BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1554
Length=126
Score E
Sequences producing significant alignments: (Bits) Value
gi|31792738|ref|NP_855231.1| fumarate reductase iron-sulfur subu... 248 3e-64
gi|121637474|ref|YP_977697.1| fumarate reductase frdC [Mycobacte... 247 3e-64
gi|15608692|ref|NP_216070.1| fumarate reductase subunit C [Mycob... 245 2e-63
gi|15841021|ref|NP_336058.1| fumarate reductase subunit C [Mycob... 243 5e-63
gi|339294529|gb|AEJ46640.1| fumarate reductase frdC [Mycobacteri... 243 8e-63
gi|289753640|ref|ZP_06513018.1| fumarate reductase subunit C [My... 242 1e-62
gi|254231781|ref|ZP_04925108.1| fumarate reductase [membrane anc... 240 6e-62
gi|340626574|ref|YP_004745026.1| putative fumarate reductase [me... 207 3e-52
gi|224989949|ref|YP_002644636.1| putative fumarate reductase [My... 198 2e-49
gi|333920624|ref|YP_004494205.1| Fumarate reductase subunit C [A... 137 8e-31
gi|90407177|ref|ZP_01215365.1| putative fumarate reductase [Psyc... 90.5 7e-17
gi|334123793|ref|ZP_08497811.1| fumarate reductase subunit C [En... 85.5 2e-15
gi|296100925|ref|YP_003611071.1| fumarate reductase subunit C [E... 85.1 3e-15
gi|295098314|emb|CBK87404.1| Fumarate reductase subunit C [Enter... 83.6 8e-15
gi|345297557|ref|YP_004826915.1| Fumarate reductase subunit C [E... 82.4 2e-14
gi|149909944|ref|ZP_01898593.1| fumarate reductase subunit C [Mo... 82.0 3e-14
gi|336248333|ref|YP_004592043.1| fumarate reductase subunit C [E... 81.3 4e-14
gi|170766843|ref|ZP_02901296.1| fumarate reductase, cytochrome b... 80.9 6e-14
gi|323498093|ref|ZP_08103097.1| fumarate reductase subunit C [Vi... 80.5 7e-14
gi|237729090|ref|ZP_04559571.1| FrdC [Citrobacter sp. 30_2] >gi|... 80.1 9e-14
gi|300715026|ref|YP_003739829.1| Fumarate reductase, cytochrome ... 80.1 9e-14
gi|323494459|ref|ZP_08099565.1| fumarate reductase subunit C [Vi... 80.1 1e-13
gi|340001691|ref|YP_004732575.1| fumarate reductase complex subu... 80.1 1e-13
gi|24115511|ref|NP_710021.1| fumarate reductase subunit C [Shige... 79.7 1e-13
gi|218707768|ref|YP_002415287.1| fumarate reductase subunit C [E... 79.7 1e-13
gi|27364668|ref|NP_760196.1| fumarate reductase subunit C [Vibri... 79.3 2e-13
gi|288550497|ref|ZP_05970676.2| fumarate reductase subunit C [En... 79.3 2e-13
gi|156932387|ref|YP_001436303.1| fumarate reductase subunit C [C... 79.3 2e-13
gi|212710997|ref|ZP_03319125.1| hypothetical protein PROVALCAL_0... 79.0 2e-13
gi|343498954|ref|ZP_08736959.1| fumarate reductase subunit C [Vi... 79.0 2e-13
gi|82546602|ref|YP_410549.1| fumarate reductase subunit C [Shige... 79.0 2e-13
gi|146310006|ref|YP_001175080.1| fumarate reductase subunit C [E... 79.0 2e-13
gi|262393009|ref|YP_003284863.1| fumarate reductase subunit C [V... 79.0 2e-13
gi|82779425|ref|YP_405774.1| fumarate reductase subunit C [Shige... 79.0 2e-13
gi|343509479|ref|ZP_08746751.1| fumarate reductase subunit C [Vi... 79.0 2e-13
gi|254508175|ref|ZP_05120300.1| fumarate reductase subunit C [Vi... 79.0 2e-13
gi|149192247|ref|ZP_01870461.1| fumarate reductase subunit C [Vi... 79.0 3e-13
gi|332761867|gb|EGJ92141.1| fumarate reductase subunit C [Shigel... 78.6 3e-13
gi|283834774|ref|ZP_06354515.1| fumarate reductase subunit C [Ci... 78.6 3e-13
gi|324112248|gb|EGC06226.1| fumarate reductase subunit C [Escher... 78.6 3e-13
gi|260779589|ref|ZP_05888479.1| fumarate reductase subunit C [Vi... 78.6 3e-13
gi|269103622|ref|ZP_06156319.1| fumarate reductase subunit C [Ph... 78.2 3e-13
gi|15804746|ref|NP_290787.1| fumarate reductase subunit C [Esche... 78.2 4e-13
gi|20150750|pdb|1KF6|C Chain C, E. Coli Quinol-Fumarate Reductas... 78.2 4e-13
gi|333955627|gb|EGL73365.1| fumarate reductase subunit C [Cronob... 77.8 5e-13
gi|260599495|ref|YP_003212066.1| fumarate reductase subunit C [C... 77.8 5e-13
gi|261344990|ref|ZP_05972634.1| fumarate reductase subunit C [Pr... 77.8 5e-13
gi|194434727|ref|ZP_03066979.1| fumarate reductase, cytochrome b... 77.4 6e-13
gi|260772048|ref|ZP_05880965.1| fumarate reductase subunit C [Vi... 77.4 6e-13
gi|261254137|ref|ZP_05946710.1| fumarate reductase subunit C [Vi... 77.4 7e-13
>gi|31792738|ref|NP_855231.1| fumarate reductase iron-sulfur subunit FrdB/membrane anchor subunit
FrdC [Mycobacterium bovis AF2122/97]
gi|31618328|emb|CAD96246.1| PROBABLE FUMARATE REDUCTASE [IRON-SULFUR SUBUNIT] FRDB and [MEMBRANE
ANCHOR SUBUNIT] FRDC (FUMARATE DEHYDROGENASE) (FUMARIC
HYDROGENASE) [Mycobacterium bovis AF2122/97]
Length=374
Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS 60
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYL+LVLRAVGAGGNSYQRFLDFS
Sbjct 249 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFS 308
Query 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV
Sbjct 309 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 368
Query 121 AWMVLS 126
AWMVLS
Sbjct 369 AWMVLS 374
>gi|121637474|ref|YP_977697.1| fumarate reductase frdC [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121493121|emb|CAL71592.1| Probable fumarate reductase [iron-sulfur subunit] frdB and [membrane
