BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1560
Length=72
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608698|ref|NP_216076.1| hypothetical protein Rv1560 [Mycoba... 141 3e-32
gi|289761723|ref|ZP_06521101.1| conserved hypothetical protein [... 138 2e-31
gi|167967386|ref|ZP_02549663.1| hypothetical protein MtubH3_0485... 130 9e-29
gi|333989208|ref|YP_004521822.1| hypothetical protein JDM601_056... 114 3e-24
gi|297563900|ref|YP_003682873.1| Protein of unknown function DUF... 94.0 7e-18
gi|254231784|ref|ZP_04925111.1| conserved hypothetical protein [... 79.7 1e-13
gi|284990201|ref|YP_003408755.1| hypothetical protein Gobs_1668 ... 74.3 6e-12
gi|15609146|ref|NP_216525.1| hypothetical protein Rv2009 [Mycoba... 70.9 6e-11
gi|31793189|ref|NP_855682.1| hypothetical protein Mb2032 [Mycoba... 70.5 8e-11
gi|167970462|ref|ZP_02552739.1| hypothetical protein MtubH3_2149... 70.1 1e-10
gi|217979807|ref|YP_002363954.1| hypothetical protein Msil_3709 ... 62.0 3e-08
gi|325292386|ref|YP_004278250.1| hypothetical protein AGROH133_0... 62.0 3e-08
gi|336179604|ref|YP_004584979.1| hypothetical protein FsymDg_378... 61.2 5e-08
gi|335034130|ref|ZP_08527491.1| hypothetical protein AGRO_1470 [... 60.1 1e-07
gi|209548904|ref|YP_002280821.1| hypothetical protein Rleg2_1301... 60.1 1e-07
gi|327190277|gb|EGE57377.1| hypothetical protein RHECNPAF_439009... 59.3 2e-07
gi|320105489|ref|YP_004181079.1| hypothetical protein AciPR4_024... 58.5 3e-07
gi|159184572|ref|NP_354029.2| hypothetical protein Atu1005 [Agro... 58.2 4e-07
gi|218661252|ref|ZP_03517182.1| hypothetical protein RetlI_17778... 57.8 6e-07
gi|284038009|ref|YP_003387939.1| hypothetical protein Slin_3129 ... 54.7 4e-06
gi|345302429|ref|YP_004824331.1| hypothetical protein Rhom172_05... 54.7 4e-06
gi|268316119|ref|YP_003289838.1| hypothetical protein Rmar_0549 ... 53.5 1e-05
gi|296166367|ref|ZP_06848802.1| toxin-antitoxin system [Mycobact... 53.1 1e-05
gi|149197027|ref|ZP_01874080.1| hypothetical protein LNTAR_11491... 53.1 1e-05
gi|299135986|ref|ZP_07029170.1| Protein of unknown function DUF2... 52.8 2e-05
gi|258592452|emb|CBE68761.1| conserved protein of unknown functi... 52.4 2e-05
gi|333984776|ref|YP_004513986.1| hypothetical protein Metme_3109... 51.6 4e-05
gi|206889882|ref|YP_002249459.1| hypothetical protein THEYE_A166... 50.8 6e-05
gi|163759143|ref|ZP_02166229.1| hypothetical protein HPDFL43_052... 50.4 9e-05
gi|120555168|ref|YP_959519.1| hypothetical protein Maqu_2253 [Ma... 50.1 1e-04
gi|304311162|ref|YP_003810760.1| hypothetical protein HDN1F_1525... 49.3 2e-04
gi|330990375|ref|ZP_08314340.1| hypothetical protein SXCC_00293 ... 48.9 2e-04
gi|337281344|ref|YP_004620816.1| hypothetical protein Rta_36810 ... 47.4 6e-04
gi|330990312|ref|ZP_08314283.1| hypothetical protein SXCC_00236 ... 47.4 6e-04
gi|87124673|ref|ZP_01080521.1| hypothetical protein RS9917_00587... 47.4 7e-04
gi|318040454|ref|ZP_07972410.1| hypothetical protein SCB01_02055... 46.6 0.001
gi|340778974|ref|ZP_08698917.1| hypothetical protein AaceN1_1404... 46.6 0.001
gi|334346321|ref|YP_004554873.1| hypothetical protein Sphch_2724... 46.6 0.001
gi|77163945|ref|YP_342470.1| hypothetical protein Noc_0414 [Nitr... 46.6 0.001
gi|326798942|ref|YP_004316761.1| hypothetical protein Sph21_1529... 46.2 0.001
gi|325980842|ref|YP_004293245.1| hypothetical protein NAL212_012... 46.2 0.001
gi|300115207|ref|YP_003761782.1| hypothetical protein Nwat_2690 ... 45.8 0.002
gi|87302200|ref|ZP_01085025.1| hypothetical protein WH5701_08364... 45.1 0.003
gi|304312191|ref|YP_003811789.1| hypothetical protein HDN1F_2563... 45.1 0.003
gi|116626106|ref|YP_828262.1| hypothetical protein Acid_7064 [Ca... 45.1 0.004
gi|167644803|ref|YP_001682466.1| hypothetical protein Caul_0837 ... 44.7 0.004
gi|292491387|ref|YP_003526826.1| hypothetical protein Nhal_1287 ... 44.7 0.005
