BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1541c Length=197 Score E Sequences producing significant alignments: (Bits) Value gi|15608679|ref|NP_216057.1| lipoprotein LprI [Mycobacterium tub... 407 6e-112 gi|298525053|ref|ZP_07012462.1| conserved hypothetical protein [... 372 2e-101 gi|339294516|gb|AEJ46627.1| lipoprotein LprI [Mycobacterium tube... 324 4e-87 gi|118617191|ref|YP_905523.1| lipoprotein, LprL [Mycobacterium u... 263 1e-68 gi|183982377|ref|YP_001850668.1| lipoprotein, LprL [Mycobacteriu... 260 7e-68 gi|296164418|ref|ZP_06846992.1| lipoprotein, LprL [Mycobacterium... 233 1e-59 gi|333920039|ref|YP_004493620.1| lipoprotein, LprL [Amycolicicoc... 179 3e-43 gi|90413313|ref|ZP_01221307.1| hypothetical protein P3TCK_17099 ... 119 2e-25 gi|269104399|ref|ZP_06157095.1| lipoprotein putative [Photobacte... 117 9e-25 gi|54308436|ref|YP_129456.1| hypothetical protein PBPRA1243 [Pho... 116 1e-24 gi|212633155|ref|YP_002309680.1| lipoprotein [Shewanella piezoto... 107 1e-21 gi|157963738|ref|YP_001503772.1| hypothetical protein Spea_3927 ... 105 4e-21 gi|167622285|ref|YP_001672579.1| hypothetical protein Shal_0344 ... 103 2e-20 gi|146291219|ref|YP_001181643.1| hypothetical protein Sputcn32_0... 100 1e-19 gi|120600746|ref|YP_965320.1| hypothetical protein Sputw3181_396... 99.0 4e-19 gi|24371712|ref|NP_715754.1| hypothetical protein SO_0112 [Shewa... 97.8 7e-19 gi|70730382|ref|YP_260123.1| hypothetical protein PFL_3017 [Pseu... 93.2 2e-17 gi|34495837|ref|NP_900052.1| hypothetical protein CV_0382 [Chrom... 93.2 2e-17 gi|152998664|ref|YP_001364345.1| hypothetical protein Shew185_01... 92.8 3e-17 gi|160873242|ref|YP_001552558.1| hypothetical protein Sbal195_01... 91.3 7e-17 gi|114045621|ref|YP_736171.1| hypothetical protein Shewmr7_0108 ... 90.9 1e-16 gi|217971328|ref|YP_002356079.1| hypothetical protein Sbal223_01... 90.1 1e-16 gi|117918571|ref|YP_867763.1| hypothetical protein Shewana3_0113... 87.8 8e-16 gi|145300412|ref|YP_001143253.1| hypothetical protein ASA_3537 [... 85.9 3e-15 gi|330828395|ref|YP_004391347.1| hypothetical protein B565_0695 ... 85.1 5e-15 gi|127514274|ref|YP_001095471.1| hypothetical protein Shew_3346 ... 82.8 3e-14 gi|334705755|ref|ZP_08521621.1| hypothetical protein AcavA_17188... 82.4 3e-14 gi|39995863|ref|NP_951814.1| lipoprotein [Geobacter sulfurreduce... 79.0 4e-13 gi|118588851|ref|ZP_01546259.1| hypothetical protein SIAM614_191... 77.8 8e-13 gi|119773641|ref|YP_926381.1| hypothetical protein Sama_0501 [Sh... 77.0 1e-12 gi|148547968|ref|YP_001268070.1| hypothetical protein Pput_2752 ... 76.3 3e-12 gi|338973912|ref|ZP_08629274.1| putative lipoprotein [Bradyrhizo... 72.0 5e-11 gi|329847586|ref|ZP_08262614.1| hypothetical protein ABI_06520 [... 71.6 6e-11 gi|226944379|ref|YP_002799452.1| lipoprotein [Azotobacter vinela... 68.6 5e-10 gi|330446354|ref|ZP_08310006.1| putative uncharacterized protein... 68.2 6e-10 gi|110678670|ref|YP_681677.1| hypothetical protein RD1_1349 [Ros... 67.8 8e-10 gi|260429484|ref|ZP_05783461.1| conserved hypothetical protein [... 65.9 3e-09 gi|126728412|ref|ZP_01744228.1| hypothetical protein SSE37_20517... 63.9 1e-08 gi|88800326|ref|ZP_01115892.1| hypothetical protein MED297_00450... 63.9 1e-08 gi|218887180|ref|YP_002436501.1| hypothetical protein DvMF_2090 ... 63.2 2e-08 gi|189499720|ref|YP_001959190.1| hypothetical protein Cphamn1_07... 61.6 5e-08 gi|170698251|ref|ZP_02889328.1| conserved hypothetical protein [... 60.5 1e-07 gi|113968458|ref|YP_732251.1| hypothetical protein Shewmr4_0113 ... 60.5 1e-07 gi|94312934|ref|YP_586143.1| putative lipoprotein [Cupriavidus m... 60.1 2e-07 gi|339504920|ref|YP_004692340.1| hypothetical protein RLO149_c03... 57.0 1e-06 gi|318041588|ref|ZP_07973544.1| hypothetical protein SCB01_07747... 57.0 2e-06 gi|84687965|ref|ZP_01015829.1| lipoprotein, putative [Maritimiba... 57.0 2e-06 gi|313145035|ref|ZP_07807228.1| conserved hypothetical protein [... 55.5 4e-06 gi|84501005|ref|ZP_00999240.1| hypothetical protein OB2597_02682... 55.1 5e-06 gi|114764434|ref|ZP_01443660.1| hypothetical protein 11000110013... 55.1 5e-06 >gi|15608679|ref|NP_216057.1| lipoprotein LprI [Mycobacterium tuberculosis H37Rv] gi|15841008|ref|NP_336045.1| hypothetical protein MT1593 [Mycobacterium tuberculosis CDC1551] gi|31792727|ref|NP_855220.1| lipoprotein LprI [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=197 Score = 407 bits (1045), Expect = 6e-112, Method: Compositional matrix adjust. Identities = 197/197 (100%), Positives = 197/197 (100%), Gaps = 0/197 (0%) Query 1 MRWIGVLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLS 60 MRWIGVLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLS Sbjct 1 MRWIGVLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLS 60 Query 61 TAYQQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATP 120 TAYQQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATP Sbjct 61 TAYQQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATP 120 Query 121 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ 180 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ Sbjct 121 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ 180 Query 181 GEVRLDFHGATFVCRTS 197 GEVRLDFHGATFVCRTS Sbjct 181 GEVRLDFHGATFVCRTS 197 >gi|298525053|ref|ZP_07012462.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494847|gb|EFI30141.