anchor subunit] frdC [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|341601492|emb|CCC64165.1| probable fumarate reductase [iron-sulfur subunit] frdB and [membrane
anchor subunit] frdC [Mycobacterium bovis BCG str. Moreau
RDJ]
Length=376
Score = 247 bits (631), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS 60
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYL+LVLRAVGAGGNSYQRFLDFS
Sbjct 251 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFS 310
Query 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV
Sbjct 311 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 370
Query 121 AWMVLS 126
AWMVLS
Sbjct 371 AWMVLS 376
>gi|15608692|ref|NP_216070.1| fumarate reductase subunit C [Mycobacterium tuberculosis H37Rv]
gi|148661350|ref|YP_001282873.1| fumarate reductase subunit C [Mycobacterium tuberculosis H37Ra]
gi|167968109|ref|ZP_02550386.1| putative fumarate reductase [iron-sulfur subunit] frdB and [Mycobacterium
tuberculosis H37Ra]
6 more sequence titles
Length=126
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS 60
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS
Sbjct 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS 60
Query 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV
Sbjct 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
Query 121 AWMVLS 126
AWMVLS
Sbjct 121 AWMVLS 126
>gi|15841021|ref|NP_336058.1| fumarate reductase subunit C [Mycobacterium tuberculosis CDC1551]
gi|148822777|ref|YP_001287531.1| fumarate reductase subunit C [Mycobacterium tuberculosis F11]
gi|253799392|ref|YP_003032393.1| fumarate reductase membrane anchor subunit frdC [Mycobacterium
tuberculosis KZN 1435]
56 more sequence titles
Length=126
Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS 60
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYL+LVLRAVGAGGNSYQRFLDFS
Sbjct 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFS 60
Query 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV
Sbjct 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
Query 121 AWMVLS 126
AWMVLS
Sbjct 121 AWMVLS 126
>gi|339294529|gb|AEJ46640.1| fumarate reductase frdC [Mycobacterium tuberculosis CCDC5079]
gi|339298165|gb|AEJ50275.1| fumarate reductase frdC [Mycobacterium tuberculosis CCDC5180]
Length=130
Score = 243 bits (619), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS 60
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYL+LVLRAVGAGGNSYQRFLDFS
Sbjct 5 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFS 64
Query 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV
Sbjct 65 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 124
Query 121 AWMVLS 126
AWMVLS
Sbjct 125 AWMVLS 130
>gi|289753640|ref|ZP_06513018.1| fumarate reductase subunit C [Mycobacterium tuberculosis EAS054]
gi|289694227|gb|EFD61656.1| fumarate reductase subunit C [Mycobacterium tuberculosis EAS054]
Length=126
Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/126 (99%), Positives = 125/126 (99%), Gaps = 0/126 (0%)
Query 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS 60
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYL+LVLRAVG GGNSYQRFLDFS
Sbjct 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGTGGNSYQRFLDFS 60
Query 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV
Sbjct 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
Query 121 AWMVLS 126
AWMVLS
Sbjct 121 AWMVLS 126
>gi|254231781|ref|ZP_04925108.1| fumarate reductase [membrane anchor subunit] frdC [Mycobacterium
tuberculosis C]
gi|124600840|gb|EAY59850.1| fumarate reductase [membrane anchor subunit] frdC [Mycobacterium
tuberculosis C]
Length=126
Score = 240 bits (612), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/126 (99%), Positives = 125/126 (99%), Gaps = 0/126 (0%)
Query 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS 60
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYL+LVLRAVGA GNSYQRFLDFS
Sbjct 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGARGNSYQRFLDFS 60
Query 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV
Sbjct 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
Query 121 AWMVLS 126
AWMVLS
Sbjct 121 AWMVLS 126
>gi|340626574|ref|YP_004745026.1| putative fumarate reductase [membrane anchor subunit] FRDC [Mycobacterium
canettii CIPT 140010059]
gi|340004764|emb|CCC43908.1| putative fumarate reductase [membrane anchor subunit] FRDC (fumarate
dehydrogenase) (fumaric hydrogenase) [Mycobacterium
canettii CIPT 140010059]
Length=126
Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/126 (97%), Positives = 123/126 (98%), Gaps = 0/126 (0%)
Query 1 MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFS 60
M+AYRQPVERYWWARRRSYL FMLREISCIFVAWFVLYL+LVLRAVGAGGNSYQRFLDFS
Sbjct 1 MTAYRQPVERYWWARRRSYLLFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFS 60
Query 61 ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
ANPVVVVLNVVALS LLLHAVTWFGSAPRAMVIQVRGRRVPARAV AGHYAAWLVVSVIV