gi|88813609|ref|ZP_01128840.1| hypothetical protein NB231_12876 ... 44.7 0.005
gi|15828026|ref|NP_302289.1| hypothetical protein ML1911A [Mycob... 44.3 0.006
gi|332663864|ref|YP_004446652.1| hypothetical protein Halhy_1894... 44.3 0.006
>gi|15608698|ref|NP_216076.1| hypothetical protein Rv1560 [Mycobacterium tuberculosis H37Rv]
gi|15841027|ref|NP_336064.1| hypothetical protein MT1611 [Mycobacterium tuberculosis CDC1551]
gi|31792745|ref|NP_855238.1| hypothetical protein Mb1586 [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=72
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/72 (99%), Positives = 72/72 (100%), Gaps = 0/72 (0%)
Query 1 VYRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWE 60
+YRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWE
Sbjct 1 MYRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWE 60
Query 61 GDLDDLRSDRPD 72
GDLDDLRSDRPD
Sbjct 61 GDLDDLRSDRPD 72
>gi|289761723|ref|ZP_06521101.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709229|gb|EFD73245.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=72
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/72 (98%), Positives = 71/72 (99%), Gaps = 0/72 (0%)
Query 1 VYRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWE 60
+YRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLV SPLSREFLLGLEGVGWE
Sbjct 1 MYRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVRSPLSREFLLGLEGVGWE 60
Query 61 GDLDDLRSDRPD 72
GDLDDLRSDRPD
Sbjct 61 GDLDDLRSDRPD 72
>gi|167967386|ref|ZP_02549663.1| hypothetical protein MtubH3_04852 [Mycobacterium tuberculosis
H37Ra]
gi|254550580|ref|ZP_05141027.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=67
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/67 (100%), Positives = 67/67 (100%), Gaps = 0/67 (0%)
Query 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDD 65
MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDD
Sbjct 1 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDD 60
Query 66 LRSDRPD 72
LRSDRPD
Sbjct 61 LRSDRPD 67
>gi|333989208|ref|YP_004521822.1| hypothetical protein JDM601_0568 [Mycobacterium sp. JDM601]
gi|333485176|gb|AEF34568.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=70
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/66 (82%), Positives = 64/66 (97%), Gaps = 0/66 (0%)
Query 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDD 65
M+RTNI+IDDEL AEVMRRFG+TTK+AAVDLALRRLVG+PL+REFLLGLEG+GW GDLD+
Sbjct 1 MARTNIEIDDELTAEVMRRFGVTTKKAAVDLALRRLVGAPLTREFLLGLEGIGWAGDLDE 60
Query 66 LRSDRP 71
LRS++P
Sbjct 61 LRSEQP 66
>gi|297563900|ref|YP_003682873.1| Protein of unknown function DUF2191 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848349|gb|ADH70367.1| Protein of unknown function DUF2191 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=73
Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/62 (70%), Positives = 53/62 (86%), Gaps = 0/62 (0%)
Query 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDD 65
MSRTNIDIDDEL M RF ++TKR AVD+ALRR VG+PL++EFLL LEG+GWEGDL++
Sbjct 1 MSRTNIDIDDELVTTAMERFQVSTKREAVDIALRRAVGTPLTKEFLLSLEGIGWEGDLEE 60
Query 66 LR 67
+R
Sbjct 61 MR 62
>gi|254231784|ref|ZP_04925111.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|124600843|gb|EAY59853.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=41
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/41 (100%), Positives = 41/41 (100%), Gaps = 0/41 (0%)
Query 32 AAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLRSDRPD 72
AAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLRSDRPD
Sbjct 1 AAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLRSDRPD 41
>gi|284990201|ref|YP_003408755.1| hypothetical protein Gobs_1668 [Geodermatophilus obscurus DSM
43160]
gi|284063446|gb|ADB74384.1| Protein of unknown function DUF2191 [Geodermatophilus obscurus