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=185 Score = 372 bits (955), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 184/197 (94%), Positives = 184/197 (94%), Gaps = 12/197 (6%) Query 1 MRWIGVLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLS 60 MRWIGVLVTALVLSACAANPPANTTSPTAGQSLD HDRQLTSLDHRLS Sbjct 1 MRWIGVLVTALVLSACAANPPANTTSPTAGQSLDS------------HDRQLTSLDHRLS 48 Query 61 TAYQQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATP 120 TAYQQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATP Sbjct 49 TAYQQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATP 108 Query 121 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ 180 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ Sbjct 109 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ 168 Query 181 GEVRLDFHGATFVCRTS 197 GEVRLDFHGATFVCRTS Sbjct 169 GEVRLDFHGATFVCRTS 185 >gi|339294516|gb|AEJ46627.1| lipoprotein LprI [Mycobacterium tuberculosis CCDC5079] gi|339298152|gb|AEJ50262.1| lipoprotein LprI [Mycobacterium tuberculosis CCDC5180] Length=156 Score = 324 bits (831), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 155/156 (99%), Positives = 156/156 (100%), Gaps = 0/156 (0%) Query 42 VQQLVCHDRQLTSLDHRLSTAYQQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQE 101 +QQLVCHDRQLTSLDHRLSTAYQQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQE Sbjct 1 MQQLVCHDRQLTSLDHRLSTAYQQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQE 60 Query 102 AYQTRLVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVE 161 AYQTRLVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVE Sbjct 61 AYQTRLVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVE 120 Query 162 LSGSGARYGRQGIEYWEHQGEVRLDFHGATFVCRTS 197 LSGSGARYGRQGIEYWEHQGEVRLDFHGATFVCRTS Sbjct 121 LSGSGARYGRQGIEYWEHQGEVRLDFHGATFVCRTS 156 >gi|118617191|ref|YP_905523.1| lipoprotein, LprL [Mycobacterium ulcerans Agy99] gi|118569301|gb|ABL04052.1| lipoprotein, LprL [Mycobacterium ulcerans Agy99] Length=211 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 134/211 (64%), Positives = 153/211 (73%), Gaps = 14/211 (6%) Query 1 MRWIGVLVTALVLSACAA-------NPPANTTS-----PTAGQSLDCTKPATIVQQLVCH 48 MR I ++ AL LSAC++ + PA TTS TA LDCT P Q+LVC+ Sbjct 1 MRLIALIGAALALSACSSATTHSTPDSPAGTTSGSQPTSTAAPLLDCTNPEDDTQRLVCN 60 Query 49 DRQLTSLDHRLSTAYQQALAH--RRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTR 106 D QLT LD RL TAYQQAL AAL AQ W RD CAQD D RTC+QE+YQTR Sbjct 61 DPQLTELDRRLDTAYQQALDRPGTDKAALTLAQGHWAETRDQCAQDPDMRTCLQESYQTR 120 Query 107 LVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSG 166 L QLAIADPATA PPV++YRCP +DGPLTAQFYN+ DPKTAVL W+GDQ I+FV+LSGSG Sbjct 121 LAQLAIADPATAAPPVISYRCPAEDGPLTAQFYNELDPKTAVLTWRGDQYILFVQLSGSG 180 Query 167 ARYGRQGIEYWEHQGEVRLDFHGATFVCRTS 197 ARYGRQG+EYWEHQGEV+LDFHG FVC T+ Sbjct 181 ARYGRQGVEYWEHQGEVQLDFHGTKFVCTTT 211 >gi|183982377|ref|YP_001850668.1| lipoprotein, LprL [Mycobacterium marinum M] gi|183175703|gb|ACC40813.1| lipoprotein, LprL [Mycobacterium marinum M] Length=211 Score = 260 bits (665), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 132/211 (63%), Positives = 153/211 (73%), Gaps = 14/211 (6%) Query 1 MRWIGVLVTALVLSACAA-------NPPANTTS-----PTAGQSLDCTKPATIVQQLVCH 48 MR I ++ AL LSAC++ + PA TTS TA LDCT P Q+LVC+ Sbjct 1 MRLIALIGAALALSACSSATTHSTPDSPAGTTSGSQPTSTAAPLLDCTNPEDDTQRLVCN 60 Query 49 DRQLTSLDHRLSTAYQQALAH--RRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTR 106 D QLT LD RL TAYQQAL AAL AQ W RD CAQ+ D RTC+QE+YQTR Sbjct 61 DPQLTELDRRLDTAYQQALDRPGTDKAALTLAQGHWAETRDQCAQNPDMRTCLQESYQTR 120 Query 107 LVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSG 166 L QLAIADPATA PPV++YRCP +DGPLTAQFYN+ DPKTAVL W+GDQ ++FV+LSGSG Sbjct 121 LAQLAIADPATAAPPVISYRCPAEDGPLTAQFYNELDPKTAVLTWRGDQYVLFVQLSGSG 180 Query 167 ARYGRQGIEYWEHQGEVRLDFHGATFVCRTS 197 ARYGRQG+EYWEHQGEV+LDFHG FVC T+ Sbjct 181 ARYGRQGVEYWEHQGEVQLDFHGTKFVCTTT 211 >gi|296164418|ref|ZP_06846992.1| lipoprotein, LprL [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900200|gb|EFG79632.1| lipoprotein, LprL [Mycobacterium parascrofulaceum ATCC BAA-614] Length=211 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/165 (68%), Positives = 127/165 (77%), Gaps = 2/165 (1%) Query 33 LDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAHRRS--AALEAAQSSWTMLRDACA 90 LDC KPA QQLVC + LT LDHRL AYQQALA + AAL AAQ++W RD CA Sbjct 45 LDCGKPANAAQQLVCGEPHLTDLDHRLQAAYQQALARPGADQAALTAAQNTWAAARDGCA 104 Query 91 QDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLN 150 Q+ P TC+ EAYQTRLV+LAIADP T +PP++TY+CP GPLTAQFYN+FDP AVLN Sbjct 105 QNPQPGTCLAEAYQTRLVELAIADPGTLSPPLVTYQCPADAGPLTAQFYNEFDPPAAVLN 164 Query 151 WKGDQVIVFVELSGSGARYGRQGIEYWEHQGEVRLDFHGATFVCR 195 WKG+Q I+F E SGSGARYGRQG EYWEHQGEV+LD +G T VCR Sbjct 165 WKGNQEILFQEPSGSGARYGRQGSEYWEHQGEVKLDLNGTTLVCR 209 >gi|333920039|ref|YP_004493620.1| lipoprotein, LprL [Amycolicicoccus subflavus DQS3-9A1] gi|333482260|gb|AEF40820.1| Lipoprotein, LprL [Amycolicicoccus subflavus DQS3-9A1] Length=172 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 83/172 (49%), Positives = 113/172 (66%), Gaps = 5/172 (2%) Query 29 AGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALA--HRRSAALEAAQSSWTMLR 86 A + DC+ P++ ++ LVC D + LD RL++ YQQ L ALEA+Q W R Sbjct 3 AAPTFDCSAPSSEIESLVCTDTDMADLDSRLNSEYQQVLNTPGADKDALEASQIDWQSQR 62 Query 87 DACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGP-LTAQFYNQFDPK 145 + C Q+ DP+ CVQ+AY TRLV+L IADP TA P Y CP DG LTA++YN DP+ Sbjct 63 EECTQEADPKVCVQQAYLTRLVELHIADPTTAAPTEARYNCP--DGEELTARYYNDGDPQ 120 Query 146 TAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQGEVRLDFHGATFVCRTS 197 V W+G++VI+F+E+SGSGARYGR G+ +WEHQGE D++G + VC + Sbjct 121 AGVFTWEGNEVILFIEMSGSGARYGRDGVSFWEHQGEATFDYYGDSVVCEVA 172 >gi|90413313|ref|ZP_01221307.1| hypothetical protein P3TCK_17099 [Photobacterium profundum 3TCK] gi|90325714|gb|EAS42177.1| hypothetical protein P3TCK_17099 [Photobacterium profundum 3TCK] Length=510 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/175 (36%), Positives = 93/175 (54%), Gaps = 8/175 (4%) Query 25 TSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAH---RRSAALEAAQSS 81 TSP S DC K ++ V++ +C D L LD ++ Y+QAL + + ++A Q Sbjct 22 TSP----SFDCDKASSQVEERICTDDALAVLDIKMKKVYEQALQNIPDSERSTMKAMQRG 77 Query 82 WTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQ-DGPLTAQFYN 140 W R+ C + D R CV+ AY++R+V L +A P + + C D P+T FYN Sbjct 78 WIKGRNECWKGQDERACVEYAYKSRIVALQVAGGLIEVPSPVDFDCQNMTDKPVTVVFYN 137 Query 141 QFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQGEVRLDFHGATFVCR 195 Q DP +A++ DQ + F + SGARY Q + WEHQGE L++ G C+ Sbjct 138 QTDPASALITVGDDQALAFSTQTASGARYDGQNVSLWEHQGEASLEWFGTKMQCQ 192 >gi|269104399|ref|ZP_06157095.1| lipoprotein putative [Photobacterium damselae subsp. damselae CIP 102761] gi|268161039|gb|EEZ39536.1| lipoprotein putative [Photobacterium damselae subsp. damselae CIP 102761] Length=192 Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 