Sbjct 61 ANPVVVVLNVVALSSLLLHAVTWFGSAPRAMVIQVRGRRVPARAVRAGHYAAWLVVSVIV 120
Query 121 AWMVLS 126
AWMVLS
Sbjct 121 AWMVLS 126
>gi|224989949|ref|YP_002644636.1| putative fumarate reductase [Mycobacterium bovis BCG str. Tokyo
172]
gi|224773062|dbj|BAH25868.1| putative fumarate reductase [Mycobacterium bovis BCG str. Tokyo
172]
Length=104
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/104 (99%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 23 MLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSANPVVVVLNVVALSFLLLHAVT 82
MLREISCIFVAWFVLYL+LVLRAVGAGGNSYQRFLDFSANPVVVVLNVVALSFLLLHAVT
Sbjct 1 MLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFSANPVVVVLNVVALSFLLLHAVT 60
Query 83 WFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVAWMVLS 126
WFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVAWMVLS
Sbjct 61 WFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVAWMVLS 104
>gi|333920624|ref|YP_004494205.1| Fumarate reductase subunit C [Amycolicicoccus subflavus DQS3-9A1]
gi|333482845|gb|AEF41405.1| Fumarate reductase subunit C [Amycolicicoccus subflavus DQS3-9A1]
Length=132
Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/124 (49%), Positives = 92/124 (75%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
S YR + WW +RR+Y F +RE+SC+FVAWFV ++++++ AVG G Y+ FLD +
Sbjct 8 SQYRPSLPLLWWTKRRTYFVFAMRELSCVFVAWFVAFMVMLIHAVGQGPARYEDFLDLAG 67
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
P VVV+N++AL+FL++HAVTWF AP+AMV++ ++VP A++ H+A WL++S+IV
Sbjct 68 RPWVVVINILALAFLIVHAVTWFQLAPKAMVVKAGRQQVPPAAIMGAHFAGWLIISLIVM 127
Query 122 WMVL 125
W+VL
Sbjct 128 WVVL 131
>gi|90407177|ref|ZP_01215365.1| putative fumarate reductase [Psychromonas sp. CNPT3]
gi|90311753|gb|EAS39850.1| putative fumarate reductase [Psychromonas sp. CNPT3]
Length=129
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 71/116 (62%), Gaps = 0/116 (0%)
Query 4 YRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSANP 63
Y +E WW + R Y +MLRE S +F+ ++ L L L + ++ +LD NP
Sbjct 7 YTYQIETNWWLKSRFYTMYMLREGSSVFITFYSLVLTWGLLCLSRSEAAFNSWLDTLQNP 66
Query 64 VVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVI 119
+ + L+++ L F L H++TWF AP+AM + ++GRR+ ++A HYAA++V+SV+
Sbjct 67 LFIALHLIVLIFALYHSITWFALAPKAMALWIKGRRLEDNVIVATHYAAFVVISVL 122
>gi|334123793|ref|ZP_08497811.1| fumarate reductase subunit C [Enterobacter hormaechei ATCC 49162]
gi|333390118|gb|EGK61267.1| fumarate reductase subunit C [Enterobacter hormaechei ATCC 49162]
Length=132
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/119 (38%), Positives = 69/119 (58%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
AY +P+ WW + Y +MLRE + + WF L LM + A+ G ++ F+ F
Sbjct 7 KAYVRPMPSTWWKKLPFYRFYMLREGTAVPAVWFSLELMYGVYALKHGPEAWASFVSFLQ 66
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NP++VVLN++ L+ LLH TWF AP+A I V+G ++ V+ G +A VVSV++
Sbjct 67 NPIIVVLNLIVLAAALLHTKTWFELAPKAANIIVKGEKMGPEPVIKGLWAVTAVVSVVI 125
>gi|296100925|ref|YP_003611071.1| fumarate reductase subunit C [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055384|gb|ADF60122.1| fumarate reductase subunit C [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length=131
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/124 (37%), Positives = 72/124 (59%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
AY +P+ WW + Y +MLRE + + WF L LM + A+ G ++ F+ F
Sbjct 6 KAYVRPMPSTWWKKLPFYRFYMLREGTAVPAVWFSLELMYGVFALKHGPETWASFVGFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NP++V+LN++ L+ LLH TWF AP+A I V+G ++ V+ G +A VVSV++
Sbjct 66 NPIIVILNLIVLAAALLHTKTWFELAPKAANIIVKGEKMGPEPVIKGLWAVTAVVSVVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|295098314|emb|CBK87404.1| Fumarate reductase subunit C [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length=132
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/124 (37%), Positives = 72/124 (59%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
AY +P+ WW + Y +MLRE + + WF L L+ + A+ G ++ F+ F
Sbjct 7 KAYVRPMPSTWWKKLPFYRFYMLREGTAVPAVWFSLELLYGVYALKHGPEAWASFVGFLQ 66
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NP++VVLN++ L+ LLH TWF AP+A I V+G ++ V+ G +A VVSV++
Sbjct 67 NPIIVVLNLIVLAAALLHTKTWFELAPKAANIIVKGEKMGPEPVIKGLWAVTAVVSVVIL 126
Query 122 WMVL 125
++ L
Sbjct 127 FVAL 130
>gi|345297557|ref|YP_004826915.1| Fumarate reductase subunit C [Enterobacter asburiae LF7a]
gi|345091494|gb|AEN63130.1| Fumarate reductase subunit C [Enterobacter asburiae LF7a]
Length=131
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/124 (35%), Positives = 71/124 (58%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
AY +P+ WW Y +MLRE + + WF + LM + A+ G ++ F+ F
Sbjct 6 KAYVRPMPSTWWKNLPFYRFYMLREGTAVPAVWFSIELMYGVFALKHGPETWANFVGFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NP+VV+LN++ L+ LLH TWF AP+A I V+G ++ V+ G +A +V+V++
Sbjct 66 NPIVVILNLIVLAAALLHTKTWFELAPKAANIIVKGEKMGPEPVIKGLWAVTAIVTVVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|149909944|ref|ZP_01898593.1| fumarate reductase subunit C [Moritella sp. PE36]