DSM 43160]
Length=81
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/68 (53%), Positives = 49/68 (73%), Gaps = 0/68 (0%)
Query 1 VYRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWE 60
+Y C+SRTNIDIDD+L A VMRR+GL TK+ AVD ALR++ P++ + + G GW
Sbjct 1 MYGRCVSRTNIDIDDDLIAGVMRRYGLATKKDAVDFALRQVSVVPMTAREMHAMRGSGWG 60
Query 61 GDLDDLRS 68
DL+DLR+
Sbjct 61 ADLEDLRT 68
>gi|15609146|ref|NP_216525.1| hypothetical protein Rv2009 [Mycobacterium tuberculosis H37Rv]
gi|15841491|ref|NP_336528.1| hypothetical protein MT2064.1 [Mycobacterium tuberculosis CDC1551]
gi|148661823|ref|YP_001283346.1| hypothetical protein MRA_2025 [Mycobacterium tuberculosis H37Ra]
44 more sequence titles
Length=80
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/68 (53%), Positives = 48/68 (71%), Gaps = 0/68 (0%)
Query 1 VYRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWE 60
+Y +SRTNI+IDDEL A R + L +KR+AVDLALRRLVG PL R+ L L+G G++
Sbjct 1 MYSGVVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFD 60
Query 61 GDLDDLRS 68
D++ S
Sbjct 61 FSNDEIES 68
>gi|31793189|ref|NP_855682.1| hypothetical protein Mb2032 [Mycobacterium bovis AF2122/97]
gi|121637893|ref|YP_978116.1| hypothetical protein BCG_2026 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990387|ref|YP_002645074.1| hypothetical protein JTY_2021 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31618781|emb|CAD96885.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493540|emb|CAL72014.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773500|dbj|BAH26306.1| hypothetical protein JTY_2021 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601930|emb|CCC64604.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=80
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/68 (53%), Positives = 48/68 (71%), Gaps = 0/68 (0%)
Query 1 VYRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWE 60
+Y +SRTNI+IDDEL A R + L +KR+AVDLALRRLVG PL R+ L L+G G++
Sbjct 1 MYSGVVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFD 60
Query 61 GDLDDLRS 68
D++ S
Sbjct 61 FSDDEIES 68
>gi|167970462|ref|ZP_02552739.1| hypothetical protein MtubH3_21498 [Mycobacterium tuberculosis
H37Ra]
gi|254551032|ref|ZP_05141479.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|308232003|ref|ZP_07414583.2| antitoxin [Mycobacterium tuberculosis SUMu001]
23 more sequence titles
Length=75
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/63 (58%), Positives = 46/63 (74%), Gaps = 0/63 (0%)
Query 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDD 65
MSRTNI+IDDEL A R + L +KR+AVDLALRRLVG PL R+ L L+G G++ D+
Sbjct 1 MSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDE 60
Query 66 LRS 68
+ S
Sbjct 61 IES 63
>gi|217979807|ref|YP_002363954.1| hypothetical protein Msil_3709 [Methylocella silvestris BL2]
gi|217505183|gb|ACK52592.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length=70
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/67 (53%), Positives = 43/67 (65%), Gaps = 3/67 (4%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI+IDDEL AE M GL+TK+A V+ ALR LV R + + G+GW+GDLD R
Sbjct 2 RTNIEIDDELLAEAMAATGLSTKKATVEEALRALVRQKRQRRAIADMIGLGWQGDLDASR 61
Query 68 ---SDRP 71
SD P
Sbjct 62 QGGSDHP 68
>gi|325292386|ref|YP_004278250.1| hypothetical protein AGROH133_04985 [Agrobacterium sp. H13-3]
gi|325060239|gb|ADY63930.1| hypothetical protein AGROH133_04985 [Agrobacterium sp. H13-3]
Length=76
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/62 (54%), Positives = 43/62 (70%), Gaps = 0/62 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI++DD L AE M GL+TK+A V+ ALR LV L LEG+GWEG+LD++R
Sbjct 2 RTNIELDDALIAEAMEITGLSTKKATVEKALRDLVRIHRQMRALDALEGMGWEGNLDEMR 61
Query 68 SD 69
+D
Sbjct 62 TD 63
>gi|336179604|ref|YP_004584979.1| hypothetical protein FsymDg_3781 [Frankia symbiont of Datisca
glomerata]
