BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1553
Length=247
Score E
Sequences producing significant alignments: (Bits) Value
gi|31792738|ref|NP_855231.1| fumarate reductase iron-sulfur subu... 514 3e-144
gi|121637474|ref|YP_977697.1| fumarate reductase frdC [Mycobacte... 514 4e-144
gi|15608691|ref|NP_216069.1| fumarate reductase iron-sulfur subu... 510 7e-143
gi|224989948|ref|YP_002644635.1| putative fumarate reductase [My... 510 9e-143
gi|148822776|ref|YP_001287530.1| fumarate reductase iron-sulfur ... 508 3e-142
gi|308377764|ref|ZP_07480325.2| putative 4Fe-4S binding domain p... 508 4e-142
gi|254364423|ref|ZP_04980469.1| fumarate reductase [iron-sulfur ... 508 4e-142
gi|308378969|ref|ZP_07668872.1| LOW QUALITY PROTEIN: fumarate re... 506 1e-141
gi|340626573|ref|YP_004745025.1| putative fumarate reductase [ir... 504 3e-141
gi|167968108|ref|ZP_02550385.1| putative fumarate reductase [iro... 498 2e-139
gi|333920625|ref|YP_004494206.1| putative fumarate reductase [Am... 393 2e-107
gi|254231780|ref|ZP_04925107.1| fumarate reductase [iron-sulfur ... 390 1e-106
gi|289443006|ref|ZP_06432750.1| fumarate reductase, iron-sulfur ... 353 1e-95
gi|319943871|ref|ZP_08018152.1| succinate dehydrogenase and fuma... 296 1e-78
gi|237809231|ref|YP_002893671.1| fumarate reductase iron-sulfur ... 293 1e-77
gi|330828650|ref|YP_004391602.1| fumarate reductase iron-sulfur ... 292 4e-77
gi|334704008|ref|ZP_08519874.1| fumarate reductase iron-sulfur s... 290 1e-76
gi|117620626|ref|YP_857700.1| fumarate reductase iron-sulfur sub... 290 2e-76
gi|145298133|ref|YP_001140974.1| fumarate reductase iron-sulfur ... 289 2e-76
gi|332527673|ref|ZP_08403718.1| fumarate reductase iron-sulfur s... 288 7e-76
gi|119946885|ref|YP_944565.1| fumarate reductase iron-sulfur sub... 282 3e-74
gi|257092550|ref|YP_003166191.1| fumarate reductase iron-sulfur ... 280 9e-74
gi|121998231|ref|YP_001003018.1| succinate dehydrogenase and fum... 278 6e-73
gi|34498823|ref|NP_903038.1| fumarate reductase iron-sulfur subu... 275 6e-72
gi|149909945|ref|ZP_01898594.1| succinate dehydrogenase [Moritel... 274 1e-71
gi|312115714|ref|YP_004013310.1| succinate dehydrogenase and fum... 273 2e-71
gi|240948012|ref|ZP_04752430.1| fumarate reductase iron-sulfur s... 272 3e-71
gi|46143535|ref|ZP_00135022.2| COG0479: Succinate dehydrogenase/... 272 3e-71
gi|322513265|ref|ZP_08066389.1| fumarate reductase subunit B [Ac... 272 4e-71
gi|307250804|ref|ZP_07532733.1| Fumarate reductase iron-sulfur s... 272 4e-71
gi|165976958|ref|YP_001652551.1| fumarate reductase iron-sulfur ... 272 4e-71
gi|33151305|ref|NP_872658.1| fumarate reductase iron-sulfur subu... 271 5e-71
gi|1074114|pir||G64097 fumarate reductase (EC 1.3.99.1) iron-sul... 271 9e-71
gi|242237922|ref|YP_002986103.1| fumarate reductase iron-sulfur ... 270 1e-70
gi|319775234|ref|YP_004137722.1| fumarate reductase iron-sulfur ... 270 1e-70
gi|16272775|ref|NP_438994.1| fumarate reductase iron-sulfur subu... 270 2e-70
gi|90407178|ref|ZP_01215366.1| succinate dehydrogenase [Psychrom... 270 2e-70
gi|341949444|gb|EGT76048.1| Fumarate reductase iron-sulfur subun... 270 2e-70
gi|238918353|ref|YP_002931867.1| fumarate reductase iron-sulfur ... 270 2e-70
gi|27364669|ref|NP_760197.1| fumarate reductase iron-sulfur subu... 270 2e-70
gi|269137695|ref|YP_003294395.1| fumarate reductase iron-sulfur ... 270 2e-70
gi|342864327|ref|ZP_08720919.1| fumarate reductase iron-sulfur p... 270 2e-70
gi|341956008|gb|EGT82451.1| Fumarate reductase iron-sulfur subun... 269 2e-70
gi|294634438|ref|ZP_06712974.1| fumarate reductase, iron-sulfur ... 269 2e-70
gi|149192248|ref|ZP_01870462.1| fumarate reductase iron-sulfur s... 269 3e-70
gi|261493894|ref|ZP_05990406.1| fumarate reductase iron-sulfur p... 269 3e-70
gi|145632193|ref|ZP_01787928.1| fumarate reductase iron-sulfur s... 269 3e-70
gi|271502188|ref|YP_003335214.1| succinate dehydrogenase and fum... 269 3e-70
gi|309973674|gb|ADO96875.1| Fumarate reductase, subunit B [Haemo... 268 4e-70
gi|254362604|ref|ZP_04978698.1| succinate dehydrogenase [Mannhei... 268 5e-70
>gi|31792738|ref|NP_855231.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit
FrdC [Mycobacterium bovis AF2122/97]
gi|31618328|emb|CAD96246.1| PROBABLE FUMARATE REDUCTASE [IRON-SULFUR SUBUNIT] FRDB and [MEMBRANE
ANCHOR SUBUNIT] FRDC (FUMARATE DEHYDROGENASE) (FUMARIC
HYDROGENASE) [Mycobacterium bovis AF2122/97]
Length=374
Score = 514 bits (1325), Expect = 3e-144, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI
Sbjct 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL
Sbjct 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY
Sbjct 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL
Sbjct 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
Query 241 LFPWGGG 247
LFPWGGG
Sbjct 241 LFPWGGG 247
>gi|121637474|ref|YP_977697.1| fumarate reductase frdC [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121493121|emb|CAL71592.1| Probable fumarate reductase [iron-sulfur subunit] frdB and [membrane
anchor subunit] frdC [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|341601492|emb|CCC64165.1| probable fumarate reductase [iron-sulfur subunit] frdB and [membrane
anchor subunit] frdC [Mycobacterium bovis BCG str. Moreau
RDJ]
Length=376
Score = 514 bits (1324), Expect = 4e-144, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI
Sbjct 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL
Sbjct 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY
Sbjct 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL
Sbjct 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
Query 241 LFPWGGG 247
LFPWGGG
Sbjct 241 LFPWGGG 247
>gi|15608691|ref|NP_216069.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis
H37Rv]
gi|15841020|ref|NP_336057.1| fumarate reductase, iron-sulfur protein [Mycobacterium tuberculosis
CDC1551]
gi|148661349|ref|YP_001282872.1| fumarate reductase iron-sulfur subunit FrdB [Mycobacterium tuberculosis
H37Ra]
41 more sequence titles
Length=247
Score = 510 bits (1314), Expect = 7e-143, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI
Sbjct 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL
Sbjct 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY
Sbjct 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL
Sbjct 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
Query 241 LFPWGGG 247
LFPWGGG
Sbjct 241 LFPWGGG 247
>gi|224989948|ref|YP_002644635.1| putative fumarate reductase [Mycobacterium bovis BCG str. Tokyo
172]
gi|224773061|dbj|BAH25867.1| putative fumarate reductase [Mycobacterium bovis BCG str. Tokyo
172]
Length=250
Score = 510 bits (1313), Expect = 9e-143, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI
Sbjct 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL
Sbjct 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY
Sbjct 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL
Sbjct 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
Query 241 LFPWGGG 247
LFPWGGG
Sbjct 241 LFPWGGG 247
>gi|148822776|ref|YP_001287530.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis
F11]
gi|289554656|ref|ZP_06443866.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis
KZN 605]
gi|297634122|ref|ZP_06951902.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit
FrdC [Mycobacterium tuberculosis KZN 4207]
gi|148721303|gb|ABR05928.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis
F11]
gi|289439288|gb|EFD21781.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis
KZN 605]
gi|328459143|gb|AEB04566.1| fumarate reductase iron-sulfur subunit frdB [Mycobacterium tuberculosis
KZN 4207]
gi|339294528|gb|AEJ46639.1| fumarate reductase frdC [Mycobacterium tuberculosis CCDC5079]
gi|339298164|gb|AEJ50274.1| fumarate reductase frdC [Mycobacterium tuberculosis CCDC5180]
Length=246
Score = 508 bits (1308), Expect = 3e-142, Method: Compositional matrix adjust.