gi|149806958|gb|EDM66917.1| fumarate reductase subunit C [Moritella sp. PE36]
Length=129
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/115 (34%), Positives = 70/115 (61%), Gaps = 0/115 (0%)
Query 4 YRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSANP 63
Y + + WW ++ Y ++MLRE S +F+ + L L L + G ++ +L NP
Sbjct 7 YTRELPTDWWMKQLFYTKYMLREGSSVFITIYSLILAWGLLRLSQGEVAFNAWLASLQNP 66
Query 64 VVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSV 118
V V+ +++AL+F L H VTWF AP+A+ + ++G+R+ + +++GHYAA+ +V
Sbjct 67 VAVIFHLIALAFALYHTVTWFSLAPKAVDLWIKGKRLDDKVIVSGHYAAFAAATV 121
>gi|336248333|ref|YP_004592043.1| fumarate reductase subunit C [Enterobacter aerogenes KCTC 2190]
gi|334734389|gb|AEG96764.1| fumarate reductase subunit C [Enterobacter aerogenes KCTC 2190]
Length=131
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/124 (34%), Positives = 72/124 (59%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G S++ ++ F
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPTVWFSIVLIYGLFALKHGAESWEGYVAFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NP+VV+LN++ L+ LLH TWF AP+A I V+G ++ ++ G +A +VS+++
Sbjct 66 NPIVVILNLITLAAALLHTKTWFELAPKAANIIVKGEKMGPEPLIKGLWAVTALVSIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|170766843|ref|ZP_02901296.1| fumarate reductase, cytochrome b subunit [Escherichia albertii
TW07627]
gi|170124281|gb|EDS93212.1| fumarate reductase, cytochrome b subunit [Escherichia albertii
TW07627]
Length=131
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/124 (32%), Positives = 71/124 (58%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G ++ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ LLH TWF AP+A I V+ ++ ++ G +A +V ++++
Sbjct 66 NPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKGLWAVTVVATIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|323498093|ref|ZP_08103097.1| fumarate reductase subunit C [Vibrio sinaloensis DSM 21326]
gi|323316804|gb|EGA69811.1| fumarate reductase subunit C [Vibrio sinaloensis DSM 21326]
Length=127
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/119 (37%), Positives = 71/119 (60%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + V+R WW Y +MLRE + + + F L+L L ++ G ++Q +L F A
Sbjct 5 KPYVREVKRTWWKNHPFYRFYMLREATVLPLILFTLFLTFGLGSLVKGPEAWQTWLGFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NPVV+ +N+VAL+ LLHA T+F P+ M I+++G+ V R ++ +AA +S+IV
Sbjct 65 NPVVIAINIVALAGSLLHAQTFFSMMPQVMPIRLKGKPVDKRVIVLTQWAAVAFISLIV 123
>gi|237729090|ref|ZP_04559571.1| FrdC [Citrobacter sp. 30_2]
gi|33358376|gb|AAQ16663.1| FrdC [Escherichia coli]
gi|226908819|gb|EEH94737.1| FrdC [Citrobacter sp. 30_2]
Length=131
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/107 (38%), Positives = 62/107 (58%), Gaps = 0/107 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
AY +P+ WW + Y +MLRE + + WF + L++ L A+ G S+ F+ F
Sbjct 6 KAYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIIGLFALKHGAESWMGFVAFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAG 108
NPVVV+LN++AL+ LLH TWF AP+A I V+ ++ ++ G
Sbjct 66 NPVVVILNIIALAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKG 112
>gi|300715026|ref|YP_003739829.1| Fumarate reductase, cytochrome b subunit [Erwinia billingiae
Eb661]
gi|299060862|emb|CAX57969.1| Fumarate reductase, cytochrome b subunit [Erwinia billingiae
Eb661]
Length=135
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/124 (36%), Positives = 74/124 (60%), Gaps = 4/124 (3%)
Query 1 MSAYRQPVER----YWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRF 56
M+ R+P R WW + Y +MLRE + + WF L ++ L A+ G S+Q F
Sbjct 1 MTTKRKPFHRPMTANWWQKSGYYRFYMLREATALPALWFSLEMIFGLFALKNGEQSWQAF 60
Query 57 LDFSANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVV 116
+ +P+++++N+VAL+ LLH+ TWF AP+A VI + G+++ V+ G + A +VV
Sbjct 61 VAVLQHPIMLLINIVALAAALLHSKTWFELAPKAQVIVLGGKKMSPAPVIKGLWLAMVVV 120
Query 117 SVIV 120
S+I+
Sbjct 121 SLIL 124
>gi|323494459|ref|ZP_08099565.1| fumarate reductase subunit C [Vibrio brasiliensis LMG 20546]
gi|323311282|gb|EGA64440.1| fumarate reductase subunit C [Vibrio brasiliensis LMG 20546]
Length=127
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/119 (37%), Positives = 72/119 (61%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + V+R WW Y +MLRE + + + F ++L L ++ G ++Q +L+F A
Sbjct 5 KPYVREVKRTWWKDHPFYRFYMLREATVLPLILFTIFLTFGLGSLVKGPEAWQTWLEFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NPVVV +N+VAL+ LLHA T+F P+ M I+++G+ V + ++ +AA +S+IV
Sbjct 65 NPVVVAINIVALAGSLLHAQTFFSMMPQVMPIRLKGKPVDKKIIVLTQWAAVAFISLIV 123
>gi|340001691|ref|YP_004732575.1| fumarate reductase complex subunit C; membrane anchor polypeptide
[Salmonella bongori NCTC 12419]
gi|339515053|emb|CCC32831.1| fumarate reductase complex subunit C; membrane anchor polypeptide
[Salmonella bongori NCTC 12419]
Length=131
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/107 (37%), Positives = 60/107 (57%), Gaps = 0/107 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G S+ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKHGAESWMGFVDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAG 108