gi|334860584|gb|AEH11058.1| Protein of unknown function DUF2191 [Frankia symbiont of Datisca
glomerata]
Length=102
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (65%), Gaps = 0/62 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
R +I +DDEL E MR FG+ T+R VDLALR L+G R L +EG GW+ D+ +LR
Sbjct 7 RASIAVDDELIEEAMRLFGVNTRREIVDLALRHLIGRADFRRRALAMEGTGWDTDMTELR 66
Query 68 SD 69
D
Sbjct 67 PD 68
>gi|335034130|ref|ZP_08527491.1| hypothetical protein AGRO_1470 [Agrobacterium sp. ATCC 31749]
gi|333794448|gb|EGL65784.1| hypothetical protein AGRO_1470 [Agrobacterium sp. ATCC 31749]
Length=89
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/60 (54%), Positives = 41/60 (69%), Gaps = 0/60 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI++DD L AE M GL+TK+A V+ ALR LV L LEG+GWEG+LD++R
Sbjct 15 RTNIELDDALIAEAMEITGLSTKKATVEKALRDLVRIHRQMRALDALEGMGWEGNLDEMR 74
>gi|209548904|ref|YP_002280821.1| hypothetical protein Rleg2_1301 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534660|gb|ACI54595.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length=69
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 40/65 (62%), Gaps = 0/65 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RT IDIDD L M GL TK AAV+ ALR L+ + + L G+GWEGDL++ R
Sbjct 2 RTTIDIDDGLLDAAMIVTGLATKEAAVEQALRNLIEKHRRKNAIADLAGIGWEGDLEEKR 61
Query 68 SDRPD 72
D+PD
Sbjct 62 CDQPD 66
>gi|327190277|gb|EGE57377.1| hypothetical protein RHECNPAF_439009 [Rhizobium etli CNPAF512]
Length=71
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 40/65 (62%), Gaps = 0/65 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RT IDIDD L M GL TK A V+LALR LV + + L G+GWEG+LD++
Sbjct 4 RTTIDIDDGLLDAAMIAAGLVTKEATVELALRNLVERHRRKNAIADLAGIGWEGELDEMP 63
Query 68 SDRPD 72
D+PD
Sbjct 64 CDQPD 68
>gi|320105489|ref|YP_004181079.1| hypothetical protein AciPR4_0247 [Terriglobus saanensis SP1PR4]
gi|319924010|gb|ADV81085.1| Protein of unknown function DUF2191 [Terriglobus saanensis SP1PR4]
Length=70
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/68 (55%), Positives = 44/68 (65%), Gaps = 5/68 (7%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALR--RLVGSPLSREFLLGLEGVGWEGDLDD 65
RTNI+IDD L +VMRR L TKRAAVD ALR + V S + L G + WEGDLD+
Sbjct 2 RTNIEIDDALIKQVMRRGKLPTKRAAVDAALRLMKQVQSQAKVQKLWG--KIPWEGDLDE 59
Query 66 LRSDR-PD 72
+R R PD
Sbjct 60 MRKSRFPD 67
>gi|159184572|ref|NP_354029.2| hypothetical protein Atu1005 [Agrobacterium tumefaciens str.
C58]
gi|159139876|gb|AAK86814.2| conserved hypothetical protein [Agrobacterium tumefaciens str.
C58]
Length=76
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (52%), Positives = 42/60 (70%), Gaps = 0/60 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI++DD L AE M GL TK+A V+ ALR LV + R+ L L G+GW+GDL+++R
Sbjct 2 RTNIELDDALIAEAMEITGLPTKKATVEKALRDLVENLGRRKALQELRGIGWKGDLEEVR 61
>gi|218661252|ref|ZP_03517182.1| hypothetical protein RetlI_17778 [Rhizobium etli IE4771]
Length=92
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/70 (46%), Positives = 42/70 (60%), Gaps = 0/70 (0%)
Query 3 RWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGD 62
R + R IDIDD L M GL T+ A V+LALR LV + + L G+GWEG+
Sbjct 20 RGVIMRMTIDIDDGLLDAAMIATGLATREAMVELALRNLVERHRRKNAIADLAGLGWEGE 79
Query 63 LDDLRSDRPD 72
LD++R D+PD
Sbjct 80 LDEIRRDQPD 89
>gi|284038009|ref|YP_003387939.1| hypothetical protein Slin_3129 [Spirosoma linguale DSM 74]
gi|283817302|gb|ADB39140.1| Protein of unknown function DUF2191 [Spirosoma linguale DSM 74]
Length=71
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/63 (51%), Positives = 44/63 (70%), Gaps = 2/63 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNIDIDDEL + ++ L TK+A V+LAL++ + +R+ LL L G V WEGDLD +
Sbjct 2 RTNIDIDDELIDKALQISRLKTKKAVVELALQQYIERQ-ARQNLLSLFGKVKWEGDLDQM 60
Query 67 RSD 69
R+D
Sbjct 61 RTD 63