Identities = 246/246 (100%), Positives = 246/246 (100%), Gaps = 0/246 (0%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC
Sbjct 1 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 60
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV
Sbjct 61 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 120
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN
Sbjct 121 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 180
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL
Sbjct 181 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 240
Query 242 FPWGGG 247
FPWGGG
Sbjct 241 FPWGGG 246
>gi|308377764|ref|ZP_07480325.2| putative 4Fe-4S binding domain protein [Mycobacterium tuberculosis
SUMu009]
gi|308354721|gb|EFP43572.1| putative 4Fe-4S binding domain protein [Mycobacterium tuberculosis
SUMu009]
Length=497
Score = 508 bits (1307), Expect = 4e-142, Method: Compositional matrix adjust.
Identities = 245/245 (100%), Positives = 245/245 (100%), Gaps = 0/245 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI
Sbjct 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL
Sbjct 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY
Sbjct 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL
Sbjct 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
Query 241 LFPWG 245
LFPWG
Sbjct 241 LFPWG 245
>gi|254364423|ref|ZP_04980469.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium
tuberculosis str. Haarlem]
gi|134149937|gb|EBA41982.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium
tuberculosis str. Haarlem]
Length=247
Score = 508 bits (1307), Expect = 4e-142, Method: Compositional matrix adjust.
Identities = 246/247 (99%), Positives = 246/247 (99%), Gaps = 0/247 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI
Sbjct 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL
Sbjct 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCY ACPVYALDPDFLGPAAIALGQRY
Sbjct 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYLACPVYALDPDFLGPAAIALGQRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL
Sbjct 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
Query 241 LFPWGGG 247
LFPWGGG
Sbjct 241 LFPWGGG 247
>gi|308378969|ref|ZP_07668872.1| LOW QUALITY PROTEIN: fumarate reductase iron-sulfur subunit frdB
[Mycobacterium tuberculosis SUMu010]
gi|308358705|gb|EFP47556.1| LOW QUALITY PROTEIN: fumarate reductase iron-sulfur subunit frdB
[Mycobacterium tuberculosis SUMu010]
Length=248
Score = 506 bits (1304), Expect = 1e-141, Method: Compositional matrix adjust.
Identities = 245/246 (99%), Positives = 245/246 (99%), Gaps = 0/246 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI
Sbjct 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL
Sbjct 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY
Sbjct 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL
Sbjct 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
Query 241 LFPWGG 246
LFPWG
Sbjct 241 LFPWGA 246
>gi|340626573|ref|YP_004745025.1| putative fumarate reductase [iron-sulfur subunit] FRDB [Mycobacterium
canettii CIPT 140010059]
gi|340004763|emb|CCC43907.1| putative fumarate reductase [iron-sulfur subunit] FRDB (fumarate
dehydrogenase) (fumaric hydrogenase) [Mycobacterium canettii
CIPT 140010059]
Length=247
Score = 504 bits (1299), Expect = 3e-141, Method: Compositional matrix adjust.
Identities = 245/247 (99%), Positives = 245/247 (99%), Gaps = 0/247 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI
Sbjct 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL
Sbjct 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY
Sbjct 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
NLDSRDQGAA RRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL
Sbjct 181 NLDSRDQGAAYRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
Query 241 LFPWGGG 247
LFPWG G
Sbjct 241 LFPWGNG 247
>gi|167968108|ref|ZP_02550385.1| putative fumarate reductase [iron-sulfur subunit] frdB and [Mycobacterium
tuberculosis H37Ra]
gi|254550573|ref|ZP_05141020.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit
FrdC [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|294996519|ref|ZP_06802210.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit
FrdC [Mycobacterium tuberculosis 210]
gi|297731109|ref|ZP_06960227.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit
FrdC [Mycobacterium tuberculosis KZN R506]
gi|313658441|ref|ZP_07815321.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit
FrdC [Mycobacterium tuberculosis KZN V2475]
Length=241
Score = 498 bits (1283), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 241/241 (100%), Positives = 241/241 (100%), Gaps = 0/241 (0%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM
Sbjct 1 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 60
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP
Sbjct 61 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 120
Query 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDSRD 186
PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDSRD
Sbjct 121 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDSRD 180
Query 187 QGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFPWGG 246
QGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFPWGG
Sbjct 181 QGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFPWGG 240
Query 247 G 247
G
Sbjct 241 G 241
>gi|333920625|ref|YP_004494206.1| putative fumarate reductase [Amycolicicoccus subflavus DQS3-9A1]
gi|333482846|gb|AEF41406.1| putative fumarate reductase [Amycolicicoccus subflavus DQS3-9A1]
Length=250
Score = 393 bits (1009), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 184/248 (75%), Positives = 213/248 (86%), Gaps = 3/248 (1%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
M D I +EV R+RPE E AP F +Y+VPL +EWAVLD L +IKD +DGTLS+RWSCRMGI
Sbjct 1 MADTITVEVFRFRPEQEPAPVFDSYDVPLRKEWAVLDALNHIKDQIDGTLSYRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGS GMT+NG+PKL+C+ FL DY PGPVRVEP++NFPVIRDLVV+I DFM KLP+VKPWL
Sbjct 61 CGSCGMTVNGEPKLSCSAFLVDYAPGPVRVEPLQNFPVIRDLVVNIDDFMEKLPTVKPWL 120
Query 121 VRH-DEPP--VEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALG 177
VR E P +ED E+ QTP +L+ +K++SMCINCMLCYSACPVYAL+P+FLGPA IALG
Sbjct 121 VRKAGESPEEIEDTEFLQTPEQLEDYKKYSMCINCMLCYSACPVYALEPEFLGPAVIALG 180
Query 178 QRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHAL 237
QRYNLDSRD+GA DRRDVLA+A GAWACTLVGECS ACPKGVDPAGAIQRYKLTAA+ A+
Sbjct 181 QRYNLDSRDEGAEDRRDVLASAQGAWACTLVGECSVACPKGVDPAGAIQRYKLTAASQAV 240
Query 238 KKLLFPWG 245
K LL PWG
Sbjct 241 KDLLMPWG 248
>gi|254231780|ref|ZP_04925107.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium
tuberculosis C]
gi|124600839|gb|EAY59849.1| fumarate reductase [iron-sulfur subunit] frdB [Mycobacterium
tuberculosis C]
Length=198
Score = 390 bits (1001), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 189/189 (100%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
Query 14 PEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGMTINGDPK 73
PEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGMTINGDPK
Sbjct 10 PEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGMTINGDPK 69
Query 74 LACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEPPVEDGEY 133
LACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEPPVEDGEY
Sbjct 70 LACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEPPVEDGEY 129
Query 134 RQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDSRDQGAADRR 193
RQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDSRDQGAADRR
Sbjct 130 RQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDSRDQGAADRR 189