NPVVV+LN++ L+ LLH TWF AP+A I V+ ++ ++ G
Sbjct 66 NPVVVILNLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKG 112
>gi|24115511|ref|NP_710021.1| fumarate reductase subunit C [Shigella flexneri 2a str. 301]
gi|30065529|ref|NP_839700.1| fumarate reductase subunit C [Shigella flexneri 2a str. 2457T]
gi|34582299|sp|Q83P38.1|FRDC_SHIFL RecName: Full=Fumarate reductase subunit C; AltName: Full=Fumarate
reductase 15 kDa hydrophobic protein
gi|24054836|gb|AAN45728.1| fumarate reductase, anaerobic, membrane anchor polypeptide [Shigella
flexneri 2a str. 301]
gi|30043793|gb|AAP19512.1| fumarate reductase, anaerobic, membrane anchor polypeptide [Shigella
flexneri 2a str. 2457T]
gi|281603619|gb|ADA76603.1| Fumarate reductase subunit C [Shigella flexneri 2002017]
gi|333011934|gb|EGK31319.1| fumarate reductase subunit C [Shigella flexneri K-304]
Length=131
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 70/124 (57%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G ++ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFALFALKNGPEAWAGFVDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ LLH TWF AP+A I V+ ++ ++ +A +V ++++
Sbjct 66 NPVIVIINLITLTAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|218707768|ref|YP_002415287.1| fumarate reductase subunit C [Escherichia coli UMN026]
gi|293402784|ref|ZP_06646881.1| fumarate reductase subunit C [Escherichia coli FVEC1412]
gi|293407881|ref|ZP_06651721.1| fumarate reductase subunit C [Escherichia coli B354]
8 more sequence titles
Length=131
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/124 (32%), Positives = 70/124 (57%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G S+ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPESWAGFVDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ LLH TWF AP+A I V+ ++ ++ +A +V ++++
Sbjct 66 NPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|27364668|ref|NP_760196.1| fumarate reductase subunit C [Vibrio vulnificus CMCP6]
gi|37681283|ref|NP_935892.1| fumarate reductase subunit C [Vibrio vulnificus YJ016]
gi|320155063|ref|YP_004187442.1| fumarate reductase subunit C [Vibrio vulnificus MO6-24/O]
gi|34582309|sp|Q8DCX3.1|FRDC_VIBVU RecName: Full=Fumarate reductase subunit C
gi|41017098|sp|Q7MGX5.1|FRDC_VIBVY RecName: Full=Fumarate reductase subunit C
gi|27360813|gb|AAO09723.1| Fumarate reductase subunit C [Vibrio vulnificus CMCP6]
gi|37200034|dbj|BAC95863.1| fumarate reductase subunit C [Vibrio vulnificus YJ016]
gi|319930375|gb|ADV85239.1| fumarate reductase subunit C [Vibrio vulnificus MO6-24/O]
Length=127
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/119 (37%), Positives = 72/119 (61%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + V+R WW Y +MLRE + + + F L+L + L ++ G ++Q +L+F A
Sbjct 5 KPYVREVKRTWWKDHPFYRFYMLREATVLPLILFTLFLTVGLGSLVKGPEAWQTWLNFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NPVV+ +N+VAL LLHA T+F P+ M I+++G+ V + ++ +AA +S+IV
Sbjct 65 NPVVIAINIVALLGSLLHAHTFFSMMPQVMPIRLKGKPVDKKIIVLAQWAAVAFISLIV 123
>gi|288550497|ref|ZP_05970676.2| fumarate reductase subunit C [Enterobacter cancerogenus ATCC
35316]
gi|288314860|gb|EFC53798.1| fumarate reductase subunit C [Enterobacter cancerogenus ATCC
35316]
Length=132
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/107 (38%), Positives = 61/107 (58%), Gaps = 0/107 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
AY +P+ WW + Y +MLRE + + WF L L+ + A+ G S+ F+ F
Sbjct 7 KAYVRPMPSTWWKKLPFYRFYMLREGTAVPAVWFSLELIYGIFALKHGPESWASFVGFLQ 66
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAG 108
NP++VVLN++ L+ LLH TWF AP+A I V+G ++ V+ G
Sbjct 67 NPIIVVLNLIVLAAALLHTKTWFELAPKAANIIVKGEKMGPEPVIKG 113
>gi|156932387|ref|YP_001436303.1| fumarate reductase subunit C [Cronobacter sakazakii ATCC BAA-894]
gi|156530641|gb|ABU75467.1| hypothetical protein ESA_00163 [Cronobacter sakazakii ATCC BAA-894]
Length=132
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/129 (35%), Positives = 74/129 (58%), Gaps = 4/129 (3%)
Query 1 MSAYRQP----VERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRF 56
M++ R+P +E WW + Y +MLRE + + WF L L+ L A+ G S+ F
Sbjct 2 MTSKRKPYVRTMETGWWKQLPFYRFYMLREGTSVPAVWFSLVLIYGLFALKHGPESWAGF 61
Query 57 LDFSANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVV 116
+ F NPVVV+LN++ L LLH TWF AP+A ++ V+ ++ V+ G + ++V
Sbjct 62 VGFLQNPVVVLLNIITLLAALLHTKTWFELAPKAAIVVVKDEKMGPEPVIRGLWGVTVLV 121
Query 117 SVIVAWMVL 125
++IV ++ L
Sbjct 122 TIIVLFIAL 130
>gi|212710997|ref|ZP_03319125.1| hypothetical protein PROVALCAL_02066 [Providencia alcalifaciens
DSM 30120]
gi|212686165|gb|EEB45693.1| hypothetical protein PROVALCAL_02066 [Providencia alcalifaciens
DSM 30120]
Length=131
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/121 (31%), Positives = 71/121 (59%), Gaps = 4/121 (3%)
Query 1 MSAYRQPVERY----WWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRF 56
M+ R+P R WW + Y +++RE + + WF + ++ + A+ G S+ F