>gi|345302429|ref|YP_004824331.1| hypothetical protein Rhom172_0553 [Rhodothermus marinus SG0.5JP17-172]
gi|345111662|gb|AEN72494.1| Protein of unknown function DUF2191 [Rhodothermus marinus SG0.5JP17-172]
Length=70
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/66 (52%), Positives = 45/66 (69%), Gaps = 2/66 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RT+I+IDDEL +V+R GL TKR AV+L LR L+ +E + G + WEGDLD L
Sbjct 2 RTSIEIDDELMRKVLRVTGLKTKREAVELGLRTLLRLK-QQERIKDFRGKLRWEGDLDVL 60
Query 67 RSDRPD 72
R+DRP+
Sbjct 61 RTDRPE 66
>gi|268316119|ref|YP_003289838.1| hypothetical protein Rmar_0549 [Rhodothermus marinus DSM 4252]
gi|262333653|gb|ACY47450.1| conserved hypothetical protein [Rhodothermus marinus DSM 4252]
Length=70
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (69%), Gaps = 2/66 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RT+I+IDDEL +V+R GL TKR A++L LR L+ +E + G + WEGDLD L
Sbjct 2 RTSIEIDDELMRKVLRVTGLKTKREAMELGLRTLLRLK-QQERIKDFRGKLRWEGDLDVL 60
Query 67 RSDRPD 72
R+DRP+
Sbjct 61 RTDRPE 66
>gi|296166367|ref|ZP_06848802.1| toxin-antitoxin system [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898277|gb|EFG77848.1| toxin-antitoxin system [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=70
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (44%), Positives = 40/62 (65%), Gaps = 3/62 (4%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI+++D +M R+G+ TK AVDLALR L G P++R+ L + GV +D++
Sbjct 5 RTNIELEDTYIQTIMDRYGVRTKTEAVDLALRHLAGQPMTRDEALAMRGVRA---IDEIP 61
Query 68 SD 69
SD
Sbjct 62 SD 63
>gi|149197027|ref|ZP_01874080.1| hypothetical protein LNTAR_11491 [Lentisphaera araneosa HTCC2155]
gi|149140137|gb|EDM28537.1| hypothetical protein LNTAR_11491 [Lentisphaera araneosa HTCC2155]
Length=66
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (44%), Positives = 43/67 (65%), Gaps = 2/67 (2%)
Query 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLD 64
MSRTNI +DD+L + M G+ TK++ VD AL+ L+ ++ LL L+G + W GDL
Sbjct 1 MSRTNIVLDDDLVKDCMNATGIKTKKSLVDYALKELLRKN-KQKRLLDLQGKINWTGDLK 59
Query 65 DLRSDRP 71
++R RP
Sbjct 60 EMRKGRP 66
>gi|299135986|ref|ZP_07029170.1| Protein of unknown function DUF2191 [Acidobacterium sp. MP5ACTX8]
gi|298602110|gb|EFI58264.1| Protein of unknown function DUF2191 [Acidobacterium sp. MP5ACTX8]
Length=67
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (68%), Gaps = 2/64 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNI+IDD+L AE +R G TKRAAV+ ALR L+ + ++ + L G + WEGDL +L
Sbjct 2 RTNIEIDDQLMAEALRSSGEPTKRAAVEAALRLLIQTK-AQGGIRKLRGKIQWEGDLAEL 60
Query 67 RSDR 70
R R
Sbjct 61 RRSR 64
>gi|258592452|emb|CBE68761.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=66
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 41/67 (62%), Gaps = 2/67 (2%)
Query 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLD 64
M RTNI++D+EL E M+ L TK+ V+ AL+ LV + R LL EG V WEG+L
Sbjct 1 MLRTNIELDEELVNEAMKLTHLKTKKELVNYALKELV-RKVKRRDLLSFEGKVKWEGNLY 59
Query 65 DLRSDRP 71
++R R
Sbjct 60 EMRKSRA 66
>gi|333984776|ref|YP_004513986.1| hypothetical protein Metme_3109 [Methylomonas methanica MC09]
gi|333808817|gb|AEG01487.1| Protein of unknown function DUF2191 [Methylomonas methanica MC09]
Length=71
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/64 (46%), Positives = 42/64 (66%), Gaps = 2/64 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTN+ IDD L A+V+ G+ TKR AV+L L+ L+ +E + +G + WEG+LD +
Sbjct 2 RTNVSIDDTLMADVLAATGVKTKREAVELGLKTLLMLK-QQEAIKAFKGKLKWEGNLDQM 60
Query 67 RSDR 70
RSDR
Sbjct 61 RSDR 64
>gi|206889882|ref|YP_002249459.1| hypothetical protein THEYE_A1668 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741820|gb|ACI20877.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length=67
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (41%), Positives = 42/66 (64%), Gaps = 2/66 (3%)