62/196 (32%), Positives = 101/196 (52%), Gaps = 14/196 (7%) Query 2 RWIGVLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLST 61 R+ L++ L AA P S DCTK ++ V++L+C + +L +LD+ L+T Sbjct 5 RFSLTLLSLFALPTLAATP-----------SFDCTKASSSVEELICSNNELATLDNTLNT 53 Query 62 AYQQALAHRRSAALE---AAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATA 118 Y+QA+A+ S + A Q W R+ C + +D +CV + Y+ R+++L I Sbjct 54 VYKQAMANYPSTEKKQQKAMQRGWIKGRNECWKSSDVLSCVADNYRDRILELQITGGLLK 113 Query 119 TPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWE 178 P +T +C + P+T FYNQ DP + V DQ+I + + SG Y Q +EY E Sbjct 114 APETITLQCNNEKQPVTVAFYNQTDPSSMVFTIGDDQLIAQQQPTASGIHYSGQNLEYIE 173 Query 179 HQGEVRLDFHGATFVC 194 HQG++ + + C Sbjct 174 HQGKIDITYMAKKLHC 189 >gi|54308436|ref|YP_129456.1| hypothetical protein PBPRA1243 [Photobacterium profundum SS9] gi|46912865|emb|CAG19654.1| hypothetical protein PBPRA1243 [Photobacterium profundum SS9] Length=512 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/176 (34%), Positives = 92/176 (53%), Gaps = 8/176 (4%) Query 24 TTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAH---RRSAALEAAQS 80 TTSP S DC K ++ +++ +C D L LD ++ Y+QAL + + +++ Q Sbjct 22 TTSP----SFDCDKASSQIEERICTDDALAVLDMKMEKVYEQALQNIPDSERSIMKSMQR 77 Query 81 SWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQ-DGPLTAQFY 139 W R+ C + D R CV+ AY+ R++ L +A P + + C D P+T FY Sbjct 78 GWIKGRNECWKGQDERACVEYAYKNRIIDLQVAGGLIEVPSPVGFNCQNMADKPVTVVFY 137 Query 140 NQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQGEVRLDFHGATFVCR 195 NQ P +A++ DQ + F + SGARY Q + WEHQGE L++ G C+ Sbjct 138 NQTAPASAMITVGDDQALAFSTRTVSGARYDGQNVSLWEHQGEASLEWFGTKMQCQ 193 >gi|212633155|ref|YP_002309680.1| lipoprotein [Shewanella piezotolerans WP3] gi|212554639|gb|ACJ27093.1| Lipoprotein, putative [Shewanella piezotolerans WP3] Length=189 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/195 (34%), Positives = 97/195 (50%), Gaps = 14/195 (7%) Query 2 RWIGVLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLST 61 +W+ VL L L A AA+P S DC K + V+ L+C+D +L +LD +L+ Sbjct 5 QWL-VLAIFLSLPALAASP-----------SFDCNKASGSVETLICNDAELATLDRQLAQ 52 Query 62 AYQQALAHRRSAAL-EAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATP 120 Y QAL +A +A Q W R+ C + D R C +YQ+R++ L I Sbjct 53 VYHQALPKIPAAQQPKATQRGWIKGRNDCWKSVDVRQCTALSYQSRIIGLQIQSGLIEVS 112 Query 121 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ 180 + + C + +TA +Y+Q DP TAV + Q+I SGSGA+Y Q E+WEH Sbjct 113 ASVVFDC-DEFPQITAVYYSQLDPVTAVFRFNDQQLIASYVSSGSGAKYQGQNFEFWEHH 171 Query 181 GEVRLDFHGATFVCR 195 GE + + + C Sbjct 172 GEASIRYFDTSTKCE 186 >gi|157963738|ref|YP_001503772.1| hypothetical protein Spea_3927 [Shewanella pealeana ATCC 700345] gi|157848738|gb|ABV89237.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345] Length=214 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/188 (34%), Positives = 92/188 (49%), Gaps = 7/188 (3%) Query 14 SACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAHR-RS 72 A P + T T S DC K V+ L+C D +L LD ++ YQQA+ + S Sbjct 25 EATKDQPVKDETHATITPSFDCAKAQGKVETLICDDAELAKLDREMAQVYQQAMVNIPPS 84 Query 73 AALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDG 132 A +A Q W R+ C + D R C + YQ RL++L I + C + Sbjct 85 AQPKATQRGWIKGRNDCWKAQDVRQCTLDNYQIRLIELQIQGRLIEPSSTAVFDCGNR-P 143 Query 133 PLTAQFYNQFDPKTAVLNWK----GDQVIVFVEL-SGSGARYGRQGIEYWEHQGEVRLDF 187 ++A FY Q DP TAV + GDQ ++ + SGSGA+Y + E+WEHQGE + F Sbjct 144 QISAVFYTQVDPVTAVFTFSSEKMGDQQLLATNVRSGSGAKYLGRNFEFWEHQGEASVQF 203 Query 188 HGATFVCR 195 ++ C+ Sbjct 204 FDHSYKCK 211 >gi|167622285|ref|YP_001672579.1| hypothetical protein Shal_0344 [Shewanella halifaxensis HAW-EB4] gi|167352307|gb|ABZ74920.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4] Length=216 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/210 (31%), Positives = 98/210 (47%), Gaps = 21/210 (10%) Query 6 VLVTALVLSACAANPPANTTSPTAGQS--------------LDCTKPATIVQQLVCHDRQ 51 +L+ LVL A ++ A PT S DC K V+ L+CHD + Sbjct 5 ILLGCLVLLAACSSTVATQIKPTQADSELVVPVSDMHVAPTFDCAKAQGQVETLICHDAE 64 Query 52 LTSLDHRLSTAYQQALAHR-RSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL 110 L LD + Y+ A+ + S +A Q W R+ C + D R C + Y+ R+++L Sbjct 65 LAQLDRLMEQIYKAAVVNIPASEQPKATQRGWIKGRNDCWKAQDVRECTLQNYKGRIIEL 124 Query 111 AIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWK----GDQVIVFVEL-SGS 165 I PP + + C +TA FY Q DP TAV + G+Q + + SGS Sbjct 125 QIQGGLLEVPPAVVFDC-GHHPQITAVFYTQLDPVTAVFTFSSEKMGEQQLQATNVRSGS 183 Query 166 GARYGRQGIEYWEHQGEVRLDFHGATFVCR 195 GA+Y + E+WEHQGE + F ++ C+ Sbjct 184 GAKYQGRNFEFWEHQGEASVQFFDDSYRCK 213 >gi|146291219|ref|YP_001181643.1| hypothetical protein Sputcn32_0108 [Shewanella putrefaciens CN-32] gi|145562909|gb|ABP73844.1| conserved hypothetical protein [Shewanella putrefaciens CN-32] gi|319428422|gb|ADV56496.1| Protein of unknown function DUF2091, periplasmic [Shewanella putrefaciens 200] Length=212 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/187 (36%), Positives = 96/187 (52%), Gaps = 18/187 (9%) Query 5 GVLVTALVLSACAANPPANTTSPTAGQSLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAY 63 GV+V AL A AAN P S DCTK A ++ +VC D L LD++L+ Y Sbjct 22 GVVVGALSAGAMAANAP----------SFDCTKVNAGSIEDMVCKDAGLNQLDNQLAKVY 71 Query 64 QQALAHRRSA---ALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL-AIADPATAT 119 QAL ++ L+A Q W R+ C ++ D C+Q +YQTR+ +L A T Sbjct 72 SQALEKSKNEQPPTLKAMQRGWVKGRNECWKNDDKHACIQSSYQTRIAELQAQYRLVEMT 131 Query 120 PPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQV-IVFVELSGSGARYGRQGIEYWE 178 PV +Y C Y + +P T + +GDQ ++FV+ SGSGA+Y + WE Sbjct 132 GPV-SYACDGSPANELVVTYFKTEPATLIAE-RGDQTSLMFVQPSGSGAKYQGRNESLWE 189 Query 179 HQGEVRL 185 HQGE ++ Sbjct 190 HQGEAKV 196 >gi|120600746|ref|YP_965320.1| hypothetical protein Sputw3181_3962 [Shewanella sp. W3-18-1] gi|120560839|gb|ABM26766.1| conserved hypothetical protein [Shewanella sp. W3-18-1] Length=212 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/187 (36%), Positives = 95/187 (51%), Gaps = 18/187 (9%) Query 5 GVLVTALVLSACAANPPANTTSPTAGQSLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAY 63 GV+V+AL A AAN P S DC K A ++ +VC D L LD++L+ Y Sbjct 22 GVMVSALSAGAMAANEP----------SFDCAKVNAGSIEDMVCKDAGLNQLDNQLAKVY 71 Query 64 QQALAHRRSA---ALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL-AIADPATAT 119 QAL ++ L+A Q W R+ C + D C+Q +YQTR+ +L A T Sbjct 72 SQALEKAKNEQPPTLKAMQRGWVKGRNECWKSDDKHACIQSSYQTRIAELQAQYRLVEMT 131 Query 120 PPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQV-IVFVELSGSGARYGRQGIEYWE 178 PV +Y C Y + +P T + +GDQ ++FV+ SGSGA+Y + WE Sbjct 132 GPV-SYACDGSPANELVVTYFKTEPATLIAE-RGDQTSLMFVQPSGSGAKYQGRNESLWE 189 Query 179 HQGEVRL 185 HQGE ++ Sbjct 190 HQGEAKV 196 >gi|24371712|ref|NP_715754.1| hypothetical protein SO_0112 [Shewanella oneidensis MR-1] gi|24345489|gb|AAN53199.1|AE015462_6 conserved hypothetical protein [Shewanella oneidensis MR-1] Length=207 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/187 (36%), Positives = 92/187 (50%), Gaps = 18/187 (9%) Query 5 GVLVTALVLSACAANPPANTTSPTAGQSLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAY 63 GVL TAL L A AA P S DC K A ++++VC D L LD +L+ Y Sbjct 16 GVLATALCLPAIAAESP----------SFDCGKVQAGSIEEMVCRDAGLIKLDRQLADVY 65 Query 64 QQALAHRRSA---ALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL-AIADPATAT 119 +A ++ L+A Q W R+ C + D RTCV+ +YQTR+ QL A T Sbjct 66 AKATEKAKNEQPPVLKAMQRGWVKGRNECWKSEDKRTCVESSYQTRIAQLQAQYRLVEMT 125 Query 120 PPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQV-IVFVELSGSGARYGRQGIEYWE 178 PV Y C Y + +P T + +GDQ ++F++ S SGA+Y Q WE Sbjct 126 GPVF-YTCDGNPANEVVVSYFKTEPATLIAE-RGDQTSLMFIQRSASGAKYQGQNESLWE 183 Query 179 HQGEVRL 185 H GE R+ Sbjct 184 HHGEARI 190 >gi|70730382|ref|YP_260123.1| hypothetical protein PFL_3017 [Pseudomonas fluorescens Pf-5] gi|68344681|gb|AAY92287.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length=199 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/195 (33%), Positives = 107/195 (55%), Gaps = 12/195 (6%) Query 7 LVTALVLSACAANPPANTTSPTAGQSLDCTKPAT-IVQQLVCHDRQLTSLDHRLSTAYQQ 65 +V+++ LSA A A + G S +C++ T + L+C + L +LD +L+T Y+ Sbjct 8 MVSSVALSALLATSLA---TAEQGPSFNCSEKMTGSITALICQNPGLAALDRKLATIYRD 64 Query 66 AL--AHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAI-ADPATATPPV 122 AL A +R L+A Q W RD C + D + CV ++Y+ R+V+L T++ PV Sbjct 65 ALKNAGKRGNVLKAEQRGWIKGRDECWKIDDQQACVADSYRRRIVELQTDYGLVTSSAPV 124 Query 123 LTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQGE 182 + + C + +G ++ F+ Q +P + +KG Q ++ S SG+RY Q +WEHQGE Sbjct 125 M-FDCAS-NGRISVTFF-QTEPPSLTALYKGRQSLMLEASSASGSRYLGQNESFWEHQGE 181 Query 183 VRLDF-HGA-TFVCR 195 + + HGA +C+ Sbjct 182 AAVTWGHGAEEMICK 196 >gi|34495837|ref|NP_900052.1| hypothetical protein CV_0382 [Chromobacterium violaceum ATCC 12472] gi|34101692|gb|AAQ58060.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length=224 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/167 (37%), Positives = 82/167 (50%), Gaps = 8/167 (4%) Query 35 CTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAH---RRSAA---LEAAQSSWTMLRDA 88 C +PA +V+ +VC D LT LD+RL Y QAL+ RS A L A Q W Sbjct 53 CDQPANMVESMVCQDDGLTRLDNRLEKVYSQALSQAEQSRSGAQAKLIAEQKRWVKSLKD 112 Query 89 CAQDTDPRTCVQEAYQTRLVQL-AIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTA 147 C +D DP C+ + Y R+ QL A + A + P L Y C G + + P TA Sbjct 113 CLKDEDPHMCLGDTYILRVTQLQATWNLAQSLTP-LRYLCRGPAGATILATFYRTHPATA 171 Query 148 VLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQGEVRLDFHGATFVC 194 L VIV LSGSGARY QG+E+W + +++ G + C Sbjct 172 KLERGNALVIVHQGLSGSGARYQGQGVEFWIKGRDASVNWRGESLEC 218 >gi|152998664|ref|YP_001364345.1| hypothetical protein Shew185_0111 [Shewanella baltica OS185] gi|151363282|gb|ABS06282.1| conserved hypothetical protein [Shewanella baltica OS185] Length=212 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/197 (32%), Positives = 93/197 (48%), Gaps = 18/197 (9%) Query 6 VLVTALVLSACAANPPANTTSPTAGQSLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAYQ 64 V+V++L A AA+ P S DCTK A ++ +VC D L+ LD+ L+ Y Sbjct 23 VMVSSLSTGAMAADVP----------SFDCTKVDAGSIEAMVCKDAGLSQLDNNLAEVYS 72 Query 65 QALAHRRSA---ALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL-AIADPATATP 120 QAL ++ L+A Q W R+ C + D C++ +YQTR+ +L A T Sbjct 73 QALEKAKNEQPPTLKAMQRGWVKGRNECWKSDDKHACIEASYQTRIAELQAQYRLVDMTG 132 Query 121 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ 180 PV Y C Y + +P T + ++FV+ SGSGA+Y + WEHQ Sbjct 133 PVF-YACNGNPANEVVVTYFKTEPATLIAEHGDSTSLMFVQPSGSGAKYQGRNESLWEHQ 191 Query 181 GEVRL--DFHGATFVCR 195 GE ++ F C+ Sbjct 192 GEAKVVWGFEAPEMTCK 208 >gi|160873242|ref|YP_001552558.1| hypothetical protein Sbal195_0116 [Shewanella baltica OS195] gi|160858764|gb|ABX47298.1| conserved hypothetical protein [Shewanella baltica OS195] gi|315265467|gb|ADT92320.1| Protein of unknown function DUF2091, periplasmic [Shewanella baltica OS678] Length=212 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 61/197 (31%), Positives = 92/197 (47%), Gaps = 18/197 (9%) Query 6 VLVTALVLSACAANPPANTTSPTAGQSLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAYQ 64 V+V++L A AA+ P S DCTK ++ +VC D L+ LD+ L+ Y Sbjct 23 VMVSSLSTGAMAADVP----------SFDCTKVDVGSIEAMVCKDAGLSQLDNNLAEVYS 72 Query 65 QALAHRRSA---ALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL-AIADPATATP 120 QAL ++ L+A Q W R+ C + D C++ +YQTR+ +L A T Sbjct 73 QALEKAKNEQPPTLKAMQRGWVKGRNECWKSDDKHACIEASYQTRIAELQAQYRLVDMTG 132 Query 121 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ 180 PV Y C Y + +P T + ++FV+ SGSGA+Y + WEHQ Sbjct 133 PVF-YACDGNPANEVVVTYFKTEPATLIAEHGDSTSLMFVQPSGSGAKYQGRNESLWEHQ 191 Query 181 GEVRL--DFHGATFVCR 195 GE ++ F C+ Sbjct 192 GEAKVVWGFEAPEMTCK 208 >gi|114045621|ref|YP_736171.1| hypothetical protein Shewmr7_0108 [Shewanella sp. MR-7] gi|113887063|gb|ABI41114.1| conserved hypothetical protein [Shewanella sp. MR-7] Length=206 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/187 (34%), Positives = 89/187 (48%), Gaps = 18/187 (9%) Query 5 GVLVTALVLSACAANPPANTTSPTAGQSLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAY 63 G+ L A AA P S DC+K A +++LVC D L LD +L+ Y Sbjct 16 GIFAMTLGTPAMAAEKP----------SFDCSKVRAGSIEELVCQDEGLIKLDQQLAEVY 65 Query 64 QQALAHRRSA---ALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL-AIADPATAT 119 +A ++ L+A Q W RD C + D R CV+ YQTR+ +L A T Sbjct 66 TKATEKAKNEQPPTLKAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYRLVEMT 125 Query 120 PPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQV-IVFVELSGSGARYGRQGIEYWE 178 PV Y C Y + +P T + + +GDQ ++FV+ SGSGA+Y + WE Sbjct 126 GPVF-YACDGNPANEVVVSYFKTEPATLIAD-RGDQTSLMFVQPSGSGAKYQGRNESLWE 183 Query 179 HQGEVRL 185 H GE ++ Sbjct 184 HHGEAKI 190 >gi|217971328|ref|YP_002356079.1| hypothetical protein Sbal223_0115 [Shewanella baltica OS223] gi|217496463|gb|ACK44656.1| protein of unknown function DUF1311 [Shewanella baltica OS223] Length=212 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/185 (32%), Positives = 91/185 (50%), Gaps = 16/185 (8%) Query 6 VLVTALVLSACAANPPANTTSPTAGQSLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAYQ 64 V+V++L A AA+ P S DC K A ++ +VC D L+ LD++L+ Y Sbjct 23 VMVSSLSTGAMAADAP----------SFDCAKVNAGSIEAMVCKDAGLSQLDNQLAEVYS 72 Query 65 QALAHRRSA---ALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL-AIADPATATP 120 QAL ++ L+A Q W R+ C + D C++ +YQTR+ +L A T Sbjct 73 QALEKAKNEQPPTLKAMQRGWVKGRNECWKSDDKHACIEASYQTRIAELQAQYRLVDITG 132 Query 121 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQ 180 PV +Y C Y + +P T + ++FV+ SGSGA+Y + WEHQ Sbjct 133 PV-SYACDGNPANEVVVTYFKTEPATLIAEHGDSTSLMFVQPSGSGAKYQGRNESLWEHQ 191 Query 181 GEVRL 185 GE ++ Sbjct 192 GEAKV 196 >gi|117918571|ref|YP_867763.1| hypothetical protein Shewana3_0113 [Shewanella sp. ANA-3] gi|117610903|gb|ABK46357.1| conserved hypothetical protein [Shewanella sp. ANA-3] Length=206 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 82/160 (52%), Gaps = 8/160 (5%) Query 32 SLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAYQQALAHRRSA---ALEAAQSSWTMLRD 87 S DC K A +++LVC D LT LD +L+ Y QA ++ L+A Q W R+ Sbjct 33 SFDCGKVQAGSIEELVCQDAGLTKLDQQLAEVYAQAADKAKNEQPPMLKAMQRGWVKGRN 92 Query 88 ACAQDTDPRTCVQEAYQTRLVQL-AIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKT 146 C + D R CV+ +YQTR+ +L A T P+ Y C Y + +P T Sbjct 93 ECWKSEDKRACVESSYQTRIAELQAQYRLVEMTGPIF-YVCDGNPANEVVVSYFKTEPAT 151 Query 147 AVLNWKGDQV-IVFVELSGSGARYGRQGIEYWEHQGEVRL 185 + +GDQ ++FV+ SGSGA+Y + WEH GE ++ Sbjct 152 LIAE-RGDQTSLMFVQPSGSGAKYQGRNESLWEHHGEAKI 190 >gi|145300412|ref|YP_001143253.1| hypothetical protein ASA_3537 [Aeromonas salmonicida subsp. salmonicida A449] gi|142853184|gb|ABO91505.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length=198 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/193 (34%), Positives = 93/193 (49%), Gaps = 20/193 (10%) Query 4 IGVLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAY 63 +G L+ A +L ACAA P S DC K + + L+C D L +LD+ L+T Y Sbjct 6 LGPLLFAPLL-ACAATP-----------SFDCAKASGAAETLICKDAALAALDNELATLY 53 Query 64 QQALAHRRSAAL---EAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATP 120 +ALA+ L +A Q W R+ C + D R CV+E YQ R+ +L I Sbjct 54 PKALANLSPEQLKTEKAMQRGWIKGRNDCWKAKDLRQCVEENYQQRITELQIKGGQLMVT 113 Query 121 PVLTYRCPTQDGPLTAQFYNQFDPKTAVLNW-KGD---QVIVFVELSGSGARYGRQGIEY 176 + Y+C + L+ FYN AV+N +GD QV+ + S SGARY Q + Sbjct 114 TPVDYQCGNKV-TLSTYFYNDAKLPAAVINLSEGDSQQQVLAYEVPSASGARYEGQNLSL 172 Query 177 WEHQGEVRLDFHG 189 + E L+ +G Sbjct 173 FTKGDEASLERYG 185 >gi|330828395|ref|YP_004391347.1| hypothetical protein B565_0695 [Aeromonas veronii B565] gi|328803531|gb|AEB48730.1| hypothetical protein B565_0695 [Aeromonas veronii B565] Length=198 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 55/171 (33%), Positives = 86/171 (51%), Gaps = 9/171 (5%) Query 32 SLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAHRRSAALE---AAQSSWTMLRDA 88 S DCTK + V+ L+C D L +LD+ L+ Y +A+A L+ A Q W R+ Sbjct 22 SFDCTKASGSVETLICKDAGLAALDNELAALYPKAIAALSPEQLKTERAMQRGWIKGRND 81 Query 89 CAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAV 148 C + D R CV++ Y R+ +L I+ P + Y+C ++ L+ FYN AV Sbjct 82 CWKGQDLRQCVEDNYLLRITELQISGGQLMVPAPVNYKC-GKNVMLSTYFYNDAKLPAAV 140 Query 149 LNW-KGD---QVIVFVELSGSGARYGRQGIEYWEHQGEVRLDFHG-ATFVC 194 +N +GD QV+ + S SGARY Q + ++ + L+ +G T C Sbjct 141 INLSEGDKQQQVLAYEAPSASGARYEGQNLTFFTKGDDATLERYGQPTLTC 191 >gi|127514274|ref|YP_001095471.1| hypothetical protein Shew_3346 [Shewanella loihica PV-4] gi|126639569|gb|ABO25212.1| conserved hypothetical protein [Shewanella loihica PV-4] Length=227 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/185 (30%), Positives = 89/185 (49%), Gaps = 8/185 (4%) Query 17 AANPPANTTSPTAGQSLDC-TKPATIVQQLVCHDRQLTSLDHRLSTAYQQALA---HRRS 72 A N P N T+ S DC + + ++ LVC D +L +LD +L+ YQ A A + + Sbjct 42 APNKPENHTANQP--SFDCGSDKLSSIEVLVCQDSELAALDRQLAEVYQAASAKAVNEQP 99 Query 73 AALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDG 132 L+A Q W RD C + D +C + YQ R+ +L A ++Y+C Sbjct 100 PLLKAEQRGWIKGRDECWKSDDKHSCAFDNYQMRIAELQARYRLIAPSAEVSYQCDGIAA 159 Query 133 PLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQGEVRLDF-HGAT 191 Y +P T + + +++ + SGSG+RY + WEHQGE R+ + +GA Sbjct 160 KEVVVSYFATEPATLIAEFGDSVSLMYSQPSGSGSRYQGRNESLWEHQGEARITWGYGAE 219 Query 192 -FVCR 195 +C+ Sbjct 220 PMICK 224 >gi|334705755|ref|ZP_08521621.1| hypothetical protein AcavA_17188 [Aeromonas caviae Ae398] Length=197 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 51/165 (31%), Positives = 81/165 (50%), Gaps = 8/165 (4%) Query 32 SLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAH---RRSAALEAAQSSWTMLRDA 88 S +C K + L+C D L +LD+ LS Y +A+A + + A Q W R+ Sbjct 22 SFECAKAKGAAETLICKDAGLAALDNELSALYPKAIAGFSPEQQKSERAIQRGWIKGRND 81 Query 89 CAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAV 148 C + D R CV+E+YQ R+ +L I P + Y+C + L+ FYN+ A+ Sbjct 82 CWKAGDLRQCVEESYQLRITELQIKGGQLKVPTPVDYQC-GKSVTLSTYFYNEAKRPAAM 140 Query 149 LNW-KGD---QVIVFVELSGSGARYGRQGIEYWEHQGEVRLDFHG 189 +N +G+ QV+ + S SGARY Q + W + L+ +G Sbjct 141 INLSEGNNQQQVLAYETPSASGARYEGQNLTLWTKGSDAMLERYG 185 >gi|39995863|ref|NP_951814.1| lipoprotein [Geobacter sulfurreducens PCA] gi|39982627|gb|AAR34087.1| lipoprotein, putative [Geobacter sulfurreducens PCA] gi|298504874|gb|ADI83597.1| lipoprotein, putative [Geobacter sulfurreducens KN400] Length=280 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/171 (33%), Positives = 83/171 (49%), Gaps = 9/171 (5%) Query 21 