Sbjct 1 MTTKRKPYVREMKGDWWQKLGFYRFYIMRESTSVLQVWFSILVLYGVFALKNGPESWAGF 60
Query 57 LDFSANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVV 116
+ F +NP+++++N+V L+ LLH TWF AP+A+ I V+ +++P ++ G +A +VV
Sbjct 61 VGFLSNPIILIINIVTLAATLLHTTTWFKLAPKAVAIIVKDKKLPDEPIVKGFWALTIVV 120
Query 117 S 117
+
Sbjct 121 T 121
>gi|343498954|ref|ZP_08736959.1| fumarate reductase subunit C [Vibrio tubiashii ATCC 19109]
gi|342823593|gb|EGU58205.1| fumarate reductase subunit C [Vibrio tubiashii ATCC 19109]
Length=127
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/119 (37%), Positives = 72/119 (61%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + V+R WW Y +MLRE + + + F ++L L ++ G ++Q +L+F A
Sbjct 5 KPYVREVKRTWWKDHPFYRFYMLREATVLPLILFTVFLTFGLGSLVKGPEAWQGWLEFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NPVVV +N+VAL+ LLHA T+F P+ M I+++G+ V + ++ +AA +S+IV
Sbjct 65 NPVVVAINIVALAGSLLHAQTFFSMMPQVMPIRLKGKPVDKKIIVLTQWAAVAFISLIV 123
>gi|82546602|ref|YP_410549.1| fumarate reductase subunit C [Shigella boydii Sb227]
gi|123557907|sp|Q31T87.1|FRDC_SHIBS RecName: Full=Fumarate reductase subunit C; AltName: Full=Fumarate
reductase 15 kDa hydrophobic protein
gi|81248013|gb|ABB68721.1| fumarate reductase, anaerobic, membrane anchor polypeptide [Shigella
boydii Sb227]
gi|320187546|gb|EFW62230.1| Fumarate reductase subunit C [Shigella flexneri CDC 796-83]
Length=131
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 71/124 (58%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G +++ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPDAWAGFVDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ LLH TWF AP+A I V+ ++ ++ +A +V ++++
Sbjct 66 NPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|146310006|ref|YP_001175080.1| fumarate reductase subunit C [Enterobacter sp. 638]
gi|166988468|sp|A4W5P9.1|FRDC_ENT38 RecName: Full=Fumarate reductase subunit C; AltName: Full=Fumarate
reductase 15 kDa hydrophobic protein
gi|145316882|gb|ABP59029.1| fumarate reductase, subunit C [Enterobacter sp. 638]
Length=131
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/107 (38%), Positives = 61/107 (58%), Gaps = 0/107 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
AY +P+ WW + Y +MLRE + + WF L LM + A+ G ++ F+ F
Sbjct 6 KAYVRPMPSTWWKKLPFYRFYMLREGTAVPAVWFSLELMYGVFALKHGPETWADFVGFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAG 108
NPVV++LN++ L+ LLH TWF AP+A I V+G ++ V+ G
Sbjct 66 NPVVLILNLIVLAAALLHTKTWFELAPKAANIIVKGEKMGPEPVIKG 112
>gi|262393009|ref|YP_003284863.1| fumarate reductase subunit C [Vibrio sp. Ex25]
gi|262336603|gb|ACY50398.1| fumarate reductase subunit C [Vibrio sp. Ex25]
Length=127
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/119 (37%), Positives = 69/119 (58%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + V+R WW Y +MLRE + + + F L+L L + G ++Q +LDF A
Sbjct 5 KPYVREVKRTWWKNHPFYRFYMLREATVLPLVLFTLFLTFGLGCLVKGPEAWQGWLDFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NP+VV +N+VAL L HA T+F P+ M I+++G+ V + ++ +AA +S+IV
Sbjct 65 NPIVVAINIVALLGSLFHAQTFFSMMPQVMPIRLKGKLVDKKIIVLTQWAAVAFISLIV 123
>gi|82779425|ref|YP_405774.1| fumarate reductase subunit C [Shigella dysenteriae Sd197]
gi|309787699|ref|ZP_07682310.1| fumarate reductase subunit C [Shigella dysenteriae 1617]
gi|123560960|sp|Q328H2.1|FRDC_SHIDS RecName: Full=Fumarate reductase subunit C; AltName: Full=Fumarate
reductase 15 kDa hydrophobic protein
gi|81243573|gb|ABB64283.1| fumarate reductase, anaerobic [Shigella dysenteriae Sd197]
gi|308924449|gb|EFP69945.1| fumarate reductase subunit C [Shigella dysenteriae 1617]
Length=131
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 70/124 (57%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G ++ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ LLH TWF AP+A I V+ ++ ++ +A +V ++++
Sbjct 66 NPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKIGPEPIIKSLWAVTVVATIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|343509479|ref|ZP_08746751.1| fumarate reductase subunit C [Vibrio scophthalmi LMG 19158]
gi|343515928|ref|ZP_08752976.1| fumarate reductase subunit C [Vibrio sp. N418]
gi|342797563|gb|EGU33211.1| fumarate reductase subunit C [Vibrio sp. N418]
gi|342804494|gb|EGU39811.1| fumarate reductase subunit C [Vibrio scophthalmi LMG 19158]
Length=127
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/119 (34%), Positives = 73/119 (62%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + ++R WW Y +M+RE + + + F ++L + L ++ G ++Q +LDF A
Sbjct 5 KPYVREMKRTWWQSSPFYRFYMMREATVLPLILFTVFLTIGLGSLVKGPEAWQTWLDFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NP+VV +N+VAL+ LLHA T+F P+ M I+++G+ V + ++ +AA +S++V
Sbjct 65 NPLVVAINIVALAGSLLHAQTFFSMMPQVMPIRIKGKPVDKKLIVLAQWAAVAFISLVV 123
>gi|254508175|ref|ZP_05120300.1| fumarate reductase subunit C [Vibrio parahaemolyticus 16]
gi|219548897|gb|EED25897.1| fumarate reductase subunit C [Vibrio parahaemolyticus 16]
Length=127