Query 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLD 64
M RTNI++D+++ E M + TK+ ++ A+ LV L R+ +L LEG V WEG+LD
Sbjct 1 MRRTNIELDEKILKEAMELTKMKTKKDVINFAISELV-KKLKRKKILELEGKVQWEGNLD 59
Query 65 DLRSDR 70
++R R
Sbjct 60 EMREGR 65
>gi|163759143|ref|ZP_02166229.1| hypothetical protein HPDFL43_05245 [Hoeflea phototrophica DFL-43]
gi|162283547|gb|EDQ33832.1| hypothetical protein HPDFL43_05245 [Hoeflea phototrophica DFL-43]
Length=65
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (63%), Gaps = 1/64 (1%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNI+IDDEL E+M+ G TKR VD ALR + + + +L L+G V WE D L
Sbjct 2 RTNIEIDDELVTELMKLTGRKTKRQVVDDALRDHLRRRRAAQAILDLQGTVEWEEDPGSL 61
Query 67 RSDR 70
RSDR
Sbjct 62 RSDR 65
>gi|120555168|ref|YP_959519.1| hypothetical protein Maqu_2253 [Marinobacter aquaeolei VT8]
gi|120325017|gb|ABM19332.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
Length=64
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/61 (45%), Positives = 37/61 (61%), Gaps = 0/61 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI IDD+L AE ++ G TK+ AV+ L+ LV +E + WEGDLD++R
Sbjct 2 RTNIVIDDQLMAEALKASGYETKKEAVEQGLKLLVQLSKQQEIRKLRGKIKWEGDLDEMR 61
Query 68 S 68
S
Sbjct 62 S 62
>gi|304311162|ref|YP_003810760.1| hypothetical protein HDN1F_15250 [gamma proteobacterium HdN1]
gi|301796895|emb|CBL45108.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length=64
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/64 (46%), Positives = 41/64 (65%), Gaps = 2/64 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNI IDDEL A ++ GL TK+ V+ L+ L+ S++ + GL G V WEGDLD++
Sbjct 2 RTNIVIDDELMATALKASGLQTKKEVVEQGLKLLI-RLKSQQAIRGLRGKVKWEGDLDEM 60
Query 67 RSDR 70
R +
Sbjct 61 RGGK 64
>gi|330990375|ref|ZP_08314340.1| hypothetical protein SXCC_00293 [Gluconacetobacter sp. SXCC-1]
gi|329762555|gb|EGG79034.1| hypothetical protein SXCC_00293 [Gluconacetobacter sp. SXCC-1]
Length=69
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (44%), Positives = 37/62 (60%), Gaps = 0/62 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI IDD L + ++ G+ TK+ AV+L LR L+ RE + W+GDLD +R
Sbjct 7 RTNIIIDDALMTDALKASGVKTKKEAVELGLRTLIRLKQQRELRTLRGKLDWQGDLDAMR 66
Query 68 SD 69
SD
Sbjct 67 SD 68
>gi|337281344|ref|YP_004620816.1| hypothetical protein Rta_36810 [Ramlibacter tataouinensis TTB310]
gi|334732421|gb|AEG94797.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length=101
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query 7 SRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG 56
+RTNI +DDEL A+ M R G+ TK+AAV+ ALR V P LL LEG
Sbjct 3 TRTNIVLDDELVAQAMARAGVKTKKAAVEAALRAYVRKP-DYSGLLALEG 51
>gi|330990312|ref|ZP_08314283.1| hypothetical protein SXCC_00236 [Gluconacetobacter sp. SXCC-1]
gi|329762616|gb|EGG79089.1| hypothetical protein SXCC_00236 [Gluconacetobacter sp. SXCC-1]
Length=64
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/63 (45%), Positives = 41/63 (66%), Gaps = 2/63 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNI IDD L + ++ G+ TK+ AV+L LR L+ R+ L ++G + W+GDLD +
Sbjct 2 RTNIIIDDTLMTDALKASGVKTKKEAVELGLRTLIRLNQQRQ-LRSMKGRLEWQGDLDAM 60
Query 67 RSD 69
RSD
Sbjct 61 RSD 63
>gi|87124673|ref|ZP_01080521.1| hypothetical protein RS9917_00587 [Synechococcus sp. RS9917]
gi|86167552|gb|EAQ68811.1| hypothetical protein RS9917_00587 [Synechococcus sp. RS9917]
Length=74
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/66 (47%), Positives = 37/66 (57%), Gaps = 1/66 (1%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI IDD+L + M+ G TKR AV+ LR LV + + WEGDLDD R
Sbjct 2 RTNIVIDDQLMRDAMQASGARTKREAVERGLRTLVRLEQQQHIKAFRGKLIWEGDLDDSR 61
Query 68 -SDRPD 72
S RPD
Sbjct 62 MSHRPD 67
>gi|318040454|ref|ZP_07972410.1| hypothetical protein SCB01_02055 [Synechococcus sp. CB0101]
Length=72