PANTTSPTAGQSLDC--TKPATIVQQLVCHDRQLTSLDHRLSTAYQQALA---HRRSAAL 75 PA T+P G S DC P +I + LVC DR+L++LD +L+ Y A A + L Sbjct 98 PAGATAPE-GPSYDCDTVTPGSI-EALVCGDRELSALDRKLADVYAAASARAVNEHPPRL 155 Query 76 EAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGPLT 135 A Q W R+ C + R CV++ Y R +L + + C Sbjct 156 GAEQRGWIKGRNDCWKSDTVRECVRDEYLRRTAELQATYRLVPGIGPVRFVCDGNPANEV 215 Query 136 AQFYNQFDPKTAVLNWKGDQV-IVFVELSGSGARYGRQGIEYWEHQGEVRL 185 + Q +P T + +GD+V ++FV+ SGSGA+Y + +WEHQGE + Sbjct 216 VATFFQTEPATLIAE-RGDEVSLMFVQPSGSGAKYQGRNETFWEHQGEASI 265 >gi|118588851|ref|ZP_01546259.1| hypothetical protein SIAM614_19134 [Stappia aggregata IAM 12614] gi|118438837|gb|EAV45470.1| hypothetical protein SIAM614_19134 [Stappia aggregata IAM 12614] Length=204 Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/182 (31%), Positives = 88/182 (49%), Gaps = 19/182 (10%) Query 29 AGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQAL---------AHRRSAALEAAQ 79 AG + DC K + ++LVC + L +LD +L+ Y+ A+ A L+A Q Sbjct 24 AGPAFDCAKAESSAEKLVCSNDDLGALDQKLADVYEGAVGVVKSLDAGAEEELNTLKAYQ 83 Query 80 SSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGP---LTA 136 W RD C + D +CV+ AY+ R+ +L + Y C D P + A Sbjct 84 RGWVKGRDDCWKSDDELSCVRSAYERRIAELTARYQLIKGQAPVFYTC--NDNPADEIVA 141 Query 137 QFYNQFDPKTAVLNWKGDQVIVFVEL-SGSGARY-GRQGIEYWEHQGEVRLDF-HGATFV 193 F++ +P +A L +GD + V+ SGSGARY G GI +W E +++ G +F Sbjct 142 TFFDT-EPPSARLE-RGDTTEIVVQGPSGSGARYEGDFGILFWSKGDEAMVEWPQGTSFD 199 Query 194 CR 195 C+ Sbjct 200 CK 201 >gi|119773641|ref|YP_926381.1| hypothetical protein Sama_0501 [Shewanella amazonensis SB2B] gi|119766141|gb|ABL98711.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length=196 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/172 (31%), Positives = 80/172 (47%), Gaps = 12/172 (6%) Query 32 SLDCTK---PATIVQQLVCHDRQLTSLDHRLSTAYQQALAHRRSAA---LEAAQSSWTML 85 S DC K A ++LVC D +L +LD +L+ YQ +A +A Q W Sbjct 24 SFDCGKLPGNAPSAEKLVCTDLELAALDRQLNEVYQTIVARAGDGLPPLFKAEQRGWIKG 83 Query 86 RDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPK 145 R+ C + D CV ++Y++R +L A ++RC + + F +P Sbjct 84 RNECWKSEDLAACVAKSYRSRTAELQARYRLVAMKGPFSWRCDDNSEVIISYF--DTEPA 141 Query 146 TAVLNWKGDQV-IVFVELSGSGARYGRQGIEYWEHQGEVRL--DFHGATFVC 194 TA+ +GD V +++V SGSGARY +WEHQGE + F C Sbjct 142 TAIAE-RGDSVSLMYVAPSGSGARYQGPSESFWEHQGEAEVIWGFEAPVLKC 192 >gi|148547968|ref|YP_001268070.1| hypothetical protein Pput_2752 [Pseudomonas putida F1] gi|148512026|gb|ABQ78886.1| Uncharacterized protein putative lipoprotein [Pseudomonas putida F1] Length=193 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/172 (28%), Positives = 83/172 (49%), Gaps = 8/172 (4%) Query 30 GQSLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAY---QQALAHRRSAALEAAQSSWTML 85 G + +CT+ A ++Q +C +L+++D +++ Y QQ A+ L+ Q W Sbjct 20 GPAFNCTQVEAGSIEQQICQSERLSAMDRKMAEVYTAAQQKAANEHPPVLKTEQRGWVKG 79 Query 86 RDACAQDTDPRTCVQEAYQTRLVQL-AIADPATATPPVLTYRCPTQDGPLTAQFYNQFDP 144 R+ C + D C+ ++Y+ R+ +L A AT PV Y+C + + +P Sbjct 80 RNDCWKSADQPACIADSYRLRIAELQARYRLVEATGPVF-YQCDGNPAKEVVARFFRTEP 138 Query 145 KTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQGE--VRLDFHGATFVC 194 TA++ + ++++E + SGARY Q WEH GE V + G C Sbjct 139 PTAIVEFGDRSSLMYLEQTASGARYQGQNESLWEHDGEAIVVWSYQGPEMHC 190 >gi|338973912|ref|ZP_08629274.1| putative lipoprotein [Bradyrhizobiaceae bacterium SG-6C] gi|338232639|gb|EGP07767.1| putative lipoprotein [Bradyrhizobiaceae bacterium SG-6C] Length=201 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/185 (30%), Positives = 84/185 (46%), Gaps = 16/185 (8%) Query 4 IGVLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAY 63 + + T ++L+A +A+ A + DC+K + V+QL+C+D L LD L+TA+ Sbjct 10 VSAVATWMLLTASSAD--------CAQPAFDCSKASHEVEQLICNDDALAKLDVTLATAF 61 Query 64 ---QQALAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATP 120 Q+ + ++ + L+A Q W RD C + TD CV AY R+V L Sbjct 62 TDSQKNIDAQQLSELKATQRGWIKGRDDCWKATDKLQCVTSAYSDRIVTLQARYGLVMAG 121 Query 121 PVLTYRCPTQDGPLTAQFYNQF--DPKTAVLNWKGDQVIVFVELSGSGARY-GRQGIEYW 177 + + C D + + F DP A L + V SGSG RY G GI +W Sbjct 122 KSVYFDC--SDAAKSEIIFTPFATDPPAASLVRGDESTTVIQRPSGSGVRYEGEFGISFW 179 Query 178 EHQGE 182 E Sbjct 180 NKGRE 184 >gi|329847586|ref|ZP_08262614.1| hypothetical protein ABI_06520 [Asticcacaulis biprosthecum C19] gi|328842649|gb|EGF92218.1| hypothetical protein ABI_06520 [Asticcacaulis biprosthecum C19] Length=233 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 78/180 (44%), Gaps = 18/180 (10%) Query 20 PPANTTSPTAGQ---SLDCTKP----ATIVQQLVCHDRQLTSLDHRLSTAY--QQALAHR 70 P ++SP S DC K +++++C D QL LD+ L+ Y A A Sbjct 40 PMPASSSPAGAMGTPSFDCAKALQDDPDGIERVICGDTQLVDLDNELARLYFLADASAGA 99 Query 71 RSAALEAAQSSW-TMLRDACAQDTDPRTCVQEAYQTRLVQLAIA------DPATATPPVL 123 L+ Q W R C + + + C+ AY R+ L A D T+ P Sbjct 100 SRETLQRLQKGWLDQRRSTCTRTAEIKQCLVNAYAERIHDLRSAYAATRDDTGTSHGPD- 158 Query 124 TYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQGEV 183 ++RCP D PL+ F N + P A + W G VI+ +SGSG RY E W E+ Sbjct 159 SWRCPGSDLPLSTTFINGY-PSIAYIRWGGQSVILPQVISGSGGRYAGDSYELWTKGSEL 217 >gi|226944379|ref|YP_002799452.1| lipoprotein [Azotobacter vinelandii DJ] gi|226719306|gb|ACO78477.1| lipoprotein [Azotobacter vinelandii DJ] Length=221 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/146 (27%), Positives = 66/146 (46%), Gaps = 4/146 (2%) Query 42 VQQLVCHDRQLTSLDHRLSTAYQQAL---AHRRSAALEAAQSSWTMLRDACAQDTDPRTC 98 +++ +C D+ LT+LD +++ Y A + A LE Q W RDAC + +P C Sbjct 45 LEKTICTDQDLTALDRKMAEVYAAARNGDSAGNPAGLEEQQRDWIESRDACEKSAEPPEC 104 Query 99 VQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIV 158 +QE+Y+ R+ +L TY C + + + DP + + ++ Sbjct 105 LQESYRRRIAELQARHALVPLSGTFTYTCDDDRNKIVHARFYETDPLSLYAEYDEQDSVM 164 Query 159 FVELSGSGARY-GRQGIEYWEHQGEV 183 V+ S +G +Y G+ WEH E Sbjct 165 IVQPSSTGVKYAGQNETTLWEHGDEA 190 >gi|330446354|ref|ZP_08310006.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490545|dbj|GAA04503.