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/119 (37%), Positives = 70/119 (59%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + V+R WW Y +MLRE + + + F L+L L A+ G ++Q +L F A
Sbjct 5 KPYVREVKRTWWKDHPFYRFYMLREATVLPLVLFTLFLTFGLGALVKGPEAWQTWLGFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NPVVV +N+VAL LLHA T+F P+ M I+++G+ V + ++ +AA +S++V
Sbjct 65 NPVVVAINIVALLGSLLHAQTFFSMMPQVMPIRLKGKPVDKKIIVLTQWAAVAFISLVV 123
>gi|149192247|ref|ZP_01870461.1| fumarate reductase subunit C [Vibrio shilonii AK1]
gi|148833920|gb|EDL50943.1| fumarate reductase subunit C [Vibrio shilonii AK1]
Length=127
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/119 (33%), Positives = 71/119 (60%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + ++R WW Y +MLRE + + + F ++L L A+ G ++Q +L+F A
Sbjct 5 KPYVREIKRTWWKNHPFYRFYMLREATVLPLILFTIFLTFGLGALVKGPEAWQGWLEFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NP+V+ +N+VAL+ L HA T+F P+ M I+++G+ V + ++ +AA +S++V
Sbjct 65 NPIVIAINIVALAGSLFHAQTFFSMMPQVMPIKLKGKLVEKKTIVLTQWAAVAAISLVV 123
>gi|332761867|gb|EGJ92141.1| fumarate reductase subunit C [Shigella flexneri 2747-71]
gi|333009241|gb|EGK28697.1| fumarate reductase subunit C [Shigella flexneri K-218]
gi|333011138|gb|EGK30552.1| fumarate reductase subunit C [Shigella flexneri K-272]
gi|333012668|gb|EGK32048.1| fumarate reductase subunit C [Shigella flexneri K-227]
Length=131
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 70/124 (57%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G ++ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ LLH TWF AP+A I V+ ++ ++ +A +V ++++
Sbjct 66 NPVIVIINLITLTAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|283834774|ref|ZP_06354515.1| fumarate reductase subunit C [Citrobacter youngae ATCC 29220]
gi|291069019|gb|EFE07128.1| fumarate reductase subunit C [Citrobacter youngae ATCC 29220]
Length=131
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/107 (38%), Positives = 62/107 (58%), Gaps = 0/107 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
+AY +P+ WW + Y +MLRE + + WF + L+ L A+ G S+ F+ F
Sbjct 6 NAYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKHGVESWAGFVGFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAG 108
NPVVV+LN++AL+ LLH TWF AP+A I V+ ++ ++ G
Sbjct 66 NPVVVILNIIALAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKG 112
>gi|324112248|gb|EGC06226.1| fumarate reductase subunit C [Escherichia fergusonii B253]
Length=131
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 70/124 (57%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G ++ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFIDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ LLH TWF AP+A I V+ ++ ++ +A +V ++++
Sbjct 66 NPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|260779589|ref|ZP_05888479.1| fumarate reductase subunit C [Vibrio coralliilyticus ATCC BAA-450]
gi|260604398|gb|EEX30702.1| fumarate reductase subunit C [Vibrio coralliilyticus ATCC BAA-450]
Length=127
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/119 (36%), Positives = 72/119 (61%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + V+R WW Y +MLRE + + + F L+L + L ++ G ++Q +L+F A
Sbjct 5 KPYVREVKRTWWKDHPFYRFYMLREATVLPLVLFTLFLTVGLGSLVKGPEAWQGWLEFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NPVV+ +N+VAL LLHA T+F P+ M I+++G+ V + ++ +AA +S++V
Sbjct 65 NPVVIAINIVALLGSLLHAQTFFSMMPQVMPIRLKGKPVDKKIIVLTQWAAVAFISLVV 123
>gi|269103622|ref|ZP_06156319.1| fumarate reductase subunit C [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163520|gb|EEZ42016.1| fumarate reductase subunit C [Photobacterium damselae subsp.
damselae CIP 102761]
Length=127
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/109 (33%), Positives = 66/109 (61%), Gaps = 0/109 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + ++R WW Y +M+RE + + + +F + L L ++ G ++Q +LDF A
Sbjct 5 KPYVREMKRTWWKDSSFYRFYMIREATILPLIFFTICLTFGLGSLVKGPEAWQSWLDFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHY 110
NP+V++LN++AL+ L HA T+F P+ M IQ++G++V + ++ +
Sbjct 65 NPIVILLNILALAGSLFHAFTYFNMMPQVMPIQIKGKKVDKKIIILAQW 113
>gi|15804746|ref|NP_290787.1| fumarate reductase subunit C [Escherichia coli O157:H7 EDL933]
gi|15834387|ref|NP_313160.1| fumarate reductase subunit C [Escherichia coli O157:H7 str. Sakai]
gi|16131977|ref|NP_418576.1| fumarate reductase (anaerobic), membrane anchor subunit [Escherichia
coli str. K-12 substr. MG1655]
218 more sequence titles
Length=131
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 70/124 (57%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G ++ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ LLH TWF AP+A I V+ ++ ++ +A +V ++++
Sbjct 66 NPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|20150750|pdb|1KF6|C Chain C, E. Coli Quinol-Fumarate Reductase With Bound Inhibitor
Hqno
gi|20150754|pdb|1KF6|O Chain O, E. Coli Quinol-Fumarate Reductase With Bound Inhibitor
Hqno
gi|20150762|pdb|1KFY|C Chain C, Quinol-Fumarate Reductase With Quinol Inhibitor 2-[1-(4-
Chloro-Phenyl)-Ethyl]-4,6-Dinitro-Phenol