Query 194 DVLAAADGA 202
DVLAAADGA
Sbjct 190 DVLAAADGA 198
>gi|289443006|ref|ZP_06432750.1| fumarate reductase, iron-sulfur protein [Mycobacterium tuberculosis
T46]
gi|289415925|gb|EFD13165.1| fumarate reductase, iron-sulfur protein [Mycobacterium tuberculosis
T46]
Length=189
Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/169 (100%), Positives = 169/169 (100%), Gaps = 0/169 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI
Sbjct 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL
Sbjct 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFL 169
VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFL
Sbjct 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFL 169
>gi|319943871|ref|ZP_08018152.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Lautropia mirabilis ATCC 51599]
gi|319743104|gb|EFV95510.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Lautropia mirabilis ATCC 51599]
Length=311
Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 134/239 (57%), Positives = 170/239 (72%), Gaps = 0/239 (0%)
Query 5 IVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSS 64
I +E RY P+ +SAP +Q+YEVP T + +VLDGL YIKDHLDGT+++RWSCRM +CGS
Sbjct 61 ITIECMRYNPDTDSAPRYQSYEVPFTHDMSVLDGLQYIKDHLDGTITYRWSCRMAVCGSC 120
Query 65 GMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHD 124
GM N P L+C FL DY PG +R+ P+ +FP++RDL VD SDF+AKL VKP+++ +
Sbjct 121 GMMANDMPVLSCQAFLRDYYPGTLRIAPLSHFPIVRDLAVDQSDFLAKLERVKPYIITEE 180
Query 125 EPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDS 184
DG QTPA++D + QFS CINCMLCY+ACP Y L+P+F GPAA+AL QRYN DS
Sbjct 181 PRTPADGPNLQTPAQMDQYYQFSQCINCMLCYAACPQYGLNPEFTGPAALALLQRYNADS 240
Query 185 RDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFP 243
RD+G A+R V+ A G W CTLVGECS CPKGVDPA AI K+ + + L P
Sbjct 241 RDEGKAERMPVINAESGVWGCTLVGECSVVCPKGVDPARAINLNKVNSTQDYFFRFLMP 299
>gi|237809231|ref|YP_002893671.1| fumarate reductase iron-sulfur subunit [Tolumonas auensis DSM
9187]
gi|237501492|gb|ACQ94085.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Tolumonas auensis DSM 9187]
Length=246
Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/244 (57%), Positives = 173/244 (71%), Gaps = 1/244 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
M + + +EV RYRPE ++ P Q Y+VP T E ++L+ LT+IKDH+D TLS+RWSCRM I
Sbjct 1 MAEIMEIEVLRYRPEEDNEPWTQRYQVPFTHEMSILEALTHIKDHIDSTLSYRWSCRMAI 60
Query 61 CGSSGMTINGDPKLACATFLADYLP-GPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPW 119
CGS GM +NG PKL C TFL DY+ G +R+EP+ NFP+ RDLVVD+SDFM KL +KP+
Sbjct 61 CGSCGMMVNGKPKLGCKTFLRDYISEGKIRLEPLANFPIERDLVVDMSDFMQKLEKIKPY 120
Query 120 LVRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQR 179
++ +E + DGEY QTP +L +KQFS CINC LCY+ACP YAL P+FLGPAAIAL R
Sbjct 121 IIPKEEKNLCDGEYLQTPKQLAQYKQFSQCINCGLCYAACPQYALKPEFLGPAAIALLYR 180
Query 180 YNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKK 239
YN DSRD +R ++ G W+CT VG CS CPKGVDPA AIQ YK +A +
Sbjct 181 YNEDSRDGAKEERMKLIHQESGVWSCTFVGFCSEVCPKGVDPAAAIQLYKAESAKDYVIA 240
Query 240 LLFP 243
+ P
Sbjct 241 MFKP 244
>gi|330828650|ref|YP_004391602.1| fumarate reductase iron-sulfur protein [Aeromonas veronii B565]
gi|328803786|gb|AEB48985.1| Fumarate reductase iron-sulfur protein [Aeromonas veronii B565]
Length=241
Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 133/239 (56%), Positives = 171/239 (72%), Gaps = 0/239 (0%)
Query 5 IVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSS 64
I +E+ RYRPE ++ P Q ++VP RE ++LD L YIKDHLD TLSFRWSCRM ICGS
Sbjct 2 IEIEILRYRPEQDNEPWMQTFQVPYQREMSLLDALQYIKDHLDSTLSFRWSCRMAICGSC 61
Query 65 GMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHD 124
GM +NG PKL C FL DYLPG + VEP+ NFP+ RDLVVD+SDF+ KL S+KP+++ +
Sbjct 62 GMMVNGVPKLGCKAFLRDYLPGKMTVEPLNNFPIERDLVVDMSDFIEKLESIKPYIIPSE 121
Query 125 EPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDS 184
+ DGEY QTPA++ +KQFS CINC LCY+ACP Y ++ F GPAA+AL RYN+D+
Sbjct 122 PRSLCDGEYIQTPAQMAQYKQFSQCINCGLCYAACPQYGINKKFTGPAALALAYRYNVDN 181
Query 185 RDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFP 243
RD GA +R +++ +G W CT VG CS CPKGVDPA AIQ K+ +A + + P
Sbjct 182 RDAGAKERMRIISQDEGVWGCTFVGYCSEVCPKGVDPAAAIQLGKVESAKDYMIAMFKP 240
>gi|334704008|ref|ZP_08519874.1| fumarate reductase iron-sulfur subunit [Aeromonas caviae Ae398]
Length=244
Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 131/243 (54%), Positives = 172/243 (71%), Gaps = 0/243 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
M + I +E+ RYRPE ++ P Q ++VP +E ++LD L YIKDHLD TLSFRWSCRM I
Sbjct 1 MAEMIEIEILRYRPEQDNEPWMQTFQVPYLKEMSLLDALQYIKDHLDSTLSFRWSCRMAI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGS GM +NG PKL C TFL DYLPG + +EP+ NFP+ RDLVVD+SDF+ KL S+KP++
Sbjct 61 CGSCGMMVNGIPKLGCKTFLRDYLPGKMTIEPLNNFPIERDLVVDMSDFIEKLESIKPYI 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
+ + + DGEY QTPA++ + QFSMCINC LCY+ACP Y ++ F GPAA+AL RY
Sbjct 121 IPSEPRNLCDGEYTQTPADMAKYHQFSMCINCGLCYAACPQYGINKKFTGPAALALAYRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
N D+RD + +R +++ +G W CT VG CS CPKGVDPA AIQ K+ +A + +
Sbjct 181 NADNRDSASRERMKIISQDEGVWGCTFVGYCSEVCPKGVDPAAAIQLGKVESAKDYMIAM 240
Query 241 LFP 243
P
Sbjct 241 FKP 243
>gi|117620626|ref|YP_857700.1| fumarate reductase iron-sulfur subunit [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117562033|gb|ABK38981.1| fumarate reductase iron-sulfur protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length=244
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 131/243 (54%), Positives = 172/243 (71%), Gaps = 0/243 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
M + I +E+ RYRPE ++ P Q ++VP +E ++LD L YIKDHLD TLSFRWSCRM I
Sbjct 1 MAEMIEIEILRYRPEQDNEPWMQTFQVPYLKEMSLLDALQYIKDHLDSTLSFRWSCRMAI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGS GM +NG PKL C TFL DYLPG + +EP+ NFP+ RDLVVD+SDF+ KL S+KP++
Sbjct 61 CGSCGMMVNGIPKLGCKTFLRDYLPGKMTIEPLNNFPIERDLVVDMSDFIEKLESIKPYI 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
+ + + DGEY QTPA++ + QFSMCINC LCY+ACP Y ++ F GPAA+AL RY
Sbjct 121 IPAEPRSLCDGEYTQTPADMAKYHQFSMCINCGLCYAACPQYGINKKFTGPAALALAYRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
N D+RD + +R +++ +G W CT VG CS CPKGVDPA AIQ K+ +A + +
Sbjct 181 NADNRDSASRERMKIISQDEGVWGCTFVGYCSEVCPKGVDPAAAIQLGKVESAKDYMIAM 240
Query 241 LFP 243
P
Sbjct 241 FKP 243
>gi|145298133|ref|YP_001140974.1| fumarate reductase iron-sulfur subunit [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142850905|gb|ABO89226.1| fumarate reductase, iron-sulfur protein [Aeromonas salmonicida
subsp. salmonicida A449]
Length=244
Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 130/243 (54%), Positives = 172/243 (71%), Gaps = 0/243 (0%)
Query 1 MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGI 60
M + I +E+ RYRPE ++ P Q ++VP +E ++LD L YIKD LD TLSFRWSCRM I
Sbjct 1 MAEMIEIEILRYRPEQDNEPWMQTFQVPYLKEMSLLDALQYIKDQLDSTLSFRWSCRMAI 60
Query 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
CGS GM +NG PKL C TFL DYLPG +++EP+ NFP+ RDLVVD+SDF+ KL S+KP++
Sbjct 61 CGSCGMMVNGIPKLGCKTFLRDYLPGKMKIEPLNNFPIERDLVVDMSDFIEKLESIKPYI 120
Query 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRY 180
+ + + DGEY QTPA++ + QFSMCINC LCY+ACP Y ++ F GPAA+AL RY
Sbjct 121 IPSEPRSLCDGEYTQTPADMAKYHQFSMCINCGLCYAACPQYGINKKFTGPAALALAYRY 180
Query 181 NLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKL 240
N D+RD + +R +++ +G W CT VG CS CPKGVDPA AIQ K+ +A + +
Sbjct 181 NADNRDSASKERMKIISQDEGVWGCTFVGYCSDVCPKGVDPAAAIQLGKVESAKDYMIAM 240
Query 241 LFP 243
P
Sbjct 241 FKP 243