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length=403 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/95 (35%), Positives = 55/95 (58%), Gaps = 4/95 (4%) Query 34 DCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAH---RRSAALEAAQSSWTMLRDACA 90 DC P++ + +L+CHD +L L+ +LS YQQAL + ++ Q +W R C Sbjct 28 DCHSPSSELDKLICHDAELVVLNKQLSGVYQQALTQSMVSEADVMKETQKNWLATRHLCL 87 Query 91 QDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTY 125 + +DP+ C+ ++Y++RL L + AT PP+ TY Sbjct 88 KHSDPQRCLVDSYRSRLQSLKEIN-ATVLPPLATY 121 >gi|110678670|ref|YP_681677.1| hypothetical protein RD1_1349 [Roseobacter denitrificans OCh 114] gi|109454786|gb|ABG30991.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length=212 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 56/181 (31%), Positives = 77/181 (43%), Gaps = 18/181 (9%) Query 11 LVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQAL--- 67 L+ C + T G S DC K ++ + L+C D L +LD RL+ + AL Sbjct 13 LIAGMCFTLAATGVNAETTGPSFDCAKASSQAEDLICADAALATLDRRLALRFGAALEAA 72 Query 68 ------AHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPP 121 L A Q W RD C + D R CV+ Y TR QL A Sbjct 73 GNIEDDTENARTTLRAMQRGWIKGRDECWKAQDVRGCVERDYLTREGQLVAAWMLETPLA 132 Query 122 VLTYRCPTQDGP---LTAQFYNQFDPKTAVLNWKGDQVIV-FVELSGSGARYGRQ-GIEY 176 +TY C +D P +TA F++ P V GD V V +E + SG+RY + G + Sbjct 133 TVTYTC--EDNPANEVTAYFFDTELPSIRVE--YGDSVAVGSLEPAASGSRYAIEFGGIF 188 Query 177 W 177 W Sbjct 189 W 189 >gi|260429484|ref|ZP_05783461.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260420107|gb|EEX13360.1| conserved hypothetical protein [Citreicella sp. SE45] Length=211 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/176 (30%), Positives = 76/176 (44%), Gaps = 25/176 (14%) Query 6 VLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQ 65 + V AL+ A A PP DCT+ + ++ VC D L S+D LS +Q+ Sbjct 12 ISVIALMSPALALEPP-----------FDCTRAESDAEKAVCSDDTLASMDLELSRLFQR 60 Query 66 A-----LAHRRSAALEAAQSSWTMLRDAC-AQDTDPRTCVQEAYQTRLVQL------AIA 113 A + R L+A Q W RDAC D C Y R+ ++ A A Sbjct 61 AAEGPNMDPERHRMLQAEQRGWIKGRDACWKSDLGIPFCTASEYAFRIAEIRQGYADARA 120 Query 114 DPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARY 169 + + P Y C D P++A F N P VL W + +++ +GSGA+Y Sbjct 121 ENGASLGP-YAYVCEGMDVPVSAVFVNTLAPMV-VLRWGENAIVLPSVETGSGAKY 174 >gi|126728412|ref|ZP_01744228.1| hypothetical protein SSE37_20517 [Sagittula stellata E-37] gi|126711377|gb|EBA10427.1| hypothetical protein SSE37_20517 [Sagittula stellata E-37] Length=211 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/168 (28%), Positives = 73/168 (44%), Gaps = 17/168 (10%) Query 26 SPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQA-----LAHRRSAALEAAQS 80 +P A + DC K + V++++C + L LD ++ Y A L R L+A Q Sbjct 21 APAADPAFDCGKASGTVEEMICANDGLAELDREMARLYGLAVNDPDLGQERLDRLKAMQR 80 Query 81 SWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIA-------DPATATPPVLTYRCPTQDGP 133 W R+ C + CV E Y R+ +L + D A T L + C Sbjct 81 GWIKGRNDCWKADSVEGCVAENYAMRMHELRLGYGNTRSDDEAGITIGPLAFVCGGLKAG 140 Query 134 LTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQ---GI-EYW 177 ++A F N + + L W + + +SGSGARY + GI E+W Sbjct 141 ISAVFVNGAEGLVS-LRWDDRSLALTQAVSGSGARYEGESFDGIYEFW 187 >gi|88800326|ref|ZP_01115892.1| hypothetical protein MED297_00450 [Reinekea sp. MED297] gi|88776903|gb|EAR08112.1| hypothetical protein MED297_00450 [Reinekea sp. MED297] Length=322 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/96 (32%), Positives = 53/96 (56%), Gaps = 4/96 (4%) Query 32 SLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALA---HRRSAALEAAQSSWTMLRD- 87 S DC T +++ +C +L+ LD RL+ +YQQA + + ++ AQ +W RD Sbjct 30 SFDCENAVTSIEKEICRSSELSELDERLAKSYQQARSVSTEDEALSIREAQIAWINDRDE 89 Query 88 ACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVL 123 C++ ++ C+ E Y+ RL+ LA+ + TP +L Sbjct 90 TCSEQSNLNECLIEQYKLRLIDLAVYNGGLTTPVLL 125 >gi|218887180|ref|YP_002436501.1| hypothetical protein DvMF_2090 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758134|gb|ACL09033.1| hypothetical protein DvMF_2090 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length=356 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/137 (38%), Positives = 63/137 (46%), Gaps = 21/137 (15%) Query 3 WIGVLVTALVLSACAANPPANTTSPTAGQSLDCTK-PATIVQQLVCHDRQLTSLDHRLST 61 W G LV LV A AA P +PT G S CT+ + + +VC D +L LD L+ Sbjct 96 WCG-LVDRLVRGAPAA-PRGGDAAPTEGPSFPCTEVRSGSAEAMVCDDAELAGLDRTLAD 153 Query 62 AYQQALAHRRSAA-----LEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPA 116 Y A A RSA L A Q W RD C + D RTCV++AY R+ +L Sbjct 154 VY--AAARARSANEHPPFLRAEQRGWARGRDECWKSADRRTCVRDAYVLRIAELQA---- 207 Query 117 TATPPVLTYRCPTQDGP 133 YR QDGP Sbjct 208 -------RYRLVAQDGP 217 >gi|189499720|ref|YP_001959190.1| hypothetical protein Cphamn1_0757 [Chlorobium phaeobacteroides BS1] gi|189495161|gb|ACE03709.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1] Length=208 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/181 (29%), Positives = 74/181 (41%), Gaps = 21/181 (11%) Query 6 VLVTALVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQ 65 V LV +A A TSP S DC+K + ++LVC D +L SLD ++ + Sbjct 4 VFTFLLVFMMFSATVQA--TSP----SFDCSKAQSSAEKLVCEDDELASLDLEVARLFDL 57 Query 66 A-----LAHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL--------AI 112 A + R L A Q W RD C + + R CV Y R+ +L Sbjct 58 ARDGKYMTPERRKLLIATQRGWVKGRDDCWKASSLRDCVFSNYVIRIHELRQGYADARGE 117 Query 113 ADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQ 172 D + P L C + + F P A + W +I+ LSGSG+RY + Sbjct 118 NDKGISKGP-LALTCENFNAGIAVTFIRINQP-VAYMEWGDKFIIMRSALSGSGSRYTAK 175 Query 173 G 173 G Sbjct 176 G 176 >gi|170698251|ref|ZP_02889328.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] gi|170136832|gb|EDT05083.