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 39/63 (62%), Gaps = 2/63 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNI I+D+L + M+ G TKR AV+L LR LV R+ + G G + WEGDL+
Sbjct 2 RTNIVIEDQLMRDAMQACGARTKREAVELGLRTLVQLEQQRQ-IKGFRGRLRWEGDLEAQ 60
Query 67 RSD 69
RSD
Sbjct 61 RSD 63
>gi|340778974|ref|ZP_08698917.1| hypothetical protein AaceN1_14041 [Acetobacter aceti NBRC 14818]
Length=64
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (45%), Positives = 40/63 (64%), Gaps = 2/63 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNI IDD L + ++ G+ TK+ AV+L LR L+ R+ L ++G + W GDLD +
Sbjct 2 RTNIIIDDTLMTDALKASGVKTKKEAVELGLRTLIKLYQQRQ-LRSMKGRLEWRGDLDAM 60
Query 67 RSD 69
RSD
Sbjct 61 RSD 63
>gi|334346321|ref|YP_004554873.1| hypothetical protein Sphch_2724 [Sphingobium chlorophenolicum
L-1]
gi|334102943|gb|AEG50367.1| Protein of unknown function DUF2191 [Sphingobium chlorophenolicum
L-1]
Length=64
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/61 (50%), Positives = 38/61 (63%), Gaps = 2/61 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNI IDD+L A +R G TKR AV+ LR L+ + S+ L G G + WEGDLD +
Sbjct 2 RTNIVIDDDLMANALRATGFKTKREAVEAGLRLLL-TLQSQAKLRGARGKLAWEGDLDTM 60
Query 67 R 67
R
Sbjct 61 R 61
>gi|77163945|ref|YP_342470.1| hypothetical protein Noc_0414 [Nitrosococcus oceani ATCC 19707]
gi|76882259|gb|ABA56940.1| hypothetical protein Noc_0414 [Nitrosococcus oceani ATCC 19707]
Length=92
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query 2 YRWCMSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWE 60
Y RTNI IDD+L AE ++ GL TK+ AV+ L+ LV ++ + L G + WE
Sbjct 24 YTHTPMRTNIVIDDKLMAEALKATGLRTKKEAVEEGLKLLVKRN-KQQAIRKLRGKLHWE 82
Query 61 GDLDDLRSDR 70
GDL++LR +
Sbjct 83 GDLEELRGGK 92
>gi|326798942|ref|YP_004316761.1| hypothetical protein Sph21_1529 [Sphingobacterium sp. 21]
gi|326549706|gb|ADZ78091.1| Protein of unknown function DUF2191 [Sphingobacterium sp. 21]
Length=63
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (41%), Positives = 39/62 (63%), Gaps = 2/62 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVG-WEGDLDDL 66
RTNI++D+ L + ++ L TK+ V AL++ + S L R+ ++ L G WEGDLD +
Sbjct 2 RTNIELDENLIQQALQISKLRTKKEVVHEALKQYIAS-LKRKSIIALRKKGTWEGDLDQM 60
Query 67 RS 68
RS
Sbjct 61 RS 62
>gi|325980842|ref|YP_004293245.1| hypothetical protein NAL212_0123 [Nitrosomonas sp. AL212]
gi|325533347|gb|ADZ28066.1| Protein of unknown function DUF2191 [Nitrosomonas sp. AL212]
Length=64
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (42%), Positives = 38/63 (61%), Gaps = 0/63 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI IDD+L EV++ G TK+ AV+L L L+ + + W+GDL+D+R
Sbjct 2 RTNIVIDDKLMDEVIKLTGAKTKKEAVELGLLTLLRIKKQEKIRCYRGKLAWDGDLNDMR 61
Query 68 SDR 70
+DR
Sbjct 62 TDR 64
>gi|300115207|ref|YP_003761782.1| hypothetical protein Nwat_2690 [Nitrosococcus watsonii C-113]
gi|299541144|gb|ADJ29461.1| Protein of unknown function DUF2191 [Nitrosococcus watsonii C-113]
Length=64
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (44%), Positives = 41/64 (65%), Gaps = 2/64 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNI IDD+L AE ++ GL TK+ AV+ L+ LV ++ + L G + WEGDL++L
Sbjct 2 RTNIVIDDKLMAEALKATGLRTKKEAVEEGLKLLVKRN-KQQAIRKLRGKLHWEGDLEEL 60
Query 67 RSDR 70
R +
Sbjct 61 RGGK 64
>gi|87302200|ref|ZP_01085025.1| hypothetical protein WH5701_08364 [Synechococcus sp. WH 5701]
gi|87283125|gb|EAQ75081.1| hypothetical protein WH5701_08364 [Synechococcus sp. WH 5701]
Length=72
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (42%), Positives = 36/63 (58%), Gaps = 0/63 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI IDD+L + M+ G TKR AV++ LR LV + + WEG+L+ LR
Sbjct 2 RTNIVIDDQLMRDAMQASGARTKREAVEIGLRTLVRLEQQKRIRAFRGRLSWEGNLESLR 61
Query 68 SDR 70
D+
Sbjct 62 QDQ 64
>gi|304312191|ref|YP_003811789.1| hypothetical protein HDN1F_25630 [gamma proteobacterium HdN1]