>gi|332527673|ref|ZP_08403718.1| fumarate reductase iron-sulfur subunit [Rubrivivax benzoatilyticus
JA2]
gi|332112075|gb|EGJ12051.1| fumarate reductase iron-sulfur subunit [Rubrivivax benzoatilyticus
JA2]
Length=259
Score = 288 bits (736), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/245 (57%), Positives = 172/245 (71%), Gaps = 2/245 (0%)
Query 5 IVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSS 64
I +E R+ PE +SAP FQ+++VP + +VL GL YIKDH DG+L+FRWSCRM ICGS
Sbjct 14 IEIECLRFDPETDSAPRFQSWQVPFDDDTSVLQGLQYIKDHFDGSLTFRWSCRMAICGSC 73
Query 65 GMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHD 124
G ING P+L+C FL DY P VRVEP+ NF ++RDLVVD ++F+ KL SVKPW+ +
Sbjct 74 GKMINGVPQLSCHAFLRDYWPNKVRVEPLANFAIVRDLVVDQNEFLDKLESVKPWIQPCE 133
Query 125 EPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDS 184
V DG RQTPA+LD + QFS CINC+LCY+ACP L P+F+GPAA+AL RYN DS
Sbjct 134 NRSVADGPSRQTPAQLDQYYQFSQCINCLLCYAACPQVGLKPEFIGPAALALMHRYNADS 193
Query 185 RDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAAT--HALKKLLF 242
RD+G R DV A +G W CTLVG CS CPKGVDPA AI + K+ + ++KLL
Sbjct 194 RDRGWEARADVANAEEGVWGCTLVGYCSEVCPKGVDPAHAINQNKVNSTMDYFGVRKLLA 253
Query 243 PWGGG 247
P GG
Sbjct 254 PKGGA 258
>gi|119946885|ref|YP_944565.1| fumarate reductase iron-sulfur subunit [Psychromonas ingrahamii
37]
gi|119865489|gb|ABM04966.1| succinate dehydrogenase subunit B [Psychromonas ingrahamii 37]
Length=245
Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/239 (55%), Positives = 166/239 (70%), Gaps = 0/239 (0%)
Query 5 IVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSS 64
I ++V RYRPE++ P Q++EVP + + +VL+ L YIKDHLD T+SFRWSCRM ICGS
Sbjct 6 ITIDVLRYRPEMDEKPFTQSFEVPYSPDLSVLESLQYIKDHLDSTVSFRWSCRMAICGSC 65
Query 65 GMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHD 124
GM +NG PKL C FL DY P V + P+ NFP+ RDLVV + DF+ KL SVKP+L+
Sbjct 66 GMMVNGVPKLGCKVFLRDYFPKKVSLAPLANFPIERDLVVVMDDFIDKLESVKPYLIPEK 125
Query 125 EPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDS 184
E + +G +RQTP +++ FKQFSMCINC LCY+ACP YALD F GPAA+AL RYN DS
Sbjct 126 EKDLAEGPHRQTPLQMEKFKQFSMCINCGLCYAACPQYALDKKFTGPAALALLARYNRDS 185
Query 185 RDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFP 243
RD G A+R ++ +G W CT VG CS CPK VDPA AIQ K+ ++ L + P
Sbjct 186 RDNGEAERMKIVNQEEGVWGCTFVGYCSVVCPKDVDPAAAIQLLKVDSSKDYLIGMFKP 244
>gi|257092550|ref|YP_003166191.1| fumarate reductase iron-sulfur subunit [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045074|gb|ACV34262.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Candidatus Accumulibacter phosphatis clade IIA str. UW-1]
Length=251
Score = 280 bits (717), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 126/243 (52%), Positives = 170/243 (70%), Gaps = 0/243 (0%)
Query 5 IVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSS 64
I +EV RY PE + P Q +EVP T + +VL G+ YIKD+LDG+LSFRWSCRM ICGS
Sbjct 8 IEIEVLRYHPEKDKEPHKQVFEVPFTDDMSVLQGVQYIKDYLDGSLSFRWSCRMAICGSC 67
Query 65 GMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHD 124
GM ING+P L+C TFL DY P VRVE + +FP+ RDLV+++ F+ KL S++P+++ +
Sbjct 68 GMMINGEPSLSCQTFLRDYYPARVRVEALSHFPIERDLVINMEGFIEKLESIQPYIIPKE 127
Query 125 EPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDS 184
+ GEY QTP +L+A++QFS CINC+LCY+ACP + L+ F+GPAA AL RYN+DS
Sbjct 128 PRTLAQGEYLQTPEQLNAYEQFSSCINCLLCYAACPQFGLNSSFIGPAATALLHRYNVDS 187
Query 185 RDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFPW 244
RD G A+R +++ + +G + CT VG CS CPK VDPA A+ + K AA + L P
Sbjct 188 RDGGKAERMELINSEEGVFNCTAVGYCSEVCPKHVDPANAVNQNKTNAAADYFLRFLAPK 247
Query 245 GGG 247
GG
Sbjct 248 GGA 250
>gi|121998231|ref|YP_001003018.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Halorhodospira halophila SL1]
gi|121589636|gb|ABM62216.1| succinate dehydrogenase subunit B [Halorhodospira halophila SL1]
Length=254
Score = 278 bits (710), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 132/242 (55%), Positives = 167/242 (70%), Gaps = 0/242 (0%)
Query 4 RIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGS 63
I +EV RY PE ++AP +Q Y VP T + +VL+GL YIKDHLDGTL+FRWSCRM ICGS
Sbjct 6 HITLEVQRYHPEQDAAPRWQRYTVPYTPDMSVLEGLQYIKDHLDGTLTFRWSCRMAICGS 65
Query 64 SGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRH 123
G I+G+P+LAC FL DY PGPVRV + +FP+ RDLV+D +DF+ KL + + +L+
Sbjct 66 CGCMIDGEPELACHVFLRDYAPGPVRVTALDHFPIQRDLVIDHTDFLEKLETARAYLIPA 125
Query 124 DEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLD 183
D+ DG YRQTP E+ + ++ CINC+LCY+ACP Y PDFLGP +AL QRYNLD
Sbjct 126 DDRTPADGTYRQTPEEMSDYYAYAQCINCLLCYAACPQYGWHPDFLGPGILALVQRYNLD 185
Query 184 SRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFP 243
RD G+ R V+ A +G W CTLVG CS CPKGVDPA AI + K ++ L L P
Sbjct 186 HRDGGSRAREGVVDAEEGVWGCTLVGYCSEVCPKGVDPARAINQNKPASSARYLLDWLRP 245
Query 244 WG 245
G
Sbjct 246 GG 247
>gi|34498823|ref|NP_903038.1| fumarate reductase iron-sulfur subunit [Chromobacterium violaceum
ATCC 12472]
gi|34104675|gb|AAQ61032.1| fumarate reductase, subunit B [Chromobacterium violaceum ATCC
12472]
Length=248
Score = 275 bits (702), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 131/247 (54%), Positives = 172/247 (70%), Gaps = 2/247 (0%)
Query 1 MMDRIV-MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMG 59
M D+ + +EV RYRPE + P Q ++VP + + +VL GL YI+D+LDGTL+FRWSCR
Sbjct 1 MTDKTIHIEVLRYRPEQDKEPWLQGFDVPYSDDMSVLQGLQYIRDYLDGTLAFRWSCRQA 60
Query 60 ICGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPW 119
ICGS GM ++G PKLAC TFL DY PG VR+EP+ +FP+ RDLVV + DF+ KL S+ P+
Sbjct 61 ICGSCGMMVDGVPKLACKTFLRDY-PGRVRIEPLNHFPIERDLVVVLDDFIDKLESITPY 119
Query 120 LVRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQR 179
+V ++ P+ +GEY+QTPA++D + QFS CINC+LCY+ACP Y L+ DFLGP AIAL R
Sbjct 120 IVPKEDKPLSEGEYQQTPAQMDWYAQFSGCINCLLCYAACPQYGLNSDFLGPGAIALLHR 179
Query 180 YNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKK 239
YN DSRD + R +LAA +G + CT VG CS CPK VDPA A+ K A +
Sbjct 180 YNQDSRDGASEQRMALLAAQEGVFNCTAVGYCSEVCPKAVDPANAVNLNKTEVAKDYFLR 239
Query 240 LLFPWGG 246
+ P G
Sbjct 240 FVRPKGA 246
>gi|149909945|ref|ZP_01898594.1| succinate dehydrogenase [Moritella sp. PE36]
gi|149806959|gb|EDM66918.1| succinate dehydrogenase [Moritella sp. PE36]
Length=250
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 123/244 (51%), Positives = 167/244 (69%), Gaps = 5/244 (2%)
Query 5 IVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSS 64
I +++ RYRPE++ P Q +EVP + ++L+ L YIKD+LD T+SFRWSCRM ICGS
Sbjct 6 IKIDILRYRPEMDDKPFTQTFEVPYKADMSILEALQYIKDNLDATISFRWSCRMAICGSC 65
Query 65 GMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV--- 121
G+ ++G PKL C FL DY P + +EP+ NFP+ RDLVV + DF+ KL +KP+++
Sbjct 66 GLMVDGVPKLGCKAFLRDYFPNKISLEPLANFPIERDLVVVMDDFIKKLEEIKPYIIPEK 125
Query 122 --RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQR 179
D+ + +G Y+QTP +++ +K+FSMCINC LCYSACP YALD F+GPAA+AL R
Sbjct 126 TGTQDKKCLSEGTYKQTPEQMEKYKKFSMCINCGLCYSACPQYALDTKFIGPAALALLAR 185
Query 180 YNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKK 239
YN DSRD G A+R ++ +G W CT VG CS CPKGVDPA AIQ K+ ++ L
Sbjct 186 YNRDSRDAGTAERMKIVNQEEGVWGCTFVGYCSVVCPKGVDPAAAIQLLKVESSKDYLIG 245
Query 240 LLFP 243
+ P
Sbjct 246 MFRP 249
>gi|312115714|ref|YP_004013310.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodomicrobium vannielii ATCC 17100]
gi|311220843|gb|ADP72211.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodomicrobium vannielii ATCC 17100]
Length=251
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/237 (54%), Positives = 161/237 (68%), Gaps = 0/237 (0%)
Query 5 IVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSS 64