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] Length=341 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/165 (35%), Positives = 75/165 (46%), Gaps = 24/165 (14%) Query 32 SLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAH-RRSAALEAAQSSWTMLRDACA 90 DCTK A+ ++ +C D L+SLD +L+TA+++ALA +AAL+AAQ W RD C Sbjct 31 GFDCTKAASPTEKAICADPGLSSLDGQLATAWKKALAKGGDTAALKAAQLQWLKQRDRCG 90 Query 91 QDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGPLTAQFYNQFDPKTAVLN 150 D CV + Y+ RL L A A YR D P +VL Sbjct 91 NDV---LCVGDRYRERLASLNGAPLAADRWQQTWYR--DSDNPSFG----------SVLT 135 Query 151 WKGDQVIVFVELSGS-GARYGRQGIEYWEH-------QGEVRLDF 187 + G + ELSGS GA G + H Q RLDF Sbjct 136 FTGTAPRLHFELSGSNGANTGGLSGDIELHGDRGTFRQDRCRLDF 180 >gi|113968458|ref|YP_732251.1| hypothetical protein Shewmr4_0113 [Shewanella sp. MR-4] gi|113883142|gb|ABI37194.1| conserved hypothetical protein [Shewanella sp. MR-4] Length=128 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/110 (34%), Positives = 52/110 (48%), Gaps = 14/110 (12%) Query 5 GVLVTALVLSACAANPPANTTSPTAGQSLDCTK-PATIVQQLVCHDRQLTSLDHRLSTAY 63 G+ L A AA P S DC+K A +++LVC D L LD +L+ Y Sbjct 16 GLFAMTLGTPAMAAEKP----------SFDCSKVRAGSIEELVCQDEGLIKLDQQLAEVY 65 Query 64 QQALAHRRSA---ALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQL 110 +A ++ L+A Q W RD C + D R CV+ YQTR+ +L Sbjct 66 TKATEKAKNEQPPTLKAMQRGWVKGRDECWKSEDKRACVESTYQTRIAEL 115 >gi|94312934|ref|YP_586143.1| putative lipoprotein [Cupriavidus metallidurans CH34] gi|93356786|gb|ABF10874.1| conserved hypothetical protein; putative lipoprotein [Cupriavidus metallidurans CH34] Length=211 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/187 (28%), Positives = 73/187 (40%), Gaps = 20/187 (10%) Query 29 AGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAHR-----RSAALEAAQSSWT 83 A S DC V+QL+C D L LD + Y AL R + L A Q W Sbjct 24 ASPSFDCGNAKGQVEQLICKDDTLARLDRETTRLYGMALDARSLPAPQKKTLLAEQRGWI 83 Query 84 MLRDACAQDTDPRTCVQEAYQTRLVQLAIA--------DPATATPPVLTYRCPTQDGPLT 135 R+ C + +D CV +Y R+ +L A D + P RCP + Sbjct 84 KGRNDCWKASDAGVCVAASYLERIHELRHAYAGARTQDDKGISRGP-FDIRCPDVKAVIA 142 Query 136 AQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARY----GRQGIEYWEHQGEVRLDFHG-A 190 F Q +P A L W Q+++ + SGARY +W+ + +L G A Sbjct 143 GTFV-QTEPGFAYLRWLDQQLVLTQTPAASGARYTATTANGEAVFWDKGPDAQLTLPGKA 201 Query 191 TFVCRTS 197 CR Sbjct 202 DMNCRVG 208 >gi|339504920|ref|YP_004692340.1| hypothetical protein RLO149_c034360 [Roseobacter litoralis Och 149] gi|338758913|gb|AEI95377.1| hypothetical protein DUF1311/DUF2091 [Roseobacter litoralis Och 149] Length=212 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/142 (30%), Positives = 57/142 (41%), Gaps = 14/142 (9%) Query 11 LVLSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQAL--- 67 L+ C ++ T G S DC K + + L+C+D L LD R++ Y AL Sbjct 13 LIAGTCLTLAATCVSAETTGPSFDCAKAGSQTEDLICNDTALAVLDRRMALRYAAALKAA 72 Query 68 ------AHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPP 121 L A Q W RD C + D R CV+ AY TR +L A Sbjct 73 GNIQGGTENALNTLRAMQRGWIKGRDDCWKADDLRNCVEAAYLTREGELVTAWMLETPLA 132 Query 122 VLTYRCPTQDGP---LTAQFYN 140 TY C D P +T F++ Sbjct 133 TATYIC--DDNPANEVTTYFFD 152 >gi|318041588|ref|ZP_07973544.1| hypothetical protein SCB01_07747 [Synechococcus sp. CB0101] Length=180 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/64 (40%), Positives = 38/64 (60%), Gaps = 0/64 (0%) Query 133 PLTAQFYNQFDPKTAVLNWKGDQVIVFVELSGSGARYGRQGIEYWEHQGEVRLDFHGATF 192 P++ + NQ +P+ A L V++ V SGSGARY G+E WEHQG ++++ G Sbjct 117 PVSVVYLNQAEPRRAALAVGDQHVLLPVAPSGSGARYSGSGVELWEHQGTTQINWRGQNL 176 Query 193 VCRT 196 VC + Sbjct 177 VCNS 180 >gi|84687965|ref|ZP_01015829.1| lipoprotein, putative [Maritimibacter alkaliphilus HTCC2654] gi|84663997|gb|EAQ10497.1| lipoprotein, putative [Rhodobacterales bacterium HTCC2654] Length=200 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/165 (30%), Positives = 69/165 (42%), Gaps = 16/165 (9%) Query 30 GQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAHRRS---------AALEAAQS 80 G + DC K + +C + +L +LD RL+ Y ALA A L+A Q Sbjct 21 GPTFDCAKATHEAEIAICENAELAALDRRLAETYGAALAMAEGLDAGAKTAVAELKAYQR 80 Query 81 SWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGP-LTAQFY 139 W RDAC +D+D C+ +AY R +L PV T GP + F+ Sbjct 81 GWIGGRDACWKDSDIVACISDAYLRREAELVAM--WMLEEPVGTSVWMCDGGPEVVTMFF 138 Query 140 NQFDPKTAVLNWKGDQV-IVFVELSGSGARY-GRQGIEYWEHQGE 182 + P + GD + + V + SGA+Y G G W E Sbjct 139 DTPLPSARIE--VGDSIDVATVTRTASGAKYEGSFGRSIWIKGNE 181 >gi|313145035|ref|ZP_07807228.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313130066|gb|EFR47683.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length=359 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/123 (31%), Positives = 60/123 (49%), Gaps = 12/123 (9%) Query 22 ANTTSPTAGQ-SLDCTKPATIVQQLVCHDR--QLTSLDHRLSTAYQQ---ALAHRRSAAL 75 N SP + S DC K T V++++C D +L +LD ++S +YQ L AL Sbjct 6 VNAQSPQEAKPSFDCAKATTKVEKMICEDSSGELQNLDRQISQSYQDTKAKLDKNAKKAL 65 Query 76 EAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVLTYRCPTQDGPLT 135 +Q SW R+ C + + C++E+ Q+R+ +L P T+ + TY Q+ T Sbjct 66 LDSQKSWLKTRERC----ESKECLKESLQSRIKELQSYTPHTSNAWLGTY--SLQENLYT 119 Query 136 AQF 138 F Sbjct 120 GSF 122 >gi|84501005|ref|ZP_00999240.1| hypothetical protein OB2597_02682 [Oceanicola batsensis HTCC2597] gi|84391072|gb|EAQ03490.1| hypothetical protein OB2597_02682 [Oceanicola batsensis HTCC2597] Length=202 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/90 (35%), Positives = 42/90 (47%), Gaps = 9/90 (10%) Query 30 GQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQALAHRRSA---------ALEAAQS 80 G + DC K + ++LVC D L +LD RL+ + AL+ R L A Q Sbjct 24 GPAFDCAKAESSAEKLVCDDPALAALDRRLADRFAAALSVTRGLDTGAKEVEDNLRATQR 83 Query 81 SWTMLRDACAQDTDPRTCVQEAYQTRLVQL 110 W RD C +D D R CV+ Y R +L Sbjct 84 GWIKGRDECWKDPDLRACVEAEYLRREAEL 113 >gi|114764434|ref|ZP_01443660.1| hypothetical protein 1100011001309_R2601_01873 [Pelagibaca bermudensis HTCC2601] gi|114543188|gb|EAU46206.1| hypothetical protein R2601_01873 [Roseovarius sp. HTCC2601] Length=199 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/160 (29%), Positives = 66/160 (42%), Gaps = 14/160 (8%) Query 13 LSACAANPPANTTSPTAGQSLDCTKPATIVQQLVCHDRQLTSLDHRLSTAYQQAL----- 67 L AC A P + G + DC K + ++L+C D L +LD RL+ + A+ Sbjct 8 LLACLALSPVAGLAQD-GPAFDCAKAESSAEKLICDDADLAALDRRLADRFAAAVEVAEG 66 Query 68 ----AHRRSAALEAAQSSWTMLRDACAQDTDPRTCVQEAYQTRLVQLAIADPATATPPVL 123 A + L A Q W RD C +++D R CV+ Y R +L PP Sbjct 67 LDVGAEETTDTLRAMQRGWISGRDECWKESDLRACVETEYLQREAELVA--EFMLEPPSE 124 Query 124 TYRCPTQDGPLTAQFYNQFDPKTAVLNWKGDQVIVFVELS 163 T+ LT + P V +GD V V +L+ Sbjct 125 TFELTCGPRALTVDVFATDLPGLRV--EEGDSVYVGAQLA 162 Lambda K H 0.320 0.130 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 208621361780 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40