gi|301797924|emb|CBL46146.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length=63
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (41%), Positives = 36/62 (59%), Gaps = 0/62 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI IDD L E ++ G TK+ AV+L L+ L+ + + WEGDLD++R
Sbjct 2 RTNIVIDDTLMEEAIKLTGAKTKKDAVELGLKTLIRLKKQEKIRAYRGKLKWEGDLDEMR 61
Query 68 SD 69
S+
Sbjct 62 SN 63
>gi|116626106|ref|YP_828262.1| hypothetical protein Acid_7064 [Candidatus Solibacter usitatus
Ellin6076]
gi|116229268|gb|ABJ87977.1| conserved hypothetical protein [Candidatus Solibacter usitatus
Ellin6076]
Length=64
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 39/64 (61%), Gaps = 4/64 (6%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRL--VGSPLSREFLLGLEGVGWEGDLDD 65
RTNI IDD+L E +R GL TKR AV+L L+ L +G L G + W+GDLD
Sbjct 2 RTNIVIDDKLMREALRVTGLKTKRDAVELGLQTLLRLGRQAQIRRLRG--KLKWQGDLDA 59
Query 66 LRSD 69
+R+D
Sbjct 60 MRTD 63
>gi|167644803|ref|YP_001682466.1| hypothetical protein Caul_0837 [Caulobacter sp. K31]
gi|167347233|gb|ABZ69968.1| conserved hypothetical protein [Caulobacter sp. K31]
Length=64
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/62 (44%), Positives = 37/62 (60%), Gaps = 0/62 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI IDD L A+ ++ GL TKR AV+L L+ L+ ++ + WEGDL LR
Sbjct 2 RTNIVIDDALMADTLKATGLKTKREAVELGLQTLLRLRRQQDIRQLRGKLAWEGDLATLR 61
Query 68 SD 69
+D
Sbjct 62 TD 63
>gi|292491387|ref|YP_003526826.1| hypothetical protein Nhal_1287 [Nitrosococcus halophilus Nc4]
gi|291579982|gb|ADE14439.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
Length=71
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 40/64 (63%), Gaps = 2/64 (3%)
Query 7 SRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDD 65
RTNI ID EL + +R GL T+R VD ALR L+ +++ LL L+G V WEGDL
Sbjct 6 QRTNIVIDPELIEQGLRVTGLKTRRELVDFALRELLRRE-NQKKLLELKGQVEWEGDLGA 64
Query 66 LRSD 69
+R +
Sbjct 65 MRGE 68
>gi|88813609|ref|ZP_01128840.1| hypothetical protein NB231_12876 [Nitrococcus mobilis Nb-231]
gi|88789114|gb|EAR20250.1| hypothetical protein NB231_12876 [Nitrococcus mobilis Nb-231]
Length=64
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/62 (41%), Positives = 36/62 (59%), Gaps = 0/62 (0%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEGVGWEGDLDDLR 67
RTNI IDD+L +R GL TKR V+LAL+ L+ + + W+GDL+ +R
Sbjct 2 RTNIVIDDKLMERALRLTGLKTKREVVELALQTLLRLRQQEQVKQFRGKLNWQGDLETMR 61
Query 68 SD 69
+D
Sbjct 62 ND 63
>gi|15828026|ref|NP_302289.1| hypothetical protein ML1911A [Mycobacterium leprae TN]
gi|221230503|ref|YP_002503919.1| hypothetical protein MLBr_01911A [Mycobacterium leprae Br4923]
gi|25397670|pir||B87148 conserved hypothetical protein ML1911A [imported] - Mycobacterium
leprae
gi|13093579|emb|CAC30866.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933610|emb|CAR72008.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=71
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/40 (48%), Positives = 29/40 (73%), Gaps = 0/40 (0%)
Query 6 MSRTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSP 45
+ + I++DD+L EV+RR+GL +R AV LAL+ L+G P
Sbjct 2 LKKVEIEVDDDLVQEVIRRYGLLGRREAVHLALKALLGEP 41
>gi|332663864|ref|YP_004446652.1| hypothetical protein Halhy_1894 [Haliscomenobacter hydrossis
DSM 1100]
gi|332332678|gb|AEE49779.1| Protein of unknown function DUF2191 [Haliscomenobacter hydrossis
DSM 1100]
Length=64
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/64 (44%), Positives = 39/64 (61%), Gaps = 2/64 (3%)
Query 8 RTNIDIDDELAAEVMRRFGLTTKRAAVDLALRRLVGSPLSREFLLGLEG-VGWEGDLDDL 66
RTNI IDD+L + + GL TK+A V+ AL +L L + L L G + WEG+LD +
Sbjct 2 RTNIVIDDQLMDQAIALSGLETKKAVVEHAL-KLYIQLLQQAALRELRGKLHWEGNLDQM 60
Query 67 RSDR 70
R D+
Sbjct 61 RQDQ 64
Lambda K H
0.323 0.142 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127392703088
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40