I + V RY PE + P Q++ VP T + +VL GL +IKD +DG+L++RWSCRM ICGS
Sbjct 9 IELRVLRYNPETDERPHHQSFTVPYTSDMSVLQGLQWIKDTVDGSLTYRWSCRMAICGSC 68
Query 65 GMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHD 124
GM IN +PKLAC T L D PGPV VEP+ +FP+ RDLVV + DF+ K+ SV PWL+
Sbjct 69 GMMINAEPKLACHTLLRDLAPGPVTVEPLNHFPIERDLVVTVDDFVKKIESVTPWLIPKH 128
Query 125 EPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDS 184
PV +G Y QTPA+L A++ FS CINCMLCY+ACP Y +P F+GPAA+A+ QRY+ DS
Sbjct 129 PKPVSEGPYNQTPAQLAAYENFSACINCMLCYAACPQYGENPKFIGPAAMAILQRYDGDS 188
Query 185 RDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
RD G+A R D + DG W CT VG CS CPK VDP A+ + K+ A + L
Sbjct 189 RDGGSALRIDAVHGEDGVWGCTAVGACSDVCPKAVDPMHAVNQNKMNTALDYFLRFL 245
>gi|240948012|ref|ZP_04752430.1| fumarate reductase iron-sulfur subunit [Actinobacillus minor
NM305]
gi|240297682|gb|EER48156.1| fumarate reductase iron-sulfur subunit [Actinobacillus minor
NM305]
Length=241
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 123/244 (51%), Positives = 170/244 (70%), Gaps = 3/244 (1%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
M+++ +EV RY PE ++ P + +EVP + ++LD L YIKD L LS+RWSCRM IC
Sbjct 1 MEKMTIEVLRYNPEQDNEPHLEKFEVPFDGQTSLLDALNYIKDELQPELSYRWSCRMAIC 60
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +NG PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ L +++P+++
Sbjct 61 GSCGMMVNGKPKLACKTFLRDY-SGHMRIEPLSNFPIERDLVVDLSHFIDSLEAIQPYII 119
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+ P E +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+F+GPAA+ L RYN
Sbjct 120 DNKAP--EGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFIGPAALTLAHRYN 177
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G R +L++ +G W+CT VG CS CPK V PA AI + KL +A + +L
Sbjct 178 LDNRDNGREQRMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAINQGKLESAKDYVISIL 237
Query 242 FPWG 245
P G
Sbjct 238 KPKG 241
>gi|46143535|ref|ZP_00135022.2| COG0479: Succinate dehydrogenase/fumarate reductase, Fe-S protein
subunit [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|126208992|ref|YP_001054217.1| fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|190150858|ref|YP_001969383.1| fumarate reductase iron-sulfur protein [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
22 more sequence titles
Length=244
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/244 (52%), Positives = 169/244 (70%), Gaps = 3/244 (1%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
+ ++ +EV RY PE +S P YEVP + ++LD L YIKD L+ LS+RWSCRM IC
Sbjct 4 LSKMTIEVLRYNPETDSEPHLDKYEVPFDSQTSLLDALGYIKDELEPELSYRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +NG PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ + ++KP+++
Sbjct 64 GSCGMMVNGKPKLACKTFLRDY-SGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVI 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+ P E +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 DNKAP--EGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 180
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G R +L++ +G W+CT VG CS CPK V PA AI + KL +A + +L
Sbjct 181 LDNRDNGREQRMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAINQGKLESAKDYVISML 240
Query 242 FPWG 245
P G
Sbjct 241 KPKG 244
>gi|322513265|ref|ZP_08066389.1| fumarate reductase subunit B [Actinobacillus ureae ATCC 25976]
gi|322120972|gb|EFX92819.1| fumarate reductase subunit B [Actinobacillus ureae ATCC 25976]
Length=244
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/244 (52%), Positives = 170/244 (70%), Gaps = 3/244 (1%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
++++ +EV RY PE +S P YEVP + ++LD L YIKD L+ LS+RWSCRM IC
Sbjct 4 LNKMTIEVLRYNPETDSEPHLDKYEVPFDSQTSLLDVLGYIKDELEPELSYRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +NG PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ + ++KP+++
Sbjct 64 GSCGMMVNGKPKLACKTFLRDY-SGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVI 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+ P E +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 DNKAP--EGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 180
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G R +L++ +G W+CT VG CS CPK V PA AI + KL +A + +L
Sbjct 181 LDNRDNGREQRMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAINQGKLESAKDYVISML 240
Query 242 FPWG 245
P G
Sbjct 241 KPKG 244
>gi|307250804|ref|ZP_07532733.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306857163|gb|EFM89290.1| Fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length=244
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/244 (52%), Positives = 169/244 (70%), Gaps = 3/244 (1%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
+ ++ +EV RY PE +S P YEVP + ++LD L YIKD L+ LS+RWSCRM IC
Sbjct 4 LSKMTIEVLRYNPETDSEPHLDKYEVPFDSQTSLLDALGYIKDELEPELSYRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +NG PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ + ++KP+++
Sbjct 64 GSCGMMVNGKPKLACKTFLRDY-SGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVI 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+ P E +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 DNKAP--EGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 180
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G R +L++ +G W+CT VG CS CPK V PA AI + KL +A + +L
Sbjct 181 LDNRDNGREQRMKLLSSKNGVWSCTFVGYCSEMCPKHVGPASAINQGKLESAKDYVISML 240
Query 242 FPWG 245
P G
Sbjct 241 KPKG 244
>gi|165976958|ref|YP_001652551.1| fumarate reductase iron-sulfur subunit [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165877059|gb|ABY70107.1| fumarate reductase iron-sulfur protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length=244
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/244 (52%), Positives = 168/244 (69%), Gaps = 3/244 (1%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
+ ++ +EV RY PE +S P YEVP + ++LD L YIKD L+ LS+RWSCRM IC
Sbjct 4 LSKMTIEVLRYNPETDSEPHLDKYEVPFDSQTSLLDALGYIKDELEPELSYRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +NG PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ + ++KP+++
Sbjct 64 GSCGMMVNGKPKLACKTFLRDY-SGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVI 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
D E +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 --DNKASEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 180
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G R +L++ +G W+CT VG CS CPK V PA AI + KL +A + +L
Sbjct 181 LDNRDNGREQRMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAINQGKLESAKDYVISML 240
Query 242 FPWG 245
P G
Sbjct 241 KPKG 244
>gi|33151305|ref|NP_872658.1| fumarate reductase iron-sulfur subunit [Haemophilus ducreyi 35000HP]
gi|33147525|gb|AAP95047.1| fumarate reductase iron-sulfur protein [Haemophilus ducreyi 35000HP]
Length=244
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/244 (52%), Positives = 168/244 (69%), Gaps = 3/244 (1%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
+ ++ +EV RY PEI+ P YEVP + ++LD L YIKD L+ LS+RWSCRM IC
Sbjct 4 LSKMTIEVLRYNPEIDCEPHLDKYEVPFDSQTSLLDALGYIKDELEPELSYRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +NG PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ + ++KP+++
Sbjct 64 GSCGMMVNGKPKLACKTFLRDY-SGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYVI 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+ P E +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 DNKTP--EGQRAKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 180
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G R +L + +G W+CT VG CS CPK V PA AI + KL +A + +L