15 more sequence titles
Length=130
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 70/124 (57%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G ++ F+DF
Sbjct 5 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQ 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ LLH TWF AP+A I V+ ++ ++ +A +V ++++
Sbjct 65 NPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVIL 124
Query 122 WMVL 125
++ L
Sbjct 125 FVAL 128
>gi|333955627|gb|EGL73365.1| fumarate reductase subunit C [Cronobacter sakazakii E899]
Length=131
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/129 (35%), Positives = 73/129 (57%), Gaps = 4/129 (3%)
Query 1 MSAYRQP----VERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRF 56
M++ R+P +E WW + Y +MLRE + + WF + L+ L A+ G S+ F
Sbjct 1 MTSKRKPYVRTMETGWWKQLPFYRFYMLREGTSVPAVWFSIVLIYGLFALKHGSESWAGF 60
Query 57 LDFSANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVV 116
+ F NPVVV+LN++ L LLH TWF AP+A ++ V+ ++ V+ G + +V
Sbjct 61 VGFLQNPVVVLLNIITLLAALLHTKTWFELAPKAAIVVVKDEKMGPEPVIRGLWGVTALV 120
Query 117 SVIVAWMVL 125
++IV ++ L
Sbjct 121 TIIVLFIAL 129
>gi|260599495|ref|YP_003212066.1| fumarate reductase subunit C [Cronobacter turicensis z3032]
gi|260218672|emb|CBA34015.1| Fumarate reductase subunit C [Cronobacter turicensis z3032]
Length=131
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/130 (34%), Positives = 74/130 (57%), Gaps = 4/130 (3%)
Query 1 MSAYRQP----VERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRF 56
M++ R+P +E WW + Y +MLRE + + WF + L+ L A+ G S+ F
Sbjct 1 MTSKRKPYVRTMESGWWKQLPFYRFYMLREGTSVPAVWFSIVLIYGLFALKHGPESWAGF 60
Query 57 LDFSANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVV 116
+ F NPVVV+LN++ L LLH TWF AP+A ++ V+ ++ V+ G + +V
Sbjct 61 VGFLQNPVVVLLNIITLLAALLHTKTWFELAPKAAIVVVKDEKMGPEPVIRGLWGVTAIV 120
Query 117 SVIVAWMVLS 126
+++V ++ L+
Sbjct 121 TIVVLFIALA 130
>gi|261344990|ref|ZP_05972634.1| fumarate reductase subunit C [Providencia rustigianii DSM 4541]
gi|282567135|gb|EFB72670.1| fumarate reductase subunit C [Providencia rustigianii DSM 4541]
Length=131
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/121 (31%), Positives = 71/121 (59%), Gaps = 4/121 (3%)
Query 1 MSAYRQPVERY----WWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRF 56
M+ R+P R WW + Y +++RE + + WF + ++ + A+ +G S+ F
Sbjct 1 MTTKRKPYVREMKGDWWQKLGFYRFYIMRESTSVLQVWFSILVLYGVFALKSGPESWAGF 60
Query 57 LDFSANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVV 116
+ F +NP+++++N+V L+ LLH TWF AP+A+ I V+ ++P ++ G +A +VV
Sbjct 61 VGFLSNPIILIINLVTLAATLLHTTTWFKLAPKAVSIIVKDNKMPDEPIVKGFWALTIVV 120
Query 117 S 117
+
Sbjct 121 T 121
>gi|194434727|ref|ZP_03066979.1| fumarate reductase, cytochrome b subunit [Shigella dysenteriae
1012]
gi|194417008|gb|EDX33125.1| fumarate reductase, cytochrome b subunit [Shigella dysenteriae
1012]
Length=131
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/124 (30%), Positives = 70/124 (57%), Gaps = 0/124 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y +P+ WW + Y +MLRE + + WF + L+ L A+ G ++ F+DF
Sbjct 6 KPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQ 65
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVA 121
NPV+V++N++ L+ +LH TWF AP+A I V+ ++ ++ +A +V ++++
Sbjct 66 NPVIVIINLITLAAAMLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVIL 125
Query 122 WMVL 125
++ L
Sbjct 126 FVAL 129
>gi|260772048|ref|ZP_05880965.1| fumarate reductase subunit C [Vibrio metschnikovii CIP 69.14]
gi|260612915|gb|EEX38117.1| fumarate reductase subunit C [Vibrio metschnikovii CIP 69.14]
Length=127
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/119 (35%), Positives = 72/119 (61%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + + R WW Y +M+RE + + + F L+L + L ++ G ++Q +L F A
Sbjct 5 KPYVREMTRTWWKDDPFYRLYMVREATVLPLILFTLFLTIGLGSLVKGPEAWQSWLAFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NP+VV +N+VAL+ L HA T+FG P+ M I+++G+ + + ++ +AA V+S+IV
Sbjct 65 NPLVVAINIVALAGSLFHAHTFFGMMPQVMPIRIKGKLLDKKIIVLTQWAAVAVISLIV 123
>gi|261254137|ref|ZP_05946710.1| fumarate reductase subunit C [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260937528|gb|EEX93517.1| fumarate reductase subunit C [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815336|gb|EGU50257.1| fumarate reductase subunit C [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length=127
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/119 (36%), Positives = 71/119 (60%), Gaps = 0/119 (0%)
Query 2 SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLMLVLRAVGAGGNSYQRFLDFSA 61
Y + V+R WW Y +MLRE + + + F ++L L ++ G ++Q +L+F A
Sbjct 5 KPYVREVKRTWWKNHPFYRFYMLREATVLPLILFTIFLTFGLGSLVKGPEAWQGWLEFMA 64
Query 62 NPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV 120
NP+VV +N+VAL LLHA T+F P+ M I+++G+ V + ++ +AA +S+IV
Sbjct 65 NPLVVAINIVALLGSLLHAQTFFSMMPQVMPIRLKGKPVDKKIIVLTQWAAVAFISLIV 123
Lambda K H
0.334 0.140 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129836892488
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40