. oral taxon 171 str. F0337]
Length=267
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/181 (45%), Positives = 111/181 (62%), Gaps = 2/181 (1%)
Query 3 DEPTGSADPLTSTEEAGGAGEPNAPAPPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQ 62
D P + + +E G AG P + +L VAV ++ +D TK A+ L G+
Sbjct 33 DNPFSAMERSMKPQENGEAGRKWFKRLP--VIVLWLVAVAIIIVDQATKQWALSALADGR 90
Query 63 PVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGM 122
+++IG + LVRN GAAFS ATG TWV LIA+ VVV I + R L S WA+ LG+
Sbjct 91 HMALIGHALGLVLVRNPGAAFSFATGQTWVFALIASLVVVIIIRVSRNLASRSWAVALGL 150
Query 123 ILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFDF 182
+LGGA+GNL+DR R PG LRGHV+DF+ G + V NVAD ++V A ++ILS+ G++
Sbjct 151 VLGGAVGNLIDRLLREPGFLRGHVIDFIDYGGYFVGNVADIAIVLAAAGIIILSLGGWEI 210
Query 183 D 183
D
Sbjct 211 D 211
>gi|256825467|ref|YP_003149427.1| lipoprotein signal peptidase [Kytococcus sedentarius DSM 20547]
gi|256688860|gb|ACV06662.1| lipoprotein signal peptidase [Kytococcus sedentarius DSM 20547]
Length=207
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/161 (48%), Positives = 106/161 (66%), Gaps = 3/161 (1%)
Query 24 PNAPAPPRR---LRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSG 80
P++ P RR L ++ +A V + +D VTK A+ L G+ V ++G+ + LV N G
Sbjct 15 PSSDRPTRRRGHLPLVAGLATVWVVVDQVTKEWALARLDRGEAVPVLGELLQLRLVFNPG 74
Query 81 AAFSMATGYTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPG 140
AAFS+ T T V T++AT V + I W R+++SP W + LG+I GGA+GNLVDR RAPG
Sbjct 75 AAFSLGTSATPVFTVLATVVSLAILWFSRQVISPAWGVALGLIAGGAVGNLVDRLVRAPG 134
Query 141 PLRGHVVDFLSVGWWPVFNVADPSVVGGAILLVILSIFGFD 181
RGHVVDFL++ WPVFNVAD V GA L+V+L++ G +
Sbjct 135 FARGHVVDFLALPNWPVFNVADIGVTCGAALVVLLALRGIE 175
>gi|315504974|ref|YP_004083861.1| lipoprotein signal peptidase [Micromonospora sp. L5]
gi|315411593|gb|ADU09710.1| lipoprotein signal peptidase [Micromonospora sp. L5]
Length=178
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/149 (48%), Positives = 96/149 (65%), Gaps = 2/149 (1%)
Query 29 PPRRLRMLLSVAVVVLTLDIVTKVVAVQLLPPGQPVSIIGDTVTWTLVRNSGAAFSMATG 88
PP+R+ L AV L +D+ +K AV LP G+ V + + L RN GAAFS+ TG
Sbjct 7 PPQRVAWLAGAAVTALAVDVASKSAAVAWLP-GRSVDLFAG-LALRLTRNPGAAFSIGTG 64
Query 89 YTWVLTLIATGVVVGIFWMGRRLVSPWWALGLGMILGGAMGNLVDRFFRAPGPLRGHVVD 148
T V T++A V+ GI W GR++ WA+ LG+I GGA GNLVDR FR+PG RGHVVD
Sbjct 65 ITPVFTVVAVAVIAGISWYGRKVTHRGWAVALGLIAGGAAGNLVDRLFRSPGLGRGHVVD 124
Query 149 FLSVGWWPVFNVADPSVVGGAILLVILSI 177
FL + WWP FN+AD +++ G + + LS+
Sbjct 125 FLHLDWWPTFNLADSALICGVAVAMWLSL 153
Lambda K H
0.323 0.142 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 220408776486
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40