Sbjct 181 LDNRDNGVEQRMKLLNSKNGVWSCTFVGYCSEVCPKHVGPASAINQGKLESAKDYVISML 240
Query 242 FPWG 245
P G
Sbjct 241 KPKG 244
>gi|1074114|pir||G64097 fumarate reductase (EC 1.3.99.1) iron-sulfur protein - Haemophilus
influenzae (strain Rd KW20)
Length=276
Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 127/250 (51%), Positives = 169/250 (68%), Gaps = 13/250 (5%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
+EV RY PEI+ P Y+VP + ++LD L YIKD L+ +LS+RWSCRM ICGS GM
Sbjct 29 VEVLRYNPEIDQEPHLSTYQVPYDNQTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 88
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
+N PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ L ++KP+++ +E
Sbjct 89 MVNNKPKLACKTFLRDY-SGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIG-NEA 146
Query 127 PVEDGE-----------YRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIA 175
P DG+ +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+FLGPAAI
Sbjct 147 PALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFLGPAAIT 206
Query 176 LGQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATH 235
+ RYNLD+RD G A R +L +G W+CT VG CS CPK VDPA AI + K+ +A
Sbjct 207 MAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGKVESAKD 266
Query 236 ALKKLLFPWG 245
+ +L P G
Sbjct 267 YVISMLKPKG 276
>gi|242237922|ref|YP_002986103.1| fumarate reductase iron-sulfur subunit [Dickeya dadantii Ech703]
gi|242129979|gb|ACS84281.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Dickeya dadantii Ech703]
Length=244
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/242 (53%), Positives = 169/242 (70%), Gaps = 2/242 (0%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
+ + MEV RY PE ++AP F+ Y VP +RE ++LD L YIKD+L LS+RWSCRM IC
Sbjct 4 LQTLKMEVMRYNPEQDNAPHFETYSVPYSRETSLLDALGYIKDNLAPDLSYRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +N PKLAC TFL DY G +++E + NFP+ RDLVVD++ F+ L ++KP+++
Sbjct 64 GSCGMMVNNVPKLACKTFLRDYADG-MKIEALGNFPIERDLVVDMTHFIESLEAIKPYVI 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+D P E G +QTPA++ + QFS CINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 GNDRKP-EQGTNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 181
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LDSRD G +R +L +G W+CT VG CS CPK VDPA AIQ+ K+ +A + +L
Sbjct 182 LDSRDHGKKERMPMLNGDNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESAKDFMIAML 241
Query 242 FP 243
P
Sbjct 242 KP 243
>gi|319775234|ref|YP_004137722.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae
F3047]
gi|319897672|ref|YP_004135869.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae
F3031]
gi|317433178|emb|CBY81552.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae
F3031]
gi|317449825|emb|CBY86033.1| fumarate reductase iron-sulfur protein [Haemophilus influenzae
F3047]
Length=256
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/250 (51%), Positives = 169/250 (68%), Gaps = 13/250 (5%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
+EV RY PEI+ P Y+VP + ++LD L YIKD L+ +LS+RWSCRM ICGS GM
Sbjct 9 VEVLRYNPEIDQEPHLNTYQVPYDNQTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 68
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
+N PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ L ++KP+++ +E
Sbjct 69 MVNNKPKLACKTFLRDY-SGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIG-NEA 126
Query 127 PVEDGE-----------YRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIA 175
P DG+ +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+FLGPAAI
Sbjct 127 PALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFLGPAAIT 186
Query 176 LGQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATH 235
+ RYNLD+RD G A R +L +G W+CT VG CS CPK VDPA AI + K+ +A
Sbjct 187 MAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGKVESAKD 246
Query 236 ALKKLLFPWG 245
+ +L P G
Sbjct 247 YVISMLKPKG 256
>gi|16272775|ref|NP_438994.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae
Rd KW20]
gi|68249429|ref|YP_248541.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae
86-028NP]
gi|145630583|ref|ZP_01786363.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae
R3021]
24 more sequence titles
Length=256
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/250 (51%), Positives = 169/250 (68%), Gaps = 13/250 (5%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
+EV RY PEI+ P Y+VP + ++LD L YIKD L+ +LS+RWSCRM ICGS GM
Sbjct 9 VEVLRYNPEIDQEPHLSTYQVPYDNQTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 68
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
+N PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ L ++KP+++ +E
Sbjct 69 MVNNKPKLACKTFLRDY-SGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIG-NEA 126
Query 127 PVEDGE-----------YRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIA 175
P DG+ +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+FLGPAAI
Sbjct 127 PALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFLGPAAIT 186
Query 176 LGQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATH 235
+ RYNLD+RD G A R +L +G W+CT VG CS CPK VDPA AI + K+ +A
Sbjct 187 MAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGKVESAKD 246
Query 236 ALKKLLFPWG 245
+ +L P G
Sbjct 247 YVISMLKPKG 256
>gi|90407178|ref|ZP_01215366.1| succinate dehydrogenase [Psychromonas sp. CNPT3]
gi|90311754|gb|EAS39851.1| succinate dehydrogenase [Psychromonas sp. CNPT3]
Length=245
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/241 (51%), Positives = 161/241 (67%), Gaps = 0/241 (0%)
Query 3 DRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICG 62
D +++++ RY PE + P Q++E+P ++LD L YIKD++D T+SFRWSC+M ICG
Sbjct 4 DMMLIDILRYHPETDDKPYTQSFELPYDENMSILDALQYIKDNIDATVSFRWSCKMAICG 63
Query 63 SSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVR 122
S G+ +N PKL C FL DY P + + P+ NFP+ RDLVV + DFM KL SVKP+L+
Sbjct 64 SCGLMVNNVPKLGCKVFLRDYYPKTISLAPLTNFPIERDLVVVMDDFMEKLESVKPYLIP 123
Query 123 HDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNL 182
D GEY+QTP +++ +KQFSMCINC LCY+ACP Y LD F+GPAA+AL RY
Sbjct 124 GDNVCTAGGEYKQTPLQMEKYKQFSMCINCGLCYAACPQYGLDKHFIGPAALALLARYER 183
Query 183 DSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLF 242
D RD G+A R ++ +G W CT VG CS CPKGVDPA AIQ K+ ++ L L
Sbjct 184 DDRDAGSAQRMKIVNQEEGVWGCTFVGYCSVVCPKGVDPAAAIQLLKVESSKDYLIGLFN 243
Query 243 P 243
P
Sbjct 244 P 244
>gi|341949444|gb|EGT76048.1| Fumarate reductase iron-sulfur subunit [Haemophilus haemolyticus
M19501]
gi|341950833|gb|EGT77418.1| Fumarate reductase iron-sulfur subunit [Haemophilus haemolyticus
M21127]
Length=256
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/250 (51%), Positives = 169/250 (68%), Gaps = 13/250 (5%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
+EV RY PEI+ P Y+VP + ++LD L YIKD L+ +LS+RWSCRM ICGS GM
Sbjct 9 VEVLRYNPEIDQEPHLSTYQVPYDNQTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 68
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
+N PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ L ++KP+++ +E
Sbjct 69 MVNNKPKLACKTFLRDY-SGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIG-NEA 126
Query 127 PVEDGE-----------YRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIA 175
P DG+ +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+FLGPAAI
Sbjct 127 PALDGKPHPSKELQASRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFLGPAAIT 186
Query 176 LGQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATH 235
+ RYNLD+RD G A R +L +G W+CT VG CS CPK VDPA AI + K+ +A
Sbjct 187 MAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGKVESAKD 246
Query 236 ALKKLLFPWG 245
+ +L P G
Sbjct 247 YVISMLKPKG 256
>gi|238918353|ref|YP_002931867.1| fumarate reductase iron-sulfur subunit [Edwardsiella ictaluri
93-146]
gi|238867921|gb|ACR67632.1| fumarate reductase iron-sulfur subunit [Edwardsiella ictaluri
93-146]
Length=244
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/242 (53%), Positives = 167/242 (70%), Gaps = 2/242 (0%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
M + MEV RY PE ++ P F YEVP ++LD L Y+KD+L LSFRWSCRM IC
Sbjct 4 MKNLKMEVMRYNPEQDAEPRFVTYEVPYDDATSLLDALLYVKDNLAPDLSFRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM ++ PKLAC TFL DY P +RVE + NFPV RDLVVD++ F+ L ++KP+++
Sbjct 64 GSCGMMVDNVPKLACKTFLRDY-PNGMRVEALANFPVERDLVVDMTHFIESLEAIKPYVI 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+D P E+G +QTPAE++ + QFS CINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 GNDRKP-EEGTNKQTPAEMEKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 181
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G +R VL +G W+CT VG CS CPK VDPA AIQ+ K+ +A + +L
Sbjct 182 LDNRDHGKKERMPVLNTQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESAKDFMIAML 241
Query 242 FP 243
P
Sbjct 242 KP 243
>gi|27364669|ref|NP_760197.1| fumarate reductase iron-sulfur subunit [Vibrio vulnificus CMCP6]
gi|37681282|ref|NP_935891.1| fumarate reductase iron-sulfur subunit [Vibrio vulnificus YJ016]
gi|320155064|ref|YP_004187443.1| succinate dehydrogenase flavoprotein subunit [Vibrio vulnificus
MO6-24/O]
gi|27360814|gb|AAO09724.1| Succinate dehydrogenase iron-sulfur protein [Vibrio vulnificus
CMCP6]
gi|37200033|dbj|BAC95862.1| fumarate reductase, iron-sulfur protein [Vibrio vulnificus YJ016]
gi|319930376|gb|ADV85240.1| succinate dehydrogenase flavoprotein subunit [Vibrio vulnificus
MO6-24/O]
Length=252
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 121/239 (51%), Positives = 169/239 (71%), Gaps = 2/239 (0%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
+++ RY P ++ P FQA+EVP +VLD L Y+KDHLD LS+RWSCRM ICGS G+
Sbjct 9 VDILRYDPATDAEPRFQAFEVPFDETMSVLDALGYVKDHLDKNLSYRWSCRMAICGSCGI 68
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
+NG PKLAC +FL DY P V++EP+ NFP+ +DL+VD++ F+ +L ++KP+++ +D
Sbjct 69 MVNGVPKLACKSFLRDY-PDGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIGNDRK 127
Query 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDSRD 186
P EDG QTP +L +KQF+ CINC LCY+ACP + L+P+F+GPAA+ L RYNLDSRD
Sbjct 128 P-EDGTNLQTPEQLAKYKQFAGCINCGLCYAACPQFGLNPEFIGPAALTLAHRYNLDSRD 186
Query 187 QGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFPWG 245
G A+R ++ +GAW CT VG CS CPK VDPA A+ + K+ ++ + +L P G
Sbjct 187 NGKAERMKLINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGKVESSMDFVIAMLKPDG 245
>gi|269137695|ref|YP_003294395.1| fumarate reductase iron-sulfur subunit [Edwardsiella tarda EIB202]
gi|267983355|gb|ACY83184.1| fumarate reductase iron-sulfur subunit [Edwardsiella tarda EIB202]
gi|304557751|gb|ADM40415.1| Succinate dehydrogenase iron-sulfur protein [Edwardsiella tarda
FL6-60]
Length=244
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/242 (53%), Positives = 167/242 (70%), Gaps = 2/242 (0%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
M + MEV RY PE ++ P F YEVP ++LD L Y+KD+L LSFRWSCRM IC
Sbjct 4 MKNLKMEVMRYNPEQDAEPRFVTYEVPYDDTTSLLDALLYVKDNLAPDLSFRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM ++ PKLAC TFL D+ P +RVE + NFPV RDLVVD++ F+ L ++KP+++
Sbjct 64 GSCGMMVDNVPKLACKTFLRDH-PNGMRVEALANFPVERDLVVDMTHFIESLEAIKPYVI 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+D P EDG +QTPAE++ + QFS CINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 GNDRKP-EDGTNKQTPAEMEKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 181
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G +R VL +G W+CT VG CS CPK VDPA AIQ+ K+ +A + +L
Sbjct 182 LDNRDHGKKERMPVLNTQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESAKDFMIAML 241
Query 242 FP 243
P
Sbjct 242 KP 243
>gi|342864327|ref|ZP_08720919.1| fumarate reductase iron-sulfur protein [Avibacterium paragallinarum
AVPAR72]
gi|341922511|gb|EGT72047.1| fumarate reductase iron-sulfur protein [Avibacterium paragallinarum
AVPAR72]
Length=256
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/247 (50%), Positives = 170/247 (69%), Gaps = 11/247 (4%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
+EV RY PE++ P + Y+VP + ++LD L YIKD L+ LS+RWSCRM ICGS GM
Sbjct 9 IEVLRYNPEVDKEPYLRTYQVPYDSQTSLLDALGYIKDKLEPELSYRWSCRMAICGSCGM 68
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
+N PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ L S+KP+++ ++ P
Sbjct 69 MVNNKPKLACKTFLRDY-SGHMRIEPLANFPIERDLVVDLSHFIESLESIKPYIIGNEAP 127
Query 127 PVEDGEY----------RQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIAL 176
P++ + +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+F+GPAAI L
Sbjct 128 PLDGKPHPSAELAKSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFVGPAAITL 187
Query 177 GQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHA 236
RYNLD+RD G A+R +L +G W+CT VG CS CPK V+PA A+ + K+ +A
Sbjct 188 AHRYNLDNRDHGKAERMKILNGDNGVWSCTFVGYCSEVCPKHVNPASAVNQGKIESAKDY 247
Query 237 LKKLLFP 243
+ +L P
Sbjct 248 VLAMLKP 254
>gi|341956008|gb|EGT82451.1| Fumarate reductase iron-sulfur subunit [Haemophilus haemolyticus
M21639]
Length=256
Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/248 (52%), Positives = 168/248 (68%), Gaps = 13/248 (5%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
+EV RY PEI+ P Y+VP + ++LD L YIKD L+ +LS+RWSCRM ICGS GM
Sbjct 9 VEVLRYNPEIDQEPHLSTYQVPYDNQTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 68
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
IN PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ L ++KP+++ +E
Sbjct 69 MINNKPKLACKTFLRDY-SGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIG-NEA 126
Query 127 PVEDGE-----------YRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIA 175
P DG+ +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+FLGPAAI
Sbjct 127 PALDGKPHPSKELQASRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFLGPAAIT 186
Query 176 LGQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATH 235
+ RYNLD+RD G A R +L +G W+CT VG CS CPK VDPA AI + K+ +A
Sbjct 187 MAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGKVESAKD 246
Query 236 ALKKLLFP 243
+ +L P
Sbjct 247 YVISMLKP 254
>gi|294634438|ref|ZP_06712974.1| fumarate reductase, iron-sulfur protein [Edwardsiella tarda ATCC
23685]
gi|291092148|gb|EFE24709.1| fumarate reductase, iron-sulfur protein [Edwardsiella tarda ATCC
23685]
Length=244
Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/242 (53%), Positives = 167/242 (70%), Gaps = 2/242 (0%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
M + MEV RY PE ++ P F Y+VP ++LD L Y+KD+L LSFRWSCRM IC
Sbjct 4 MKNLKMEVMRYNPEQDAEPHFATYDVPYDETTSLLDALLYVKDNLAPDLSFRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM ++ PKLAC TFL DY P +R+E + NFPV RDLVVD++ F+ L ++KP+++
Sbjct 64 GSCGMMVDNVPKLACKTFLRDY-PNGMRIEALANFPVERDLVVDMTHFIESLEAIKPYVI 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+D P E+G +QTPAE++ + QFS CINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 GNDRKP-EEGTNKQTPAEMEKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 181
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G +R VL +G W+CT VG CS CPK VDPA AIQ+ K+ +A + +L
Sbjct 182 LDNRDHGKKERMPVLNTQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESAKDFMIAML 241
Query 242 FP 243
P
Sbjct 242 KP 243
>gi|149192248|ref|ZP_01870462.1| fumarate reductase iron-sulfur subunit [Vibrio shilonii AK1]
gi|148833921|gb|EDL50944.1| fumarate reductase iron-sulfur subunit [Vibrio shilonii AK1]
Length=246
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 120/237 (51%), Positives = 169/237 (72%), Gaps = 2/237 (0%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
+E+ RY PE +S P FQ +EVP +VLD + YIKDHLD LS+RWSCRM ICGS G+
Sbjct 9 VEILRYDPEKDSEPYFQTFEVPFDETMSVLDAIGYIKDHLDKDLSYRWSCRMAICGSCGI 68
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
+NG PKLAC +FL D+ G +++EP+ NFP+ +DL+VD++ F+ +L ++KP+++ +D
Sbjct 69 MVNGVPKLACKSFLRDHQNG-LKIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIGNDRK 127
Query 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDSRD 186
P EDG QTP ++ +KQF+ CINC LCY+ACP + L+P+F+GPAA+ L RYNLDSRD
Sbjct 128 P-EDGTNIQTPEQMAKYKQFAGCINCGLCYAACPQFGLNPEFIGPAALTLAHRYNLDSRD 186
Query 187 QGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFP 243
GAA+R ++ +GAW CT VG CS CPK VDPA A+ + K+ ++ + +L P
Sbjct 187 NGAAERMKMINGENGAWGCTFVGYCSEVCPKNVDPAAAVNQGKVESSKDFVIAMLKP 243
>gi|261493894|ref|ZP_05990406.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495160|ref|ZP_05991624.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|110735301|gb|ABG89221.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica]
gi|261309230|gb|EEY10469.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261310496|gb|EEY11687.1| fumarate reductase iron-sulfur protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length=243
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 122/242 (51%), Positives = 170/242 (71%), Gaps = 3/242 (1%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
+D++ +EV RY PE +S P YEVP + ++LD L +IKD L+ LS+RWSCRM IC
Sbjct 4 LDKMTIEVLRYNPESDSEPHLDRYEVPYDSQTSLLDALGFIKDELEPELSYRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +NG PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ + ++KP+++
Sbjct 64 GSCGMMVNGKPKLACKTFLRDY-SGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYII 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+ P E +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 DNKAP--EGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 180
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G +R +L++ +G W+CT VG CS CPK V PA A+ + KL +A + ++
Sbjct 181 LDNRDNGREERMKLLSSKNGVWSCTFVGYCSEVCPKHVGPASAVNQGKLESAKDYVISMI 240
Query 242 FP 243
P
Sbjct 241 KP 242
>gi|145632193|ref|ZP_01787928.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae
3655]
gi|145634754|ref|ZP_01790462.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae
PittAA]
gi|229844702|ref|ZP_04464841.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae
6P18H1]
gi|144987100|gb|EDJ93630.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae
3655]
gi|145267920|gb|EDK07916.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae
PittAA]
gi|229812416|gb|EEP48106.1| fumarate reductase iron-sulfur subunit [Haemophilus influenzae
6P18H1]
Length=256
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/256 (51%), Positives = 172/256 (68%), Gaps = 15/256 (5%)
Query 1 MMDRIVM--EVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRM 58
M++ VM EV RY PEI+ P Y+VP + ++LD L YIKD L+ +LS+RWSCRM
Sbjct 1 MINSPVMNVEVLRYNPEIDQEPHLSTYQVPYDNQTSLLDALGYIKDKLEPSLSYRWSCRM 60
Query 59 GICGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKP 118
ICGS GM +N PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ L ++KP
Sbjct 61 AICGSCGMMVNNKPKLACKTFLRDY-SGHMRIEPLANFPIERDLVVDLSHFIESLEAIKP 119
Query 119 WLVRHDEPPVEDGE-----------YRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD 167
+++ +E P DG+ +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+
Sbjct 120 YIIG-NEAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPE 178
Query 168 FLGPAAIALGQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQR 227
FLGPAAI + RYNLD+RD G A R +L +G W+CT VG CS CPK VDPA AI +
Sbjct 179 FLGPAAITMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQ 238
Query 228 YKLTAATHALKKLLFP 243
K+ +A + +L P
Sbjct 239 GKVESAKDYVISMLKP 254
>gi|271502188|ref|YP_003335214.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Dickeya dadantii Ech586]
gi|270345743|gb|ACZ78508.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Dickeya dadantii Ech586]
Length=245
Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/242 (52%), Positives = 167/242 (70%), Gaps = 1/242 (0%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
M + MEV RY PE ++AP F Y+VP TRE ++LD L YIKD+L LS+RWSCRM IC
Sbjct 4 MKTLKMEVMRYNPEQDNAPHFDTYDVPYTRETSLLDALGYIKDNLAPDLSYRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +N PKLAC TFL DY ++VE + NFP+ RDLVVD++ F+ L ++KP+++
Sbjct 64 GSCGMMVNNVPKLACKTFLRDYASSGMKVEALGNFPIERDLVVDMTHFIESLEAIKPYII 123
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
++ P + G QTPA++ + QFS CINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 124 GNNRTP-DQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 182
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G +R L + +G W+CT VG CS CPK VDPA AIQ+ K+ +A + +L
Sbjct 183 LDNRDHGKKERMPQLNSDNGVWSCTFVGYCSEVCPKHVDPAAAIQQSKVESAKDFMIAML 242
Query 242 FP 243
P
Sbjct 243 RP 244
>gi|309973674|gb|ADO96875.1| Fumarate reductase, subunit B [Haemophilus influenzae R2846]
Length=256
Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 126/248 (51%), Positives = 169/248 (69%), Gaps = 13/248 (5%)
Query 7 MEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
+EV RY PEI+ P Y+VP + ++LD L YIKD L+ +LS+RWSCRM ICGS GM
Sbjct 9 IEVLRYNPEIDQEPHLSTYQVPYDNQTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 68
Query 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
+N PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ L ++KP+++ +E
Sbjct 69 MVNNKPKLACKTFLRDY-SGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIG-NEA 126
Query 127 PVEDGE-----------YRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIA 175
P DG+ +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+FLGPAAI
Sbjct 127 PALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFLGPAAIT 186
Query 176 LGQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATH 235
+ RYNLD+RD G A R +L + +G W+CT VG CS CPK VDPA AI + K+ +A
Sbjct 187 MAHRYNLDNRDHGKAKRMPLLNSKNGVWSCTFVGYCSEVCPKHVDPASAINQGKVESAKD 246
Query 236 ALKKLLFP 243
+ +L P
Sbjct 247 YVISMLKP 254
>gi|254362604|ref|ZP_04978698.1| succinate dehydrogenase [Mannheimia haemolytica PHL213]
gi|153094212|gb|EDN75094.1| succinate dehydrogenase [Mannheimia haemolytica PHL213]
Length=243
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 122/242 (51%), Positives = 170/242 (71%), Gaps = 3/242 (1%)
Query 2 MDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGIC 61
+D++ +EV RY PE +S P YEVP + ++LD L +IKD L+ LS+RWSCRM IC
Sbjct 4 LDKMTIEVLRYNPESDSEPHLDRYEVPYDSQTSLLDALGFIKDELEPELSYRWSCRMAIC 63
Query 62 GSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLV 121
GS GM +NG PKLAC TFL DY G +R+EP+ NFP+ RDLVVD+S F+ + ++KP+++
Sbjct 64 GSCGMMVNGKPKLACKTFLRDY-SGFMRIEPLANFPIERDLVVDLSHFIDSIEAIKPYII 122
Query 122 RHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYN 181
+ P E +QTPA+L+ ++QFSMCINC LCY+ACP + L+P+F+GPAAI L RYN
Sbjct 123 DNKAP--EGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPEFIGPAAITLAHRYN 180
Query 182 LDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLL 241
LD+RD G +R +L++ +G W+CT VG CS CPK V PA A+ + KL +A + ++
Sbjct 181 LDNRDNGREERMKLLSSKNGDWSCTFVGYCSEVCPKHVGPASAVNQGKLESAKDYVISMI 240
Query 242 FP 243
P
Sbjct 241 KP 242
Lambda K H
0.323 0.139 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 349499277540
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40